ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI0003.1 suspect: Pn RT KOG0598 General function prediction only Ribosomal protein S6 kinase and related proteins
r_klactVI0003.1 suspect: Pn RT KOG0598 Signal transduction mechanisms Ribosomal protein S6 kinase and related proteins
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI0003.1 34 2601932 100
(100 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
SPAC22E12.14c [RT] KOG0598 Ribosomal protein S6 kinase and relat... 28 2.8
Hs7662222 [T] KOG3572 Uncharacterized conserved protein contains... 28 2.8
7297611 [T] KOG0614 cGMP-dependent protein kinase 28 2.8
YJL069c [R] KOG2055 WD40 repeat protein 27 3.7
Hs4505203 [E] KOG3624 M13 family peptidase 27 4.8
Hs4504019 [T] KOG3644 Ligand-gated ion channel 27 4.8
Hs22053668 [R] KOG1315 Predicted DHHC-type Zn-finger protein 27 4.8
YJR137c [P] KOG0560 Sulfite reductase (ferredoxin) 27 6.2
ECU11g0790 [U] KOG1986 Vesicle coat complex COPII subunit SEC23 27 6.2
At3g58220 [DR] KOG1987 Speckle-type POZ protein SPOP and related... 27 6.2
Hs18553928_2 [T] KOG1829 Uncharacterized conserved protein conta... 26 8.1
>SPAC22E12.14c [RT] KOG0598 Ribosomal protein S6 kinase and related proteins
Length = 646
Score = 27.7 bits (60), Expect = 2.8
Identities = 18/58 (31%), Positives = 29/58 (49%), Gaps = 3/58 (5%)
Query: 27 WGKFAQKWVN--FEYFIKSEDDI-DFESEEAYKIWDTDFMLIKKIKESTYSSKPIQNG 81
W K A K ++ F+ ++ E D+ +F+ E K D DF ++ S S +QNG
Sbjct: 532 WKKLAAKEISPPFKPIVEGEIDVSNFDVEFTNKAIDRDFSSTDEMSTSAPLSSTVQNG 589
>Hs7662222 [T] KOG3572 Uncharacterized conserved protein contains DEP domain
Length = 1572
Score = 27.7 bits (60), Expect = 2.8
Identities = 15/47 (31%), Positives = 22/47 (45%), Gaps = 6/47 (12%)
Query: 25 SLWGKFAQ------KWVNFEYFIKSEDDIDFESEEAYKIWDTDFMLI 65
S W +F+ KW + +I S DF E+ K W T F+L+
Sbjct: 894 SCWVEFSHERLEEYKWNYLDQYICSAGSEDFSLIESLKFWRTRFLLL 940
>7297611 [T] KOG0614 cGMP-dependent protein kinase
Length = 1003
Score = 27.7 bits (60), Expect = 2.8
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 32 QKWVNFEYFIKSEDDIDFESEEAYKIWDTDF 62
+ W + +YF S + D+E E WD DF
Sbjct: 973 KSWTDLQYFGPSGVENDYEPPEELSGWDKDF 1003
>YJL069c [R] KOG2055 WD40 repeat protein
Length = 594
Score = 27.3 bits (59), Expect = 3.7
Identities = 14/44 (31%), Positives = 24/44 (53%)
Query: 33 KWVNFEYFIKSEDDIDFESEEAYKIWDTDFMLIKKIKESTYSSK 76
KWV+ E + +D+ D E E + + + D + KI +TY+ K
Sbjct: 176 KWVDDESDSELDDEEDDEEEGSNNVINGDINALTKILSTTYNYK 219
>Hs4505203 [E] KOG3624 M13 family peptidase
Length = 750
Score = 26.9 bits (58), Expect = 4.8
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 34 WVNFEYFIKSEDDIDFESEEAYKIWDTDFMLIKKIKESTYSSKPIQNGVFTLSW 87
W+NF I S +I +EE ++ +++ K + YS++ +QN +SW
Sbjct: 323 WLNFTNEIMSTVNISITNEEDVVVYAPEYLTKLKPILTKYSARDLQN---LMSW 373
>Hs4504019 [T] KOG3644 Ligand-gated ion channel
Length = 449
Score = 26.9 bits (58), Expect = 4.8
Identities = 17/64 (26%), Positives = 32/64 (49%), Gaps = 5/64 (7%)
Query: 35 VNFEYFIKSEDDIDFESEEAYKIWDTDFM-----LIKKIKESTYSSKPIQNGVFTLSWAR 89
+ E F + +D+ FE +E + D + ++K+ K+ Y +K G FT AR
Sbjct: 182 MQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEAR 241
Query: 90 YHMK 93
+H++
Sbjct: 242 FHLE 245
>Hs22053668 [R] KOG1315 Predicted DHHC-type Zn-finger protein
Length = 355
Score = 26.9 bits (58), Expect = 4.8
Identities = 22/75 (29%), Positives = 33/75 (43%), Gaps = 2/75 (2%)
Query: 9 YVVCSVLENVIKIIMNSLWGKFAQKWVNFEYFIKSEDDIDFESEEAYKIW--DTDFMLIK 66
+V +VLE IK N L A+ V F +F+ + I S +Y W + I+
Sbjct: 184 FVAATVLEYFIKFWTNELTDTRAKFHVLFLFFVSAMFFISVLSLFSYHCWLVGKNRTTIE 243
Query: 67 KIKESTYSSKPIQNG 81
+ T+S P NG
Sbjct: 244 SFRAPTFSYGPDGNG 258
>YJR137c [P] KOG0560 Sulfite reductase (ferredoxin)
Length = 1442
Score = 26.6 bits (57), Expect = 6.2
Identities = 19/67 (28%), Positives = 35/67 (51%), Gaps = 4/67 (5%)
Query: 16 ENVIKIIMNSLWGKFAQKWVNFEYFIKSEDDIDFES--EEAYKIWDTDFMLIKKIKESTY 73
ENV+ I + G+F Q +F +K++ D+D S + + D+++ K+ K Y
Sbjct: 728 ENVVFITSTAGQGEFPQDGKSFWEALKNDTDLDLASLNVAVFGLGDSEYWPRKEDKH--Y 785
Query: 74 SSKPIQN 80
+KP Q+
Sbjct: 786 FNKPSQD 792
>ECU11g0790 [U] KOG1986 Vesicle coat complex COPII subunit SEC23
Length = 707
Score = 26.6 bits (57), Expect = 6.2
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 40 FIKSEDDIDFE-SEEAYKIWDTDFMLIKKIKESTYSSKPIQNGV--FTLSWARY 90
F S +D+ + +EA ++ F+L+KK +E + I + FT ++ARY
Sbjct: 461 FTDSREDVIYGFDQEAVAVFQARFLLLKKYEEIKDCERMIDKNLIRFTKTFARY 514
>At3g58220 [DR] KOG1987 Speckle-type POZ protein SPOP and related proteins
with TRAF MATH and BTB/POZ domains
Length = 487
Score = 26.6 bits (57), Expect = 6.2
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 9 YVVCSVLENVIKIIMNSLWGKFAQKWVNFEYFIKSEDDIDFESEEAYKIWDTDFMLIKKI 68
++V + V+KI + ++GK A ++ E S++ ++ESEE YK + K
Sbjct: 158 FLVSGEVTIVVKIDVYRVFGKVAAIEISEE---GSKEGYEYESEEVYKKESEEG--YKYE 212
Query: 69 KESTYSSKPIQ 79
E Y +PI+
Sbjct: 213 SEEDYEKRPIE 223
>Hs18553928_2 [T] KOG1829 Uncharacterized conserved protein contains C1 PH and
RUN domains
Length = 785
Score = 26.2 bits (56), Expect = 8.1
Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Query: 32 QKWVNFEYFIKSEDDIDFESEEAYKIWDTDFMLIKKIKESTYSSKPIQNGVFTLSWARYH 91
+KW +Y++ + F + KIW+ ++ I + Y + N V L H
Sbjct: 577 RKWDFSKYYVSN-----FSKDLLIKIWNDPLFNVQDINSALYRKVKLLNQVRLLRVQLCH 631
Query: 92 MKSI 95
MK++
Sbjct: 632 MKNM 635
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.323 0.136 0.445
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,544,837
Number of Sequences: 60738
Number of extensions: 245545
Number of successful extensions: 797
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 792
Number of HSP's gapped (non-prelim): 12
length of query: 100
length of database: 30,389,216
effective HSP length: 76
effective length of query: 24
effective length of database: 25,773,128
effective search space: 618555072
effective search space used: 618555072
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)