ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI0261 good Q KOG0142 Secondary metabolites biosynthesis, transport and catabolism Isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI0261 85633 86466 278
(278 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YPL117c [Q] KOG0142 Isopentenyl pyrophosphate:dimethylallyl pyro... 412 e-115
SPBC106.15 [Q] KOG0142 Isopentenyl pyrophosphate:dimethylallyl p... 258 5e-69
Hs4758584 [Q] KOG0142 Isopentenyl pyrophosphate:dimethylallyl py... 233 2e-61
At3g02780 [Q] KOG0142 Isopentenyl pyrophosphate:dimethylallyl py... 192 4e-49
At5g16440 [Q] KOG0142 Isopentenyl pyrophosphate:dimethylallyl py... 191 1e-48
7300729 [Q] KOG0142 Isopentenyl pyrophosphate:dimethylallyl pyro... 184 2e-46
Hs15147242 [Q] KOG0142 Isopentenyl pyrophosphate:dimethylallyl p... 182 5e-46
CE26944 [Q] KOG0142 Isopentenyl pyrophosphate:dimethylallyl pyro... 160 2e-39
Hs20481179 [Q] KOG0142 Isopentenyl pyrophosphate:dimethylallyl p... 102 8e-22
ECU02g0230 [Q] KOG0142 Isopentenyl pyrophosphate:dimethylallyl p... 86 6e-17
>YPL117c [Q] KOG0142 Isopentenyl pyrophosphate:dimethylallyl pyrophosphate
isomerase
Length = 288
Score = 412 bits (1059), Expect = e-115
Identities = 189/275 (68%), Positives = 227/275 (81%), Gaps = 2/275 (0%)
Query: 6 STYADLVHSLEQDDILEKFPEVIPLNNRPNTHSTESSGET--DNLLDGYDEEQIRLMNEN 63
S+YA LV + +DILE+FPE+IPL RPNT S+E+S + + G+DEEQI+LMNEN
Sbjct: 14 SSYAKLVQNQTPEDILEEFPEIIPLQQRPNTRSSETSNDESGETCFSGHDEEQIKLMNEN 73
Query: 64 CIVLDWNDTAIGAGTKKLCHLMENINQGLLHRAFSVFLFDSDGKLLLQQRATEKITFADL 123
CIVLDW+D AIGAGTKK+CHLMENI +GLLHRAFSVF+F+ G+LLLQQRATEKITF DL
Sbjct: 74 CIVLDWDDNAIGAGTKKVCHLMENIEKGLLHRAFSVFIFNEQGELLLQQRATEKITFPDL 133
Query: 124 WTNTCCSHPLCVDDELGLNGSLESKIEGARTAAVRKLEHELGIPPQEVESKGEFHFLNRI 183
WTNTCCSHPLC+DDELGL G L+ KI+GA TAAVRKL+HELGIP E +++G+FHFLNRI
Sbjct: 134 WTNTCCSHPLCIDDELGLKGKLDDKIKGAITAAVRKLDHELGIPEDETKTRGKFHFLNRI 193
Query: 184 HYMAPSDGAWGEHEIDYIFIYQLRKGETLTVEPSTNEVRDIAWVSQEELKQMFADGNLKF 243
HYMAPS+ WGEHEIDYI Y++ E LTV P+ NEVRD WVS +LK MFAD + KF
Sbjct: 194 HYMAPSNEPWGEHEIDYILFYKINAKENLTVNPNVNEVRDFKWVSPNDLKTMFADPSYKF 253
Query: 244 TPWFKLICDNYLFQWWNQLNDLNKVENDTKIHRMM 278
TPWFK+IC+NYLF WW QL+DL++VEND +IHRM+
Sbjct: 254 TPWFKIICENYLFNWWEQLDDLSEVENDRQIHRML 288
>SPBC106.15 [Q] KOG0142 Isopentenyl pyrophosphate:dimethylallyl pyrophosphate
isomerase
Length = 227
Score = 258 bits (660), Expect = 5e-69
Identities = 130/225 (57%), Positives = 164/225 (72%), Gaps = 8/225 (3%)
Query: 52 YDEEQIRLMNENCIVLDWNDTAIGAGTKKLCHLMENINQGLLHRAFSVFLFDSDGKLLLQ 111
YDEEQ+RLM E CIV+D ND + GTKK CHLMENIN+GLLHRAFS+F+FD +LLLQ
Sbjct: 10 YDEEQLRLMEEVCIVVDENDVPLRYGTKKECHLMENINKGLLHRAFSMFIFDEQNRLLLQ 69
Query: 112 QRATEKITFADLWTNTCCSHPLCVDDELGLNGSLESKIEGARTAAVRKLEHELGIPPQEV 171
QRA EKITF LWTNTCCSHPL V E G +L +EG + AA RKL HELGI + +
Sbjct: 70 QRAEEKITFPSLWTNTCCSHPLDVAGERG--NTLPEAVEGVKNAAQRKLFHELGIQAKYI 127
Query: 172 ESKGEFHFLNRIHYMAPSDGAWGEHEIDYIFIYQLRKGETLTVEPSTNEVRDIAWVSQEE 231
K +F FL RIHY+APS GAWGEHEIDYI + KG+ + ++ + NEV+ +V+ EE
Sbjct: 128 -PKDKFQFLTRIHYLAPSTGAWGEHEIDYILFF---KGK-VELDINPNEVQAYKYVTMEE 182
Query: 232 LKQMFADGNLKFTPWFKLICDNYLFQWWNQLNDLNKVENDTKIHR 276
LK+MF+D FTPWFKLIC++++F+WW ++ +K + DT IHR
Sbjct: 183 LKEMFSDPQYGFTPWFKLICEHFMFKWWQDVDHASKFQ-DTLIHR 226
>Hs4758584 [Q] KOG0142 Isopentenyl pyrophosphate:dimethylallyl pyrophosphate
isomerase
Length = 228
Score = 233 bits (595), Expect = 2e-61
Identities = 120/228 (52%), Positives = 158/228 (68%), Gaps = 13/228 (5%)
Query: 53 DEEQIRLMNENCIVLDWNDTAIGAGTKKLCHLMENINQGLLHRAFSVFLFDSDGKLLLQQ 112
D++Q++L+ E CI++D ND IGA TKK CHL ENI +GLLHRAFSVFLF+++ KLLLQQ
Sbjct: 11 DKQQVQLLAEMCILIDENDNKIGAETKKNCHLNENIEKGLLHRAFSVFLFNTENKLLLQQ 70
Query: 113 RATEKITFADLWTNTCCSHPLCVDDELGLNGSLESKIEGARTAAVRKLEHELGIPPQEVE 172
R+ KITF +TNTCCSHPL EL ES G R AA R+L+ ELGIP +EV
Sbjct: 71 RSDAKITFPGCFTNTCCSHPLSNPAELE-----ESDALGVRRAAQRRLKAELGIPLEEVP 125
Query: 173 SKGEFHFLNRIHYMAPSDGAWGEHEIDYIFIYQLRKGETLTVEPSTNEVRDIAWVSQEEL 232
+ E ++L RIHY A SDG WGEHEIDYI + + + +T+ P NE++ +VS+EEL
Sbjct: 126 PE-EINYLTRIHYKAQSDGIWGEHEIDYILLVR----KNVTLNPDPNEIKSYCYVSKEEL 180
Query: 233 KQMF---ADGNLKFTPWFKLICDNYLFQWWNQLNDLNKVENDTKIHRM 277
K++ A G +K TPWFK+I +LF+WW+ LN LN+ + KI+RM
Sbjct: 181 KELLKKAASGEIKITPWFKIIAATFLFKWWDNLNHLNQFVDHEKIYRM 228
>At3g02780 [Q] KOG0142 Isopentenyl pyrophosphate:dimethylallyl pyrophosphate
isomerase
Length = 284
Score = 192 bits (488), Expect = 4e-49
Identities = 110/243 (45%), Positives = 148/243 (60%), Gaps = 17/243 (6%)
Query: 34 PNTHSTESSGETDNLLDGYDEEQIRLMNEN-CIVLDWNDTAIGAGTKKLCHLMENIN-QG 91
PN + + TD G D Q RLM E+ CI++D D +G +K CHLMENI +
Sbjct: 42 PNFRAFSGTAMTDTKDAGMDAVQRRLMFEDECILVDETDRVVGHDSKYNCHLMENIEAKN 101
Query: 92 LLHRAFSVFLFDSDGKLLLQQRATEKITFADLWTNTCCSHPLCVDDELGLNGSLESKIEG 151
LLHRAFSVFLF+S +LLLQQR+ K+TF +WTNTCCSHPL + EL ++ G
Sbjct: 102 LLHRAFSVFLFNSKYELLLQQRSNTKVTFPLVWTNTCCSHPLYRESEL-----IQDNALG 156
Query: 152 ARTAAVRKLEHELGIPPQEVESKGEFHFLNRIHYMAPSDGAWGEHEIDYIFIYQLRKGET 211
R AA RKL ELGI ++V EF L R+ Y APSDG WGEHE+DY+
Sbjct: 157 VRNAAQRKLLDELGIVAEDV-PVDEFTPLGRMLYKAPSDGKWGEHELDYLLFIV----RD 211
Query: 212 LTVEPSTNEVRDIAWVSQEELKQMF-----ADGNLKFTPWFKLICDNYLFQWWNQLNDLN 266
+ V+P+ +EV +I +VS+EELK++ + LK +PWF+L+ DN+L +WW+ +
Sbjct: 212 VKVQPNPDEVAEIKYVSREELKELVKKADAGEEGLKLSPWFRLVVDNFLMKWWDHVEKGT 271
Query: 267 KVE 269
VE
Sbjct: 272 LVE 274
>At5g16440 [Q] KOG0142 Isopentenyl pyrophosphate:dimethylallyl pyrophosphate
isomerase
Length = 291
Score = 191 bits (485), Expect = 1e-48
Identities = 107/225 (47%), Positives = 144/225 (63%), Gaps = 17/225 (7%)
Query: 45 TDNLLDGYDEEQIRLMNEN-CIVLDWNDTAIGAGTKKLCHLMENIN-QGLLHRAFSVFLF 102
TD+ G D Q RLM E+ CI++D ND +G TK CHLME I + LLHRAFSVFLF
Sbjct: 60 TDSNDAGMDAVQRRLMFEDECILVDENDRVVGHDTKYNCHLMEKIEAENLLHRAFSVFLF 119
Query: 103 DSDGKLLLQQRATEKITFADLWTNTCCSHPLCVDDELGLNGSLESKIEGARTAAVRKLEH 162
+S +LLLQQR+ K+TF +WTNTCCSHPL + EL +E + G R AA RKL
Sbjct: 120 NSKYELLLQQRSKTKVTFPLVWTNTCCSHPLYRESEL-----IEENVLGVRNAAQRKLFD 174
Query: 163 ELGIPPQEVESKGEFHFLNRIHYMAPSDGAWGEHEIDYIFIYQLRKGETLTVEPSTNEVR 222
ELGI ++V EF L R+ Y APSDG WGEHE+DY+ + ++P+ +EV
Sbjct: 175 ELGIVAEDV-PVDEFTPLGRMLYKAPSDGKWGEHEVDYLLFIV----RDVKLQPNPDEVA 229
Query: 223 DIAWVSQEELKQMF-----ADGNLKFTPWFKLICDNYLFQWWNQL 262
+I +VS+EELK++ D +K +PWF+L+ DN+L +WW+ +
Sbjct: 230 EIKYVSREELKELVKKADAGDEAVKLSPWFRLVVDNFLMKWWDHV 274
>7300729 [Q] KOG0142 Isopentenyl pyrophosphate:dimethylallyl pyrophosphate
isomerase
Length = 256
Score = 184 bits (466), Expect = 2e-46
Identities = 94/226 (41%), Positives = 141/226 (61%), Gaps = 10/226 (4%)
Query: 52 YDEEQIRLMNENCIVLDWNDTAIGAGTKKLCHLME-NINQGLLHRAFSVFLFDSDGKLLL 110
+D Q + E CI++D ND AIGA +K CH + N LHRAFSVFLF+S G++L+
Sbjct: 39 HDPLQAHALKEQCILVDANDQAIGAASKADCHRVHPETNDVKLHRAFSVFLFNSQGEMLV 98
Query: 111 QQRATEKITFADLWTNTCCSHPLCVDDELGLNGSLESKIEGARTAAVRKLEHELGIPPQE 170
Q+R++ KITF + +TN CCSHPL ++ E +G R AA R+L +ELGIP +E
Sbjct: 99 QKRSSHKITFPNTYTNACCSHPLYEIEQ----ERQERNAQGIRVAAQRRLNYELGIPTEE 154
Query: 171 VESKGEFHFLNRIHYMAPSDGAWGEHEIDYIFIYQLRKGETLTVEPSTNEVRDIAWVSQE 230
++ + +F +L RIHY DG WGEHEIDYI Q + +T+ P++NEV ++ ++ ++
Sbjct: 155 LQPQ-DFRYLTRIHYADTGDGVWGEHEIDYILFLQ----KDVTLRPNSNEVSEVRYLRRD 209
Query: 231 ELKQMFADGNLKFTPWFKLICDNYLFQWWNQLNDLNKVENDTKIHR 276
++ + A + TPWF LI + L WW+ L+ L + E+ + I R
Sbjct: 210 KIDEAVAKFSAPLTPWFSLILQHRLKLWWDNLHQLEQFEDLSNIQR 255
>Hs15147242 [Q] KOG0142 Isopentenyl pyrophosphate:dimethylallyl pyrophosphate
isomerase
Length = 227
Score = 182 bits (462), Expect = 5e-46
Identities = 102/236 (43%), Positives = 145/236 (61%), Gaps = 13/236 (5%)
Query: 45 TDNLLDGYDEEQIRLMNENCIVLDWNDTAIGAGTKKLCHLMENINQGLLHRAFSVFLFDS 104
+D LD D Q++ + E IV+D ND IGA TK+ CHL ENI +GLLHRAFSV LF++
Sbjct: 2 SDINLDWVDRRQLQRLEEMLIVVDENDKVIGADTKRNCHLNENIEKGLLHRAFSVVLFNT 61
Query: 105 DGKLLLQQRATEKITFADLWTNTCCSHPLCVDDELGLNGSLESKIEGARTAAVRKLEHEL 164
++L+QQR+ K+TF +T++C SHPL EL E G R AA R+L+ EL
Sbjct: 62 KNRILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELE-----EKDAIGVRRAAQRRLQAEL 116
Query: 165 GIPPQEVESKGEFHFLNRIHYMAPSDGAWGEHEIDYIFIYQLRKGETLTVEPSTNEVRDI 224
GIP +++ S + F+ H+ A SD WGEHEI Y+ + +RK TL +PS E + I
Sbjct: 117 GIPGEQI-SPEDIVFMTIYHHKAKSDRIWGEHEICYLLL--VRKNVTLNPDPS--ETKSI 171
Query: 225 AWVSQEELKQMF---ADGNLKFTPWFKLICDNYLFQWWNQLNDLNKVENDTKIHRM 277
++SQEEL ++ A G +K TPW + I + +L++WW L+D+ KIHR+
Sbjct: 172 LYLSQEELWELLEREARGEVKVTPWLRTIAERFLYRWWPHLDDVTPFVELHKIHRV 227
>CE26944 [Q] KOG0142 Isopentenyl pyrophosphate:dimethylallyl pyrophosphate
isomerase
Length = 236
Score = 160 bits (404), Expect = 2e-39
Identities = 95/231 (41%), Positives = 126/231 (54%), Gaps = 17/231 (7%)
Query: 49 LDGYDEEQIRLMNENCIVLDWNDTAIGAGTKKLCHLMENINQGLLHRAFSVFLFDSDGKL 108
L YD +Q+ M E CI +D ND IG +K+ H + Q +LHRAFSVF F SD KL
Sbjct: 20 LSSYDAQQVEYMREQCINVDENDRIIGGVSKREAH---SSYQLVLHRAFSVFSFTSDNKL 76
Query: 109 LLQQRATEKITFADLWTNTCCSHPLCVDDELGLNGSLESKIEGARTAAVRKLEHELGIPP 168
L+Q+R+ EKITF +LWTNTCCSHPL E+ + GA+ AA+RKLEHELGI
Sbjct: 77 LMQKRSAEKITFPNLWTNTCCSHPLHTQQEM-------DGVPGAKRAAIRKLEHELGITG 129
Query: 169 QEVESKGEFHFLNRIHYMAPSDGA-WGEHEIDYIFIYQLRKGETLTVEPSTNEVRDIAWV 227
S +F + Y A + A WGEHE+DY I + E + + NEV ++ V
Sbjct: 130 ---VSLNKFQMAGKYIYRAEMNNAPWGEHELDYALILRGIGAENCNI--NENEVAEVREV 184
Query: 228 SQEELKQMFADGNLKFTPWFKLICDNYLFQ-WWNQLNDLNKVENDTKIHRM 277
+ELK FTPW KL F+ WW + + DT I+++
Sbjct: 185 VLDELKLWMRKEPNSFTPWLKLFSQTETFEKWWTINKNTEESIEDTNIYKL 235
>Hs20481179 [Q] KOG0142 Isopentenyl pyrophosphate:dimethylallyl pyrophosphate
isomerase
Length = 132
Score = 102 bits (253), Expect = 8e-22
Identities = 55/119 (46%), Positives = 75/119 (62%), Gaps = 7/119 (5%)
Query: 54 EEQIRLMNENCIVLDWNDTAIGAGTKKLCHLMENINQGLLHRAFSVFLFDSDGKLLLQQR 113
E+Q++L+ + C +D ND IGA T+K CHL EN +GLLH FSVFLF++ KLLL++
Sbjct: 11 EQQVQLLADTCNPIDENDNKIGAETEKNCHLNENTERGLLHWTFSVFLFNTKNKLLLEES 70
Query: 114 ATEKITFADLWTNTCCSHPLCVDDELGLNGSLESKIE-GARTAAVRKLEHELGIPPQEV 171
+ KI+F +TNTCC HP LG +G LE + R A + L+ ELGIP + V
Sbjct: 71 SDAKISFPGCFTNTCCGHP------LGNSGKLEESDDLEVRQAVQKHLKAELGIPIEAV 123
>ECU02g0230 [Q] KOG0142 Isopentenyl pyrophosphate:dimethylallyl pyrophosphate
isomerase
Length = 229
Score = 85.9 bits (211), Expect = 6e-17
Identities = 65/221 (29%), Positives = 106/221 (47%), Gaps = 49/221 (22%)
Query: 61 NENCIVLDWNDTAIGAGTKKLCHLMENINQGLLHRAFSVFLFDSDGKLLLQQRATEKITF 120
N + ++++ D IG G H E++ LHRAFSVFLF+S G+LL+Q+RA+ K+ F
Sbjct: 5 NRDVLLVNDMDEVIGIGKALKTHFREHL---ALHRAFSVFLFNSRGELLIQRRASRKLLF 61
Query: 121 ADLWTNTCCSHPLCVDDELGLNGSLESKIEGARTAAVRKLEHELGIPPQEVESKGEFHFL 180
WTN+ CSHP D S + + A++++++ELGI ++ + F+
Sbjct: 62 PSRWTNSVCSHPFACD------LSFTDPLLDVKMHAIKRVDYELGIKDVCID---DLRFV 112
Query: 181 NRIHYMAPSDGAWG-------------------------------EHEIDYIFIYQLRKG 209
+RI Y A + +G E EIDYI L
Sbjct: 113 SRIVYKAAPNEKYGRILPGNPTPQDVSRFPDPKNLDEPYSSSDFHEWEIDYIV---LGVS 169
Query: 210 ETLTVEPSTNEVRDIAWVSQEELKQMFADGNLKFTPWFKLI 250
+T P+ +EV + +VS+EE +++ A ++ +PW I
Sbjct: 170 DT-PPSPNPDEVSETRYVSKEEFQELVAHDSV--SPWLNEI 207
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.318 0.135 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,022,249
Number of Sequences: 60738
Number of extensions: 805205
Number of successful extensions: 1969
Number of sequences better than 1.0e-05: 10
Number of HSP's better than 0.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1929
Number of HSP's gapped (non-prelim): 10
length of query: 278
length of database: 30,389,216
effective HSP length: 105
effective length of query: 173
effective length of database: 24,011,726
effective search space: 4154028598
effective search space used: 4154028598
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)