ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI0286 check: MH A KOG0335 RNA processing and modification ATP-dependent RNA helicase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI0286 93422 95302 627
(627 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YOR204w [A] KOG0335 ATP-dependent RNA helicase 723 0.0
YPL119c [A] KOG0335 ATP-dependent RNA helicase 708 0.0
SPCC1795.11 [A] KOG0335 ATP-dependent RNA helicase 609 e-174
Hs13514813 [A] KOG0335 ATP-dependent RNA helicase 522 e-148
Hs13514809 [A] KOG0335 ATP-dependent RNA helicase 521 e-147
7299061 [A] KOG0335 ATP-dependent RNA helicase 514 e-145
At2g42520 [A] KOG0335 ATP-dependent RNA helicase 491 e-138
At3g58570 [A] KOG0335 ATP-dependent RNA helicase 491 e-138
At3g58510 [A] KOG0335 ATP-dependent RNA helicase 484 e-136
CE28369 [A] KOG0335 ATP-dependent RNA helicase 451 e-126
CE24451 [A] KOG0335 ATP-dependent RNA helicase 451 e-126
Hs9507237 [A] KOG0335 ATP-dependent RNA helicase 422 e-117
7298204 [A] KOG0335 ATP-dependent RNA helicase 399 e-111
At5g63120 [A] KOG0331 ATP-dependent RNA helicase 336 7e-92
YNL112w [A] KOG0331 ATP-dependent RNA helicase 333 6e-91
SPBP8B7.16c [A] KOG0331 ATP-dependent RNA helicase 320 4e-87
At3g01540 [A] KOG0331 ATP-dependent RNA helicase 318 1e-86
CE18785 [A] KOG0331 ATP-dependent RNA helicase 315 1e-85
CE07736 [A] KOG0335 ATP-dependent RNA helicase 314 3e-85
At3g06480 [A] KOG0331 ATP-dependent RNA helicase 313 5e-85
7295314 [A] KOG0331 ATP-dependent RNA helicase 311 2e-84
CE09012 [A] KOG0335 ATP-dependent RNA helicase 309 7e-84
Hs5453840_1 [A] KOG0331 ATP-dependent RNA helicase 309 7e-84
CE25121 [A] KOG0335 ATP-dependent RNA helicase 309 9e-84
7296646 [A] KOG0331 ATP-dependent RNA helicase 307 3e-83
7290853 [A] KOG0331 ATP-dependent RNA helicase 307 3e-83
At1g55150 [A] KOG0331 ATP-dependent RNA helicase 306 8e-83
Hs4758138 [A] KOG0331 ATP-dependent RNA helicase 303 4e-82
At5g14610 [A] KOG0331 ATP-dependent RNA helicase 297 3e-80
Hs10346129 [A] KOG0336 ATP-dependent RNA helicase 297 4e-80
CE26264 [A] KOG0335 ATP-dependent RNA helicase 297 4e-80
At2g47330 [A] KOG0339 ATP-dependent RNA helicase 295 2e-79
At2g33730 [A] KOG0333 U5 snRNP-like RNA helicase subunit 294 2e-79
7298989 [A] KOG0336 ATP-dependent RNA helicase 294 3e-79
ECU08g1080 [A] KOG0331 ATP-dependent RNA helicase 288 1e-77
Hs4759278 [A] KOG0333 U5 snRNP-like RNA helicase subunit 287 3e-77
Hs17474597 [A] KOG0333 U5 snRNP-like RNA helicase subunit 287 3e-77
At5g51280 [A] KOG0341 DEAD-box protein abstrakt 287 3e-77
At1g20920 [A] KOG0334 RNA helicase 287 4e-77
Hs21071032 [A] KOG0341 DEAD-box protein abstrakt 285 1e-76
At4g33370 [A] KOG0341 DEAD-box protein abstrakt 282 9e-76
CE26887 [A] KOG0333 U5 snRNP-like RNA helicase subunit 277 4e-74
CE24878 [A] KOG0333 U5 snRNP-like RNA helicase subunit 277 4e-74
At1g31970 [A] KOG0331 ATP-dependent RNA helicase 277 4e-74
7294797 [A] KOG0339 ATP-dependent RNA helicase 276 7e-74
Hs11321632 [A] KOG0339 ATP-dependent RNA helicase 275 1e-73
7296891 [A] KOG0341 DEAD-box protein abstrakt 275 2e-73
YGL078c [A] KOG0331 ATP-dependent RNA helicase 274 3e-73
SPCC10H11.01 [A] KOG0334 RNA helicase 273 4e-73
Hs7662318 [A] KOG0334 RNA helicase 272 1e-72
7298459 [A] KOG0333 U5 snRNP-like RNA helicase subunit 272 1e-72
CE23832 [A] KOG0341 DEAD-box protein abstrakt 269 8e-72
SPCC63.11 [A] KOG0333 U5 snRNP-like RNA helicase subunit 267 3e-71
7293060 [A] KOG0334 RNA helicase 263 6e-70
CE22474 [A] KOG0336 ATP-dependent RNA helicase 263 8e-70
Hs22057246 [A] KOG0336 ATP-dependent RNA helicase 262 1e-69
CE28031 [A] KOG0334 RNA helicase 261 3e-69
CE27427 [A] KOG0334 RNA helicase 261 3e-69
CE17559 [A] KOG0339 ATP-dependent RNA helicase 259 7e-69
At3g09620 [A] KOG0334 RNA helicase 259 7e-69
SPBC17D1.06 [A] KOG0331 ATP-dependent RNA helicase 259 9e-69
Hs18595975 [A] KOG0335 ATP-dependent RNA helicase 250 5e-66
CE29052 [A] KOG0335 ATP-dependent RNA helicase 244 4e-64
YDR243c [A] KOG0333 U5 snRNP-like RNA helicase subunit 241 2e-63
ECU02g0670 [A] KOG0335 ATP-dependent RNA helicase 230 4e-60
At3g09720 [A] KOG0344 ATP-dependent RNA helicase 228 2e-59
SPAC22F3.08c [A] KOG0344 ATP-dependent RNA helicase 221 3e-57
At3g22330 [A] KOG0331 ATP-dependent RNA helicase 219 8e-57
YHR065c [A] KOG0330 ATP-dependent RNA helicase 218 2e-56
At3g22310 [A] KOG0331 ATP-dependent RNA helicase 217 4e-56
CE09901 [J] KOG0328 Predicted ATP-dependent RNA helicase FAL1 in... 213 7e-55
YGL171w [A] KOG0344 ATP-dependent RNA helicase 211 3e-54
Hs13775232 [A] KOG0331 ATP-dependent RNA helicase 211 3e-54
SPAC823.08c [A] KOG0330 ATP-dependent RNA helicase 209 8e-54
Hs15316941 [A] KOG0344 ATP-dependent RNA helicase 209 8e-54
7299019 [J] KOG0328 Predicted ATP-dependent RNA helicase FAL1 in... 209 8e-54
CE01341 [J] KOG0327 Translation initiation factor 4F helicase su... 209 1e-53
Hs19743937 [A] KOG0338 ATP-dependent RNA helicase 208 2e-53
Hs7661920 [J] KOG0328 Predicted ATP-dependent RNA helicase FAL1 ... 207 4e-53
SPAC1F5.10 [J] KOG0328 Predicted ATP-dependent RNA helicase FAL1... 206 9e-53
YBR237w [A] KOG0334 RNA helicase 205 1e-52
At3g19760 [J] KOG0328 Predicted ATP-dependent RNA helicase FAL1 ... 205 2e-52
YDR021w [J] KOG0328 Predicted ATP-dependent RNA helicase FAL1 in... 204 2e-52
Hs20149629 [A] KOG0330 ATP-dependent RNA helicase 204 2e-52
7304081 [A] KOG0338 ATP-dependent RNA helicase 204 4e-52
7293941 [A] KOG0344 ATP-dependent RNA helicase 204 4e-52
Hs4503529 [J] KOG0327 Translation initiation factor 4F helicase ... 203 6e-52
7297048 [J] KOG0327 Translation initiation factor 4F helicase su... 203 7e-52
Hs13787209 [A] KOG0331 ATP-dependent RNA helicase 201 2e-51
SPAC1006.07 [J] KOG0327 Translation initiation factor 4F helicas... 201 4e-51
Hs13129006 [A] KOG0331 ATP-dependent RNA helicase 201 4e-51
Hs4503531 [J] KOG0327 Translation initiation factor 4F helicase ... 200 5e-51
At1g77050 [A] KOG0337 ATP-dependent RNA helicase 200 5e-51
YKR059w [J] KOG0327 Translation initiation factor 4F helicase su... 199 1e-50
YJL138c [J] KOG0327 Translation initiation factor 4F helicase su... 199 1e-50
At5g08610 [A] KOG0342 ATP-dependent RNA helicase pitchoune 198 2e-50
At5g60990 [A] KOG0330 ATP-dependent RNA helicase 197 4e-50
CE27030 [A] KOG0338 ATP-dependent RNA helicase 197 5e-50
At5g62190 [A] KOG0331 ATP-dependent RNA helicase 197 5e-50
At1g72730 [J] KOG0327 Translation initiation factor 4F helicase ... 194 3e-49
At3g13920 [J] KOG0327 Translation initiation factor 4F helicase ... 194 3e-49
7298752 [A] KOG0330 ATP-dependent RNA helicase 194 3e-49
CE11402 [A] KOG0334 RNA helicase 194 4e-49
At1g16280 [A] KOG0340 ATP-dependent RNA helicase 193 8e-49
SPAC31A2.07c [A] KOG0337 ATP-dependent RNA helicase 192 1e-48
At5g63630 [A] KOG0342 ATP-dependent RNA helicase pitchoune 191 2e-48
CE06239 [A] KOG0344 ATP-dependent RNA helicase 191 3e-48
CE00337 [A] KOG0330 ATP-dependent RNA helicase 189 8e-48
YLL008w [A] KOG0338 ATP-dependent RNA helicase 189 1e-47
ECU10g0440 [A] KOG0330 ATP-dependent RNA helicase 189 1e-47
At1g51380 [J] KOG0328 Predicted ATP-dependent RNA helicase FAL1 ... 188 2e-47
At2g45810 [A] KOG0326 ATP-dependent RNA helicase 188 2e-47
SPAC30D11.03 [A] KOG0338 ATP-dependent RNA helicase 187 3e-47
At1g54270 [J] KOG0327 Translation initiation factor 4F helicase ... 186 9e-47
At3g61240 [A] KOG0326 ATP-dependent RNA helicase 186 1e-46
At5g05450 [A] KOG0345 ATP-dependent RNA helicase 185 2e-46
SPAC1F7.02c [A] KOG0342 ATP-dependent RNA helicase pitchoune 184 3e-46
SPBC543.06c [A] KOG0340 ATP-dependent RNA helicase 183 8e-46
At5g08620 [A] KOG0342 ATP-dependent RNA helicase pitchoune 183 8e-46
7291960_2 [A] KOG0337 ATP-dependent RNA helicase 182 1e-45
At5g11200 [A] KOG0329 ATP-dependent RNA helicase 180 7e-45
Hs19923595 [A] KOG0337 ATP-dependent RNA helicase 179 1e-44
Hs21040371 [A] KOG0329 ATP-dependent RNA helicase 178 2e-44
CE25231 [A] KOG0343 RNA Helicase 178 3e-44
At5g11170 [A] KOG0329 ATP-dependent RNA helicase 177 3e-44
YOR046c [A] KOG0332 ATP-dependent RNA helicase 177 4e-44
At1g71370 [A] KOG0345 ATP-dependent RNA helicase 177 4e-44
YDL031w [A] KOG0337 ATP-dependent RNA helicase 175 2e-43
Hs4758140 [A] KOG0326 ATP-dependent RNA helicase 175 2e-43
YHR169w [A] KOG0340 ATP-dependent RNA helicase 174 5e-43
CE03025 [A] KOG0329 ATP-dependent RNA helicase 174 5e-43
YJL033w [A] KOG0343 RNA Helicase 173 6e-43
YDL160c [A] KOG0326 ATP-dependent RNA helicase 172 1e-42
CE27336 [A] KOG0334 RNA helicase 172 1e-42
Hs4758112 [A] KOG0329 ATP-dependent RNA helicase 172 2e-42
YMR290c [A] KOG0342 ATP-dependent RNA helicase pitchoune 171 2e-42
ECU09g1640 [A] KOG0326 ATP-dependent RNA helicase 171 4e-42
CE29051 [A] KOG0335 ATP-dependent RNA helicase 171 4e-42
YDL084w [A] KOG0329 ATP-dependent RNA helicase 170 5e-42
SPBC4F6.07c [A] KOG0347 RNA helicase 170 5e-42
7297629 [A] KOG0326 ATP-dependent RNA helicase 170 5e-42
CE00839 [A] KOG0326 ATP-dependent RNA helicase 170 7e-42
7296990 [A] KOG0329 ATP-dependent RNA helicase 170 7e-42
At4g00660 [A] KOG0326 ATP-dependent RNA helicase 169 9e-42
SPBC776.09 [A] KOG0326 ATP-dependent RNA helicase 169 1e-41
Hs13514831 [A] KOG0343 RNA Helicase 168 3e-41
CE25531 [J] KOG0328 Predicted ATP-dependent RNA helicase FAL1 in... 167 3e-41
7303950 [A] KOG0340 ATP-dependent RNA helicase 167 3e-41
YBR142w [A] KOG0347 RNA helicase 167 6e-41
SPAC1093.05 [A] KOG0343 RNA Helicase 167 6e-41
SPAC17G6.14c [A] KOG0329 ATP-dependent RNA helicase 165 2e-40
Hs17474878 [A] KOG0333 U5 snRNP-like RNA helicase subunit 165 2e-40
7290730 [A] KOG0331 ATP-dependent RNA helicase 164 5e-40
Hs14251212 [K] KOG4284 DEAD box protein 161 2e-39
SPBC691.04 [A] KOG0342 ATP-dependent RNA helicase pitchoune 161 3e-39
SPBC12C2.06 [A] KOG0332 ATP-dependent RNA helicase 161 3e-39
7299006 [A] KOG0345 ATP-dependent RNA helicase 160 7e-39
SPBC24C6.02 [A] KOG0345 ATP-dependent RNA helicase 159 1e-38
Hs13787206 [A] KOG0342 ATP-dependent RNA helicase pitchoune 159 1e-38
CE23814 [A] KOG0340 ATP-dependent RNA helicase 159 1e-38
At4g16630 [A] KOG0338 ATP-dependent RNA helicase 159 1e-38
ECU10g0690 [A] KOG0345 ATP-dependent RNA helicase 159 2e-38
7293369 [A] KOG0343 RNA Helicase 159 2e-38
SPBC21H7.04 [A] KOG0348 ATP-dependent RNA helicase 157 4e-38
At3g16840 [A] KOG0347 RNA helicase 157 6e-38
YDR194c [A] KOG0342 ATP-dependent RNA helicase pitchoune 155 1e-37
7300808 [A] KOG0342 ATP-dependent RNA helicase pitchoune 155 2e-37
At3g18600 [A] KOG0342 ATP-dependent RNA helicase pitchoune 155 2e-37
At5g65900 [A] KOG0342 ATP-dependent RNA helicase pitchoune 154 5e-37
At5g54910 [A] KOG0343 RNA Helicase 153 9e-37
At1g12770_1 [J] KOG0327 Translation initiation factor 4F helicas... 152 1e-36
CE27553 [A] KOG0337 ATP-dependent RNA helicase 152 2e-36
ECU09g1200 [J] KOG0327 Translation initiation factor 4F helicase... 151 3e-36
YFL002c [A] KOG0345 ATP-dependent RNA helicase 150 7e-36
Hs21327697 [A] KOG0332 ATP-dependent RNA helicase 149 1e-35
HsM7019399 [A] KOG0332 ATP-dependent RNA helicase 148 2e-35
At1g63250 [A] KOG0342 ATP-dependent RNA helicase pitchoune 148 3e-35
At2g40700 [A] KOG0348 ATP-dependent RNA helicase 147 4e-35
ECU10g1680 [A] KOG0343 RNA Helicase 146 1e-34
Hs6005743 [A] KOG0332 ATP-dependent RNA helicase 144 5e-34
7296165 [A] KOG0330 ATP-dependent RNA helicase 143 7e-34
Hs8922886 [A] KOG0332 ATP-dependent RNA helicase 142 2e-33
At2g07750 [A] KOG0342 ATP-dependent RNA helicase pitchoune 141 3e-33
CE26853 [A] KOG0342 ATP-dependent RNA helicase pitchoune 141 3e-33
7294824 [K] KOG4284 DEAD box protein 141 3e-33
7302399 [A] KOG0347 RNA helicase 140 6e-33
CE27320 [A] KOG0335 ATP-dependent RNA helicase 140 8e-33
At3g53110 [A] KOG0332 ATP-dependent RNA helicase 140 8e-33
YKR024c [A] KOG0348 ATP-dependent RNA helicase 138 2e-32
ECU02g1520 [J] KOG0328 Predicted ATP-dependent RNA helicase FAL1... 138 3e-32
CE01338 [J] KOG0327 Translation initiation factor 4F helicase su... 137 5e-32
7296530 [A] KOG0349 Putative DEAD-box RNA helicase DDX1 137 5e-32
At4g34910 [A] KOG0346 RNA helicase 137 6e-32
ECU05g1270 [A] KOG0331 ATP-dependent RNA helicase 135 1e-31
CE18221 [A] KOG0332 ATP-dependent RNA helicase 135 1e-31
CE18220 [A] KOG0332 ATP-dependent RNA helicase 135 1e-31
CE18219 [A] KOG0332 ATP-dependent RNA helicase 135 1e-31
Hs4826686 [A] KOG0349 Putative DEAD-box RNA helicase DDX1 134 3e-31
Hs9966805 [A] KOG0347 RNA helicase 134 4e-31
CE11190 [A] KOG0347 RNA helicase 133 7e-31
YLR276c [A] KOG0346 RNA helicase 133 9e-31
At4g09730 [A] KOG0331 ATP-dependent RNA helicase 132 1e-30
At1g71280 [A] KOG0345 ATP-dependent RNA helicase 132 2e-30
Hs8922976 [A] KOG0330 ATP-dependent RNA helicase 127 4e-29
7295505 [A] KOG0346 RNA helicase 125 1e-28
Hs9506931 [A] KOG0346 RNA helicase 125 2e-28
Hs20336298 [A] KOG0348 ATP-dependent RNA helicase 125 2e-28
Hs17505907 [A] KOG0348 ATP-dependent RNA helicase 125 2e-28
CE28485 [K] KOG4284 DEAD box protein 124 3e-28
At3g06980 [A] KOG0331 ATP-dependent RNA helicase 124 3e-28
Hs4826688 [J] KOG0327 Translation initiation factor 4F helicase ... 122 2e-27
CE03821 [A] KOG0345 ATP-dependent RNA helicase 122 2e-27
CE06825 [A] KOG0335 ATP-dependent RNA helicase 119 1e-26
CE27728 [A] KOG0346 RNA helicase 119 2e-26
Hs22054507 [A] KOG0342 ATP-dependent RNA helicase pitchoune 117 5e-26
SPCC285.03 [A] KOG0350 DEAD-box ATP-dependent RNA helicase 116 9e-26
Hs20551983 [A] KOG0345 ATP-dependent RNA helicase 115 2e-25
At5g19210 [J] KOG0327 Translation initiation factor 4F helicase ... 113 8e-25
7293348 [A] KOG0348 ATP-dependent RNA helicase 113 8e-25
CE27641 [A] KOG0349 Putative DEAD-box RNA helicase DDX1 111 3e-24
YNR038w [A] KOG0350 DEAD-box ATP-dependent RNA helicase 110 6e-24
Hs9506609 [A] KOG0340 ATP-dependent RNA helicase 109 1e-23
Hs17475661 [J] KOG0327 Translation initiation factor 4F helicase... 105 2e-22
ECU06g1250 [A] KOG0337 ATP-dependent RNA helicase 103 1e-21
SPCC1494.06c [A] KOG0346 RNA helicase 102 2e-21
At4g15850 [A] KOG0350 DEAD-box ATP-dependent RNA helicase 100 5e-21
CE15167 [A] KOG0335 ATP-dependent RNA helicase 99 1e-20
Hs20548087 [J] KOG0327 Translation initiation factor 4F helicase... 99 2e-20
CE28975 [A] KOG0335 ATP-dependent RNA helicase 99 2e-20
CE00456 [A] KOG0350 DEAD-box ATP-dependent RNA helicase 99 2e-20
Hs21040373 [A] KOG0329 ATP-dependent RNA helicase 97 7e-20
7294064 [A] KOG0350 DEAD-box ATP-dependent RNA helicase 94 5e-19
ECU07g1060 [A] KOG0344 ATP-dependent RNA helicase 94 6e-19
YGL064c [A] KOG0335 ATP-dependent RNA helicase 89 3e-17
At1g59990 [A] KOG0333 U5 snRNP-like RNA helicase subunit 88 3e-17
Hs22044561 [A] KOG0331 ATP-dependent RNA helicase 70 7e-12
SPAC212.11 [L] KOG0351 ATP-dependent DNA helicase 69 2e-11
Hs22070384 [A] KOG0342 ATP-dependent RNA helicase pitchoune 64 9e-10
7299503 [L] KOG0351 ATP-dependent DNA helicase 60 8e-09
Hs22045464 [A] KOG0343 RNA Helicase 59 2e-08
YMR190c [L] KOG0351 ATP-dependent DNA helicase 57 6e-08
At1g27880 [L] KOG0351 ATP-dependent DNA helicase 54 5e-07
7294377 [L] KOG0352 ATP-dependent DNA helicase 54 5e-07
Hs4759030 [L] KOG0351 ATP-dependent DNA helicase 53 1e-06
ECU07g1130 [L] KOG0351 ATP-dependent DNA helicase 53 1e-06
Hs4557365 [L] KOG0351 ATP-dependent DNA helicase 53 2e-06
Hs20555745 [A] KOG0326 ATP-dependent RNA helicase 52 2e-06
At1g60930 [L] KOG0351 ATP-dependent DNA helicase 52 3e-06
Hs4759032 [L] KOG0352 ATP-dependent DNA helicase 52 4e-06
Hs17436931 [A] KOG0342 ATP-dependent RNA helicase pitchoune 50 8e-06
7300752 [R] KOG0354 DEAD-box like helicase 50 8e-06
>YOR204w [A] KOG0335 ATP-dependent RNA helicase
Length = 604
Score = 723 bits (1866), Expect = 0.0
Identities = 378/585 (64%), Positives = 432/585 (73%), Gaps = 30/585 (5%)
Query: 1 MSDIAENMSNLSVQDNDSGATSGDSRRSYVPPHVRGQQRSGSGNYRGRSDNFGGNER--- 57
M++++E + NLS+ DN+ YVPPH+RG+ RS N ++N GG
Sbjct: 1 MAELSEQVQNLSINDNNENG--------YVPPHLRGKPRSARNNSSNYNNNNGGYNGGRG 52
Query: 58 --SFFGNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDGKHVPAAK 115
SFF N IDGKHVPA +
Sbjct: 53 GGSFFSNNRRGGYGNGGFFGGNNGGSRSNGRSGGRW--------------IDGKHVPAPR 98
Query: 116 NANLELELFGVAEDKSFQSSGINFDNYDDIPVEASGNDVPEPISEFHSPPLDPLLLDNIK 175
N E+ +FGV ED +FQSSGINFDNYDDIPV+ASG DVPEPI+EF SPPLD LLL+NIK
Sbjct: 99 NEKAEIAIFGVPEDPNFQSSGINFDNYDDIPVDASGKDVPEPITEFTSPPLDGLLLENIK 158
Query: 176 LARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGN 235
LARFTKPTPVQKYSVPIVA GRDLMACAQTGSGKTGGFLFPVLSESF +GP+ PE+ G+
Sbjct: 159 LARFTKPTPVQKYSVPIVANGRDLMACAQTGSGKTGGFLFPVLSESFKTGPSPQPESQGS 218
Query: 236 SYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNL 295
Y +K YPTAVI+APTRELATQI+DEAKKFTYRSWVK VVYGG+ I NQ++++ GC+L
Sbjct: 219 FYQRKAYPTAVIMAPTRELATQIFDEAKKFTYRSWVKACVVYGGSPIGNQLREIERGCDL 278
Query: 296 LVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTL 355
LVATPGRL DLLER ISLANVKYLVLDEADRMLDMGFEPQIR IVE DM V RQTL
Sbjct: 279 LVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMGFEPQIRHIVEDCDMTPVGERQTL 338
Query: 356 MFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASN 415
MFSATFP++IQHLA DFL DY+FLSVGRVGSTSENITQK+LYVE+ DK LLDLL+AS
Sbjct: 339 MFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDLLSAST 398
Query: 416 EGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAV 475
+GLTLIFVETKR AD LTDFLIM+ F+ATAIHGDRTQ ERERAL+AF++G AT+LVATAV
Sbjct: 399 DGLTLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAATLLVATAV 458
Query: 476 AARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLL 535
AARGLDIPNVTHVIN+DLP+D+DDYVHRIGRTGRAGNTG+AT FFN N N+ K L +L
Sbjct: 459 AARGLDIPNVTHVINYDLPSDVDDYVHRIGRTGRAGNTGLATAFFNSENSNIVKGLHEIL 518
Query: 536 SEANQEVPSFLTTIMREASSXXXXXXXXXXXXXXXNSTRDFRRGG 580
+EANQEVPSFL M A N+ RD+R+ G
Sbjct: 519 TEANQEVPSFLKDAMMSAPG---SRSNSRRGGFGRNNNRDYRKAG 560
>YPL119c [A] KOG0335 ATP-dependent RNA helicase
Length = 617
Score = 708 bits (1827), Expect = 0.0
Identities = 364/593 (61%), Positives = 433/593 (72%), Gaps = 31/593 (5%)
Query: 1 MSDIAENMSNLSVQDNDSGATSGDSRRSYVPPHVRGQQRSG-------------SGNYRG 47
M+D+ + +SNLS+ + ++G G S SYVPPH+R + + G++
Sbjct: 1 MADLPQKVSNLSINNKENGGGGGKS--SYVPPHLRSRGKPSFERSTPKQEDKVTGGDFFR 58
Query: 48 RSDNFGGNERSFFGNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXID 107
R+ GN FFG ++
Sbjct: 59 RAGRQTGNNGGFFG----------------FSKERNGGTSANYNRGGSSNYKSSGNRWVN 102
Query: 108 GKHVPAAKNANLELELFGVAEDKSFQSSGINFDNYDDIPVEASGNDVPEPISEFHSPPLD 167
GKH+P KNA LE ELFGV +D + SSGI FDNYD+IPV+ASG DVPEPI +F SPPLD
Sbjct: 103 GKHIPGPKNAKLEAELFGVHDDPDYHSSGIKFDNYDNIPVDASGKDVPEPILDFSSPPLD 162
Query: 168 PLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPA 227
LL++NIKLA FTKPTPVQKYS+PIV GRDLMACAQTGSGKTGGFLFP+ +E F SGP+
Sbjct: 163 ELLMENIKLASFTKPTPVQKYSIPIVTKGRDLMACAQTGSGKTGGFLFPLFTELFRSGPS 222
Query: 228 STPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIK 287
PE A + Y +K YP+A++LAPTRELATQI++EA+KFTYRSWV+P VVYGGA I NQ++
Sbjct: 223 PVPEKAQSFYSRKGYPSALVLAPTRELATQIFEEARKFTYRSWVRPCVVYGGAPIGNQMR 282
Query: 288 QMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMP 347
++ GC+LLVATPGRL DLLER +SLAN+KYLVLDEADRMLDMGFEPQIR IVE DMP
Sbjct: 283 EVDRGCDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMGFEPQIRHIVEECDMP 342
Query: 348 SVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTL 407
SV+NRQTLMFSATFP +IQHLA DFL +Y+FLSVGRVGSTSENITQ+ILYV+D DK L
Sbjct: 343 SVENRQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSAL 402
Query: 408 LDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRA 467
LDLL+A ++GLTLIFVETKR AD LTDFLIM+ FKATAIHGDRTQ ERERALSAFK A
Sbjct: 403 LDLLSAEHKGLTLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAERERALSAFKANVA 462
Query: 468 TILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNV 527
ILVATAVAARGLDIPNVTHVIN+DLP+DIDDYVHRIGRTGRAGNTGVAT+FFN N+N+
Sbjct: 463 DILVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRIGRTGRAGNTGVATSFFNSNNQNI 522
Query: 528 AKELVSLLSEANQEVPSFLTTIMREASSXXXXXXXXXXXXXXXNSTRDFRRGG 580
K L+ +L+EANQEVP+FL+ + R+ S N +RD+R+ G
Sbjct: 523 VKGLMEILNEANQEVPTFLSDLSRQNSRGGRTRGGGGFFNSRNNGSRDYRKHG 575
>SPCC1795.11 [A] KOG0335 ATP-dependent RNA helicase
Length = 636
Score = 609 bits (1570), Expect = e-174
Identities = 311/452 (68%), Positives = 366/452 (80%), Gaps = 5/452 (1%)
Query: 107 DGKHVPAAKNANLELELFGVAEDKSFQSSGINFDNYDDIPVEASGNDVPEPISEFHSPPL 166
DG+HV A+N LE +LFG D + S+GINF+ YDDIPVE SG D+ EP++EF SPPL
Sbjct: 118 DGQHVIGARNTLLERQLFGAVADGTKVSTGINFEKYDDIPVEVSGGDI-EPVNEFTSPPL 176
Query: 167 DPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGP 226
+ LL NIKL+ +T+PTPVQK S+PIV +GRDLMACAQTGSGKT GFLFP+LS +F GP
Sbjct: 177 NSHLLQNIKLSGYTQPTPVQKNSIPIVTSGRDLMACAQTGSGKTAGFLFPILSLAFDKGP 236
Query: 227 ASTP--EAAGNSYI-KKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASID 283
A+ P + AG Y +K YPT +ILAPTREL QI++E++KF YRSWV+P VYGGA I
Sbjct: 237 AAVPVDQDAGMGYRPRKAYPTTLILAPTRELVCQIHEESRKFCYRSWVRPCAVYGGADIR 296
Query: 284 NQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRIVEG 343
QI+Q+ GC+LL ATPGRL DL++R ISLAN+K+LVLDEADRMLDMGFEPQIR IVEG
Sbjct: 297 AQIRQIDQGCDLLSATPGRLVDLIDRGRISLANIKFLVLDEADRMLDMGFEPQIRHIVEG 356
Query: 344 SDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDK 403
+DM SV+ RQTLMFSATFP +IQ LA DFLKDYVFLSVGRVGSTSENITQK+++VED +K
Sbjct: 357 ADMTSVEERQTLMFSATFPRDIQLLARDFLKDYVFLSVGRVGSTSENITQKVVHVEDSEK 416
Query: 404 NDTLLDLL-AASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAF 462
LLD+L EGLTLIFVETKR AD+LTD+L+ F AT+IHGDRTQ ERERAL F
Sbjct: 417 RSYLLDILHTLPPEGLTLIFVETKRMADTLTDYLLNSNFPATSIHGDRTQRERERALELF 476
Query: 463 KTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNR 522
++GR +I+VATAVA+RGLDIPNVTHVIN+DLP DIDDYVHRIGRTGRAGNTG A FFNR
Sbjct: 477 RSGRTSIMVATAVASRGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGQAVAFFNR 536
Query: 523 GNKNVAKELVSLLSEANQEVPSFLTTIMREAS 554
NK +AKEL+ LL EANQE PSFL + RE+S
Sbjct: 537 NNKGIAKELIELLQEANQECPSFLIAMARESS 568
>Hs13514813 [A] KOG0335 ATP-dependent RNA helicase
Length = 662
Score = 522 bits (1345), Expect = e-148
Identities = 290/567 (51%), Positives = 366/567 (64%), Gaps = 33/567 (5%)
Query: 10 NLSVQDNDSGATSGDSRRSYVPPHVRGQQ-------RSGSG-----------NYRGRSDN 51
+L+ DN SG ++ R Y+PPH+R ++ + SG ++ RSD+
Sbjct: 20 DLNSSDNQSGGSTASKGR-YIPPHLRNREATRGFYDKDSSGWSSSKDKDAYSSFGSRSDS 78
Query: 52 FGGNERSFFGNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXIDGK 109
G + SFF + D
Sbjct: 79 RG--KSSFFSDRGSGSRGRFDDRGRSDYDGIGSRGDRSGFGKFERGGNSRWCDKSDEDDW 136
Query: 110 HVPAAKNANLELELFGVAEDKSFQSSGINFDNYDDIPVEASGNDVPEPISEFHSPPLDPL 169
P + LE ELF S ++GINF+ YDDIPVEA+GN+ P I F + +
Sbjct: 137 SKPLPPSERLEQELF------SGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEI 190
Query: 170 LLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPAST 229
++ NI+L R+T+PTPVQK+++PI+ RDLMACAQTGSGKT FL P+LS+ +S GP
Sbjct: 191 IMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEA 250
Query: 230 PEAA---GNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQI 286
A G +K YP +++LAPTRELA QIY+EA+KF+YRS V+P VVYGGA I QI
Sbjct: 251 LRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQI 310
Query: 287 KQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDM 346
+ + GC+LLVATPGRL D++ER I L KYLVLDEADRMLDMGFEPQIRRIVE M
Sbjct: 311 RDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTM 370
Query: 347 PSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDT 406
P R T+MFSATFP EIQ LA DFL +Y+FL+VGRVGSTSENITQK+++VE+ DK
Sbjct: 371 PPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSF 430
Query: 407 LLDLL-AASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTG 465
LLDLL A + LTL+FVETK+ ADSL DFL EG+ T+IHGDR+Q +RE AL F++G
Sbjct: 431 LLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSG 490
Query: 466 RATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNK 525
++ ILVATAVAARGLDI NV HVINFDLP+DI++YVHRIGRTGR GN G+AT+FFN N
Sbjct: 491 KSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNI 550
Query: 526 NVAKELVSLLSEANQEVPSFLTTIMRE 552
N+ K+L+ LL EA QEVPS+L + E
Sbjct: 551 NITKDLLDLLVEAKQEVPSWLENMAYE 577
>Hs13514809 [A] KOG0335 ATP-dependent RNA helicase
Length = 660
Score = 521 bits (1342), Expect = e-147
Identities = 267/445 (60%), Positives = 334/445 (75%), Gaps = 10/445 (2%)
Query: 112 PAAKNANLELELFGVAEDKSFQSSGINFDNYDDIPVEASGNDVPEPISEFHSPPLDPLLL 171
P + LE ELF S ++GINF+ YDDIPVEA+G++ P I F + +++
Sbjct: 137 PLPPSERLEQELF------SGGNTGINFEKYDDIPVEATGSNCPPHIENFSDIDMGEIIM 190
Query: 172 DNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPE 231
NI+L R+T+PTPVQK+++PI+ RDLMACAQTGSGKT FL P+LS+ ++ GP +
Sbjct: 191 GNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALK 250
Query: 232 AA---GNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQ 288
A G +K YP +++LAPTRELA QIY+EA+KF+YRS V+P VVYGGA I QI+
Sbjct: 251 AVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRD 310
Query: 289 MRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPS 348
+ GC+LLVATPGRL D++ER I L KYLVLDEADRMLDMGFEPQIRRIVE MP
Sbjct: 311 LERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPP 370
Query: 349 VDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLL 408
R T+MFSATFP EIQ LA DFL +Y+FL+VGRVGSTSENITQK+++VED DK LL
Sbjct: 371 KGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLL 430
Query: 409 DLLAAS-NEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRA 467
D+L A+ ++ LTL+FVETK+ ADSL DFL EG+ T+IHGDR+Q +RE AL F++G++
Sbjct: 431 DILGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKS 490
Query: 468 TILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNV 527
ILVATAVAARGLDI NV HVINFDLP+DI++YVHRIGRTGR GN G+AT+FFN N N+
Sbjct: 491 PILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNI 550
Query: 528 AKELVSLLSEANQEVPSFLTTIMRE 552
K+L+ LL EA QEVPS+L + E
Sbjct: 551 TKDLLDLLVEAKQEVPSWLENMAYE 575
>7299061 [A] KOG0335 ATP-dependent RNA helicase
Length = 798
Score = 514 bits (1323), Expect = e-145
Identities = 258/440 (58%), Positives = 330/440 (74%), Gaps = 13/440 (2%)
Query: 114 AKNANLELELFGVAEDKSFQSSGINFDNYDDIPVEASGNDVPEPISEFHSPPLDPLLLDN 173
A++ LE+ELFGV ++GINFD Y+DIPVEA+G +VP I+ F L ++ +N
Sbjct: 256 ARDERLEVELFGVG------NTGINFDKYEDIPVEATGQNVPPNITSFDDVQLTEIIRNN 309
Query: 174 IKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAA 233
+ LAR+ KPTPVQK+++PI+ GRDLMACAQTGSGKT FL P+L++ + G P++
Sbjct: 310 VALARYDKPTPVQKHAIPIIINGRDLMACAQTGSGKTAAFLVPILNQMYELGHVPPPQST 369
Query: 234 GNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGC 293
+K YP ++LAPTRELATQI++EAKKF YRS ++P V+YGG + Q++++ GC
Sbjct: 370 RQYSRRKQYPLGLVLAPTRELATQIFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGC 429
Query: 294 NLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQ 353
+L+VATPGRL D++ R + L N+++LVLDEADRMLDMGFEPQIRRIVE +MP RQ
Sbjct: 430 HLIVATPGRLEDMITRGKVGLENIRFLVLDEADRMLDMGFEPQIRRIVEQLNMPPTGQRQ 489
Query: 354 TLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAA 413
TLMFSATFP +IQ LASDFL +Y+FL+VGRVGSTSENITQ IL+V + DK LLDLL++
Sbjct: 490 TLMFSATFPKQIQELASDFLSNYIFLAVGRVGSTSENITQTILWVYEPDKRSYLLDLLSS 549
Query: 414 SNEG-------LTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGR 466
+G LTLIFVETK+ ADSL +FL T+IHGDRTQ ERE AL F++G
Sbjct: 550 IRDGPEYTKDSLTLIFVETKKGADSLEEFLYQCNHPVTSIHGDRTQKEREEALRCFRSGD 609
Query: 467 ATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKN 526
ILVATAVAARGLDIP+V HVINFDLP+D+++YVHRIGRTGR GN GVAT+FFN N+N
Sbjct: 610 CPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNEKNRN 669
Query: 527 VAKELVSLLSEANQEVPSFL 546
+ +L+ LL E QE+PSF+
Sbjct: 670 ICSDLLELLIETKQEIPSFM 689
>At2g42520 [A] KOG0335 ATP-dependent RNA helicase
Length = 633
Score = 491 bits (1265), Expect = e-138
Identities = 258/452 (57%), Positives = 324/452 (71%), Gaps = 16/452 (3%)
Query: 137 INFDNYDDIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAG 196
INFD Y+DIP+E SG++VP P++ F L L NI+ ++ KPTPVQ++++PI+ G
Sbjct: 137 INFDAYEDIPIETSGDNVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEG 196
Query: 197 RDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELAT 256
RDLMACAQTGSGKT F FP++S P + + VYP AVIL+PTRELA+
Sbjct: 197 RDLMACAQTGSGKTAAFCFPIISGIMKDQHVQRPRGS-----RTVYPLAVILSPTRELAS 251
Query: 257 QIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLAN 316
QI+DEAKKF+Y++ VK +V YGG I+ Q++++ G ++LVATPGRL DLLER +S+
Sbjct: 252 QIHDEAKKFSYQTGVKVVVAYGGTPINQQLRELERGVDILVATPGRLNDLLERARVSMQM 311
Query: 317 VKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDY 376
+++L LDEADRMLDMGFEPQIR+IVE DMP RQTL+FSATFP EIQ LA+DFL +Y
Sbjct: 312 IRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTLLFSATFPREIQRLAADFLANY 371
Query: 377 VFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNE-------GLTLIFVETKRAA 429
+FL+VGRVGS+++ I Q++ +V D DK L+DLL A E LTL+FVETKR A
Sbjct: 372 IFLAVGRVGSSTDLIVQRVEFVLDSDKRSHLMDLLHAQRENGIQGKQALTLVFVETKRGA 431
Query: 430 DSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVI 489
DSL ++L + GF AT+IHGDRTQ ERE AL AFK+GR ILVAT VAARGLDIP+V HV+
Sbjct: 432 DSLENWLCINGFPATSIHGDRTQQEREVALKAFKSGRTPILVATDVAARGLDIPHVAHVV 491
Query: 490 NFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFLTTI 549
NFDLPNDIDDYVHRIGRTGRAG +G+AT FFN GN ++A+ L L+ EANQEVP +LT
Sbjct: 492 NFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNDGNTSLARPLAELMQEANQEVPEWLT-- 549
Query: 550 MREASSXXXXXXXXXXXXXXXNSTRDFRRGGA 581
R AS RDFRR G+
Sbjct: 550 -RYASRSSFGGGKNRRSGGRFGG-RDFRREGS 579
>At3g58570 [A] KOG0335 ATP-dependent RNA helicase
Length = 646
Score = 491 bits (1264), Expect = e-138
Identities = 271/551 (49%), Positives = 344/551 (62%), Gaps = 49/551 (8%)
Query: 22 SGDSRRSYVPPHVRGQQRSGS-----------GNYRGRSDNFGGNERSFFGNEXXXXXXX 70
S SR +YVPPH+R + S G Y G + +GG + + G
Sbjct: 24 SRPSRTNYVPPHLRSRTPSSEFVAPSPGNNDRGGYGGANSGYGGRGQGYGGRGSGYGGRG 83
Query: 71 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDGKHVPAAKNANLELELFGVAEDK 130
DG PA
Sbjct: 84 GPVGGWNARSGGWDRRDTETNPFGN-----------DGNADPAVNEQ------------- 119
Query: 131 SFQSSGINFDNYDDIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSV 190
+++ INF+ Y+DIP+E SG++VP P++ F L L NI+ ++ KPTPVQ+ ++
Sbjct: 120 --ENTVINFEAYEDIPIETSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAI 177
Query: 191 PIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAP 250
PI+AAGRDLMACAQTGSGKT F FP++S P ++ VYP AVIL+P
Sbjct: 178 PILAAGRDLMACAQTGSGKTAAFCFPIISGIMKDQHIERPRG-----VRGVYPLAVILSP 232
Query: 251 TRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERR 310
TRELA QI+DEA+KF+Y++ VK +V YGG ++ QI+++ G ++LVATPGRL DLLER
Sbjct: 233 TRELACQIHDEARKFSYQTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERG 292
Query: 311 YISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLAS 370
+SL V++L LDEADRMLDMGFEPQIR+IV+ DMP RQT++FSATFP EIQ LAS
Sbjct: 293 RVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRLAS 352
Query: 371 DFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNE-------GLTLIFV 423
DFL +Y+FL+VGRVGS+++ I Q++ +V D DK L+DLL A E LTL+FV
Sbjct: 353 DFLSNYIFLAVGRVGSSTDLIVQRVEFVHDSDKRSHLMDLLHAQRENGNQGKQALTLVFV 412
Query: 424 ETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIP 483
ETK+ ADSL ++L + GF AT IHGDR+Q ERE AL +FKTGR ILVAT VAARGLDIP
Sbjct: 413 ETKKGADSLENWLCINGFPATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARGLDIP 472
Query: 484 NVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVP 543
+V HV+NFDLPNDIDDYVHRIGRTGRAGN+G+AT FFN N +AK L L+ EANQEVP
Sbjct: 473 HVAHVVNFDLPNDIDDYVHRIGRTGRAGNSGLATAFFNDNNTTMAKPLAELMQEANQEVP 532
Query: 544 SFLTTIMREAS 554
+LT AS
Sbjct: 533 DWLTRYASRAS 543
>At3g58510 [A] KOG0335 ATP-dependent RNA helicase
Length = 603
Score = 484 bits (1245), Expect = e-136
Identities = 250/449 (55%), Positives = 319/449 (70%), Gaps = 14/449 (3%)
Query: 133 QSSGINFDNYDDIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPI 192
+++GINFD Y+DIPVE SG DVP P++ F L L NI+ ++ +PTPVQ++++PI
Sbjct: 125 ENTGINFDAYEDIPVETSGGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPI 184
Query: 193 VAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTR 252
+ A RDLMACAQTGSGKT F FP++S P + + VYP AVIL+PTR
Sbjct: 185 LLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGS-----RAVYPFAVILSPTR 239
Query: 253 ELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYI 312
ELA QI+DEAKKF+Y++ VK +V YGG I Q++++ GC++LVATPGRL DLLER +
Sbjct: 240 ELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLERARV 299
Query: 313 SLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDF 372
S+ +++L LDEADRMLDMGFEPQIR+IVE DMP RQT++FSATFPS+IQ LA+DF
Sbjct: 300 SMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADF 359
Query: 373 LKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSL 432
+ +Y+FL+VGRVGS+++ ITQ++ +V++ DK L+DLL A E +TKR AD+L
Sbjct: 360 MSNYIFLAVGRVGSSTDLITQRVEFVQESDKRSHLMDLLHAQRETQD----KTKRGADTL 415
Query: 433 TDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFD 492
++L M F AT+IHGDRTQ ERE AL +FKTGR ILVAT VAARGLDIP+V HV+NFD
Sbjct: 416 ENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFD 475
Query: 493 LPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFLTTIMRE 552
LPNDIDDYVHRIGRTGRAG +G+AT FFN N +A+ L L+ EANQEVP +LT
Sbjct: 476 LPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSLAELMQEANQEVPEWLTRYASR 535
Query: 553 ASSXXXXXXXXXXXXXXXNSTRDFRRGGA 581
AS RDFRR G+
Sbjct: 536 ASFGGGKKRSGGRF-----GGRDFRREGS 559
>CE28369 [A] KOG0335 ATP-dependent RNA helicase
Length = 644
Score = 451 bits (1161), Expect = e-126
Identities = 228/421 (54%), Positives = 305/421 (72%), Gaps = 4/421 (0%)
Query: 135 SGINFDNYDDIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVA 194
SGINFD Y++IPVE SG+ VP I F+ P +++N+ + ++KPTPVQK+S+P +
Sbjct: 99 SGINFDKYENIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLL 158
Query: 195 AGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTREL 254
A RDLM+CAQTGSGKT FL P++ + GP A + + YP A++L+PTREL
Sbjct: 159 ANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTREL 218
Query: 255 ATQIYDEAKKFTYRSWVKPMVVYGGA-SIDNQIKQMRYGCNLLVATPGRLTDLLERRYIS 313
A QI+ EA KF+Y+S ++ ++YGG + +Q+ ++R G ++L+ATPGRL D++E+ +I
Sbjct: 219 AIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIG 278
Query: 314 LANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFL 373
LA +YLVLDEADRMLDMGFEPQIR+IV G MP R T MFSATFP EIQ LA DFL
Sbjct: 279 LAGCRYLVLDEADRMLDMGFEPQIRKIV-GQGMPPKTARTTAMFSATFPKEIQVLAKDFL 337
Query: 374 KD-YVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASN-EGLTLIFVETKRAADS 431
KD Y+FL+VGRVGSTSENI Q++L+V + +K L+++L + E L L+FVETKR A+
Sbjct: 338 KDNYIFLAVGRVGSTSENIEQRLLWVNEMEKRSNLMEILMNEHSENLVLVFVETKRGANE 397
Query: 432 LTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINF 491
L FL + ++ +IHGD Q ERER L F++G+ ILVATAVAARGLDIPNV HVIN+
Sbjct: 398 LAYFLNRQQIRSVSIHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINY 457
Query: 492 DLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFLTTIMR 551
DLP D D+YVHRIGRTGR GN G+AT+FFN N+ + ++L +L+ E+NQEVP +L +
Sbjct: 458 DLPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNRGIGRDLKNLIVESNQEVPEWLHQVAA 517
Query: 552 E 552
E
Sbjct: 518 E 518
>CE24451 [A] KOG0335 ATP-dependent RNA helicase
Length = 641
Score = 451 bits (1161), Expect = e-126
Identities = 228/421 (54%), Positives = 305/421 (72%), Gaps = 4/421 (0%)
Query: 135 SGINFDNYDDIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVA 194
SGINFD Y++IPVE SG+ VP I F+ P +++N+ + ++KPTPVQK+S+P +
Sbjct: 96 SGINFDKYENIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLL 155
Query: 195 AGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTREL 254
A RDLM+CAQTGSGKT FL P++ + GP A + + YP A++L+PTREL
Sbjct: 156 ANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTREL 215
Query: 255 ATQIYDEAKKFTYRSWVKPMVVYGGA-SIDNQIKQMRYGCNLLVATPGRLTDLLERRYIS 313
A QI+ EA KF+Y+S ++ ++YGG + +Q+ ++R G ++L+ATPGRL D++E+ +I
Sbjct: 216 AIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIG 275
Query: 314 LANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFL 373
LA +YLVLDEADRMLDMGFEPQIR+IV G MP R T MFSATFP EIQ LA DFL
Sbjct: 276 LAGCRYLVLDEADRMLDMGFEPQIRKIV-GQGMPPKTARTTAMFSATFPKEIQVLAKDFL 334
Query: 374 KD-YVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASN-EGLTLIFVETKRAADS 431
KD Y+FL+VGRVGSTSENI Q++L+V + +K L+++L + E L L+FVETKR A+
Sbjct: 335 KDNYIFLAVGRVGSTSENIEQRLLWVNEMEKRSNLMEILMNEHSENLVLVFVETKRGANE 394
Query: 432 LTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINF 491
L FL + ++ +IHGD Q ERER L F++G+ ILVATAVAARGLDIPNV HVIN+
Sbjct: 395 LAYFLNRQQIRSVSIHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINY 454
Query: 492 DLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFLTTIMR 551
DLP D D+YVHRIGRTGR GN G+AT+FFN N+ + ++L +L+ E+NQEVP +L +
Sbjct: 455 DLPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNRGIGRDLKNLIVESNQEVPEWLHQVAA 514
Query: 552 E 552
E
Sbjct: 515 E 515
>Hs9507237 [A] KOG0335 ATP-dependent RNA helicase
Length = 724
Score = 422 bits (1084), Expect = e-117
Identities = 219/426 (51%), Positives = 294/426 (68%), Gaps = 10/426 (2%)
Query: 128 EDKSFQ--SSGINFDNYDDIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPV 185
ED F +GINFD YD I VE SG+D P I F L L +NI A +TK TPV
Sbjct: 255 EDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPV 314
Query: 186 QKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTA 245
QKYS+PI+ AGRDLMACAQTGSGKT FL P+L+ G + + + P
Sbjct: 315 QKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDG------ITASRFKELQEPEC 368
Query: 246 VILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTD 305
+I+APTREL QIY EA+KF++ + V+ +V+YGG + + I+Q+ GCN+L ATPGRL D
Sbjct: 369 IIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMD 428
Query: 306 LLERRYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEI 365
++ + I L +KYLVLDEADRMLDMGF P++++++ MPS + RQTLMFSATFP EI
Sbjct: 429 IIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEI 488
Query: 366 QHLASDFLK-DYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNEGLTLIFVE 424
Q LA++FLK +Y+F++VG+VG ++ Q +L V F K + L+++L + T++FVE
Sbjct: 489 QRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEILRNIGDERTMVFVE 548
Query: 425 TKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPN 484
TK+ AD + FL E T+IHGDR Q ERE+AL F+ G+ +LVAT+VAARGLDI N
Sbjct: 549 TKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVAARGLDIEN 608
Query: 485 VTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFN-RGNKNVAKELVSLLSEANQEVP 543
V HVINFDLP+ ID+YVHRIGRTGR GNTG A +FF+ + ++A+ LV +L++A Q+VP
Sbjct: 609 VQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKVLTDAQQDVP 668
Query: 544 SFLTTI 549
++L I
Sbjct: 669 AWLEEI 674
>7298204 [A] KOG0335 ATP-dependent RNA helicase
Length = 661
Score = 399 bits (1025), Expect = e-111
Identities = 206/438 (47%), Positives = 294/438 (67%), Gaps = 21/438 (4%)
Query: 112 PAAKNANLELELFGVAEDKSFQSSGINFDNYDDIPVEASGNDVPEPISEFHSPPLDPLLL 171
P N +E+ G+A SGI+F Y++IPV+ +G+DVP+PI F S L +++
Sbjct: 205 PEPSNDAIEIFSSGIA-------SGIHFSKYNNIPVKVTGSDVPQPIQHFTSADLRDIII 257
Query: 172 DNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPE 231
DN+ + + PTP+QK S+P++++GRDLMACAQTGSGKT FL P+LS+
Sbjct: 258 DNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLPILSKLLEDPHE---- 313
Query: 232 AAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRY 291
++ P VI++PTRELA QI++EA+KF + S++K +VYGG S +Q + +
Sbjct: 314 ------LELGRPQVVIVSPTRELAIQIFNEARKFAFESYLKIGIVYGGTSFRHQNECITR 367
Query: 292 GCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDN 351
GC++++ATPGRL D ++R +I+ + +++VLDEADRMLDMGF +RRI+ M
Sbjct: 368 GCHVVIATPGRLLDFVDRTFITFEDTRFVVLDEADRMLDMGFSEDMRRIMTHVTMRP--E 425
Query: 352 RQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLL 411
QTLMFSATFP EIQ +A +FLK+YVF+++G VG ++ Q I V + K L+++L
Sbjct: 426 HQTLMFSATFPEEIQRMAGEFLKNYVFVAIGIVGGACSDVKQTIYEVNKYAKRSKLIEIL 485
Query: 412 AASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILV 471
+ +G T++FVETKR AD L FL + F T+IHGDR Q +RE+AL FK G +L+
Sbjct: 486 SEQADG-TIVFVETKRGADFLASFLSEKEFPTTSIHGDRLQSQREQALRDFKNGSMKVLI 544
Query: 472 ATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFN-RGNKNVAKE 530
AT+VA+RGLDI N+ HVIN+D+P+ IDDYVHRIGRTGR GN G AT+FF+ ++ +A +
Sbjct: 545 ATSVASRGLDIKNIKHVINYDMPSKIDDYVHRIGRTGRVGNNGRATSFFDPEKDRAIAAD 604
Query: 531 LVSLLSEANQEVPSFLTT 548
LV +L + Q VP FL T
Sbjct: 605 LVKILEGSGQTVPDFLRT 622
>At5g63120 [A] KOG0331 ATP-dependent RNA helicase
Length = 564
Score = 336 bits (861), Expect = 7e-92
Identities = 192/414 (46%), Positives = 258/414 (61%), Gaps = 18/414 (4%)
Query: 144 DIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACA 203
DI VE G DVP+P+ F +L+ I FT+PTP+Q P+ GRDL+ A
Sbjct: 125 DISVE--GRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIA 182
Query: 204 QTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAK 263
+TGSGKT +L P L + + P +ILAPTRELA QI +E++
Sbjct: 183 ETGSGKTLAYLLPALVHVSAQPRLGQDDG----------PIVLILAPTRELAVQIQEESR 232
Query: 264 KFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLD 323
KF RS V+ +YGGA QI+ +R G +++ATPGRL D+LE ++ +L V YLVLD
Sbjct: 233 KFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLD 292
Query: 324 EADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGR 383
EADRMLDMGFEPQIR+IV +RQTL++SAT+P E++ LA FL+D +G
Sbjct: 293 EADRMLDMGFEPQIRKIVSQIR----PDRQTLLWSATWPREVETLARQFLRDPYKAIIGS 348
Query: 384 VG-STSENITQKILYVEDFDKNDTLLDLLAASNEGLT-LIFVETKRAADSLTDFLIMEGF 441
+++I Q I V +K + LL LL +G LIFVETKR D +T L M+G+
Sbjct: 349 TDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQVTRQLRMDGW 408
Query: 442 KATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYV 501
A AIHGD+TQ ER+R L+ FK+GR+ I+ AT VAARGLD+ ++ V+N+D PN ++DY+
Sbjct: 409 PALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYI 468
Query: 502 HRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFLTTIMREASS 555
HRIGRTGRAG G+A TFF N A+ELV +L EA Q VP L+ ++R + S
Sbjct: 469 HRIGRTGRAGAKGMAFTFFTHDNAKFARELVKILQEAGQVVPPTLSALVRSSGS 522
>YNL112w [A] KOG0331 ATP-dependent RNA helicase
Length = 546
Score = 333 bits (853), Expect = 6e-91
Identities = 182/398 (45%), Positives = 250/398 (62%), Gaps = 18/398 (4%)
Query: 150 SGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGK 209
SG+D+P+PI+ F +L+ +K F KPT +Q P+ +GRD++ A TGSGK
Sbjct: 104 SGHDIPKPITTFDEAGFPDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGK 163
Query: 210 TGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRS 269
T + P + ++ P P P ++LAPTRELA QI E KF + S
Sbjct: 164 TLSYCLPGIVH-INAQPLLAPGDG---------PIVLVLAPTRELAVQIQTECSKFGHSS 213
Query: 270 WVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRML 329
++ VYGG QI+ + G +++ATPGRL D+LE +L V YLVLDEADRML
Sbjct: 214 RIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIGKTNLKRVTYLVLDEADRML 273
Query: 330 DMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVG-STS 388
DMGFEPQIR+IV+ +RQTLM+SAT+P E++ LA+D+L D + + VG + S S
Sbjct: 274 DMGFEPQIRKIVDQIR----PDRQTLMWSATWPKEVKQLAADYLNDPIQVQVGSLELSAS 329
Query: 389 ENITQKILYVEDFDKNDTL---LDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATA 445
NITQ + V DF+K D L L+ + NE TLIF TKR D +T +L +G+ A A
Sbjct: 330 HNITQIVEVVSDFEKRDRLNKYLETASQDNEYKTLIFASTKRMCDDITKYLREDGWPALA 389
Query: 446 IHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIG 505
IHGD+ Q ER+ L F+ GR+ I+VAT VAARG+D+ + +VIN+D+P +I+DYVHRIG
Sbjct: 390 IHGDKDQRERDWVLQEFRNGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIG 449
Query: 506 RTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVP 543
RTGRAG TG A +FF NK + +L+S++ EANQ +P
Sbjct: 450 RTGRAGATGTAISFFTEQNKGLGAKLISIMREANQNIP 487
>SPBP8B7.16c [A] KOG0331 ATP-dependent RNA helicase
Length = 550
Score = 320 bits (820), Expect = 4e-87
Identities = 177/408 (43%), Positives = 250/408 (60%), Gaps = 18/408 (4%)
Query: 151 GNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKT 210
G +VP+P++ F +L +K F PTP+Q+ + P+ +GRD++ + TGSGKT
Sbjct: 114 GLNVPKPVTTFEEAGFPNYVLKEVKQLGFEAPTPIQQQAWPMAMSGRDMVGISATGSGKT 173
Query: 211 GGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSW 270
+ P + ++ P +P P ++LAPTRELA QI E KF S
Sbjct: 174 LSYCLPAIVH-INAQPLLSPGDG---------PIVLVLAPTRELAVQIQQECTKFGKSSR 223
Query: 271 VKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLD 330
++ VYGG QI+ + G + +ATPGRL D+L+ +L V YLVLDEADRMLD
Sbjct: 224 IRNTCVYGGVPRGPQIRDLIRGVEICIATPGRLLDMLDSNKTNLRRVTYLVLDEADRMLD 283
Query: 331 MGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVG-STSE 389
MGFEPQIR+IV+ +RQT+MFSAT+P E+Q LA D+L DY+ ++VG + + S
Sbjct: 284 MGFEPQIRKIVDQIR----PDRQTVMFSATWPKEVQRLARDYLNDYIQVTVGSLDLAASH 339
Query: 390 NITQKILYVEDFDKNDTL---LDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAI 446
NI Q + V++ DK L ++ + + LIF TKR AD +T FL +G+ A AI
Sbjct: 340 NIKQIVEVVDNADKRARLGKDIEEVLKDRDNKVLIFTGTKRVADDITRFLRQDGWPALAI 399
Query: 447 HGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGR 506
HGD+ Q ER+ L+ F+TG++ I+VAT VA+RG+D+ +THV N+D P + +DYVHRIGR
Sbjct: 400 HGDKAQDERDWVLNEFRTGKSPIMVATDVASRGIDVKGITHVFNYDFPGNTEDYVHRIGR 459
Query: 507 TGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFLTTIMREAS 554
TGRAG G A T+F N A+ELVS+LSEA Q++ L + R +S
Sbjct: 460 TGRAGAKGTAYTYFTSDNAKQARELVSILSEAKQDIDPKLEEMARYSS 507
>At3g01540 [A] KOG0331 ATP-dependent RNA helicase
Length = 619
Score = 318 bits (816), Expect = 1e-86
Identities = 182/400 (45%), Positives = 251/400 (62%), Gaps = 19/400 (4%)
Query: 147 VEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTG 206
+ SG VP P+ F + P LL + A F+ PTP+Q S PI GRD++A A+TG
Sbjct: 146 ITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTG 205
Query: 207 SGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFT 266
SGKT G+L P G +S ++ PT ++L+PTRELATQI +EA KF
Sbjct: 206 SGKTLGYLIP--------GFLHLQRIRNDS---RMGPTILVLSPTRELATQIQEEAVKFG 254
Query: 267 YRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEAD 326
S + +YGGA Q++ + G +++VATPGRL D+LE R ISL + YLVLDEAD
Sbjct: 255 RSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEAD 314
Query: 327 RMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGS 386
RMLDMGFEPQIR+IV+ ++P+ RQTLM++AT+P ++ +A+D L + +++G V
Sbjct: 315 RMLDMGFEPQIRKIVK--EIPT--KRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDE 370
Query: 387 --TSENITQKILYVEDFDKNDTLLDLLAASNEGL-TLIFVETKRAADSLTDFLIMEGFKA 443
+++ITQ I V +K L +L + G +IF TKR D LT L + F A
Sbjct: 371 LVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQ-FGA 429
Query: 444 TAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHR 503
AIHGD++Q ER+ L+ F++GR +LVAT VAARGLD+ ++ V+N+D PN ++DYVHR
Sbjct: 430 AAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHR 489
Query: 504 IGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVP 543
IGRTGRAG TG A TFF + A +L+ +L ANQ VP
Sbjct: 490 IGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVP 529
>CE18785 [A] KOG0331 ATP-dependent RNA helicase
Length = 561
Score = 315 bits (808), Expect = 1e-85
Identities = 180/404 (44%), Positives = 245/404 (60%), Gaps = 19/404 (4%)
Query: 147 VEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTG 206
V G VP P+ EF+ PL P + + +F KPT +Q S PI +GRD+++ A+TG
Sbjct: 118 VTLEGRGVPRPVFEFNEAPL-PGQIHELLYGKFQKPTVIQSISWPIAMSGRDIISIAKTG 176
Query: 207 SGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFT 266
SGKT F+ P L E P ++L PTRELA Q+ + + F
Sbjct: 177 SGKTLAFMLPALVHITKQAHRQRGEG----------PAVLVLLPTRELAQQVQEVSIDFC 226
Query: 267 YRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEAD 326
+ +K ++GGAS Q + + G +++VATPGRL D L+ ++ YLVLDEAD
Sbjct: 227 HSLGLKMTCLFGGASKGPQARDLERGVDIVVATPGRLLDFLDNGTTNMKKCSYLVLDEAD 286
Query: 327 RMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVG- 385
RMLDMGFEPQI++I+ G P +RQTLMFSAT+P E++ LASDF KD FL+VG +
Sbjct: 287 RMLDMGFEPQIKKII-GQIRP---DRQTLMFSATWPKEVRALASDFQKDAAFLNVGSLEL 342
Query: 386 STSENITQKILYVEDFDKNDTLLDLL---AASNEGLTLIFVETKRAADSLTDFLIMEGFK 442
+ + NITQ + +E+ K L++LL E T+IFVETKR AD LT + +G+
Sbjct: 343 AANHNITQVVDILEEHAKQAKLMELLNHIMNQKECKTIIFVETKRKADELTRAMRRDGWP 402
Query: 443 ATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVH 502
IHGD+ QGER+ L FK G+ I++AT VAARGLD+ ++ VIN+D PN+ +DYVH
Sbjct: 403 TLCIHGDKNQGERDWVLQEFKAGKTPIMLATDVAARGLDVDDIKFVINYDYPNNSEDYVH 462
Query: 503 RIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFL 546
RIGRTGR+ G A TFF N + AK+L+ +L EA Q VP L
Sbjct: 463 RIGRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEAKQTVPQAL 506
>CE07736 [A] KOG0335 ATP-dependent RNA helicase
Length = 720
Score = 314 bits (804), Expect = 3e-85
Identities = 173/431 (40%), Positives = 253/431 (58%), Gaps = 24/431 (5%)
Query: 134 SSGINFDNYDDIPVEASGNDVP---EPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSV 190
++G FD + D V+ P +P F + + N++ A +T+ TP+Q+Y++
Sbjct: 270 NAGDFFDKFFDASVQLVSRGQPVTIQPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTL 329
Query: 191 PIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAP 250
P+VA G+D++ACAQTGSGKT FL P++S + G YP +IL P
Sbjct: 330 PLVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGG------CYPRCIILTP 383
Query: 251 TRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERR 310
TRELA QIY+E +KF+Y+S ++ VYGG ++ Q+ GC ++V T GR+ E
Sbjct: 384 TRELADQIYNEGRKFSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIGRVKHFCEDG 443
Query: 311 YISLANVKYLVLDEADRMLD-MGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLA 369
I L +YLVLDEADRM+D MGF P+I +I+ +MP D RQT+MFSATFPS +Q A
Sbjct: 444 AIKLDKCRYLVLDEADRMIDSMGFGPEIEQIINYKNMPKNDKRQTMMFSATFPSSVQEAA 503
Query: 370 SDFLK-DYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNEGLT--------- 419
L+ DY +++ ++G+ ++ + Q+ + K D LL LL + T
Sbjct: 504 RKLLREDYTMITIDKIGAANKCVIQEFELCDRTSKVDKLLKLLGIDIDTYTTEKNSDVFV 563
Query: 420 ---LIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVA 476
++FV ++ AD+L + A IHG R Q ER AL F++G +L+ATAV
Sbjct: 564 KKTIVFVAQQKMADTLASIMSAAQVPAITIHGAREQKERSAALKLFRSGAKPVLIATAVV 623
Query: 477 ARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNK-NVAKELVSLL 535
RGLDI V HVIN+D+PN+IDDY+HRIGRTGR GN+G AT+F + + + +LV L
Sbjct: 624 ERGLDIKGVDHVINYDMPNNIDDYIHRIGRTGRVGNSGRATSFISLADDVQILPQLVRTL 683
Query: 536 SEANQEVPSFL 546
++A Q VPS++
Sbjct: 684 ADAEQVVPSWM 694
>At3g06480 [A] KOG0331 ATP-dependent RNA helicase
Length = 1088
Score = 313 bits (802), Expect = 5e-85
Identities = 182/400 (45%), Positives = 247/400 (61%), Gaps = 19/400 (4%)
Query: 147 VEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTG 206
V +G ++P P F S L P +L + A F PTP+Q + PI RD++A A+TG
Sbjct: 423 VTTTGENIPAPYITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTG 482
Query: 207 SGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFT 266
SGKT G+L P +S + PT +ILAPTRELATQI DEA +F
Sbjct: 483 SGKTLGYLIPAF--------ILLRHCRNDS---RNGPTVLILAPTRELATQIQDEALRFG 531
Query: 267 YRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEAD 326
S + +YGGA Q+K++ G +++VATPGRL D+LE + I V LVLDEAD
Sbjct: 532 RSSRISCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEAD 591
Query: 327 RMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGS 386
RMLDMGFEPQIR+IV +++P RQTLM++AT+P E++ +ASD L + V +++GRV
Sbjct: 592 RMLDMGFEPQIRKIV--NEIPP--RRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDE 647
Query: 387 TSEN--ITQKILYVEDFDKNDTLLDLLAASNEGL-TLIFVETKRAADSLTDFLIMEGFKA 443
+ N ITQ + V +K L +L + G +IF TKR D L + F A
Sbjct: 648 LAANKAITQYVEVVPQMEKERRLEQILRSQERGSKVIIFCSTKRLCDHLARS-VGRHFGA 706
Query: 444 TAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHR 503
IHGD+TQGER+ L+ F++G++ +L+AT VAARGLDI ++ VIN+D P ++DYVHR
Sbjct: 707 VVIHGDKTQGERDWVLNQFRSGKSCVLIATDVAARGLDIKDIRVVINYDFPTGVEDYVHR 766
Query: 504 IGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVP 543
IGRTGRAG TGVA TFF + A +L+ +L ANQ+VP
Sbjct: 767 IGRTGRAGATGVAFTFFTEQDWKYAPDLIKVLEGANQQVP 806
>7295314 [A] KOG0331 ATP-dependent RNA helicase
Length = 811
Score = 311 bits (797), Expect = 2e-84
Identities = 174/400 (43%), Positives = 246/400 (61%), Gaps = 18/400 (4%)
Query: 147 VEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTG 206
+ G+ VP P EF +++ I+ F KPT +Q PI +GRDL+ AQTG
Sbjct: 138 ITIKGDQVPTPSIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTG 197
Query: 207 SGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFT 266
SGKT ++ P + + + P A++LAPTRELA QI A +F
Sbjct: 198 SGKTLAYVLPAVVHINNQPRLERGDG----------PIALVLAPTRELAQQIQQVAIEFG 247
Query: 267 YRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEAD 326
+ V+ ++GGA Q + + G +++ATPGRL D LER SL YLVLDEAD
Sbjct: 248 SNTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEAD 307
Query: 327 RMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVG- 385
RMLDMGFEPQIR+I++ +RQ LM+SAT+P E++ LA +FL +Y+ +++G +
Sbjct: 308 RMLDMGFEPQIRKIMQQIR----PDRQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSL 363
Query: 386 STSENITQKILYVEDFDKNDTLLDLL---AASNEGLTLIFVETKRAADSLTDFLIMEGFK 442
S + NI Q + ++ +K L+ LL +A NE T+IFVETK+ D +T + +G++
Sbjct: 364 SANHNILQIVDVCDENEKLMKLIKLLTDISAENETKTIIFVETKKRVDEITRNISRQGWR 423
Query: 443 ATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVH 502
A AIHGD++Q ER+ LS+F+ GR +ILVAT VAARGLD+ +V VIN+D P++ +DYVH
Sbjct: 424 ACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGLDVDDVKFVINYDYPSNSEDYVH 483
Query: 503 RIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEV 542
RIGRTGR+ NTG A T F N N A +L+ +L EANQ +
Sbjct: 484 RIGRTGRSNNTGTAYTLFTHSNANKANDLIQVLREANQTI 523
>CE09012 [A] KOG0335 ATP-dependent RNA helicase
Length = 974
Score = 309 bits (792), Expect = 7e-84
Identities = 171/430 (39%), Positives = 248/430 (56%), Gaps = 24/430 (5%)
Query: 134 SSGINFDNYDDIPVEASGNDVPEPISE---FHSPPLDPLLLDNIKLARFTKPTPVQKYSV 190
S G+ F+ + D V+ + + P + F L + N+ A +TK TP+Q+Y++
Sbjct: 524 SEGLMFNKFFDAEVKITSDKKPVGVKTCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTL 583
Query: 191 PIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAP 250
P++ G D+MACAQTGSGKT FL P+++ +T G YP +IL P
Sbjct: 584 PLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGG------CYPRCIILTP 637
Query: 251 TRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERR 310
TREL QIY+E +KF Y++ ++ VYGG ++ Q+ G ++V T GR+ E
Sbjct: 638 TRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEG 697
Query: 311 YISLANVKYLVLDEADRMLD-MGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLA 369
I L ++ VLDEADRM+D MGF I IV MP +NRQTLMFSATFP +Q A
Sbjct: 698 TIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTLMFSATFPDSVQEAA 757
Query: 370 SDFLKD-YVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNEGLT--------- 419
+ LK+ Y+ L++ ++G+ ++ + Q+ + +K D LL++L + T
Sbjct: 758 RNHLKEGYIMLAIDKIGAANKCVLQEFEKCDRSEKKDKLLEILGIDIDSYTTEKNSEVYT 817
Query: 420 ---LIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVA 476
++FV + AD+L L A IHG R Q ER AL F+ G +L+ATAVA
Sbjct: 818 KKTIVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVA 877
Query: 477 ARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLS 536
RGLDI V HVIN+D+P++IDDY+HRIGRTGR GN G AT+F + + N+ ELV +LS
Sbjct: 878 ERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNAGRATSFISE-DCNLLSELVRVLS 936
Query: 537 EANQEVPSFL 546
+A+Q VP ++
Sbjct: 937 DADQLVPEWM 946
>Hs5453840_1 [A] KOG0331 ATP-dependent RNA helicase
Length = 469
Score = 309 bits (792), Expect = 7e-84
Identities = 175/401 (43%), Positives = 241/401 (59%), Gaps = 19/401 (4%)
Query: 147 VEASGNDV-PEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQT 205
+ G DV P+P+ FH ++D + FT+PTP+Q P+ +GRD++ AQT
Sbjct: 79 ITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQT 138
Query: 206 GSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKF 265
GSGKT +L P + + P ++LAPTRELA Q+ A +
Sbjct: 139 GSGKTLAYLLPAIVHINHQPYLERGDG----------PICLVLAPTRELAQQVQQVADDY 188
Query: 266 TYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEA 325
S +K +YGGA QI+ + G + +ATPGRL D LE +L YLVLDEA
Sbjct: 189 GKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEA 248
Query: 326 DRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVG 385
DRMLDMGFEPQIR+IV+ +RQTLM+SAT+P E++ LA DFL+DY ++VG +
Sbjct: 249 DRMLDMGFEPQIRKIVDQIR----PDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLE 304
Query: 386 -STSENITQKILYVEDFDKNDTLLDLLA---ASNEGLTLIFVETKRAADSLTDFLIMEGF 441
S + NI Q + + +K+ L+ L+ A E T+IFVETKR D LT + +G+
Sbjct: 305 LSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGW 364
Query: 442 KATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYV 501
A IHGD++Q ER+ L+ F++G+A IL+AT VA+RGLD+ +V VIN+D PN +DYV
Sbjct: 365 PAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYV 424
Query: 502 HRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEV 542
HRIGRT R+ N G A TFF GN A+EL+ +L EANQ +
Sbjct: 425 HRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAI 465
>CE25121 [A] KOG0335 ATP-dependent RNA helicase
Length = 763
Score = 309 bits (791), Expect = 9e-84
Identities = 172/430 (40%), Positives = 250/430 (58%), Gaps = 24/430 (5%)
Query: 134 SSGINFDNYDDIPVEASGNDVP---EPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSV 190
S G+ F+ + D V+ + ++ +P F L + N+ A ++K TP+Q+Y++
Sbjct: 313 SEGLMFNKFFDAEVKLTSSEKTVGIKPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYAL 372
Query: 191 PIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAP 250
P+V G D+MACAQTGSGKT FL P+++ +T G YP +IL P
Sbjct: 373 PLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGG------CYPRCIILTP 426
Query: 251 TRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERR 310
TRELA QIY+E +KF Y++ ++ VYGG ++ Q+ G ++V T GR+ E
Sbjct: 427 TRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEG 486
Query: 311 YISLANVKYLVLDEADRMLD-MGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLA 369
I L ++ VLDEADRM+D MGF I IV MP +NRQTLMFSATFP +Q A
Sbjct: 487 TIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTLMFSATFPDSVQEAA 546
Query: 370 SDFLKD-YVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNEGLT--------- 419
FL++ YV +++ ++G+ ++ + Q+ E +K D LL+LL + T
Sbjct: 547 RAFLRENYVMIAIDKIGAANKCVLQEFERCERSEKKDKLLELLGIDIDSYTTEKSAEVYT 606
Query: 420 ---LIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVA 476
++FV + AD+L L A IHG R Q ER AL F+ G +L+ATAVA
Sbjct: 607 KKTMVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVA 666
Query: 477 ARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLS 536
RGLDI V HVIN+D+P++IDDY+HRIGRTGR GN+G AT+F + + ++ ELV +L+
Sbjct: 667 ERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNSGRATSFISE-DCSLLSELVGVLA 725
Query: 537 EANQEVPSFL 546
+A Q VP ++
Sbjct: 726 DAQQIVPDWM 735
>7296646 [A] KOG0331 ATP-dependent RNA helicase
Length = 577
Score = 307 bits (787), Expect = 3e-83
Identities = 170/406 (41%), Positives = 243/406 (58%), Gaps = 20/406 (4%)
Query: 154 VPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGF 213
VP PI +F L ++ I+ + PT +Q PI +G + + A+TGSGKT G+
Sbjct: 134 VPNPIQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGY 193
Query: 214 LFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKP 273
+ P + + P + P A++LAPTRELA QI A +F S+V+
Sbjct: 194 ILPAIVHINNQQPLQRGDG----------PIALVLAPTRELAQQIQQVATEFGSSSYVRN 243
Query: 274 MVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGF 333
V+GGA Q++ ++ GC +++ATPGRL D L +L YLVLDEADRMLDMGF
Sbjct: 244 TCVFGGAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGF 303
Query: 334 EPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVG-STSENIT 392
EPQIR+IV +RQTLM+SAT+P E++ LA DFL +Y+ +++G + S + NI
Sbjct: 304 EPQIRKIVSQIR----PDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIR 359
Query: 393 QKILYVEDFDKNDTLLDLLA-----ASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIH 447
Q + ++F K + L LL+ + + G +IFVETKR D+L F+ G + AIH
Sbjct: 360 QVVDVCDEFSKEEKLKTLLSDIYDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIH 419
Query: 448 GDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRT 507
GD++Q ER+ L F++G++ ILVAT VAARGLD+ + +VINFD P + +DY+HRIGRT
Sbjct: 420 GDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRT 479
Query: 508 GRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFLTTIMREA 553
GR+ G + FF + N AK LV +L EANQE+ L + R +
Sbjct: 480 GRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLARNS 525
>7290853 [A] KOG0331 ATP-dependent RNA helicase
Length = 945
Score = 307 bits (787), Expect = 3e-83
Identities = 170/423 (40%), Positives = 248/423 (58%), Gaps = 25/423 (5%)
Query: 144 DIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACA 203
++ + SGN++P P+ F L +++ +K FTKPT +Q PI +GRDL+ A
Sbjct: 222 ELEITVSGNELPHPVVSFEESSLPAHVIEEMKRQGFTKPTAIQSQGWPIALSGRDLVGIA 281
Query: 204 QTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAK 263
QTGSGKT ++ P + + P E P A++LAPTRELA QI +
Sbjct: 282 QTGSGKTLAYMLPAIVHIGNQPPIIRGEG----------PIALVLAPTRELAQQIQSVVR 331
Query: 264 KFTY--RSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLV 321
+ + + ++ ++GG+S Q + + G +++ATPGRL D LE R +L YLV
Sbjct: 332 DYGHLCKPEIRHTCIFGGSSKVPQARDLDRGVEVIIATPGRLIDFLENRNTNLQRCTYLV 391
Query: 322 LDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSV 381
LDEADRMLDMGFEPQIR+I+E +RQ +M+SAT+P E+Q LA DFL DY+ +++
Sbjct: 392 LDEADRMLDMGFEPQIRKIIEQIR----PDRQVVMWSATWPKEVQALAGDFLNDYIQINI 447
Query: 382 GRVG-STSENITQKILYVEDFDKNDTLLDLL--------AASNEGLTLIFVETKRAADSL 432
G + S + NI Q + + +K L+ LL + +N ++FVETK + +
Sbjct: 448 GSMNLSANHNIRQIVEICTEIEKPQRLVCLLNEISPIKNSGNNGNKIIVFVETKIKVEDI 507
Query: 433 TDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFD 492
+ EG+ AT+IHGD+TQ ER+ L F+ G++ IL+AT VA+RGLD+ ++ +VIN+D
Sbjct: 508 LQIIRAEGYNATSIHGDKTQNERDSVLKDFRNGKSNILIATDVASRGLDVEDLQYVINYD 567
Query: 493 LPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFLTTIMRE 552
PN ++YVHRIGRTGR G A TFF N A+EL+S+L EA Q L + R
Sbjct: 568 YPNSSENYVHRIGRTGRCQQLGTAYTFFTPDNAKQARELISVLEEAGQTPSQALLDLARS 627
Query: 553 ASS 555
S
Sbjct: 628 MPS 630
>At1g55150 [A] KOG0331 ATP-dependent RNA helicase
Length = 501
Score = 306 bits (783), Expect = 8e-83
Identities = 170/410 (41%), Positives = 247/410 (59%), Gaps = 16/410 (3%)
Query: 147 VEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTG 206
+ G D+P+P+ F +L+ +K A FT+PTP+Q P+ GRDL+ A+TG
Sbjct: 87 ITVEGKDIPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETG 146
Query: 207 SGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFT 266
SGKT +L P + A A G+ P ++LAPTRELA QI EA KF
Sbjct: 147 SGKTLSYLLPAIVHV----NAQPMLAHGDG------PIVLVLAPTRELAVQIQQEASKFG 196
Query: 267 YRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEAD 326
S +K +YGG Q++ ++ G +++ATPGRL D++E +L V YLVLDEAD
Sbjct: 197 SSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEAD 256
Query: 327 RMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGS 386
RMLDMGF+PQIR+IV +RQTL +SAT+P E++ L+ FL + + +G
Sbjct: 257 RMLDMGFDPQIRKIVSHIR----PDRQTLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDL 312
Query: 387 TSENITQKIL-YVEDFDKNDTLLDLLAASNEGLT-LIFVETKRAADSLTDFLIMEGFKAT 444
+ ++I+ + + K + L+ LL +G L+F++TK+ D +T L M+G+ A
Sbjct: 313 KANRAIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQITRQLRMDGWPAL 372
Query: 445 AIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRI 504
+IHGD++Q ER+ LS F++G++ I+ AT VAARGLD+ +V +VIN+D P ++DYVHRI
Sbjct: 373 SIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRI 432
Query: 505 GRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFLTTIMREAS 554
GRTGRAG G A TFF N AKEL ++L EA Q+V L ++ R +
Sbjct: 433 GRTGRAGAKGTAYTFFTVANARFAKELTNILQEAGQKVSPELASMGRSTA 482
>Hs4758138 [A] KOG0331 ATP-dependent RNA helicase
Length = 614
Score = 303 bits (777), Expect = 4e-82
Identities = 169/413 (40%), Positives = 243/413 (57%), Gaps = 18/413 (4%)
Query: 147 VEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTG 206
+ G++ P+P+ F+ ++D I FT+PT +Q P+ +G D++ AQTG
Sbjct: 82 ITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTG 141
Query: 207 SGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFT 266
SGKT +L P + + P ++LAPTRELA Q+ A ++
Sbjct: 142 SGKTLSYLLPAIVHINHQPFLERGDG----------PICLVLAPTRELAQQVQQVAAEYC 191
Query: 267 YRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEAD 326
+K +YGGA QI+ + G + +ATPGRL D LE +L YLVLDEAD
Sbjct: 192 RACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEAD 251
Query: 327 RMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVG- 385
RMLDMGFEPQIR+IV+ +RQTLM+SAT+P E++ LA DFLKDY+ +++G +
Sbjct: 252 RMLDMGFEPQIRKIVDQIR----PDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALEL 307
Query: 386 STSENITQKILYVEDFDKNDTLLDLLA---ASNEGLTLIFVETKRAADSLTDFLIMEGFK 442
S + NI Q + D +K++ L+ L+ + E T++FVETKR D LT + +G+
Sbjct: 308 SANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWP 367
Query: 443 ATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVH 502
A IHGD++Q ER+ L+ FK G+A IL+AT VA+RGLD+ +V VIN+D PN +DY+H
Sbjct: 368 AMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIH 427
Query: 503 RIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFLTTIMREASS 555
RIGRT R+ TG A TFF N +L+S+L EANQ + L ++ + S
Sbjct: 428 RIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGS 480
>At5g14610 [A] KOG0331 ATP-dependent RNA helicase
Length = 713
Score = 297 bits (761), Expect = 3e-80
Identities = 174/396 (43%), Positives = 249/396 (61%), Gaps = 31/396 (7%)
Query: 157 PISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFP 216
P + F+S + P + A F+ P+P+Q S PI RD++A A+TGSGKT G+L P
Sbjct: 227 PAAGFNSYLVLPANGRMVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIP 286
Query: 217 VLSESFSSGPASTPEAAGNSYIKKVY------PTAVILAPTRELATQIYDEAKKFTYRSW 270
G ++++++ PT ++L+PTRELATQI EA KF S
Sbjct: 287 -----------------GFMHLQRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSK 329
Query: 271 VKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLD 330
+ +YGGA Q+K++ G +++VATPGRL D+LE + ISL V YLVLDEADRMLD
Sbjct: 330 ISCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLD 389
Query: 331 MGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGS--TS 388
MGFEPQIR+IV +++P+ RQTLM++AT+P E++ +A+D L + +++G V +
Sbjct: 390 MGFEPQIRKIV--NEVPT--KRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVAN 445
Query: 389 ENITQKILYVEDFDKNDTLLDLLAASNEGLTLI-FVETKRAADSLTDFLIMEGFKATAIH 447
++ITQ I + +K+ L +L + G +I F TKR D L L F A AIH
Sbjct: 446 KSITQTIEVLAPMEKHSRLEQILRSQEPGSKIIIFCSTKRMCDQLARNLTRT-FGAAAIH 504
Query: 448 GDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRT 507
GD++Q ER+ L+ F++GR +LVAT VAARGLD+ ++ V+N+D PN ++DYVHRIGRT
Sbjct: 505 GDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRT 564
Query: 508 GRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVP 543
GRAG TG+A TFF + A +L+ +L ANQ+VP
Sbjct: 565 GRAGATGLAYTFFGDQDAKHASDLIKILEGANQKVP 600
>Hs10346129 [A] KOG0336 ATP-dependent RNA helicase
Length = 648
Score = 297 bits (760), Expect = 4e-80
Identities = 171/430 (39%), Positives = 256/430 (58%), Gaps = 29/430 (6%)
Query: 128 EDKSFQSSGINFDNYDDIPVEASGNDVPEPISEFHSP-PLDPLLLDNIKLARFTKPTPVQ 186
E S++ N +DD+ + +P P F P +++NIK A F KPTP+Q
Sbjct: 212 EADSWRKENFNI-TWDDLK-DGEKRPIPNPTCTFDDAFQCYPEVMENIKKAGFQKPTPIQ 269
Query: 187 KYSVPIVAAGRDLMACAQTGSGKT-----GGFLFPVLSESFSSGPASTPEAAGNSYIKKV 241
+ PIV G DL+ AQTG+GKT GF+ VL S ++
Sbjct: 270 SQAWPIVLQGIDLIGVAQTGTGKTLCYLMPGFIHLVLQPSLKG--------------QRN 315
Query: 242 YPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPG 301
P ++L PTRELA Q+ E K++Y+ ++ + VYGG + D QI++++ G ++++ATPG
Sbjct: 316 RPGMLVLTPTRELALQVEGECCKYSYKG-LRSVCVYGGGNRDEQIEELKKGVDIIIATPG 374
Query: 302 RLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATF 361
RL DL +++L N+ YLVLDEAD+MLDMGFEPQI +I+ + +RQT+M SAT+
Sbjct: 375 RLNDLQMSNFVNLKNITYLVLDEADKMLDMGFEPQIMKIL----LDVRPDRQTVMTSATW 430
Query: 362 PSEIQHLASDFLKDYVFLSVGRVGSTS-ENITQKILYVEDFDKNDTLLDLLAA-SNEGLT 419
P + LA +LK+ + + VG + + ++ Q I+ + +K + L + S+
Sbjct: 431 PHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQNIIVTTEEEKWSHMQTFLQSMSSTDKV 490
Query: 420 LIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARG 479
++FV K AD L+ LI+ ++HGDR Q +RE+AL FKTG+ IL+AT +A+RG
Sbjct: 491 IVFVSRKAVADHLSSDLILGNISVESLHGDREQRDREKALENFKTGKVRILIATDLASRG 550
Query: 480 LDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEAN 539
LD+ +VTHV NFD P +I++YVHRIGRTGRAG TGV+ T R + VA EL+++L AN
Sbjct: 551 LDVHDVTHVYNFDFPRNIEEYVHRIGRTGRAGRTGVSITTLTRNDWRVASELINILERAN 610
Query: 540 QEVPSFLTTI 549
Q +P L ++
Sbjct: 611 QSIPEELVSM 620
>CE26264 [A] KOG0335 ATP-dependent RNA helicase
Length = 328
Score = 297 bits (760), Expect = 4e-80
Identities = 153/242 (63%), Positives = 190/242 (78%), Gaps = 2/242 (0%)
Query: 307 LERRYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQ 366
+++ I + +YLVLDEADRMLDMGFEPQIR+IVE + MPS + R T MFSATFP EIQ
Sbjct: 1 MDQGLIGMEGCRYLVLDEADRMLDMGFEPQIRQIVECNRMPSKEERITAMFSATFPKEIQ 60
Query: 367 HLASDFLKD-YVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNEG-LTLIFVE 424
LA DFLK+ YVFL+VGRVGSTSENI QKI++VE+ +K L+DLL A+ + LTL+FVE
Sbjct: 61 LLAQDFLKENYVFLAVGRVGSTSENIMQKIVWVEEDEKRSYLMDLLDATGDSSLTLVFVE 120
Query: 425 TKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPN 484
TKR A L +L + ++ IHGD Q ERE+ L F+TG A ILVATAVAARGLDIPN
Sbjct: 121 TKRGASDLAYYLNRQNYEVVTIHGDLKQFEREKHLDLFRTGTAPILVATAVAARGLDIPN 180
Query: 485 VTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPS 544
V HVIN+DLP+D+D+YVHRIGRTGR GN G+AT+FFN N+N+A+EL+ L+ EANQE+P
Sbjct: 181 VKHVINYDLPSDVDEYVHRIGRTGRVGNVGLATSFFNDKNRNIARELMDLIVEANQELPD 240
Query: 545 FL 546
+L
Sbjct: 241 WL 242
>At2g47330 [A] KOG0339 ATP-dependent RNA helicase
Length = 748
Score = 295 bits (754), Expect = 2e-79
Identities = 171/406 (42%), Positives = 238/406 (58%), Gaps = 17/406 (4%)
Query: 147 VEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTG 206
+ SG DV P+ F ++ IK + KPT +Q ++PIV +GRD++ A+TG
Sbjct: 216 IRVSGFDVHRPVKTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTG 275
Query: 207 SGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFT 266
SGKT F+ P++ E P VI APTRELA QI+ EAKKF+
Sbjct: 276 SGKTAAFVLPMIVHIMDQPELQRDEG----------PIGVICAPTRELAHQIFLEAKKFS 325
Query: 267 YRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEAD 326
++ VYGG S Q K+++ GC ++VATPGRL D+L+ + +++ YLVLDEAD
Sbjct: 326 KAYGLRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEAD 385
Query: 327 RMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGS 386
RM D+GFEPQ+R IV G P +RQTL+FSAT P +++ LA + L D + ++VG VG
Sbjct: 386 RMFDLGFEPQVRSIV-GQIRP---DRQTLLFSATMPWKVEKLAREILSDPIRVTVGEVGM 441
Query: 387 TSENITQKILYV-EDFDKNDTLLDLLAAS-NEGLTLIFVETKRAADSLTDFLIMEGFKAT 444
+E+ITQ + + D +K LL+ L +EG L+F K D + L + FK
Sbjct: 442 ANEDITQVVNVIPSDAEKLPWLLEKLPGMIDEGDVLVFASKKATVDEIEAQLTLNSFKVA 501
Query: 445 AIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRI 504
A+HGD+ Q R L FK+G +L+AT VAARGLDI ++ V+N+D+ D+D +VHRI
Sbjct: 502 ALHGDKDQASRMETLQKFKSGVHHVLIATDVAARGLDIKSLKTVVNYDIAKDMDMHVHRI 561
Query: 505 GRTGRAGN-TGVATTFFNRGNKNVAKELVSLLSEANQEVPSFLTTI 549
GRTGRAG+ GVA T + A ELV+ L A Q VP LT +
Sbjct: 562 GRTGRAGDRDGVAYTLVTQREARFAGELVNSLVAAGQNVPPELTDL 607
>At2g33730 [A] KOG0333 U5 snRNP-like RNA helicase subunit
Length = 733
Score = 294 bits (753), Expect = 2e-79
Identities = 160/416 (38%), Positives = 241/416 (57%), Gaps = 24/416 (5%)
Query: 143 DDIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMAC 202
+D + G+ +P P+ + L LL ++ A + KP+P+Q ++P+ RD++
Sbjct: 297 EDFNISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGI 356
Query: 203 AQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEA 262
A+TGSGKT F+ P+L+ P S Y AV++APTRELA QI +E
Sbjct: 357 AETGSGKTAAFVLPMLAYISRLPPMSEENETEGPY-------AVVMAPTRELAQQIEEET 409
Query: 263 KKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVL 322
KF + + + GG SI+ Q ++ GC +++ATPGRL D LERRY L Y+VL
Sbjct: 410 VKFAHYLGFRVTSIVGGQSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLNQCNYVVL 469
Query: 323 DEADRMLDMGFEPQIRRIVEGSDMPSVD---------------NRQTLMFSATFPSEIQH 367
DEADRM+DMGFEPQ+ +++ MPS + R T MFSAT P ++
Sbjct: 470 DEADRMIDMGFEPQVAGVLDA--MPSSNLKPENEEEELDEKKIYRTTYMFSATMPPGVER 527
Query: 368 LASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNEGLTLIFVETKR 427
LA +L++ V +++G G T++ I+Q ++ +++ +K L LL E ++FV TK+
Sbjct: 528 LARKYLRNPVVVTIGTAGKTTDLISQHVIMMKESEKFFRLQKLLDELGEKTAIVFVNTKK 587
Query: 428 AADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTH 487
DS+ L G++ T +HG ++Q +RE +L F+ R +LVAT V RG+DIP+V H
Sbjct: 588 NCDSIAKNLDKAGYRVTTLHGGKSQEQREISLEGFRAKRYNVLVATDVVGRGIDIPDVAH 647
Query: 488 VINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVP 543
VIN+D+P I+ Y HRIGRTGRAG +GVAT+F + V +L +L ++N VP
Sbjct: 648 VINYDMPKHIEMYTHRIGRTGRAGKSGVATSFLTLHDTEVFYDLKQMLVQSNSAVP 703
>7298989 [A] KOG0336 ATP-dependent RNA helicase
Length = 703
Score = 294 bits (752), Expect = 3e-79
Identities = 165/403 (40%), Positives = 250/403 (61%), Gaps = 20/403 (4%)
Query: 154 VPEPISEFHSPPLD-PLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGG 212
+P P+ F + P +L+ I F+KP+P+Q + PI+ G D++ AQTG+GKT
Sbjct: 277 IPNPVWTFEQCFAEYPDMLEEITKMGFSKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLA 336
Query: 213 FLFP-VLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWV 271
FL P ++ + S P T A ++LAPTRELA QI E KK+++R +
Sbjct: 337 FLLPGMIHTEYQSTPRGTRGGAN----------VLVLAPTRELALQIEMEVKKYSFRG-M 385
Query: 272 KPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDM 331
K + VYGG + + QI + G +++ TPGRL DL+ I ++ + YLVLDEADRMLDM
Sbjct: 386 KAVCVYGGGNRNMQISDLERGAEIIICTPGRLNDLIMANVIDVSTITYLVLDEADRMLDM 445
Query: 332 GFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENI 391
GFEPQIR+++ + +RQT+M SAT+P ++ LA ++K+ + + VG + + +
Sbjct: 446 GFEPQIRKVM----LDIRPDRQTIMTSATWPPGVRRLAQSYMKNPIQVCVGSLDLAATHS 501
Query: 392 TQKILYV--EDFDKNDTLLDLLA-ASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHG 448
++I+ + +D DK +T+ + S+ +IF K AD L+ L ++GF IHG
Sbjct: 502 VKQIIKLMEDDMDKFNTITSFVKNMSSTDKIIIFCGRKVRADDLSSELTLDGFMTQCIHG 561
Query: 449 DRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTG 508
+R Q +RE+A++ K+G ILVAT VA+RGLDI ++THVIN+D P++I++YVHR+GRTG
Sbjct: 562 NRDQMDREQAIADIKSGVVRILVATDVASRGLDIEDITHVINYDFPHNIEEYVHRVGRTG 621
Query: 509 RAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFLTTIMR 551
RAG G + +FF R + +AKEL+ +L EA QEVP L + R
Sbjct: 622 RAGRQGTSISFFTREDWAMAKELIEILQEAEQEVPDELHNMAR 664
>ECU08g1080 [A] KOG0331 ATP-dependent RNA helicase
Length = 495
Score = 288 bits (738), Expect = 1e-77
Identities = 165/404 (40%), Positives = 237/404 (57%), Gaps = 18/404 (4%)
Query: 151 GNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKT 210
G +VP PI +F ++ ++ F++PT +Q P+ +GRD++ AQTGSGKT
Sbjct: 79 GTNVPHPIQKFEEAGFSSEVVSSLVEKGFSEPTAIQGQGWPMALSGRDMVGIAQTGSGKT 138
Query: 211 GGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSW 270
F+ P L + P + P ++LAPTREL QI +F
Sbjct: 139 LSFILPALVHAKDQQPLRRGDG----------PIVLVLAPTRELVMQIKKVVDEFCGMFN 188
Query: 271 VKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLD 330
++ VYGGAS QI+ + G +++ATPGRL DL ++ + L+ V +LVLDEADRMLD
Sbjct: 189 LRSTAVYGGASSQPQIRALHEGAEVVIATPGRLIDLHDQGHAPLSRVTFLVLDEADRMLD 248
Query: 331 MGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVG-STSE 389
MGFEPQ+R+I+ ++ NRQTLM+SAT+P E++ LA ++ +Y+ + VG T+
Sbjct: 249 MGFEPQLRKIIPKTNA----NRQTLMWSATWPREVRGLAESYMNEYIQVVVGNEELKTNS 304
Query: 390 NITQKILYVEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGD 449
I Q + +K D L+ +L ++F KR D L L G+ A A+HGD
Sbjct: 305 KIKQIVEVCSGREKEDKLIGVLDNFKGDKVIVFCNMKRTCDDLEYVLNRSGYGAAALHGD 364
Query: 450 RTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGR 509
++Q R++ L F++GR IL+AT VA RGLD+ +V VINFD P +DYVHRIGRT R
Sbjct: 365 KSQNIRDKVLDDFRSGRRPILIATEVAGRGLDVNDVKLVINFDFPGSCEDYVHRIGRTAR 424
Query: 510 AGNT--GVATTFFNRGNKNVAKELVSLLSEANQEVPSFLTTIMR 551
GNT G++ TFF G+K A+EL+ +L EANQ VPS L ++R
Sbjct: 425 -GNTKEGISHTFFTVGDKANARELIRMLREANQTVPSDLEDMVR 467
>Hs4759278 [A] KOG0333 U5 snRNP-like RNA helicase subunit
Length = 820
Score = 287 bits (735), Expect = 3e-77
Identities = 160/418 (38%), Positives = 235/418 (55%), Gaps = 28/418 (6%)
Query: 143 DDIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMAC 202
+D + G +P PI + L P +L+ I + +PTP+Q+ ++PI RD++
Sbjct: 375 EDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGV 434
Query: 203 AQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEA 262
A+TGSGKT FL P+L + E + P A+ILAPTRELA QI +E
Sbjct: 435 AETGSGKTAAFLIPLLVWITTLPKIDRIEESDQG------PYAIILAPTRELAQQIEEET 488
Query: 263 KKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVL 322
KF ++ + V GG S ++Q ++R GC +++ATPGRL D+LE RY+ L+ Y+VL
Sbjct: 489 IKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVL 548
Query: 323 DEADRMLDMGFEPQIRRIVE----GSDMPSVDN------------------RQTLMFSAT 360
DEADRM+DMGFEP +++I+E + P D RQT+MF+AT
Sbjct: 549 DEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTAT 608
Query: 361 FPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNEGLTL 420
P ++ LA +L+ + +G G E + QK+ + + +K LL +L + +
Sbjct: 609 MPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPII 668
Query: 421 IFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGL 480
IFV K+ D L L G+ A +HG + Q +RE ALS K G ILVAT VA RG+
Sbjct: 669 IFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGI 728
Query: 481 DIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEA 538
DI +V+ V+N+D+ +I+DY+HRIGRTGRAG +GVA TF + + V EL + E+
Sbjct: 729 DIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILES 786
>Hs17474597 [A] KOG0333 U5 snRNP-like RNA helicase subunit
Length = 820
Score = 287 bits (735), Expect = 3e-77
Identities = 160/418 (38%), Positives = 235/418 (55%), Gaps = 28/418 (6%)
Query: 143 DDIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMAC 202
+D + G +P PI + L P +L+ I + +PTP+Q+ ++PI RD++
Sbjct: 375 EDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGV 434
Query: 203 AQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEA 262
A+TGSGKT FL P+L + E + P A+ILAPTRELA QI +E
Sbjct: 435 AETGSGKTAAFLIPLLVWITTLPKIDRIEESDQG------PYAIILAPTRELAQQIEEET 488
Query: 263 KKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVL 322
KF ++ + V GG S ++Q ++R GC +++ATPGRL D+LE RY+ L+ Y+VL
Sbjct: 489 IKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVL 548
Query: 323 DEADRMLDMGFEPQIRRIVE----GSDMPSVDN------------------RQTLMFSAT 360
DEADRM+DMGFEP +++I+E + P D RQT+MF+AT
Sbjct: 549 DEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTAT 608
Query: 361 FPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNEGLTL 420
P ++ LA +L+ + +G G E + QK+ + + +K LL +L + +
Sbjct: 609 MPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPII 668
Query: 421 IFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGL 480
IFV K+ D L L G+ A +HG + Q +RE ALS K G ILVAT VA RG+
Sbjct: 669 IFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGI 728
Query: 481 DIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEA 538
DI +V+ V+N+D+ +I+DY+HRIGRTGRAG +GVA TF + + V EL + E+
Sbjct: 729 DIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILES 786
>At5g51280 [A] KOG0341 DEAD-box protein abstrakt
Length = 591
Score = 287 bits (735), Expect = 3e-77
Identities = 162/416 (38%), Positives = 253/416 (59%), Gaps = 22/416 (5%)
Query: 150 SGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGK 209
+G+D+P PI F +LD +K +PTP+Q +P++ AGRD++ A TGSGK
Sbjct: 137 NGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGK 196
Query: 210 TGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRS 269
T F+ P++ + P AAG P +I+ P+RELA Q Y+ ++F
Sbjct: 197 TLVFVLPMIMIALQE-EMMMPIAAGEG------PIGLIVCPSRELARQTYEVVEQFVAPL 249
Query: 270 W------VKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLD 323
++ ++ GG + +Q++ ++ G +++VATPGRL D+L ++ +SL +YL LD
Sbjct: 250 VEAGYPPLRSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLTLD 309
Query: 324 EADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGR 383
EADR++D+GFE IR + + RQTL+FSAT P++IQ A L V ++VGR
Sbjct: 310 EADRLVDLGFEDDIREVFDHFK----SQRQTLLFSATMPTKIQIFARSALVKPVTVNVGR 365
Query: 384 VGSTSENITQKILYVEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKA 443
G+ + ++ Q++ YV+ K LL+ L ++ + LIF E K D + ++L+++G +A
Sbjct: 366 AGAANLDVIQEVEYVKQEAKIVYLLECLQKTSPPV-LIFCENKADVDDIHEYLLLKGVEA 424
Query: 444 TAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHR 503
AIHG + Q +RE A+S+FK G+ +LVAT VA++GLD P++ HVIN+D+P +I++YVHR
Sbjct: 425 VAIHGGKDQEDREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHR 484
Query: 504 IGRTGRAGNTGVATTFFNRG-NKNVAKELVSLLSEANQEVPSFLTTI---MREASS 555
IGRTGR G TG+ATTF N+ ++ +L LL EA Q +P L + M EA +
Sbjct: 485 IGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEEAET 540
>At1g20920 [A] KOG0334 RNA helicase
Length = 1166
Score = 287 bits (734), Expect = 4e-77
Identities = 156/410 (38%), Positives = 238/410 (58%), Gaps = 18/410 (4%)
Query: 144 DIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACA 203
++ ++ G DVP PI +H L +LD +K + KP P+Q ++PI+ +GRD + A
Sbjct: 514 ELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVA 573
Query: 204 QTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAK 263
+TGSGKT GF+ P+L P + P +++APTREL QI+ + +
Sbjct: 574 KTGSGKTLGFVLPMLRHIKDQPPVEAGDG----------PIGLVMAPTRELVQQIHSDIR 623
Query: 264 KFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLL---ERRYISLANVKYL 320
KF+ ++ + VYGG+ + QI +++ G ++V TPGR+ D+L + +L V +L
Sbjct: 624 KFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFL 683
Query: 321 VLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLS 380
V+DEADRM DMGFEPQI RI++ RQT++FSATFP +++ LA L V +
Sbjct: 684 VMDEADRMFDMGFEPQITRIIQNIR----PERQTVLFSATFPRQVETLARKVLNKPVEIQ 739
Query: 381 VGRVGSTSENITQKILYVEDFDKNDTLLDLLAA-SNEGLTLIFVETKRAADSLTDFLIME 439
VG +++ITQ + + D+ LL+LL S +G L+FV+++ D+L +I
Sbjct: 740 VGGRSVVNKDITQLVEVRPESDRFLRLLELLGEWSEKGKILVFVQSQEKCDALYRDMIKS 799
Query: 440 GFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDD 499
+ ++HG + Q +RE +S FK +L+AT+VAARGLD+ + V+NFD PN +D
Sbjct: 800 SYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYED 859
Query: 500 YVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFLTTI 549
YVHR+GRTGRAG G A TF + + A +LV L + Q VP L +
Sbjct: 860 YVHRVGRTGRAGRKGCAVTFISEDDAKYAPDLVKALELSEQPVPDDLKAL 909
>Hs21071032 [A] KOG0341 DEAD-box protein abstrakt
Length = 622
Score = 285 bits (729), Expect = 1e-76
Identities = 161/406 (39%), Positives = 245/406 (59%), Gaps = 19/406 (4%)
Query: 151 GNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKT 210
G+ +P PI F +L +K PTP+Q +P + +GRD++ A TGSGKT
Sbjct: 173 GDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKT 232
Query: 211 GGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTY--- 267
F PV+ + + K+ P +I+ P+RELA Q + + +
Sbjct: 233 LVFTLPVIMFCLE-------QEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQ 285
Query: 268 ---RSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDE 324
++ + GG S+ Q++ +R+G +++VATPGRL DLL+++ +SL +YL LDE
Sbjct: 286 EDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDE 345
Query: 325 ADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRV 384
ADRM+DMGFE IR I RQTL+FSAT P +IQ+ A L V ++VGR
Sbjct: 346 ADRMIDMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRA 401
Query: 385 GSTSENITQKILYVEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKAT 444
G+ S ++ Q++ YV++ K LL+ L + + LIF E K D++ ++L+++G +A
Sbjct: 402 GAASLDVIQEVEYVKEEAKMVYLLECLQKTPPPV-LIFAEKKADVDAIHEYLLLKGVEAV 460
Query: 445 AIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRI 504
AIHG + Q ER +A+ AF+ G+ +LVAT VA++GLD P + HVIN+D+P +I++YVHRI
Sbjct: 461 AIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRI 520
Query: 505 GRTGRAGNTGVATTFFNRG-NKNVAKELVSLLSEANQEVPSFLTTI 549
GRTGR+GNTG+ATTF N+ +++V +L +LL EA Q+VP L +
Sbjct: 521 GRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVLQVL 566
>At4g33370 [A] KOG0341 DEAD-box protein abstrakt
Length = 542
Score = 282 bits (722), Expect = 9e-76
Identities = 158/410 (38%), Positives = 244/410 (58%), Gaps = 19/410 (4%)
Query: 147 VEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTG 206
+ +G D+P PI F LL +K PTP+Q +P+V +GRD++ A TG
Sbjct: 85 ITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTG 144
Query: 207 SGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFT 266
SGKT F+ P++ + P AAG P A+++ P+RELA Q YD ++F
Sbjct: 145 SGKTLVFVLPMIILALQE-EIMMPIAAGEG------PIALVICPSRELAKQTYDVVEQFV 197
Query: 267 YR------SWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYL 320
++ ++ GG + +Q+ ++ G +++VATPGRL D+L ++ +SL + L
Sbjct: 198 ASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLL 257
Query: 321 VLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLS 380
LDEADR++D+GFE IR + + RQTL+FSAT P++IQ A+ L V ++
Sbjct: 258 TLDEADRLVDLGFEDDIRHVFDHFK----SQRQTLLFSATMPAKIQIFATSALVKPVTVN 313
Query: 381 VGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEG 440
VGR G+ + ++ Q++ YV+ K LL+ L + + LIF E K D + ++L+++G
Sbjct: 314 VGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTTPPV-LIFCENKADVDDIHEYLLLKG 372
Query: 441 FKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDY 500
+A AIHG + Q +R+ A+S FK G+ +LVAT VA++GLD P++ HVIN+D+P +I++Y
Sbjct: 373 VEAVAIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENY 432
Query: 501 VHRIGRTGRAGNTGVATTFFNRGNKNVA-KELVSLLSEANQEVPSFLTTI 549
VHRIGRTGR G TG+ATTF N+ + +L LL EA Q +P L +
Sbjct: 433 VHRIGRTGRCGKTGIATTFINKNQSEITLLDLKHLLQEAKQRIPPVLAEL 482
>CE26887 [A] KOG0333 U5 snRNP-like RNA helicase subunit
Length = 730
Score = 277 bits (708), Expect = 4e-74
Identities = 159/417 (38%), Positives = 235/417 (56%), Gaps = 27/417 (6%)
Query: 143 DDIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMAC 202
+D + G VP P+ + + +K + +PTP+Q+ ++PI RD++
Sbjct: 285 EDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGV 344
Query: 203 AQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEA 262
A+TGSGKT FL P+L S P+ + + + P A+I+APTRELA QI +E
Sbjct: 345 AETGSGKTAAFLLPLLVWI-----TSLPKMERQEH-RDLGPYAIIMAPTRELAQQIEEET 398
Query: 263 KKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVL 322
KF +K + V GGAS ++Q ++R G +++ATPGRL D+LE RY+ L Y++L
Sbjct: 399 NKFGKLLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVLENRYLLLNQCTYVIL 458
Query: 323 DEADRMLDMGFEPQIRRIVE-------GSDMPSVDN--------------RQTLMFSATF 361
DEADRMLDMGFEP +++++E D DN RQT+MF+AT
Sbjct: 459 DEADRMLDMGFEPDVQKVLEYMPDTNMKKDTDEFDNEEALMKGFSTREKYRQTVMFTATM 518
Query: 362 PSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNEGLTLI 421
S I+ LA +L+ + +G G +E + Q + V + K L+++L + + +I
Sbjct: 519 SSAIERLARQYLRRPAVVHIGSAGKPTERVEQVVYMVPEDRKRKKLVEVLESQFQPPIII 578
Query: 422 FVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLD 481
FV K+ AD L+ L GFK T +HG + Q +RE AL A K G + ILVAT VA RG+D
Sbjct: 579 FVNQKKGADMLSKGLTKLGFKPTVLHGGKGQDQREYALQALKEGTSDILVATDVAGRGID 638
Query: 482 IPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEA 538
+ +V+ V+N+D+ I+DY HRIGRTGRAG G A TF + V +L +L E+
Sbjct: 639 VKDVSLVLNYDMAKSIEDYTHRIGRTGRAGKHGKAITFLTPDDTAVYFDLKQVLVES 695
>CE24878 [A] KOG0333 U5 snRNP-like RNA helicase subunit
Length = 769
Score = 277 bits (708), Expect = 4e-74
Identities = 159/417 (38%), Positives = 235/417 (56%), Gaps = 27/417 (6%)
Query: 143 DDIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMAC 202
+D + G VP P+ + + +K + +PTP+Q+ ++PI RD++
Sbjct: 285 EDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGV 344
Query: 203 AQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEA 262
A+TGSGKT FL P+L S P+ + + + P A+I+APTRELA QI +E
Sbjct: 345 AETGSGKTAAFLLPLLVWI-----TSLPKMERQEH-RDLGPYAIIMAPTRELAQQIEEET 398
Query: 263 KKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVL 322
KF +K + V GGAS ++Q ++R G +++ATPGRL D+LE RY+ L Y++L
Sbjct: 399 NKFGKLLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVLENRYLLLNQCTYVIL 458
Query: 323 DEADRMLDMGFEPQIRRIVE-------GSDMPSVDN--------------RQTLMFSATF 361
DEADRMLDMGFEP +++++E D DN RQT+MF+AT
Sbjct: 459 DEADRMLDMGFEPDVQKVLEYMPDTNMKKDTDEFDNEEALMKGFSTREKYRQTVMFTATM 518
Query: 362 PSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNEGLTLI 421
S I+ LA +L+ + +G G +E + Q + V + K L+++L + + +I
Sbjct: 519 SSAIERLARQYLRRPAVVHIGSAGKPTERVEQVVYMVPEDRKRKKLVEVLESQFQPPIII 578
Query: 422 FVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLD 481
FV K+ AD L+ L GFK T +HG + Q +RE AL A K G + ILVAT VA RG+D
Sbjct: 579 FVNQKKGADMLSKGLTKLGFKPTVLHGGKGQDQREYALQALKEGTSDILVATDVAGRGID 638
Query: 482 IPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEA 538
+ +V+ V+N+D+ I+DY HRIGRTGRAG G A TF + V +L +L E+
Sbjct: 639 VKDVSLVLNYDMAKSIEDYTHRIGRTGRAGKHGKAITFLTPDDTAVYFDLKQVLVES 695
>At1g31970 [A] KOG0331 ATP-dependent RNA helicase
Length = 537
Score = 277 bits (708), Expect = 4e-74
Identities = 174/427 (40%), Positives = 245/427 (56%), Gaps = 21/427 (4%)
Query: 129 DKSFQSSGINFDNYDDIPVEASGNDVPEP----ISEFHSPPLDPLLLDNIKLARFTKPTP 184
+K ++ + + V +G V E + F L +LD K F KP+P
Sbjct: 82 EKKLEAEDLGEGESEQQKVVVTGKGVEEAKYAALKTFAESNLPENVLDCCKT--FEKPSP 139
Query: 185 VQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPT 244
+Q ++ P + GRDL+ A+TGSGKT F P + + G S KKV PT
Sbjct: 140 IQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVLKKNK----KIGGGS--KKVNPT 193
Query: 245 AVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLT 304
++L+PTRELA QI D ++ +K + VYGG+S QI +R G ++++ TPGRL
Sbjct: 194 CLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVDIVIGTPGRLR 253
Query: 305 DLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSE 364
DL+E + L++V ++VLDEADRMLDMGFE +R I+ ++ RQ +MFSAT+P +
Sbjct: 254 DLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSNTNKV----RQMVMFSATWPLD 309
Query: 365 IQHLASDFLK-DYVFLSVGRVGSTSENITQKILYVEDFDKND----TLLDLLAASNEGLT 419
+ LA +F+ + + + +G V + + +I+ V D D LL+ S +
Sbjct: 310 VHKLAQEFMDPNPIKVIIGSVDLAANHDVMQIIEVLDERARDQRLIALLEKYHKSQKNRV 369
Query: 420 LIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARG 479
L+F K A+ L FL G+KA +IHG++ Q ER R+LS FK G +LVAT VAARG
Sbjct: 370 LVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLFKEGSCPLLVATDVAARG 429
Query: 480 LDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEAN 539
LDIP+V VIN+ P +DYVHRIGRTGRAG GVA TFF NK +A ELV++L EA
Sbjct: 430 LDIPDVEVVINYTFPLTTEDYVHRIGRTGRAGKKGVAHTFFTPLNKGLAGELVNVLREAG 489
Query: 540 QEVPSFL 546
Q VP+ L
Sbjct: 490 QVVPADL 496
>7294797 [A] KOG0339 ATP-dependent RNA helicase
Length = 791
Score = 276 bits (706), Expect = 7e-74
Identities = 169/455 (37%), Positives = 252/455 (55%), Gaps = 29/455 (6%)
Query: 111 VPAAKNANLELELFGVAEDKSFQSSGINFDNYDD---------IPVEASGNDVPEPISEF 161
+P ++ +E E F +K+F + + DD + V+ +G P+P++ F
Sbjct: 216 LPPIYHSEIEYEPF----EKNFYTQHDDIAALDDEQVRELRRTLGVKVTGPSPPKPVTSF 271
Query: 162 HSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSES 221
D L+ ++ A +T+PTP+Q +VP +GRD++ A+TGSGKT F++P+L
Sbjct: 272 GHFGFDEQLIKAVRKAEYTQPTPIQAQAVPTALSGRDIIGIAKTGSGKTAAFIWPMLMHV 331
Query: 222 FSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGAS 281
+ P +ILAPTREL+ QIY+EAKKF + + YGG S
Sbjct: 332 MDQKQLKPGDG----------PIGLILAPTRELSLQIYNEAKKFGKVYNLNVVCCYGGGS 381
Query: 282 IDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRIV 341
Q K + G ++VATPGR+ D+++ + +L V +LVLDEADRM MGFEPQ+R I
Sbjct: 382 KWEQSKALEQGAEIIVATPGRMIDMVKMKATNLRRVTFLVLDEADRMFHMGFEPQVRSIC 441
Query: 342 EGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKI-LYVED 400
+RQ LMFSATF I+ LA D L D V + G + +++ITQ + ++
Sbjct: 442 NHVR----PDRQCLMFSATFKKRIERLARDVLSDPVRIVQGDLNEANQDITQSVYVFPNP 497
Query: 401 FDK-NDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERAL 459
K N L L+ +EG LIFV K A+++++ L+++ + +HGD Q +R + +
Sbjct: 498 LQKWNWLLCHLVKFLSEGSVLIFVTKKVDAETVSNNLLIKEYNCLLLHGDMDQADRNKVI 557
Query: 460 SAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTF 519
+ FK ILVAT VAARGLDIP++ +V+N+D DI+ + HRIGRTGRAG G A T
Sbjct: 558 TQFKRKECDILVATDVAARGLDIPHIRNVVNYDTARDIETHTHRIGRTGRAGEKGNAYTL 617
Query: 520 FNRGNKNVAKELVSLLSEANQEVPSFLTTIMREAS 554
+K A LV L A+Q VP L + ++S
Sbjct: 618 VTDKDKEFAGHLVRNLEGADQLVPDDLMELAMKSS 652
>Hs11321632 [A] KOG0339 ATP-dependent RNA helicase
Length = 709
Score = 275 bits (704), Expect = 1e-73
Identities = 163/398 (40%), Positives = 225/398 (55%), Gaps = 16/398 (4%)
Query: 147 VEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTG 206
+ SG P P S F D L+ I+ + +T+PTP+Q VP+ +GRD++ A+TG
Sbjct: 122 LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG 181
Query: 207 SGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFT 266
SGKT F++P+L + P AVI+ PTREL QI+ E K+F
Sbjct: 182 SGKTAAFIWPMLIHIMDQKELEPGDG----------PIAVIVCPTRELCQQIHAECKRFG 231
Query: 267 YRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEAD 326
++ + VYGG S+ Q K ++ G ++V TPGRL D ++++ +L V YLV DEAD
Sbjct: 232 KAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEAD 291
Query: 327 RMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGS 386
RM DMGFE Q+R I +RQTL+FSATF +I+ LA D L D + + G +G
Sbjct: 292 RMFDMGFEYQVRSIASHVR----PDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGE 347
Query: 387 TSENITQ--KILYVEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKAT 444
+E++TQ +IL+ N L+ ++ G L+FV K A+ L + L EG
Sbjct: 348 ANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLG 407
Query: 445 AIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRI 504
+HGD Q ER + +S FK +LVAT VAARGLDIP++ VIN+D+ DID + HRI
Sbjct: 408 LLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRI 467
Query: 505 GRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEV 542
GRTGRAG GVA T + N A +LV L ANQ V
Sbjct: 468 GRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHV 505
>7296891 [A] KOG0341 DEAD-box protein abstrakt
Length = 619
Score = 275 bits (703), Expect = 2e-73
Identities = 160/416 (38%), Positives = 241/416 (57%), Gaps = 19/416 (4%)
Query: 144 DIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACA 203
++ + G PI F +L+ + PTP+Q +P V AGRDL+ A
Sbjct: 162 ELRILVEGETPSPPIRSFREMKFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIA 221
Query: 204 QTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAK 263
TGSGKT F+ PV+ + S P + + P +I+ P+RELA Q ++ +
Sbjct: 222 FTGSGKTLVFVLPVIMFALEQ-EYSLP------FERNEGPYGLIICPSRELAKQTHEIIQ 274
Query: 264 KFTYRSW------VKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANV 317
++ ++ + GG + + + G +++VATPGRL D+L+++ ++L
Sbjct: 275 HYSKHLQACGMPEIRSCLAMGGLPVSEALDVISRGVHIVVATPGRLMDMLDKKILTLDMC 334
Query: 318 KYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYV 377
+YL +DEADRM+DMGFE +R I RQTL+FSAT P +IQ+ A L V
Sbjct: 335 RYLCMDEADRMIDMGFEEDVRTIFSFFK----GQRQTLLFSATMPKKIQNFARSALVKPV 390
Query: 378 FLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLI 437
++VGR G+ S N+TQ++ YV+ K LLD L + + LIF E K+ D + ++L+
Sbjct: 391 TINVGRAGAASMNVTQQVEYVKQEAKVVYLLDCLQKTAPPV-LIFAEKKQDVDCIHEYLL 449
Query: 438 MEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDI 497
++G +A AIHG + Q ER RA+ A++ G+ +LVAT VA++GLD PNV HVIN+D+P+DI
Sbjct: 450 LKGVEAVAIHGGKDQEERSRAVDAYRVGKKDVLVATDVASKGLDFPNVQHVINYDMPDDI 509
Query: 498 DDYVHRIGRTGRAGNTGVATTFFNR-GNKNVAKELVSLLSEANQEVPSFLTTIMRE 552
++YVHRIGRTGR+ G+ATT N+ ++V +L LL E QEVP FL + E
Sbjct: 510 ENYVHRIGRTGRSNTKGLATTLINKTTEQSVLLDLKHLLIEGKQEVPDFLDELAPE 565
>YGL078c [A] KOG0331 ATP-dependent RNA helicase
Length = 523
Score = 274 bits (701), Expect = 3e-73
Identities = 169/411 (41%), Positives = 240/411 (58%), Gaps = 26/411 (6%)
Query: 143 DDIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMAC 202
++I VE S + P+ F LD + ++++F KPTP+Q + P + +G+D++
Sbjct: 98 NEIAVEDSLDLALRPLLSFDYLSLDSSI--QAEISKFPKPTPIQAVAWPYLLSGKDVVGV 155
Query: 203 AQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEA 262
A+TGSGKT F P +S + KK ++++PTRELA+QIYD
Sbjct: 156 AETGSGKTFAFGVPAISHLMNDQ-------------KKRGIQVLVISPTRELASQIYDNL 202
Query: 263 KKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVL 322
T + ++ VYGG D Q Q++ ++VATPGRL DLL+ + L+ V YLVL
Sbjct: 203 IVLTDKVGMQCCCVYGGVPKDEQRIQLKKS-QVVVATPGRLLDLLQEGSVDLSQVNYLVL 261
Query: 323 DEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVG 382
DEADRML+ GFE I+ I+ +D RQTLMF+AT+P E++ LAS F+ + + +S+G
Sbjct: 262 DEADRMLEKGFEEDIKNIIRETD---ASKRQTLMFTATWPKEVRELASTFMNNPIKVSIG 318
Query: 383 RVGSTSEN--ITQKILYVEDFDKNDTLLDLLAASNEG-----LTLIFVETKRAADSLTDF 435
+ N ITQ + V+ K LL+LL + G LIF K+ A +
Sbjct: 319 NTDQLTANKRITQIVEVVDPRGKERKLLELLKKYHSGPKKNEKVLIFALYKKEAARVERN 378
Query: 436 LIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPN 495
L G+ AIHGD +Q +R +AL+ FK+G++ +L+AT VAARGLDIPNV VIN P
Sbjct: 379 LKYNGYNVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFPL 438
Query: 496 DIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFL 546
++DYVHRIGRTGRAG TG A T F K++A LV++L+ ANQ VP L
Sbjct: 439 TVEDYVHRIGRTGRAGQTGTAHTLFTEQEKHLAGGLVNVLNGANQPVPEDL 489
>SPCC10H11.01 [A] KOG0334 RNA helicase
Length = 1014
Score = 273 bits (699), Expect = 4e-73
Identities = 156/410 (38%), Positives = 232/410 (56%), Gaps = 21/410 (5%)
Query: 147 VEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTG 206
++ G D P+P++ + L + I + KPT +Q ++P + +GRD++ A+TG
Sbjct: 406 IKIRGIDCPKPVTSWSQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTG 465
Query: 207 SGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFT 266
SGKT FL P+ P T E P A+I+ PTRELA QI+ E K F
Sbjct: 466 SGKTIAFLLPMFRHIKDQRPLKTGEG----------PIAIIMTPTRELAVQIFRECKPFL 515
Query: 267 YRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLER---RYISLANVKYLVLD 323
++ YGGA I +QI ++ G ++V TPGR+ D+L R +L YLVLD
Sbjct: 516 KLLNIRACCAYGGAPIKDQIADLKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLD 575
Query: 324 EADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGR 383
EADRM D+GFEPQ+ RI+ +RQT++FSATFP ++ LA LK V ++VG
Sbjct: 576 EADRMFDLGFEPQVMRIINNIR----PDRQTVLFSATFPRAMEALARKVLKKPVEITVGG 631
Query: 384 VGSTSENITQKILYVEDFDKNDTLLDLLAAS-NEGL---TLIFVETKRAADSLTDFLIME 439
+ + Q + + K LL+LL N L TL+FV+ + +AD+L L+
Sbjct: 632 RSVVASEVEQIVEVRPEESKFSRLLELLGELYNNQLDVRTLVFVDRQESADALLSDLMKR 691
Query: 440 GFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDD 499
G+ + +IHG + Q +R+ +S +K G +L+AT+V ARGLD+ ++ V+N+D PN ++D
Sbjct: 692 GYTSNSIHGGKDQHDRDSTISDYKAGVFDVLIATSVVARGLDVKSLQLVVNYDCPNHMED 751
Query: 500 YVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFLTTI 549
YVHR+GRTGRAG+TGVA TF + A ++ L + Q VP L T+
Sbjct: 752 YVHRVGRTGRAGHTGVAVTFITPEQEKYAVDIAKALKMSKQPVPKELQTL 801
>Hs7662318 [A] KOG0334 RNA helicase
Length = 1032
Score = 272 bits (696), Expect = 1e-72
Identities = 163/439 (37%), Positives = 238/439 (54%), Gaps = 23/439 (5%)
Query: 109 KHVPAAKNANLELELFGVAEDKSFQSSGINFDNYDDIPVEASGNDVPEPISEFHSPPLDP 168
++ P KN +E V E +N + + G P+PI + +
Sbjct: 327 EYEPFRKNFYVE-----VPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISM 381
Query: 169 LLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPAS 228
+L+++K + KPTP+Q ++P + +GRDL+ A+TGSGKT FL P+ S
Sbjct: 382 KILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQ--RS 439
Query: 229 TPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQ 288
E G P AVI+ PTRELA QI E KKF+ ++ + VYGG I QI +
Sbjct: 440 LEEGEG--------PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAE 491
Query: 289 MRYGCNLLVATPGRLTDLLER---RYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSD 345
++ G ++V TPGR+ D+L R +L V Y+VLDEADRM DMGFEPQ+ RIV+
Sbjct: 492 LKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVR 551
Query: 346 MPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKND 405
+RQT+MFSATFP ++ LA L + + VG ++ Q+++ +E+ K
Sbjct: 552 ----PDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFL 607
Query: 406 TLLDLLAASNE-GLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKT 464
LL+LL E G +IFV+ + AD L L+ + ++HG Q +R+ ++ FK
Sbjct: 608 KLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKN 667
Query: 465 GRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGN 524
G +LVAT+VAARGLD+ ++ V+N+ PN +DYVHR GRTGRAGN G A TF
Sbjct: 668 GTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQ 727
Query: 525 KNVAKELVSLLSEANQEVP 543
A +++ L + VP
Sbjct: 728 ARYAGDIIKALELSGTAVP 746
>7298459 [A] KOG0333 U5 snRNP-like RNA helicase subunit
Length = 802
Score = 272 bits (695), Expect = 1e-72
Identities = 154/395 (38%), Positives = 225/395 (55%), Gaps = 27/395 (6%)
Query: 143 DDIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMAC 202
+D V G +P PI ++ ++D I + +PTP+Q+ ++PI RD++
Sbjct: 378 EDYNVTIKGGRIPNPIRSWNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIGV 437
Query: 203 AQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEA 262
A+TGSGKT FL P+LS S E P A+I+APTRELA QI +E
Sbjct: 438 AETGSGKTLAFLIPLLSWIQSLPKIERLEDVDQG------PYAIIMAPTRELAQQIEEET 491
Query: 263 KKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVL 322
KF ++ +VV GG S + Q ++R GC +++ATPGRL D+LE RY+ L Y+VL
Sbjct: 492 TKFGQPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVL 551
Query: 323 DEADRMLDMGFEPQIRRIVEGSDMPSVDN---------------------RQTLMFSATF 361
DEADRM+DMGFEP +++I+E + ++ RQT+MF+AT
Sbjct: 552 DEADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDETKLMENFYTKKKYRQTVMFTATM 611
Query: 362 PSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNEGLTLI 421
P ++ LA +L+ + +G VG +E Q + + + DK L+++L+ + +I
Sbjct: 612 PPAVERLARTYLRRPATVYIGSVGKPTERTEQIVYMMGENDKRKKLMEILSRKIDPPVII 671
Query: 422 FVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLD 481
FV K+ AD L L G+ + +HG + Q +RE AL+A K+G ILVAT VA RG+D
Sbjct: 672 FVNQKKGADVLAKGLEKLGYNSCTLHGGKGQEQREYALAALKSGAKDILVATDVAGRGID 731
Query: 482 IPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVA 516
I +V+ VIN+D+ I+DY HRIGRTGRAG TG A
Sbjct: 732 IKDVSLVINYDMAKTIEDYTHRIGRTGRAGKTGCA 766
>CE23832 [A] KOG0341 DEAD-box protein abstrakt
Length = 630
Score = 269 bits (688), Expect = 8e-72
Identities = 155/408 (37%), Positives = 240/408 (57%), Gaps = 20/408 (4%)
Query: 147 VEASGNDVPEPISEFHSPPLDPLLLDNIKLAR-FTKPTPVQKYSVPIVAAGRDLMACAQT 205
+ G+ +P PI F LL+ ++ + PT +Q +P+ +GRD++ A T
Sbjct: 177 ISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIAST 236
Query: 206 GSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYD----- 260
GSGKT F+ P++ + +++ P +I+ P+RELA QI+D
Sbjct: 237 GSGKTMTFVLPLVMFCLE-------QEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEM 289
Query: 261 -EAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKY 319
+A ++ + GG I Q K +R G +++VATPGRL+D+L ++ I+L +Y
Sbjct: 290 FDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIHIVVATPGRLSDMLTKKIINLEVCRY 349
Query: 320 LVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFL 379
LVLDEADRMLDMGFE +I+ I RQTL+FSAT P +IQ A L + +
Sbjct: 350 LVLDEADRMLDMGFEDEIKSIFYFFKA----QRQTLLFSATMPRKIQFFAKSALVKPIVV 405
Query: 380 SVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIME 439
+VGR G+ S N+ Q++ +V +K +L+ L ++ + LIF E K D++ ++L+++
Sbjct: 406 NVGRAGAASLNVLQELEFVRSENKLVRVLECLQKTSPKV-LIFAEKKVDVDNIYEYLLVK 464
Query: 440 GFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDD 499
G + +IHG + Q +R + AF+ +LVAT VA++GLD + HVINFD+P DI++
Sbjct: 465 GVEVASIHGGKDQSDRHAGIEAFRKNEKDVLVATDVASKGLDFQGIEHVINFDMPEDIEN 524
Query: 500 YVHRIGRTGRAGNTGVATTFFNRGNK-NVAKELVSLLSEANQEVPSFL 546
YVHRIGRTGR+G G+ATTF N+ ++ +V +L LL+EA QE+P FL
Sbjct: 525 YVHRIGRTGRSGRKGLATTFINKKSEMSVLSDLKQLLAEAGQELPEFL 572
>SPCC63.11 [A] KOG0333 U5 snRNP-like RNA helicase subunit
Length = 662
Score = 267 bits (683), Expect = 3e-71
Identities = 156/422 (36%), Positives = 241/422 (56%), Gaps = 25/422 (5%)
Query: 143 DDIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMAC 202
+D + G+D+P P+ + L +L +K + +P+ +Q+ ++P++ +DL+
Sbjct: 233 EDYNISIKGDDLPNPLRNWEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPVLLQRKDLIGI 292
Query: 203 AQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEA 262
A+TGSGKT F+ P++ + S P P N ++ P AV+LAPTRELA QI E
Sbjct: 293 AETGSGKTAAFIIPLII-AISKLP---PLTESNMHLG---PYAVVLAPTRELAQQIQVEG 345
Query: 263 KKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVL 322
KF + + V GG + + Q QM G +++VATPGRL D LERR L+ Y+V+
Sbjct: 346 NKFAEPLGFRCVSVVGGHAFEEQSFQMSQGAHIVVATPGRLLDCLERRLFVLSQCTYVVM 405
Query: 323 DEADRMLDMGFEPQIRRIV-----------EGSDMPSVDN----RQTLMFSATFPSEIQH 367
DEADRMLDMGFE + +I+ +GS + + ++ RQT+MFSAT P + +
Sbjct: 406 DEADRMLDMGFEDDVNKILSSLPSSNASEKDGSILATANSSSSRRQTIMFSATLPPRVAN 465
Query: 368 LASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNEGLT--LIFVET 425
LA +L + V L++G +G + + Q++ + D K ++ + SN +IFV
Sbjct: 466 LAKSYLIEPVMLTIGNIGQAVDRVEQRVEMISDDSKKWRRVEEILESNRFSPPIIIFVNL 525
Query: 426 KRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNV 485
KR +++ L G+ A +HG ++Q +RERA+ + A ILVAT +A RG+DIPNV
Sbjct: 526 KRNIEAIAKQLNAIGWHAVTLHGSKSQEQRERAIEQLRNKTADILVATDIAGRGIDIPNV 585
Query: 486 THVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLS-EANQEVPS 544
+ V+N+++ I+DY HRIGRTGRAG +G A TF + +V +L LLS A +P
Sbjct: 586 SLVLNYNMAKSIEDYTHRIGRTGRAGKSGTAITFLGPEDTDVYYDLRVLLSRSAKAHIPD 645
Query: 545 FL 546
L
Sbjct: 646 EL 647
>7293060 [A] KOG0334 RNA helicase
Length = 1224
Score = 263 bits (672), Expect = 6e-70
Identities = 147/410 (35%), Positives = 230/410 (55%), Gaps = 18/410 (4%)
Query: 147 VEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTG 206
++ G P+PI + + ++ ++ F KPTP+Q ++P + +GRDL+ A+TG
Sbjct: 498 IQVKGKGCPKPIKTWAQCGVSKKEMEVLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAKTG 557
Query: 207 SGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFT 266
SGKT F+ P+ + A A+I+APTREL QI + +KF+
Sbjct: 558 SGKTLAFILPMFRHILDQPSMEDGDGA----------IAIIMAPTRELCMQIGKDIRKFS 607
Query: 267 YRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLER---RYISLANVKYLVLD 323
++P+ VYGG I QI +++ G ++V TPGR+ D+L R +L V Y+VLD
Sbjct: 608 KSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 667
Query: 324 EADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGR 383
EADRM DMGFEPQ+ RI++ +RQT+MFSATFP +++ LA LK + + VG
Sbjct: 668 EADRMFDMGFEPQVMRIIDNVR----PDRQTVMFSATFPRQMEALARRILKKPIEVIVGG 723
Query: 384 VGSTSENITQKILYVEDFDKNDTLLDLLAASNE-GLTLIFVETKRAADSLTDFLIMEGFK 442
+ + Q ++ + D K LL+LL E G ++FV+ + AD L L+ +
Sbjct: 724 RSVVCKEVEQHVVILNDDAKFFKLLELLGIYQEAGSIIVFVDKQENADILLRDLMKASYP 783
Query: 443 ATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVH 502
++HG Q +R+ + FK+G+ +L+AT+VAARGLD+ ++ V+N+D+PN +DYVH
Sbjct: 784 CMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVH 843
Query: 503 RIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFLTTIMRE 552
R GRTGRAG G A TF A +++ + + +P+ L + E
Sbjct: 844 RCGRTGRAGKKGSAYTFITPEQSRYAGDIIRAMDLSGTLIPAELQALWTE 893
>CE22474 [A] KOG0336 ATP-dependent RNA helicase
Length = 504
Score = 263 bits (671), Expect = 8e-70
Identities = 156/406 (38%), Positives = 240/406 (58%), Gaps = 16/406 (3%)
Query: 148 EASGNDVPEPISEFHSP-PLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTG 206
E S +P P++ F + ++ I+ F KP+P+Q P++ +G+D + +QTG
Sbjct: 72 EESTVKIPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTG 131
Query: 207 SGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFT 266
SGKT FL P L A + N +K P ++L+PTRELA QI E KK++
Sbjct: 132 SGKTLAFLLPALLHI----DAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYS 187
Query: 267 YRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEAD 326
Y + K + +YGG S Q++ R G +++ATPGRLTDL ISLA+V Y+VLDEAD
Sbjct: 188 YNGY-KSVCLYGGGSRPEQVEACRGGVEIVIATPGRLTDLSNDGVISLASVTYVVLDEAD 246
Query: 327 RMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGS 386
RMLDMGFE IRRI+ +R + SAT+P ++ L + K+ V G +
Sbjct: 247 RMLDMGFEVAIRRIL----FEIRPDRLVALTSATWPEGVRKLTDKYTKEAVMAVNGSLDL 302
Query: 387 TS-ENITQKILYVED---FDKNDTLLDLLAASN--EGLTLIFVETKRAADSLTDFLIMEG 440
TS +++TQ +V F + +++ L A++ +IFV++K AD L+ M+G
Sbjct: 303 TSCKSVTQFFEFVPHDSRFLRVCEIVNFLTAAHGQNYKMIIFVKSKVMADHLSSDFCMKG 362
Query: 441 FKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDY 500
+ +HG R+Q +RE +L+ ++G ILVAT +A+RG+D+P++THV+N+D P DI++Y
Sbjct: 363 INSQGLHGGRSQSDREMSLNMLRSGEVQILVATDLASRGIDVPDITHVLNYDFPMDIEEY 422
Query: 501 VHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFL 546
VHR+GRTGRAG G A +F +++ + L+ +L ++ QEVP L
Sbjct: 423 VHRVGRTGRAGRKGEAMSFLWWNDRSNFEGLIQILEKSEQEVPDQL 468
>Hs22057246 [A] KOG0336 ATP-dependent RNA helicase
Length = 631
Score = 262 bits (669), Expect = 1e-69
Identities = 149/402 (37%), Positives = 229/402 (56%), Gaps = 17/402 (4%)
Query: 154 VPEPISEFHSPPLD-PLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGG 212
+P+P F P LL +I KPTP+Q + PI+ G DL+ AQTG+GKT
Sbjct: 216 IPKPTCRFKDAFQQYPDLLKSIIRVGIVKPTPIQSQAWPIILQGIDLIVVAQTGTGKTLS 275
Query: 213 FLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVK 272
+L P S P S + G P ++L PTRELA + E K++Y+ +K
Sbjct: 276 YLMPGFIH-LDSQPISREQRNG--------PGMLVLTPTRELALHVEAECSKYSYKG-LK 325
Query: 273 PMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMG 332
+ +YGG + + QI+ + G ++++ATPGRL DL ++L ++ YLV+DEAD+MLDM
Sbjct: 326 SICIYGGRNRNGQIEDISKGVDIIIATPGRLNDLQMNNSVNLRSITYLVIDEADKMLDME 385
Query: 333 FEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSEN-I 391
FEPQIR+I+ + +RQT+M SAT+P ++ LA +LKD + + VG + + N +
Sbjct: 386 FEPQIRKIL----LDVRPDRQTVMTSATWPDTVRQLALSYLKDPMIVYVGNLNLVAVNTV 441
Query: 392 TQKILYVEDFDKNDTLLDLLA-ASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDR 450
Q I+ + +K + + S ++FV K AD L+ ++G A ++HG+
Sbjct: 442 KQNIIVTTEKEKRALTQEFVENMSPNDKVIMFVSQKHIADDLSSDFNIQGISAESLHGNS 501
Query: 451 TQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRA 510
Q ++ERA+ FK+G IL+ T + +RGLD+ +VTHV N+D P +ID YVHR+G GR
Sbjct: 502 EQSDQERAVEDFKSGNIKILITTDIVSRGLDLNDVTHVYNYDFPRNIDVYVHRVGYIGRT 561
Query: 511 GNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFLTTIMRE 552
G TG + T + + +A EL+ +L ANQ VP L + +
Sbjct: 562 GKTGTSVTLITQRDSKMAGELIKILDRANQSVPEDLVVMAEQ 603
>CE28031 [A] KOG0334 RNA helicase
Length = 747
Score = 261 bits (666), Expect = 3e-69
Identities = 156/415 (37%), Positives = 228/415 (54%), Gaps = 20/415 (4%)
Query: 147 VEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTG 206
+ G D P+PI + ++ +++ +K ++KPT +Q ++P + +GRD++ A+TG
Sbjct: 292 ITVKGIDCPKPIKTWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTG 351
Query: 207 SGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFT 266
SGKT FL P+ + P AVILAPTRELA Q Y EA KF
Sbjct: 352 SGKTLAFLLPMFRHILDQPELEEGDG----------PIAVILAPTRELAMQTYKEANKFA 401
Query: 267 YRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLER---RYISLANVKYLVLD 323
+K YGG I QI ++ G ++V TPGR+ D+L + +L V YLVLD
Sbjct: 402 KPLGLKVACTYGGVGISEQIADLKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVTYLVLD 461
Query: 324 EADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGR 383
EADRM D GFEPQI ++V ++QT++FSATFP ++ LA L V + VG
Sbjct: 462 EADRMFDKGFEPQIMKVVNNIR----PDKQTVLFSATFPRHMEALARKVLDKPVEILVGG 517
Query: 384 VGSTSENITQKILYVEDFDKNDTLLDLLAAS-NEGLTLIFVETKRAADSLTDFLIMEGFK 442
+ITQ + + K LL+LL EG +++FV+ + AD + D L+ G+
Sbjct: 518 KSVVCSDITQNAVICAEHQKFLKLLELLGMYYEEGSSIVFVDKQEKADDIVDQLMRTGYN 577
Query: 443 ATA-IHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYV 501
+ A +HG Q +R+ +++ FKTG +LVAT+VAARGLD+ N+ V+N+D PN +DYV
Sbjct: 578 SVAPLHGGIDQHDRDSSIADFKTGVIKVLVATSVAARGLDVKNLILVVNYDCPNHYEDYV 637
Query: 502 HRIGRTGRAGNTGVATTF-FNRGNKNVAKELVSLLSEANQEVPSFLTTIMREASS 555
HR+GRTGRAG G A TF + +A E+ A + P+ L + S
Sbjct: 638 HRVGRTGRAGRKGYAYTFVLPEHQEKMAGEICRAFETAGCKPPADLKAMFERFKS 692
>CE27427 [A] KOG0334 RNA helicase
Length = 970
Score = 261 bits (666), Expect = 3e-69
Identities = 156/415 (37%), Positives = 228/415 (54%), Gaps = 20/415 (4%)
Query: 147 VEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTG 206
+ G D P+PI + ++ +++ +K ++KPT +Q ++P + +GRD++ A+TG
Sbjct: 292 ITVKGIDCPKPIKTWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTG 351
Query: 207 SGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFT 266
SGKT FL P+ + P AVILAPTRELA Q Y EA KF
Sbjct: 352 SGKTLAFLLPMFRHILDQPELEEGDG----------PIAVILAPTRELAMQTYKEANKFA 401
Query: 267 YRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLER---RYISLANVKYLVLD 323
+K YGG I QI ++ G ++V TPGR+ D+L + +L V YLVLD
Sbjct: 402 KPLGLKVACTYGGVGISEQIADLKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVTYLVLD 461
Query: 324 EADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGR 383
EADRM D GFEPQI ++V ++QT++FSATFP ++ LA L V + VG
Sbjct: 462 EADRMFDKGFEPQIMKVVNNIR----PDKQTVLFSATFPRHMEALARKVLDKPVEILVGG 517
Query: 384 VGSTSENITQKILYVEDFDKNDTLLDLLAAS-NEGLTLIFVETKRAADSLTDFLIMEGFK 442
+ITQ + + K LL+LL EG +++FV+ + AD + D L+ G+
Sbjct: 518 KSVVCSDITQNAVICAEHQKFLKLLELLGMYYEEGSSIVFVDKQEKADDIVDQLMRTGYN 577
Query: 443 ATA-IHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYV 501
+ A +HG Q +R+ +++ FKTG +LVAT+VAARGLD+ N+ V+N+D PN +DYV
Sbjct: 578 SVAPLHGGIDQHDRDSSIADFKTGVIKVLVATSVAARGLDVKNLILVVNYDCPNHYEDYV 637
Query: 502 HRIGRTGRAGNTGVATTF-FNRGNKNVAKELVSLLSEANQEVPSFLTTIMREASS 555
HR+GRTGRAG G A TF + +A E+ A + P+ L + S
Sbjct: 638 HRVGRTGRAGRKGYAYTFVLPEHQEKMAGEICRAFETAGCKPPADLKAMFERFKS 692
>CE17559 [A] KOG0339 ATP-dependent RNA helicase
Length = 811
Score = 259 bits (663), Expect = 7e-69
Identities = 159/411 (38%), Positives = 226/411 (54%), Gaps = 18/411 (4%)
Query: 147 VEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTG 206
+ G P P+ F D LL++ I+ + + +PTP+Q ++P +GRD++ A+TG
Sbjct: 253 LRVGGLKPPRPVCSFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTG 312
Query: 207 SGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFT 266
SGKT +L+P + E P AVI+ PTRELA Q++ EAKKF
Sbjct: 313 SGKTAAYLWPAIVHIMDQPDLKAGEG----------PVAVIVVPTRELAIQVFQEAKKFC 362
Query: 267 YRSWVKPMVVYGGASIDNQIKQMRY-GCNLLVATPGRLTDLLERRYISLANVKYLVLDEA 325
+ P+ YGG S Q +++ G ++V TPGR+ DL++ + +LV DEA
Sbjct: 363 KVYNINPICAYGGGSKWEQSNELQNEGAEMVVCTPGRIIDLVKMGATNFLRTTFLVFDEA 422
Query: 326 DRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVG 385
DRM DMGFE Q++ I SD D RQ LMFSATF +++ LA D L D V + G VG
Sbjct: 423 DRMFDMGFEAQVKSI---SDHVRPD-RQCLMFSATFKQKVERLARDALVDPVRIVQGEVG 478
Query: 386 STSENITQKILYVEDFDKNDTLL--DLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKA 443
+ +I QK+ +++ D L +L+ ++ G LIFV K ++ + L M+ F
Sbjct: 479 EANADIEQKVFVMQNQDVKLHWLIRNLVEFASLGKVLIFVTKKLDSEDVAKKLKMKDFDI 538
Query: 444 TAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHR 503
+HGD Q ER L F+ ++ ILVAT VAARGLDI + VINFD+ DID +VHR
Sbjct: 539 VLLHGDMLQAERNENLLKFRK-KSQILVATDVAARGLDISEIRTVINFDMARDIDTHVHR 597
Query: 504 IGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFLTTIMREAS 554
IGRTGRAG+ G A T + + LV L +QEVP L + ++S
Sbjct: 598 IGRTGRAGHKGTAYTLVTEKDIEMVGHLVKNLESVSQEVPKPLMDLAMKSS 648
>At3g09620 [A] KOG0334 RNA helicase
Length = 989
Score = 259 bits (663), Expect = 7e-69
Identities = 150/404 (37%), Positives = 223/404 (55%), Gaps = 47/404 (11%)
Query: 144 DIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACA 203
++ ++ G DVP PI +H L +LD +K + KP P+Q ++PI+ +GRD + A
Sbjct: 381 ELELKVHGKDVPRPIQFWHQTGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVA 440
Query: 204 QTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAK 263
+TGSGKT GF+ P+L P + P +++APTREL QIY + +
Sbjct: 441 KTGSGKTLGFVLPMLRHIKDQPPVEAGDG----------PIGLVMAPTRELVQQIYSDIR 490
Query: 264 KFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLL---ERRYISLANVKYL 320
KF+ + + VYGG+ + QI +++ G ++V TPGR+ D+L + +L V YL
Sbjct: 491 KFSKALGIICVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYL 550
Query: 321 VLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLS 380
V+DEADRM DMGFEPQI RIV+ +RQT++FSATFP +++ LA L V +
Sbjct: 551 VMDEADRMFDMGFEPQITRIVQNIR----PDRQTVLFSATFPRQVETLARKVLNKPVEIQ 606
Query: 381 VGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNE-GLTLIFVETKRAADSLTDFLIME 439
VG +++ITQ + + ++ LL+LL E G L+FV +
Sbjct: 607 VGGRSVVNKDITQLVEIRPESERFSRLLELLGEWYEKGKVLVFVRS-------------- 652
Query: 440 GFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDD 499
+E+++S FK+ +L+AT+VAARGLD+ + V+NFD PN +D
Sbjct: 653 ---------------QEKSISDFKSDVCNLLIATSVAARGLDVKELELVVNFDAPNHYED 697
Query: 500 YVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVP 543
YVHR+GRTGRAG G A TF + + A +LV L + Q VP
Sbjct: 698 YVHRVGRTGRAGRKGCAVTFISEDDAKYAPDLVKALELSEQPVP 741
>SPBC17D1.06 [A] KOG0331 ATP-dependent RNA helicase
Length = 578
Score = 259 bits (662), Expect = 9e-69
Identities = 169/443 (38%), Positives = 247/443 (55%), Gaps = 31/443 (6%)
Query: 112 PAAKNANLELELFGVAEDKSFQSSGINFDNYDDIPVEASGNDVPEPISEFHSPPLDPLLL 171
PA +AN A D+ + I+F + ++ PI +F + L
Sbjct: 127 PAIGSANASNHNDEEAYDRYIKKHNISF-------ADPKSSENLLPILQFDELDVSAKLR 179
Query: 172 DNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPE 231
+ +K + +PTP+Q + P + AGRD++ A+TGSGKT F P L + +G +
Sbjct: 180 EGLK--NYKEPTPIQAATWPYLLAGRDVVGIAETGSGKTVAFGIPALQ--YLNGLSDN-- 233
Query: 232 AAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRY 291
K P ++++PTRELA Q Y+ + +K +VVYGGA Q + +
Sbjct: 234 --------KSVPRVLVVSPTRELAIQTYENLNSLIQGTNLKAVVVYGGAPKSEQARAAK- 284
Query: 292 GCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVD- 350
++++ TPGRL DL+ I + V YLVLDEADRMLD GFE IR I+ + P+ +
Sbjct: 285 NASVIIGTPGRLLDLINDGSIDCSQVGYLVLDEADRMLDTGFEQDIRNIISHTPDPTRNG 344
Query: 351 NRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVG-STSENITQKILYVEDFDKNDTLLD 409
+RQT+ FSAT+P ++ LA+ FLKD V +++G + S+NITQ + ++D + +LD
Sbjct: 345 SRQTVFFSATWPESVRALAATFLKDPVKITIGSDELAASQNITQIVEILDDPRSKERMLD 404
Query: 410 ------LLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFK 463
L + + LIFV K+ A + L + + IHGD +QG R +AL+ FK
Sbjct: 405 NLLRKHLSSGGKDDKILIFVLYKKEAARVEGTLARK-YNVVGIHGDMSQGARLQALNDFK 463
Query: 464 TGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRG 523
+G+ +LVAT VAARGLDIP V VIN P I+DYVHRIGRTGRA G A TFF
Sbjct: 464 SGKCPVLVATDVAARGLDIPKVQLVINVTFPLTIEDYVHRIGRTGRANTKGTAITFFTPQ 523
Query: 524 NKNVAKELVSLLSEANQEVPSFL 546
+K+ A ELV++L +A Q++P L
Sbjct: 524 DKSHAGELVNVLRQAKQDIPEGL 546
>Hs18595975 [A] KOG0335 ATP-dependent RNA helicase
Length = 468
Score = 250 bits (638), Expect = 5e-66
Identities = 140/273 (51%), Positives = 178/273 (64%), Gaps = 1/273 (0%)
Query: 250 PTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLER 309
P +E Y+E +KF+Y+ V P VVYG A I QI+ + +GC+LLVATPG L DL+ER
Sbjct: 196 PQQENWLYRYEEVRKFSYQPRVHPCVVYGDADIGQQIQVLEHGCHLLVATPGGLVDLMER 255
Query: 310 RYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLA 369
I L KYLVLDEADRMLDMGF PQI I+E MP +MFSATFP+EIQ LA
Sbjct: 256 GKIGLDFCKYLVLDEADRMLDMGFGPQIHLILEQDTMPLKGIHHIMMFSATFPNEIQMLA 315
Query: 370 SDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLL-AASNEGLTLIFVETKRA 428
DFL +Y+FL+VGRVGSTSE ITQ++++VE+ DK LLDLL A + LTL+FVETK+
Sbjct: 316 RDFLDEYIFLAVGRVGSTSETITQEVVWVEEPDKRSFLLDLLNAPGKDSLTLVFVETKKG 375
Query: 429 ADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHV 488
DSL +FL E + T+IHGD++Q +RE S+ G + +
Sbjct: 376 EDSLENFLYHEVYPCTSIHGDQSQRDREGGPSSVLLGENPNSSGYSCGSMKTRHFKCETC 435
Query: 489 INFDLPNDIDDYVHRIGRTGRAGNTGVATTFFN 521
NFDLP+DI++YV IG TG G G+AT+FFN
Sbjct: 436 FNFDLPSDIEEYVPCIGCTGCVGIQGLATSFFN 468
>CE29052 [A] KOG0335 ATP-dependent RNA helicase
Length = 1156
Score = 244 bits (622), Expect = 4e-64
Identities = 167/448 (37%), Positives = 244/448 (54%), Gaps = 41/448 (9%)
Query: 128 EDKSFQSSGINFDNYD-DIPVEASGNDVPEP----ISEFHSPPLDPLLLDNIKLARFTKP 182
+DK F+ + N D D D V AS V P F P D L DN+K + +P
Sbjct: 702 DDKMFEDAVNNDDKIDFDQKVVASTGKVEIPDMASFDGFKILPQD--LHDNLKRMKMNRP 759
Query: 183 TPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPV---LSESFSSGPASTPEAAGNSYIK 239
TP+Q+ S + G D++ACA TGSGKT FL P L E F T E
Sbjct: 760 TPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDE-------- 811
Query: 240 KVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRY--GCNLLV 297
K P +I+APTREL Q + A++ TY + +K + +GG S + ++ +R N+LV
Sbjct: 812 KPSPRLLIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILV 871
Query: 298 ATPGRLTDLLERRYISLANVKYLVLDEADRMLDMG-FEPQIRRIVEGSDMPSVDNRQTLM 356
AT GRL D + +SL+ +KY+VLDEADRM+D F ++ +I+ GS P +QT++
Sbjct: 872 ATMGRLQDFVNAGEVSLSKMKYIVLDEADRMVDSNDFGEEVSKII-GS--PGERTQQTVL 928
Query: 357 FSATFPSEIQH--LASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAAS 414
FSA+F ++Q L + Y L V + G+ +E I QKIL V +K D + LL
Sbjct: 929 FSASFSEDLQSDDLPKFVKEGYTMLQVDKFGTANEKIDQKILPVPRTEKRDAIYKLLGID 988
Query: 415 NEGLTL------------IFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAF 462
+TL IFV + + D+L + G ++H + Q +R+R L F
Sbjct: 989 ENTVTLLPDAPIEKQKTLIFVNSVKFCDTLAALISSAGVSTISMHSYQNQEQRDRTLDDF 1048
Query: 463 KTGRATILVATAVAARGLDIPNVTHVINFDLP--NDIDDYVHRIGRTGRAGNTGVATTFF 520
+ G+ +VA+ V ARGL+I + HV+N+D+P N D+YV+RIGRTGRAG TG +T F
Sbjct: 1049 RRGKYQCMVASNVCARGLNIAGLDHVVNYDMPDKNGFDEYVNRIGRTGRAGFTGTSTAFV 1108
Query: 521 N-RGNKNVAKELVSLLSEANQEVPSFLT 547
+ + ++ LVS+L+EA +EVP +LT
Sbjct: 1109 DVENDTDIIPCLVSILNEAKKEVPEWLT 1136
>YDR243c [A] KOG0333 U5 snRNP-like RNA helicase subunit
Length = 588
Score = 241 bits (616), Expect = 2e-63
Identities = 152/407 (37%), Positives = 228/407 (55%), Gaps = 27/407 (6%)
Query: 143 DDIPVEASGNDVPEPISEFHSPPLDP--LLLDNIKLARFTKPTPVQKYSVPIVA---AGR 197
+D + G V P+ + + P LL I+ RF PTP+Q+ ++P V R
Sbjct: 156 EDYAIVTKGGTVENPLRNWEELNIIPRDLLRVIIQELRFPSPTPIQRITIPNVCNMKQYR 215
Query: 198 DLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVY--PTAVILAPTRELA 255
D + A TGSGKT F+ P+L + S P P K+ P A+ILAPTREL
Sbjct: 216 DFLGVASTGSGKTLAFVIPILIK-MSRSPPRPPSL-------KIIDGPKALILAPTRELV 267
Query: 256 TQIYDEAKKFTYRSWVKP-------MVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLE 308
QI E +K T + W K + + GG S++ + GC++LVATPGRL D LE
Sbjct: 268 QQIQKETQKVT-KIWSKESNYDCKVISIVGGHSLEEISFSLSEGCDILVATPGRLIDSLE 326
Query: 309 RRYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDM--PSVDNRQTLMFSATFPSEIQ 366
+ + V+ LVLDEAD+M+D+GFE Q+ I+ D+ S NRQTLMF+AT I+
Sbjct: 327 NHLLVMKQVETLVLDEADKMIDLGFEDQVTNILTKVDINADSAVNRQTLMFTATMTPVIE 386
Query: 367 HLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNEGLTLIFVETK 426
+A+ +++ V+ ++G + I Q + Y ++ + L + A + +IF+ K
Sbjct: 387 KIAAGYMQKPVYATIGVETGSEPLIQQVVEYADNDEDKFKKLKPIVAKYDPPIIIFINYK 446
Query: 427 RAADSLTDFLIME-GFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNV 485
+ AD L + E K T +HG ++Q +RE +L F+T + I++AT VAARGLDIPNV
Sbjct: 447 QTADWLAEKFQKETNMKVTILHGSKSQEQREHSLQLFRTNKVQIMIATNVAARGLDIPNV 506
Query: 486 THVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRG-NKNVAKEL 531
+ V+NF + +DDY+HRIGRTGRA N G A +F + ++++ +EL
Sbjct: 507 SLVVNFQISKKMDDYIHRIGRTGRAANEGTAVSFVSAAEDESLIREL 553
>ECU02g0670 [A] KOG0335 ATP-dependent RNA helicase
Length = 503
Score = 230 bits (587), Expect = 4e-60
Identities = 149/394 (37%), Positives = 221/394 (55%), Gaps = 43/394 (10%)
Query: 168 PLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPA 227
PLL+ + ++ PT +QKY +P + GR+L+ A TG GKT FL P++
Sbjct: 107 PLLIKALG-KEYSAPTIIQKYCIPSLVDGRNLICRAPTGMGKTMCFLIPIIER------- 158
Query: 228 STPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIK 287
+ +KK P A I++PTREL QI EA K S ++ + +YG Q
Sbjct: 159 -------HRQMKK--PQACIISPTRELCEQIRVEASKLVAGSRIRVVSIYG----KKQDL 205
Query: 288 QMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMP 347
G +++VATPGRL DLL R+ + L+ ++ VLDEAD++LDMGFE IR I +P
Sbjct: 206 PSYSGVDIVVATPGRLIDLLHRKKVDLSEIRMFVLDEADKLLDMGFEIPIREI--HGFVP 263
Query: 348 SVDNRQTLMFSATFPSEIQHLASDFL-KDYVFLSVGRVGSTSENITQKILYVEDFDKNDT 406
N QT +FSAT+ ++ + + FL +D V + + T +NI Q+I+ V + K
Sbjct: 264 K--NTQTCLFSATYSPKLTRMINYFLPEDKVSIEIS--SETLKNIRQEIVEVRN--KKKM 317
Query: 407 LLDLLAASNEGL------------TLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGE 454
LL++L + L L+FVE K + L G ++HGD+ Q +
Sbjct: 318 LLNILKGPDINLKGSWRMEVQPDKVLVFVERKSECGEVEKVLKKSGILCVSLHGDKEQAD 377
Query: 455 RERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTG 514
R+ AL F+ GR ++VAT+VAARG+DI +V VIN+D+P DI +Y+HRIGRTGR G +G
Sbjct: 378 RDEALKGFRNGRFPVMVATSVAARGIDIKDVKLVINYDIPKDIKEYIHRIGRTGREGKSG 437
Query: 515 VATTFFNRG-NKNVAKELVSLLSEANQEVPSFLT 547
+ +F++ G ++ K LV +L E+ VP FLT
Sbjct: 438 KSISFYDGGMTADLKKALVEVLRESKNAVPPFLT 471
>At3g09720 [A] KOG0344 ATP-dependent RNA helicase
Length = 545
Score = 228 bits (582), Expect = 2e-59
Identities = 141/419 (33%), Positives = 220/419 (51%), Gaps = 36/419 (8%)
Query: 147 VEASGNDVPEPISEFHSPP----LDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMAC 202
+ SGN++P P+ F + +L N+ F +PTP+Q+ ++PI+ +GR+ AC
Sbjct: 125 IHVSGNNIPPPLKSFAELSSRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSGRECFAC 184
Query: 203 AQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEA 262
A TGSGKT F+ P+L + + + AVIL+P RELA Q E
Sbjct: 185 APTGSGKTFAFICPMLIKLKVLNCRPSTDGI----------RAVILSPARELAAQTAREG 234
Query: 263 KK------FTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLAN 316
KK F R KP+V S + C++L++TP RL ++ + I L+
Sbjct: 235 KKLIKGSNFHIRLMTKPLVKTADFS--------KLWCDVLISTPMRLKRAIKAKKIDLSK 286
Query: 317 VKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDY 376
V+YLVLDE+D++ + QI +V+ PS+ +FSAT P ++ LA + D
Sbjct: 287 VEYLVLDESDKLFEQSLLKQIDCVVKACSNPSIIRS---LFSATLPDSVEELARSIMHDA 343
Query: 377 VFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNEGLT---LIFVETKRAADSLT 433
V + +GR + SE + QK+++ + LL L + E L LIFV++K A L
Sbjct: 344 VRVIIGRKNTASETVKQKLVFAGS--EEGKLLALRQSFAESLNPPVLIFVQSKERAKELY 401
Query: 434 DFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDL 493
D L E +A IH D GERE A+ F+ G +L+AT V ARG+D + VIN+D
Sbjct: 402 DELKCENIRAGVIHSDLPPGERENAVDQFRAGEKWVLIATDVIARGMDFKGINCVINYDF 461
Query: 494 PNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFLTTIMRE 552
P+ Y+HRIGR+GRAG +G A TF+ + + + + + + EVPS++ ++ ++
Sbjct: 462 PDSASAYIHRIGRSGRAGRSGEAITFYTEQDVPFLRNIANTMMSSGCEVPSWIMSLKKK 520
>SPAC22F3.08c [A] KOG0344 ATP-dependent RNA helicase
Length = 481
Score = 221 bits (563), Expect = 3e-57
Identities = 132/405 (32%), Positives = 219/405 (53%), Gaps = 25/405 (6%)
Query: 148 EASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGS 207
+ +GN+ +PI EF + +L +N+K T+ T +Q+Y++P + + RDL+ACA TGS
Sbjct: 39 KVTGNNPVDPIEEFP----EGILCENLKKQNITECTTIQRYAIPTIGSKRDLLACAPTGS 94
Query: 208 GKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTY 267
GKT +LFP+L + P A+I+APTREL QIY +A+K ++
Sbjct: 95 GKTIAYLFPILQKLQLHVPGGY--------------RAIIVAPTRELCEQIYRQAEKLSF 140
Query: 268 RSWVKPMVVY-GGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEAD 326
+ +K + + I + ++R ++ + TP RL ++ +S V++ V+DEAD
Sbjct: 141 GTSLKIIELSKSNEKIQEKAPKLREKYDMCIGTPMRLVQAIQTG-LSFEKVEFFVMDEAD 199
Query: 327 RMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGS 386
R+ + GF Q I+ ++ +FSAT PS ++ LA D + + VG +
Sbjct: 200 RLFEPGFIEQTDHILSACTSSNICKS---LFSATIPSRVEELAKVVTVDPIRIIVGLKDA 256
Query: 387 TSENITQKILYVEDFDKNDTLLDLLAASNE--GLTLIFVETKRAADSLTDFLIMEGFKAT 444
+++I Q++L+V +L + ++ E +IFV+ A +L L+ +
Sbjct: 257 ATDSIDQRLLFVGSDTSKIVILRQMISNGELKPRVVIFVQDIERAKALYTELLFDEIHVG 316
Query: 445 AIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRI 504
IHG+ Q +RE AL+ F+ G +L+AT + ARG+D V VINFD P + Y+HRI
Sbjct: 317 VIHGELPQAKREEALAKFRKGEIWVLIATDLLARGIDFHGVKMVINFDFPQSVHSYIHRI 376
Query: 505 GRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFLTTI 549
GRTGRAGNTG A TFF + + K + ++ + EVP+++ +
Sbjct: 377 GRTGRAGNTGQAVTFFTKEDGEYIKLIAGVMRSSGCEVPNWVMAL 421
>At3g22330 [A] KOG0331 ATP-dependent RNA helicase
Length = 620
Score = 219 bits (559), Expect = 8e-57
Identities = 134/384 (34%), Positives = 218/384 (55%), Gaps = 23/384 (5%)
Query: 166 LDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSG 225
+ P ++ + K P+QK + GRD++ A+TG+GKT F P++ +
Sbjct: 111 ISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKY- 169
Query: 226 PASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQ 285
+ G + P ++LAPTRELA Q+ E ++ + + +YGG I Q
Sbjct: 170 --NAKHGRGRN------PLCLVLAPTRELARQVEKEFRESAPS--LDTICLYGGTPIGQQ 219
Query: 286 IKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSD 345
++Q+ YG ++ V TPGR+ DL++R ++L+ V+++VLDEAD+ML +GF + I+E
Sbjct: 220 MRQLDYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILE--K 277
Query: 346 MPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGST----SENITQKILYVEDF 401
+P + RQ++MFSAT PS I+ L +L + L+V VG + ++ IT + + +
Sbjct: 278 LP--EKRQSMMFSATMPSWIRSLTKKYLNNP--LTVDLVGDSDQKLADGITTYSIIADSY 333
Query: 402 DKNDTLLDLLAA-SNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALS 460
+ + L+ + G ++F +TKR AD L+ + + FK A+HGD +Q +RER L+
Sbjct: 334 GRASIIGPLVTEHAKGGKCIVFTQTKRDADRLS-YALARSFKCEALHGDISQSQRERTLA 392
Query: 461 AFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFF 520
F+ G ILVAT VAARGLD+PNV +I+++LPN+ + +VHR GRTGRAG G A +
Sbjct: 393 GFRDGHFNILVATDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIY 452
Query: 521 NRGNKNVAKELVSLLSEANQEVPS 544
++ K + + E+PS
Sbjct: 453 SQDQSRAVKIIEREVGSRFTELPS 476
>YHR065c [A] KOG0330 ATP-dependent RNA helicase
Length = 543
Score = 218 bits (555), Expect = 2e-56
Identities = 137/360 (38%), Positives = 196/360 (54%), Gaps = 19/360 (5%)
Query: 156 EPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLF 215
E F L P L+ K ++KPTP+Q ++P G D++ AQTGSGKT F
Sbjct: 120 ESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAI 179
Query: 216 PVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMV 275
P+L+ + ++ Y A ILAPTRELA QI + V+
Sbjct: 180 PILNRLWHD--------------QEPY-YACILAPTRELAQQIKETFDSLGSLMGVRSTC 224
Query: 276 VYGGASIDNQIKQMRYGCNLLVATPGRLTDLLER-RYISLANVKYLVLDEADRMLDMGFE 334
+ GG ++ +Q + + ++++ATPGRL D LE + SL +K+LV+DEADR+LDM F
Sbjct: 225 IVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFG 284
Query: 335 PQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQK 394
P + RI++ + R T +FSAT S+I L L + V +V T + + Q
Sbjct: 285 PVLDRILK---IIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQT 341
Query: 395 ILYVEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGE 454
++ V KN L+ LL +IF TK A+ L+ + F ATA+HGD Q +
Sbjct: 342 LMVVPGGLKNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQ 401
Query: 455 RERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTG 514
R +L FK G+ +ILVAT VAARGLDIP+V V+N+D+P D Y+HR+GRT RAG +G
Sbjct: 402 RMGSLDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSG 461
>At3g22310 [A] KOG0331 ATP-dependent RNA helicase
Length = 610
Score = 217 bits (553), Expect = 4e-56
Identities = 133/384 (34%), Positives = 218/384 (56%), Gaps = 23/384 (5%)
Query: 166 LDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSG 225
+ P ++ +K K P+QK + GRD++ A+TG+GKT F P++ +
Sbjct: 123 ISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKF- 181
Query: 226 PASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQ 285
+ G + P ++LAPTRELA Q+ E ++ + + +YGG I Q
Sbjct: 182 --NAKHGRGKN------PQCLVLAPTRELARQVEKEFRESAPS--LDTICLYGGTPIGQQ 231
Query: 286 IKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSD 345
++++ YG ++ V TPGR+ DL++R ++L+ V+++VLDEAD+ML +GF + I++
Sbjct: 232 MRELNYGIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQ--K 289
Query: 346 MPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGST----SENITQKILYVEDF 401
+P+ RQ++MFSAT PS I+ L +L + L++ VG + ++ IT + + +
Sbjct: 290 LPA--KRQSMMFSATMPSWIRSLTKKYLNNP--LTIDLVGDSDQKLADGITMYSIAADSY 345
Query: 402 DKNDTLLDLLAASNEG-LTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALS 460
+ + L+ +G ++F +TKR AD L F + + +K A+HGD +Q +RER L+
Sbjct: 346 GRASIIGPLVKEHGKGGKCIVFTQTKRDADRLA-FGLAKSYKCEALHGDISQAQRERTLA 404
Query: 461 AFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFF 520
F+ G +ILVAT VAARGLD+PNV VI+++LPN+ + +VHR GRTGRAG G A
Sbjct: 405 GFRDGNFSILVATDVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIH 464
Query: 521 NRGNKNVAKELVSLLSEANQEVPS 544
+ K + + E+PS
Sbjct: 465 GQDQTRAVKMIEKEVGSRFNELPS 488
>CE09901 [J] KOG0328 Predicted ATP-dependent RNA helicase FAL1 involved in
rRNA maturation DEAD-box superfamily
Length = 399
Score = 213 bits (542), Expect = 7e-55
Identities = 141/417 (33%), Positives = 216/417 (50%), Gaps = 20/417 (4%)
Query: 135 SGINFDNYDDIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVA 194
+G + D VE ++ I F L LL I F KP+ +Q+ +VP +
Sbjct: 2 AGKKAEKDDMATVEFESSEEVNVIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAIL 61
Query: 195 AGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTREL 254
RD++A AQ+G+GKT F VL +S + T A+IL+PTREL
Sbjct: 62 KARDVIAQAQSGTGKTATFSISVL-QSLDTQVRETQ--------------ALILSPTREL 106
Query: 255 ATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISL 314
A QI V+ GG ++ I+++ YG +++ TPGR+ D++ RR +
Sbjct: 107 AVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRT 166
Query: 315 ANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLK 374
+K LVLDEAD ML+ GF+ Q+ I +P Q ++ SAT P EI + S F+
Sbjct: 167 RAIKLLVLDEADEMLNKGFKEQLYDIYRY--LPP--GAQVVLLSATLPHEILEMTSKFMT 222
Query: 375 DYVFLSVGRVGSTSENITQKILYVEDFD-KNDTLLDLLAASNEGLTLIFVETKRAADSLT 433
D + + V R T E I Q + V+ + K DTL+DL ++F T+R D LT
Sbjct: 223 DPIRILVKRDELTLEGIKQFFVAVDREEWKFDTLIDLYDTLTITQAVLFCNTRRKVDWLT 282
Query: 434 DFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDL 493
D + F +++HGD Q +R+ + F+ G +L++T V ARGLD+P V+ VIN+DL
Sbjct: 283 DKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSLVINYDL 342
Query: 494 PNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFLTTIM 550
PN+ + Y+HRIGR+GR G GVA F + + + +++ S E+P + I+
Sbjct: 343 PNNRELYIHRIGRSGRFGRKGVAINFVKQDDVRILRDIEQYYSTQIDEMPMNIADII 399
>YGL171w [A] KOG0344 ATP-dependent RNA helicase
Length = 564
Score = 211 bits (537), Expect = 3e-54
Identities = 133/412 (32%), Positives = 219/412 (52%), Gaps = 33/412 (8%)
Query: 150 SGNDVPEPISEFHSP----PLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQT 205
SG D+P PI F D LL+N+ FT+PTP+Q +P+ RD++AC T
Sbjct: 109 SGIDIPLPIGSFEDLISRFSFDKRLLNNLIENGFTEPTPIQCECIPVALNNRDVLACGPT 168
Query: 206 GSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKF 265
GSGKT FL P++ + + AG +I++PT+ELA QI+ E K
Sbjct: 169 GSGKTLAFLIPLVQQIIDD-----KQTAGLK--------GLIISPTKELANQIFIECFKL 215
Query: 266 TYRSWV---KPMVVYG-----GASIDNQI-KQMRYGCNLLVATPGRLTDLLERRYISLAN 316
+Y+ ++ +P+ V GA + N++ +Y +++++TP RL D+++ + L+
Sbjct: 216 SYKIFLEKKRPLQVALLSKSLGAKLKNKVVSDKKY--DIIISTPLRLIDVVKNEALDLSK 273
Query: 317 VKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDY 376
VK+L+ DEAD++ D F Q I+ PS+ + MFSAT PS ++ +A + D
Sbjct: 274 VKHLIFDEADKLFDKTFVEQSDDILSACREPSL---RKAMFSATIPSNVEEIAQSIMMDP 330
Query: 377 VFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNEGLT--LIFVETKRAADSLTD 434
V + +G + + NI QK+++ + + + L E +IF+E+ A +L
Sbjct: 331 VRVIIGHKEAANTNIEQKLIFCGNEEGKLIAIRQLVQEGEFKPPIIIFLESITRAKALYH 390
Query: 435 FLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLP 494
L+ + IH +RT +R+R + FKTG L+ T V ARG+D V VIN+D+P
Sbjct: 391 ELMYDRINVDVIHAERTALQRDRIIERFKTGELWCLICTDVLARGIDFKGVNLVINYDVP 450
Query: 495 NDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFL 546
YVHRIGRTGR G +G A TF+ + + K +++++ ++ EV ++
Sbjct: 451 GSSQAYVHRIGRTGRGGRSGKAITFYTKQDSVAIKPIINVMKQSGCEVSEWM 502
>Hs13775232 [A] KOG0331 ATP-dependent RNA helicase
Length = 580
Score = 211 bits (537), Expect = 3e-54
Identities = 127/357 (35%), Positives = 206/357 (57%), Gaps = 23/357 (6%)
Query: 151 GNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKT 210
G +V PI +F L +L N+K + + PTP+Q +P+ GRD++A A TGSGKT
Sbjct: 195 GQEVTRPIIDFEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKT 254
Query: 211 GGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKK-FTYRS 269
FL PV+ + + P+A+IL PTRELA QI +AK+ +
Sbjct: 255 AAFLLPVIMRAL---------------FESKTPSALILTPTRELAIQIERQAKELMSGLP 299
Query: 270 WVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRML 329
+K +++ GG + Q+ +++ +++ATPGRL D++++ + L VK +V+DEAD ML
Sbjct: 300 RMKTVLLVGGLPLPPQLYRLQQHVKVIIATPGRLLDIIKQSSVELCGVKIVVVDEADTML 359
Query: 330 DMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSE 389
MGF+ Q+ I+E ++P ++ QT++ SAT P+ I+ LAS L + V + G
Sbjct: 360 KMGFQQQVLDILE--NIP--NDCQTILVSATIPTSIEQLASQLLHNPVRIITGEKNLPCA 415
Query: 390 NITQKILYVEDFDKNDTLLDLLAASN--EGLTLIFVETKRAADSLTDFL-IMEGFKATAI 446
N+ Q IL+VED K L ++L + L+FV+ K AD L++ + + G K+ +I
Sbjct: 416 NVRQIILWVEDPAKKKKLFEILNDKKLFKPPVLVFVDCKLGADLLSEAVQKITGLKSISI 475
Query: 447 HGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHR 503
H +++Q ER+ L G ++V+T V RGLD+ +V V+NFD+P+ +D+YVH+
Sbjct: 476 HSEKSQIERKNILKGLLEGDYEVVVSTGVLGRGLDLISVRLVVNFDMPSSMDEYVHQ 532
>SPAC823.08c [A] KOG0330 ATP-dependent RNA helicase
Length = 465
Score = 209 bits (533), Expect = 8e-54
Identities = 143/369 (38%), Positives = 201/369 (53%), Gaps = 25/369 (6%)
Query: 148 EASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGS 207
++ N+ P+ E +D L KL F PTP+Q+ ++P+V RD++ AQTGS
Sbjct: 38 DSQNNEAPKTFKELGV--IDELCEACEKLG-FKTPTPIQQEAIPVVLNKRDVIGLAQTGS 94
Query: 208 GKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTY 267
GKT F PV+ E +++ AV+LAPTRELA QI ++ +
Sbjct: 95 GKTAAFALPVIQELWNNPSPFF---------------AVVLAPTRELAYQISEQFEAIGG 139
Query: 268 RSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLER-RYISLANVKYLVLDEAD 326
V+ +V+ GG + Q + ++LV TPGRL D LE + SL N+KYL++DEAD
Sbjct: 140 SIGVRSVVIVGGMDMVTQAVALSKKPHVLVCTPGRLMDHLENTKGFSLKNLKYLIMDEAD 199
Query: 327 RMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGS 386
R+LDM F P I +I++ +P R+TL+FSAT S+++ L L V ++V S
Sbjct: 200 RLLDMDFGPIIDKILK--IIPH--ERRTLLFSATMTSKVEKLQRASLHQPVRVAVSSKFS 255
Query: 387 TSENITQKILYVEDFDKNDTLLDLLAASNEGLTLI-FVETKRAADSLTDFLIMEGFKATA 445
T + + Q+ L+ F DT L L G ++I F T L L GF A
Sbjct: 256 TVDTLIQRYLFFP-FKHKDTYLVYLVNELAGNSIIIFARTVNDTQRLAILLRTLGFSAIP 314
Query: 446 IHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIG 505
+HG +Q R AL+ FK+G + LVAT VAARGLDIP V VIN+D+P D Y+HR+G
Sbjct: 315 LHGQLSQSNRLGALNKFKSGARSTLVATDVAARGLDIPLVDVVINYDIPTDSKAYIHRVG 374
Query: 506 RTGRAGNTG 514
RT RAG G
Sbjct: 375 RTARAGRAG 383
>Hs15316941 [A] KOG0344 ATP-dependent RNA helicase
Length = 491
Score = 209 bits (533), Expect = 8e-54
Identities = 134/411 (32%), Positives = 220/411 (52%), Gaps = 28/411 (6%)
Query: 147 VEASGNDVPEPISEFHSPP----LDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMAC 202
+ G D+P+PI+ F ++ LL NI A F PTP+Q ++P++ GR+L+A
Sbjct: 41 IHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHGRELLAS 100
Query: 203 AQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEA 262
A TGSGKT F P+L + + A + A+I++PTRELA+QI+ E
Sbjct: 101 APTGSGKTLAFSIPILMQ--------LKQPANKGF------RALIISPTRELASQIHREL 146
Query: 263 KKFTYRSWVKPMVVYGGASIDNQI-KQMRYGCNLLVATPGRLTDLLERRY--ISLANVKY 319
K + + + +++ A + + ++LV TP RL LL++ I LA+V++
Sbjct: 147 IKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLASVEW 206
Query: 320 LVLDEADRMLD---MGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDY 376
LV+DE+D++ + GF Q+ I V + MFSATF +++ L +
Sbjct: 207 LVVDESDKLFEDGKTGFRDQLASIFLACTSHKV---RRAMFSATFAYDVEQWCKLNLDNV 263
Query: 377 VFLSVGRVGSTSENITQKILYV-EDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDF 435
+ +S+G S E + Q++L+V + K + +L+ L+FV++ A L
Sbjct: 264 ISVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERAKELFHE 323
Query: 436 LIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPN 495
LI EG IH +RTQ +R+ + +F+ G+ +L+ TA+ ARG+D V VIN+D P
Sbjct: 324 LIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVINYDFPT 383
Query: 496 DIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFL 546
+Y+HRIGRTGRAGN G A TFF +K + + + +++ +A VP ++
Sbjct: 384 SSVEYIHRIGRTGRAGNKGKAITFFTEDDKPLLRSVANVIQQAGCPVPEYI 434
>7299019 [J] KOG0328 Predicted ATP-dependent RNA helicase FAL1 involved in
rRNA maturation DEAD-box superfamily
Length = 399
Score = 209 bits (533), Expect = 8e-54
Identities = 138/398 (34%), Positives = 210/398 (52%), Gaps = 20/398 (5%)
Query: 147 VEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTG 206
VE ++ E I F++ L LL I F KP+ +Q+ S+ + GRD++A AQ+G
Sbjct: 14 VEFETSEDVEVIPTFNAMNLKEELLRGIYAYGFEKPSAIQQRSITPIVKGRDVIAQAQSG 73
Query: 207 SGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFT 266
+GKT F +L +S + T + L+PTRELA QI
Sbjct: 74 TGKTATFSISIL-QSLDTTLRETQ--------------VLCLSPTRELAVQIQKVILALG 118
Query: 267 YRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEAD 326
V+ V GG ++ I+++ YG +++ TPGR+ D+++RR + +K LVLDEAD
Sbjct: 119 DMMNVQCHVCIGGTNLGEDIRKLDYGQHIVSGTPGRVFDMIKRRVLRTRAIKMLVLDEAD 178
Query: 327 RMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGS 386
ML+ GF+ QI + +P Q ++ SAT P EI + S F+ D + + V R
Sbjct: 179 EMLNKGFKEQIYDVYRY--LPPAT--QVVLISATLPHEILEMTSKFMTDPIRILVKRDEL 234
Query: 387 TSENITQKILYVEDFD-KNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATA 445
T E I Q + VE + K DTL DL +IF TKR D LT+ + F ++
Sbjct: 235 TLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSS 294
Query: 446 IHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIG 505
+HGD Q ER+ + F+ G++ +L+ T V ARG+D+ V+ VIN+DLPN+ + Y+HRIG
Sbjct: 295 MHGDMPQKERDEIMKEFRAGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIG 354
Query: 506 RTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVP 543
R+GR G GVA F + + +++ S E+P
Sbjct: 355 RSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMP 392
>CE01341 [J] KOG0327 Translation initiation factor 4F helicase subunit
(eIF-4A) and related helicases
Length = 402
Score = 209 bits (531), Expect = 1e-53
Identities = 130/408 (31%), Positives = 212/408 (51%), Gaps = 23/408 (5%)
Query: 147 VEASG---NDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACA 203
V+A G + + + F L LL I F KP+ +QK ++ G+D++A A
Sbjct: 14 VDADGLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQA 73
Query: 204 QTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAK 263
Q+G+GKT F +L P + A+++APTRELA QI
Sbjct: 74 QSGTGKTATFSVSILQRIDHEDP---------------HVQALVMAPTRELAQQIQKVMS 118
Query: 264 KFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLD 323
V + GG S+ + +++ G +++V TPGR+ D++ R + + +K VLD
Sbjct: 119 ALGEYLNVNILPCIGGTSVRDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLD 178
Query: 324 EADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGR 383
EAD ML GF+ QI + MP + Q ++ SAT PSE+ + + F+++ + + V +
Sbjct: 179 EADEMLSRGFKDQIYEVFRS--MPQ--DVQVVLLSATMPSEVLDVTNRFMRNPIRILVKK 234
Query: 384 VGSTSENITQKILYVE-DFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFK 442
T E I Q + V+ D K D L DL N +IF T+R D+LT+ + F
Sbjct: 235 DELTLEGIRQFYINVQKDEWKFDCLCDLYNVVNVTQAVIFCNTRRKVDTLTEKMTENQFT 294
Query: 443 ATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVH 502
+ +HGD Q ER+ + F++G + +L+ T + ARG+D+ V+ VIN+DLP++ ++Y+H
Sbjct: 295 VSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENYIH 354
Query: 503 RIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFLTTIM 550
RIGR+GR G GVA F + KE+ S + +E+P + ++
Sbjct: 355 RIGRSGRFGRKGVAINFVTENDARQLKEIESYYTTQIEEMPESIADLI 402
>Hs19743937 [A] KOG0338 ATP-dependent RNA helicase
Length = 796
Score = 208 bits (529), Expect = 2e-53
Identities = 132/376 (35%), Positives = 196/376 (52%), Gaps = 20/376 (5%)
Query: 161 FHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSE 220
F L LL I F +PTP+QK +P+ G+D+ ACA TG+GKT F PVL E
Sbjct: 220 FQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVL-E 278
Query: 221 SFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGA 280
P P ++L PTREL Q++ ++ + + GG
Sbjct: 279 RLIYKPRQAPVTR-----------VLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGL 327
Query: 281 SIDNQIKQMRYGCNLLVATPGRLTDLLER-RYISLANVKYLVLDEADRMLDMGFEPQIRR 339
+ +Q +R ++L+ATPGRL D L L++++ L+LDEADRMLD FE Q++
Sbjct: 328 DVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKE 387
Query: 340 IVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVE 399
I+ +RQT++FSAT E++ LAS LK+ V + V + + Q+ + +
Sbjct: 388 IIRMCS----HHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIR 443
Query: 400 ---DFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERE 456
+ D+ + LL + ++F +TK+ A + L + G + +HG+ +Q +R
Sbjct: 444 PNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRL 503
Query: 457 RALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVA 516
AL FK + ILVAT VAARGLDI V VINF +PN I YVHR+GRT RAG G +
Sbjct: 504 EALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRS 563
Query: 517 TTFFNRGNKNVAKELV 532
+ + + KE+V
Sbjct: 564 VSLVGEDERKMLKEIV 579
>Hs7661920 [J] KOG0328 Predicted ATP-dependent RNA helicase FAL1 involved in
rRNA maturation DEAD-box superfamily
Length = 411
Score = 207 bits (527), Expect = 4e-53
Identities = 138/402 (34%), Positives = 209/402 (51%), Gaps = 20/402 (4%)
Query: 143 DDIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMAC 202
D VE ++ + F + L LL I F KP+ +Q+ ++ + GRD++A
Sbjct: 22 DMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQ 81
Query: 203 AQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEA 262
+Q+G+GKT F VL I+ A+ILAPTRELA QI
Sbjct: 82 SQSGTGKTATFSISVLQ---------------CLDIQVRETQALILAPTRELAVQIQKGL 126
Query: 263 KKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVL 322
V+ GG ++ I+++ YG +++ TPGR+ D++ RR + +K LVL
Sbjct: 127 LALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVL 186
Query: 323 DEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVG 382
DEAD ML+ GF+ QI + +P Q ++ SAT P EI + + F+ D + + V
Sbjct: 187 DEADEMLNKGFKEQIYDVYRY--LPPAT--QVVLISATLPHEILEMTNKFMTDPIRILVK 242
Query: 383 RVGSTSENITQKILYVEDFD-KNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGF 441
R T E I Q + VE + K DTL DL +IF TKR D LT+ + F
Sbjct: 243 RDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANF 302
Query: 442 KATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYV 501
+++HGD Q ERE + F++G + +L++T V ARGLD+P V+ +IN+DLPN+ + Y+
Sbjct: 303 TVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYI 362
Query: 502 HRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVP 543
HRIGR+GR G GVA F + + +++ S E+P
Sbjct: 363 HRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMP 404
>SPAC1F5.10 [J] KOG0328 Predicted ATP-dependent RNA helicase FAL1 involved in
rRNA maturation DEAD-box superfamily
Length = 394
Score = 206 bits (524), Expect = 9e-53
Identities = 133/398 (33%), Positives = 208/398 (51%), Gaps = 20/398 (5%)
Query: 147 VEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTG 206
VE + ++ +S F L LL I + P+ VQ ++ + GRD++A AQ+G
Sbjct: 9 VELTTSEDVNAVSSFEEMNLKEDLLRGIYAYGYETPSAVQSRAIIQICKGRDVIAQAQSG 68
Query: 207 SGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFT 266
+GKT F +L +S T A+IL+PTRELA QI +
Sbjct: 69 TGKTATFSIGIL-QSIDLSVRDTQ--------------ALILSPTRELAVQIQNVVLALG 113
Query: 267 YRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEAD 326
V+ GG S+ N IK++ YG +++ TPGR+TD++ RR + NVK L+LDEAD
Sbjct: 114 DHMNVQCHACIGGTSVGNDIKKLDYGQHVVSGTPGRVTDMIRRRNLRTRNVKMLILDEAD 173
Query: 327 RMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGS 386
+L+ GF+ QI I +P Q ++ SAT P ++ + + F + V + V R
Sbjct: 174 ELLNQGFKEQIYDIYRY--LPP--GTQVVVVSATLPQDVLEMTNKFTTNPVRILVKRDEL 229
Query: 387 TSENITQKILYVEDFD-KNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATA 445
T E + Q + VE + K DTL DL +IF ++R D LT+ + F T+
Sbjct: 230 TLEGLKQYFIAVEKEEWKFDTLCDLYDTLTITQAVIFCNSRRKVDWLTEKMREANFTVTS 289
Query: 446 IHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIG 505
+HG+ Q ER+ + F+ G + +L+ T + ARG+D+ V+ VIN+DLP + ++Y+HRIG
Sbjct: 290 MHGEMPQKERDAIMQDFRQGNSRVLICTDIWARGIDVQQVSLVINYDLPANRENYIHRIG 349
Query: 506 RTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVP 543
R+GR G GVA F + + +++ S E+P
Sbjct: 350 RSGRFGRKGVAINFVTNEDVRILRDIEQYYSTVIDEMP 387
>YBR237w [A] KOG0334 RNA helicase
Length = 849
Score = 205 bits (522), Expect = 1e-52
Identities = 137/435 (31%), Positives = 227/435 (51%), Gaps = 48/435 (11%)
Query: 112 PAAKNANLELELFGVAEDKSFQSSGINFDNYDDIPVEASGNDVPEPISEFHSPPL--DPL 169
P KN +E E + + ++ DN ++ G P+P++++ L D +
Sbjct: 213 PFQKNFYIESETVSSMSEMEVEELRLSLDN-----IKIKGTGCPKPVTKWSQLGLSTDTM 267
Query: 170 LLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPAST 229
+L KL F TP+Q ++P + +GRD++ ++TGSGKT +L P+L + + P S
Sbjct: 268 VLITEKL-HFGSLTPIQSQALPAIMSGRDVIGISKTGSGKTISYLLPLLRQVKAQRPLSK 326
Query: 230 PEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSW-VKPMVVYGGASIDNQIKQ 288
E P +ILAPTRELA QI++E KFT ++ + GG+ + QI
Sbjct: 327 HETG---------PMGLILAPTRELALQIHEEVTKFTEADTSIRSVCCTGGSEMKKQITD 377
Query: 289 MRYGCNLLVATPGRLTDLL---ERRYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSD 345
++ G ++VATPGR D+L + + +S + ++V+DEADR+ D+GFEPQI +I++
Sbjct: 378 LKRGTEIVVATPGRFIDILTLNDGKLLSTKRITFVVMDEADRLFDLGFEPQITQIMKTVR 437
Query: 346 MPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQK--ILYVEDFDK 403
++Q ++FSATFP++++ A L + +++ G +EN+ QK I + ED +K
Sbjct: 438 ----PDKQCVLFSATFPNKLRSFAVRVLHSPISITINSKGMVNENVKQKFRICHSED-EK 492
Query: 404 NDTLLDLL----------AASNEGLT----------LIFVETKRAADSLTDFLIMEGFKA 443
D L+ L+ + N+G + +IFV ++ D ++ L+ G
Sbjct: 493 FDNLVQLIHERSEFFDEVQSENDGQSSDVEEVDAKAIIFVSSQNICDFISKKLLNAGIVT 552
Query: 444 TAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHR 503
AIH + ER L FK + +IL+ T V +RGL++P V+ VI ++ YVH
Sbjct: 553 CAIHAGKPYQERLMNLEKFKREKNSILLCTEVLSRGLNVPEVSLVIIYNAVKTFAQYVHT 612
Query: 504 IGRTGRAGNTGVATT 518
GRT R +G A T
Sbjct: 613 TGRTARGSRSGTAIT 627
>At3g19760 [J] KOG0328 Predicted ATP-dependent RNA helicase FAL1 involved in
rRNA maturation DEAD-box superfamily
Length = 408
Score = 205 bits (521), Expect = 2e-52
Identities = 133/402 (33%), Positives = 213/402 (52%), Gaps = 20/402 (4%)
Query: 143 DDIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMAC 202
DD + D EPI+ F+ + +L + F KP+ +Q+ +V + GRD++A
Sbjct: 19 DDDKLVFETTDGIEPITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQ 78
Query: 203 AQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEA 262
AQ+G+GKT V +S ++V A+IL+PTRELATQ
Sbjct: 79 AQSGTGKTSMIALSVCQVVDTSS-------------REVQ--ALILSPTRELATQTEKTI 123
Query: 263 KKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVL 322
+ + ++ GG S+ I+++ +G +++ TPGR+ D+++RR + +K L+L
Sbjct: 124 QAIGLHANIQAHACIGGNSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRSLRTRAIKLLIL 183
Query: 323 DEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVG 382
DE+D ML GF+ QI + +P + Q + SAT P EI + S F+ + V + V
Sbjct: 184 DESDEMLSRGFKDQIYDVYRY--LPP--DLQVCLVSATLPHEILEMTSKFMTEPVKILVK 239
Query: 383 RVGSTSENITQKILYVEDFD-KNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGF 441
R T E I Q + VE + K DTL DL +IF TKR D L++ + F
Sbjct: 240 RDELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDYLSEKMRSHNF 299
Query: 442 KATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYV 501
+++HGD Q ER+ ++ F++G + +L+ T V ARG+D+ V+ VIN+DLPN+ + Y+
Sbjct: 300 TVSSMHGDMPQKERDAIMNEFRSGDSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYI 359
Query: 502 HRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVP 543
HRIGR+GR G GVA F + + +++ S E+P
Sbjct: 360 HRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMP 401
>YDR021w [J] KOG0328 Predicted ATP-dependent RNA helicase FAL1 involved in
rRNA maturation DEAD-box superfamily
Length = 399
Score = 204 bits (520), Expect = 2e-52
Identities = 134/412 (32%), Positives = 221/412 (53%), Gaps = 23/412 (5%)
Query: 137 INFDNYDDIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAG 196
++FD +D ++ + + S F S L LL I F P+ +Q ++ + +G
Sbjct: 1 MSFDREEDQKLKFKTSKKLKVSSTFESMNLKDDLLRGIYSYGFEAPSSIQSRAITQIISG 60
Query: 197 RDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELAT 256
+D++A AQ+G+GKT F +L ++K A+IL+PTRELA+
Sbjct: 61 KDVIAQAQSGTGKTATFTIGLLQAID---------------LRKKDLQALILSPTRELAS 105
Query: 257 QIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQM-RYGCNLLVATPGRLTDLLERRYISLA 315
QI K V + GG ++ + +K+M ++GC + TPGR+ D+++++ +
Sbjct: 106 QIGQVVKNLGDYMNVNAFAITGGKTLKDDLKKMQKHGCQAVSGTPGRVLDMIKKQMLQTR 165
Query: 316 NVKYLVLDEADRMLD--MGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFL 373
NV+ LVLDEAD +L +GF+ QI I + +P N Q ++ SAT +I + F+
Sbjct: 166 NVQMLVLDEADELLSETLGFKQQIYDIF--AKLPK--NCQVVVVSATMNKDILEVTRKFM 221
Query: 374 KDYVFLSVGRVGSTSENITQKILYVEDFD-KNDTLLDLLAASNEGLTLIFVETKRAADSL 432
D V + V R + E I Q ++ V+ + K DTL D+ + +IF TK+ D L
Sbjct: 222 NDPVKILVKRDEISLEGIKQYVVNVDKEEWKFDTLCDIYDSLTITQCVIFCNTKKKVDWL 281
Query: 433 TDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFD 492
+ LI F ++HGD Q ER++ ++ F+TG + +L++T V ARG+D+ V+ VIN+D
Sbjct: 282 SQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLISTDVWARGIDVQQVSLVINYD 341
Query: 493 LPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPS 544
LP I++Y+HRIGR+GR G GVA F + + +E+ S +P+
Sbjct: 342 LPEIIENYIHRIGRSGRFGRKGVAINFITKADLAKLREIEKFYSIKINPMPA 393
>Hs20149629 [A] KOG0330 ATP-dependent RNA helicase
Length = 455
Score = 204 bits (520), Expect = 2e-52
Identities = 138/406 (33%), Positives = 216/406 (52%), Gaps = 24/406 (5%)
Query: 144 DIPVEASGNDVPEPISE-FHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMAC 202
D P EAS V E ++ F + +L + +TKPT +Q ++P+ GRD++
Sbjct: 8 DSPTEASQPIVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGL 67
Query: 203 AQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEA 262
A+TGSGKTG F P+L+ TP+ A++L PTRELA QI ++
Sbjct: 68 AETGSGKTGAFALPILNALLE-----TPQRL----------FALVLTPTRELAFQISEQF 112
Query: 263 KKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLER-RYISLANVKYLV 321
+ V+ V+ GG +Q + ++++ATPGRL D LE + +L +KYLV
Sbjct: 113 EALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLV 172
Query: 322 LDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSV 381
+DEADR+L+M FE ++ +I++ +R+T +FSAT ++Q L LK+ V +V
Sbjct: 173 MDEADRILNMDFETEVDKILKVIPR----DRKTFLFSATMTKKVQKLQRAALKNPVKCAV 228
Query: 382 GRVGSTSENITQKILYVEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGF 441
T E + Q +++ K+ L+ +L +IF T L GF
Sbjct: 229 SSKYQTVEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGF 288
Query: 442 KATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYV 501
A +HG +Q +R +L+ FK +IL+AT VA+RGLDIP+V V+NFD+P DY+
Sbjct: 289 TAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYI 348
Query: 502 HRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFLT 547
HR+GRT RAG +G A TF + + + + + L+ +++P F T
Sbjct: 349 HRVGRTARAGRSGKAITFVTQYDVELFQRIEHLI---GKKLPGFPT 391
>7304081 [A] KOG0338 ATP-dependent RNA helicase
Length = 782
Score = 204 bits (518), Expect = 4e-52
Identities = 121/381 (31%), Positives = 201/381 (51%), Gaps = 19/381 (4%)
Query: 156 EPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLF 215
E I+ F+ L L+ I + + PTP+Q ++P+ GRD+ CA TG+GKT ++
Sbjct: 154 EQITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDICGCAATGTGKTAAYML 213
Query: 216 PVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMV 275
P L N I +V ++L PTREL Q+Y K+ + + +
Sbjct: 214 PTLERLLY-------RPLNNKAITRV----LVLVPTRELGAQVYQVTKQLCQFTTIDVGL 262
Query: 276 VYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERR-YISLANVKYLVLDEADRMLDMGFE 334
GG + Q +R ++++ATPGRL D ++ +L +++ L+LDEADRMLD F
Sbjct: 263 AIGGLDVKAQEAVLRQNPDIVIATPGRLIDHIKNTPSFTLDSIEVLILDEADRMLDEYFA 322
Query: 335 PQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQK 394
Q++ I+ RQT++FSAT +++ LA+ L + + V + N+ Q+
Sbjct: 323 EQMKEIINSC----CKTRQTMLFSATMSEQVKDLAAVSLDKPIKVFVNNNQQVAFNLRQE 378
Query: 395 ILYV---EDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRT 451
+ + ++ D+ L L+ + ++FV+TK+ A L L + G +A +HG+ T
Sbjct: 379 FIRIREDKEGDREPILASLICRTFHDHCMVFVQTKKQAHRLHILLGLLGVRAGELHGNLT 438
Query: 452 QGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAG 511
Q +R +L FK + +L+AT VAARGLDI V VINF +P + Y+HR+GRT RAG
Sbjct: 439 QQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGRTARAG 498
Query: 512 NTGVATTFFNRGNKNVAKELV 532
G++ + + + K+++
Sbjct: 499 RAGISVSLAGEKERKIVKDII 519
>7293941 [A] KOG0344 ATP-dependent RNA helicase
Length = 594
Score = 204 bits (518), Expect = 4e-52
Identities = 134/425 (31%), Positives = 221/425 (51%), Gaps = 38/425 (8%)
Query: 147 VEASGNDVPEPISEFHSPPLD----PLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMAC 202
+ G +VP P+ F + D P L N+ F PTP+Q ++P++ R LMAC
Sbjct: 103 IRVLGKNVPPPVDSFGTLTRDFKMLPRLQQNLLSRNFDHPTPIQMQALPVLLQRRALMAC 162
Query: 203 AQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEA 262
A TGSGKT FL P+++ G K A++LAPTRELA QIY E
Sbjct: 163 APTGSGKTLAFLTPIIN--------------GLRAHKTTGLRALVLAPTRELAQQIYREC 208
Query: 263 KKFTYRSWVKPMVVYGGASIDNQIKQMRYGC------NLLVATPGRLTDLLERR--YISL 314
+ T + ++ + S ++ KQ ++G ++LV+TP R+ LL++ + L
Sbjct: 209 AELTRETGLRTHFI----SKVSEAKQ-KHGAECKQRYDILVSTPNRVRFLLQQEPPLLDL 263
Query: 315 ANVKYLVLDEADRMLDMG---FEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASD 371
++V++ VLDEADR+++ G F+ Q+ I P+ + FSAT+ + A
Sbjct: 264 SHVEWFVLDEADRLMEEGQNNFKEQLDDIYAACSNPT---KCVAFFSATYTVPVAKWALR 320
Query: 372 FLKDYVFLSVGRVGSTSENITQKILYV-EDFDKNDTLLDLLAASNEGLTLIFVETKRAAD 430
LK+ V +++G S +E + Q++L+V + K + DL+ + L+FV++K A
Sbjct: 321 HLKNLVRITIGVQNSATETVQQELLFVGSEGGKLVAIRDLVRQGLQPPVLVFVQSKERAK 380
Query: 431 SLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVIN 490
L + L+ +G IH +R+Q +R+ + AF+ G +L+ T + RG+D V VIN
Sbjct: 381 QLFEELLYDGINVDVIHAERSQHQRDNCVKAFREGSIWVLICTELMGRGIDFKGVNLVIN 440
Query: 491 FDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFLTTIM 550
+D P Y+HRIGRTGRAG G A TFF + + + + + ++ + VP ++ +
Sbjct: 441 YDFPPTTISYIHRIGRTGRAGRPGRAITFFTQEDTSNLRGIALIIKNSGGTVPEYMLQMK 500
Query: 551 REASS 555
+ S
Sbjct: 501 KVRKS 505
>Hs4503529 [J] KOG0327 Translation initiation factor 4F helicase subunit
(eIF-4A) and related helicases
Length = 406
Score = 203 bits (517), Expect = 6e-52
Identities = 128/399 (32%), Positives = 210/399 (52%), Gaps = 24/399 (6%)
Query: 147 VEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTG 206
+E++ N++ + F L LL I F KP+ +Q+ ++ G D++A AQ+G
Sbjct: 23 IESNWNEI---VDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSG 79
Query: 207 SGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFT 266
+GKT F +L + A+ A++LAPTRELA QI
Sbjct: 80 TGKTATFAISILQQIELDLKATQ---------------ALVLAPTRELAQQIQKVVMALG 124
Query: 267 YRSWVKPMVVYGGASIDNQIKQMRYGC-NLLVATPGRLTDLLERRYISLANVKYLVLDEA 325
GG ++ ++++++ +++V TPGR+ D+L RRY+S +K VLDEA
Sbjct: 125 DYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEA 184
Query: 326 DRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVG 385
D ML GF+ QI I + + N Q ++ SAT PS++ + F++D + + V +
Sbjct: 185 DEMLSRGFKDQIYDIFQKLN----SNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEE 240
Query: 386 STSENITQKILYVEDFD-KNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKAT 444
T E I Q + VE + K DTL DL +IF+ T+R D LT+ + F +
Sbjct: 241 LTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVS 300
Query: 445 AIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRI 504
A+HGD Q ER+ + F++G + +L+ T + ARG+D+ V+ VIN+DLP + ++Y+HRI
Sbjct: 301 AMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRI 360
Query: 505 GRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVP 543
GR GR G GVA +K +++ + + + +E+P
Sbjct: 361 GRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMP 399
>7297048 [J] KOG0327 Translation initiation factor 4F helicase subunit
(eIF-4A) and related helicases
Length = 389
Score = 203 bits (516), Expect = 7e-52
Identities = 129/396 (32%), Positives = 210/396 (52%), Gaps = 20/396 (5%)
Query: 156 EPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLF 215
E F L LL I F KP+ +Q+ ++ GRD++A AQ+G+GKT F
Sbjct: 13 EVYDNFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDVIAQAQSGTGKTATFSI 72
Query: 216 PVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMV 275
+L + +S I++ A+ILAPTRELATQI V
Sbjct: 73 AILQQIDTS-------------IRECQ--ALILAPTRELATQIQRVVMALGEYMKVHSHA 117
Query: 276 VYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEP 335
GG ++ + + GC+++V TPGR+ D++ R+ + +K VLDEAD ML GF+
Sbjct: 118 CIGGTNVREDARILESGCHVVVGTPGRVYDMINRKVLRTQYIKLFVLDEADEMLSRGFKD 177
Query: 336 QIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKI 395
QI+ + + P V Q ++ SAT P ++ ++ F++D V + V + T E I Q
Sbjct: 178 QIQDVFKMLP-PDV---QVILLSATMPPDVLEVSRCFMRDPVSILVKKEELTLEGIKQFY 233
Query: 396 LYVEDFD-KNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGE 454
+ V+ + K TL DL + ++IF T+R D LT + + F +A+HGD Q +
Sbjct: 234 VNVKQENWKLGTLCDLYDTLSITQSVIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRD 293
Query: 455 RERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTG 514
RE + F++G + +L+ T + ARG+D+ V+ VIN+DLP++ ++Y+HRIGR GR G G
Sbjct: 294 REVIMKQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKG 353
Query: 515 VATTFFNRGNKNVAKELVSLLSEANQEVPSFLTTIM 550
VA F ++ + K++ +E+P+ + ++
Sbjct: 354 VAINFITDDDRRILKDIEQFYHTTIEEMPANIADLI 389
>Hs13787209 [A] KOG0331 ATP-dependent RNA helicase
Length = 715
Score = 201 bits (512), Expect = 2e-51
Identities = 143/429 (33%), Positives = 217/429 (50%), Gaps = 35/429 (8%)
Query: 112 PAAKNANLELELFGVAEDKSFQ-SSGINFDNYDDIPVEASGNDVPEPISE---------- 160
P K E E+ G +KS + +G D P EA+ + I +
Sbjct: 60 PKPKKMKKEKEMNGETREKSPKLKNGFPHPEPDCNPSEAASEESNSEIEQEIPVEQKEGA 119
Query: 161 FHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSE 220
F + P+ + +K T P+Q + V +G+DL+A A+TG+GKT F P++ +
Sbjct: 120 FSNFPISEETIKLLKGRGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEK 179
Query: 221 SFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGA 280
A P ++LAPTRELA Q+ + T + V YGG
Sbjct: 180 LHGELQDRKRGRA---------PQVLVLAPTRELANQVSKDFSDITKKLSVA--CFYGGT 228
Query: 281 SIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRI 340
Q ++MR G ++LV TPGR+ D ++ + L +K++VLDE D+MLDMGF Q+ I
Sbjct: 229 PYGGQFERMRNGIDILVGTPGRIKDHIQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEI 288
Query: 341 VEGS-DMPSVDNRQTLMFSATFPSEIQHLASDFLK------DYVFLSVGRVGSTSENITQ 393
+ + S DN QTL+FSAT P + ++A ++K D + + T E++
Sbjct: 289 LSVAYKKDSEDNPQTLLFSATCPHWVFNVAKKYMKSTYEQVDLIGKKTQKTAITVEHLAI 348
Query: 394 KILYVEDFDKNDTLLDLLA--ASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRT 451
K + + + + D++ + ++G T+IF ETK+ A L+ ++ A ++HGD
Sbjct: 349 KCHWTQ---RAAVIGDVIRVYSGHQGRTIIFCETKKEAQELSQNSAIKQ-DAQSLHGDIP 404
Query: 452 QGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAG 511
Q +RE L F+ G +LVAT VAARGLDIP V VI P D++ Y+HR GRTGRAG
Sbjct: 405 QKQREITLKGFRNGSFGVLVATNVAARGLDIPEVDLVIQSSPPKDVESYIHRSGRTGRAG 464
Query: 512 NTGVATTFF 520
TGV F+
Sbjct: 465 RTGVCICFY 473
>SPAC1006.07 [J] KOG0327 Translation initiation factor 4F helicase subunit
(eIF-4A) and related helicases
Length = 392
Score = 201 bits (510), Expect = 4e-51
Identities = 133/405 (32%), Positives = 214/405 (52%), Gaps = 23/405 (5%)
Query: 140 DNYDDIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDL 199
D +D +E + ++V I F L P LL I F +P+ +Q+ ++ + RD+
Sbjct: 3 DQLEDSVIETNYDEV---IDTFDDMNLKPELLRGIYAYGFERPSAIQQRAIMPILGERDV 59
Query: 200 MACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIY 259
+A AQ+G+GKT F VL + +S +K+ A+ILAPTRELA QI
Sbjct: 60 LAQAQSGTGKTATFSISVLQKIDTS-------------LKQCQ--ALILAPTRELAQQIQ 104
Query: 260 DEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKY 319
V+ GG + + + ++ G +++V TPGR+ D+++RR + V+
Sbjct: 105 KVVVALGDLMNVECHACIGGTLVRDDMAALQAGVHVVVGTPGRVHDMIQRRALPTDAVQM 164
Query: 320 LVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFL 379
VLDEAD ML GF+ QI I + +P Q ++ SAT P ++ + + F++D + +
Sbjct: 165 FVLDEADEMLSRGFKDQIYDIFQL--LPPT--AQVVLLSATMPQDVLEVTTKFMRDPIRI 220
Query: 380 SVGRVGSTSENITQKILYVEDFD-KNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIM 438
V + T E I Q + VE + K DTL DL +IF T+R D LT+ L
Sbjct: 221 LVKKDELTLEGIKQFYVAVEKEEWKLDTLCDLYETVTVTQAVIFCNTRRKVDWLTEQLTE 280
Query: 439 EGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDID 498
F +++HGD Q +R+ + F+TG + IL+ T + ARG+D+ V+ VIN+DLP + +
Sbjct: 281 RDFTVSSMHGDMDQAQRDTLMHEFRTGSSRILITTDLLARGIDVQQVSLVINYDLPANRE 340
Query: 499 DYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVP 543
+Y+HRIGR GR G GV+ F + + +E+ + +E+P
Sbjct: 341 NYIHRIGRGGRFGRKGVSINFVTNDDVRMMREIEQFYNTHIEEMP 385
>Hs13129006 [A] KOG0331 ATP-dependent RNA helicase
Length = 737
Score = 201 bits (510), Expect = 4e-51
Identities = 133/365 (36%), Positives = 197/365 (53%), Gaps = 27/365 (7%)
Query: 168 PLLLDNIKLARFTKPT---PVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSS 224
P+ + IKL + T P+Q + V G+DL+A A+TG+GKT F P++
Sbjct: 143 PISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERL--- 199
Query: 225 GPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDN 284
+ + K P ++LAPTRELA Q+ + K T + V YGG S +
Sbjct: 200 ------QRNQETIKKSRSPKVLVLAPTRELANQVAKDFKDITRKLSVA--CFYGGTSYQS 251
Query: 285 QIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRIV-EG 343
QI +R G ++LV TPGR+ D L+ + L+ ++++VLDE D+MLD+GF Q+ I+ E
Sbjct: 252 QINHIRNGIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIHES 311
Query: 344 SDMPSVDNRQTLMFSATFPSEIQHLASDFLK------DYVFLSVGRVGSTSENITQKILY 397
S DN QTL+FSAT P + +A ++K D V + +T E++ + +
Sbjct: 312 YKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCHW 371
Query: 398 VEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATA--IHGDRTQGER 455
+ +L + + S EG +IF ETK+ ++T+ + K A +HGD Q +R
Sbjct: 372 SQRPAVIGDVLQVYSGS-EGRAIIFCETKK---NVTEMAMNPHIKQNAQCLHGDIAQSQR 427
Query: 456 ERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGV 515
E L F+ G +LVAT VAARGLDIP V VI P D++ Y+HR GRTGRAG TG+
Sbjct: 428 EITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTGRAGRTGI 487
Query: 516 ATTFF 520
F+
Sbjct: 488 CICFY 492
>Hs4503531 [J] KOG0327 Translation initiation factor 4F helicase subunit
(eIF-4A) and related helicases
Length = 407
Score = 200 bits (509), Expect = 5e-51
Identities = 128/399 (32%), Positives = 211/399 (52%), Gaps = 24/399 (6%)
Query: 147 VEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTG 206
+E++ N++ + F L LL I F KP+ +Q+ ++ G D++A AQ+G
Sbjct: 24 IESNWNEI---VDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSG 80
Query: 207 SGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFT 266
+GKT F +L + I+ A++LAPTRELA QI
Sbjct: 81 TGKTATFAISILQQL---------------EIEFKETQALVLAPTRELAQQIQKVILALG 125
Query: 267 YRSWVKPMVVYGGASIDNQIKQMRYGC-NLLVATPGRLTDLLERRYISLANVKYLVLDEA 325
GG ++ N++++++ +++V TPGR+ D+L RRY+S +K VLDEA
Sbjct: 126 DYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEA 185
Query: 326 DRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVG 385
D ML GF+ QI I + + + Q + SAT P+++ + F++D + + V +
Sbjct: 186 DEMLSRGFKDQIYEIFQKLNT----SIQVVFASATMPTDVLEVTKKFMRDPIRILVKKEE 241
Query: 386 STSENITQKILYVEDFD-KNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKAT 444
T E I Q + VE + K DTL DL +IF+ T+R D LT+ + F +
Sbjct: 242 LTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVS 301
Query: 445 AIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRI 504
A+HGD Q ER+ + F++G + +L+ T + ARG+D+ V+ VIN+DLP + ++Y+HRI
Sbjct: 302 ALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRI 361
Query: 505 GRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVP 543
GR GR G GVA F +K + +++ + + +E+P
Sbjct: 362 GRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMP 400
>At1g77050 [A] KOG0337 ATP-dependent RNA helicase
Length = 513
Score = 200 bits (509), Expect = 5e-51
Identities = 127/387 (32%), Positives = 210/387 (53%), Gaps = 20/387 (5%)
Query: 161 FHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSE 220
F S L P + + IK + PTP+Q+ ++P++ +G D++A A+TGSGKT FL P+L +
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89
Query: 221 SFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGA 280
++ + A+IL+PTR+LA Q K+ + ++ ++ GG
Sbjct: 90 L-------------KQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGD 136
Query: 281 SIDNQIKQMRYGCNLLVATPGRLTDLL-ERRYISLANVKYLVLDEADRMLDMGFEPQIRR 339
S+++Q +++ G ++++ATPGRL LL E ++L V+Y+V DEAD + MGF Q+ +
Sbjct: 137 SMEDQFEELTKGPDVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQ 196
Query: 340 IVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVE 399
I+ +NRQTL+FSAT PS + A L++ + + S ++ L V
Sbjct: 197 ILTQLS----ENRQTLLFSATLPSALAEFAKAGLREPQLVRLDVENKISPDLKLSFLTVR 252
Query: 400 DFDKNDTLLDLLAA--SNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERER 457
+K LL L+ S++ TLIFV TK + + +E + + +GD Q R+
Sbjct: 253 PEEKYSALLYLVREHISSDQQTLIFVSTKHHVEFVNSLFKLENIEPSVCYGDMDQDARKI 312
Query: 458 ALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVAT 517
+S F+ + +L+ T +AARG+DIP + +VIN+D P +VHR+GR RAG TG A
Sbjct: 313 HVSRFRARKTMLLIVTDIAARGIDIPLLDNVINWDFPPRPKIFVHRVGRAARAGRTGCAY 372
Query: 518 TFFNRGNKNVAKELVSLLSEANQEVPS 544
+F + +L LS+ + P+
Sbjct: 373 SFVTPEDMPYMLDLHLFLSKPVRPAPT 399
>YKR059w [J] KOG0327 Translation initiation factor 4F helicase subunit
(eIF-4A) and related helicases
Length = 395
Score = 199 bits (506), Expect = 1e-50
Identities = 129/394 (32%), Positives = 208/394 (52%), Gaps = 21/394 (5%)
Query: 158 ISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPV 217
+ +F LD LL + F +P+ +Q+ ++ + G D++A AQ+G+GKTG F
Sbjct: 21 VYKFDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAA 80
Query: 218 LSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVY 277
L +S A P A++LAPTRELA QI + +K
Sbjct: 81 LQRIDTSVKA---------------PQALMLAPTRELALQIQKVVMALAFHMDIKVHACI 125
Query: 278 GGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQI 337
GG S + +R ++V TPGR+ D ++RR +K +LDEAD ML GF+ QI
Sbjct: 126 GGTSFVEDAEGLR-DAQIVVGTPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQI 184
Query: 338 RRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILY 397
+I + +P Q ++ SAT P+++ + + F+++ V + V + T E I Q +
Sbjct: 185 YQIF--TLLPPTT--QVVLLSATMPNDVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVN 240
Query: 398 VEDFD-KNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERE 456
VE+ + K + L DL + + +IF T+R + LT L + F +AI+ D Q ER+
Sbjct: 241 VEEEEYKYECLTDLYDSISVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERD 300
Query: 457 RALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVA 516
+ F++G + IL++T + ARG+D+ V+ VIN+DLP + ++Y+HRIGR GR G GVA
Sbjct: 301 TIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVA 360
Query: 517 TTFFNRGNKNVAKELVSLLSEANQEVPSFLTTIM 550
F + +EL S +E+PS + T++
Sbjct: 361 INFVTNEDVGAMRELEKFYSTQIEELPSDIATLL 394
>YJL138c [J] KOG0327 Translation initiation factor 4F helicase subunit
(eIF-4A) and related helicases
Length = 395
Score = 199 bits (506), Expect = 1e-50
Identities = 129/394 (32%), Positives = 208/394 (52%), Gaps = 21/394 (5%)
Query: 158 ISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPV 217
+ +F LD LL + F +P+ +Q+ ++ + G D++A AQ+G+GKTG F
Sbjct: 21 VYKFDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAA 80
Query: 218 LSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVY 277
L +S A P A++LAPTRELA QI + +K
Sbjct: 81 LQRIDTSVKA---------------PQALMLAPTRELALQIQKVVMALAFHMDIKVHACI 125
Query: 278 GGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQI 337
GG S + +R ++V TPGR+ D ++RR +K +LDEAD ML GF+ QI
Sbjct: 126 GGTSFVEDAEGLR-DAQIVVGTPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQI 184
Query: 338 RRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILY 397
+I + +P Q ++ SAT P+++ + + F+++ V + V + T E I Q +
Sbjct: 185 YQIF--TLLPPTT--QVVLLSATMPNDVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVN 240
Query: 398 VEDFD-KNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERE 456
VE+ + K + L DL + + +IF T+R + LT L + F +AI+ D Q ER+
Sbjct: 241 VEEEEYKYECLTDLYDSISVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERD 300
Query: 457 RALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVA 516
+ F++G + IL++T + ARG+D+ V+ VIN+DLP + ++Y+HRIGR GR G GVA
Sbjct: 301 TIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVA 360
Query: 517 TTFFNRGNKNVAKELVSLLSEANQEVPSFLTTIM 550
F + +EL S +E+PS + T++
Sbjct: 361 INFVTNEDVGAMRELEKFYSTQIEELPSDIATLL 394
>At5g08610 [A] KOG0342 ATP-dependent RNA helicase pitchoune
Length = 827
Score = 198 bits (504), Expect = 2e-50
Identities = 135/369 (36%), Positives = 195/369 (52%), Gaps = 25/369 (6%)
Query: 159 SEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVL 218
+ F PL PL L IK A F T VQ+ ++PI+ G+D++A A+TG+GKT FL P +
Sbjct: 359 TRFDQFPLSPLSLKAIKDAGFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAI 418
Query: 219 SESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFT-YRSWVKPMVVY 277
S PAS + +++ PTRELA+Q EA Y + VV
Sbjct: 419 EAVIKSPPASRDSRQPPIIV-------LVVCPTRELASQAAAEANTLLKYHPSIGVQVVI 471
Query: 278 GGASIDNQIKQMRYG-CNLLVATPGRLTDLLERRY---ISLANVKYLVLDEADRMLDMGF 333
GG + + ++M+ C +LVATPGRL D +E L VK LVLDEAD +LDMGF
Sbjct: 472 GGTKLPTEQRRMQTNPCQILVATPGRLKDHIENTSGFATRLMGVKVLVLDEADHLLDMGF 531
Query: 334 EPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLK-DYVFLSVGRVGS--TSEN 390
I RI+ +P RQT +FSAT P E++ + LK D+ F++ + GS T +
Sbjct: 532 RRDIERIIAA--VPK--QRQTFLFSATVPEEVRQICHVALKRDHEFINCVQEGSGETHQK 587
Query: 391 ITQKILYVEDFDKNDTLLDLL-----AASNEGLTLIFVETKRAADSLTDFLIMEGFKATA 445
+TQ + + D++ +LL +L A + + +IF T + D L
Sbjct: 588 VTQMYM-IASLDRHFSLLHVLLKEHIADNVDYKVIIFCTTAMVTRLVADLLSQLSLNVRE 646
Query: 446 IHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIG 505
IH + Q R R F+ +A ILV + V+ARG+D P+V+ V+ LP+D + Y+HR+G
Sbjct: 647 IHSRKPQSYRTRVSDEFRKSKAIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLG 706
Query: 506 RTGRAGNTG 514
RTGR G G
Sbjct: 707 RTGRKGKEG 715
>At5g60990 [A] KOG0330 ATP-dependent RNA helicase
Length = 454
Score = 197 bits (501), Expect = 4e-50
Identities = 130/366 (35%), Positives = 198/366 (53%), Gaps = 14/366 (3%)
Query: 182 PTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKV 241
P+ +Q ++P G+D++ AQTGSGKTG F P+L S P+ ++
Sbjct: 32 PSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQALLEYVYDSEPKKG-----RRP 86
Query: 242 YPT--AVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVAT 299
P A +L+PTRELA QI ++ + ++ V+ GG ID + + G VAT
Sbjct: 87 DPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGG--IDRMQQTIALGKRPHVAT 144
Query: 300 PGRLTD-LLERRYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFS 358
PGRL D + + + SL ++KYLVLDEADR+L+ FE + +I+E + R+T +FS
Sbjct: 145 PGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQILEEIPL----ERKTFLFS 200
Query: 359 ATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNEGL 418
AT +++ L L++ V + ST + + Q+ +V K+ L+ +L+ E
Sbjct: 201 ATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYRFVAAKYKDCYLVYILSEMPEST 260
Query: 419 TLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAAR 478
++IF T L L GF+A I G TQ +R AL+ FK G ILV T VA+R
Sbjct: 261 SMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNKFKAGECNILVCTDVASR 320
Query: 479 GLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEA 538
GLDIP+V VIN+D+P + DY+HR+GRT RAG +GV + N+ ++ L+ +
Sbjct: 321 GLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLVNQYELEWYIQIEKLIGKK 380
Query: 539 NQEVPS 544
E P+
Sbjct: 381 LPEYPA 386
>CE27030 [A] KOG0338 ATP-dependent RNA helicase
Length = 763
Score = 197 bits (500), Expect = 5e-50
Identities = 131/437 (29%), Positives = 210/437 (47%), Gaps = 45/437 (10%)
Query: 126 VAEDKSFQSSGINFDNYDDIPVEASGNDVPEPIS-EFHSPPLDPLLLDNIKLARFTKPTP 184
V E + S + +N D G + ++ F L +L A ++ PTP
Sbjct: 114 VREKRKSGKSKKSQENEDFFSALIDGKSLDTSVNVSFEQMNLSRQILKACSGAGYSDPTP 173
Query: 185 VQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPT 244
+Q+ +P+ G+D+ ACA TG+GKT F+ P+L P+ A + +
Sbjct: 174 IQQACIPVALTGKDICACAATGTGKTAAFVLPILERMIYR-----PKGASCTRV------ 222
Query: 245 AVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLT 304
++L PTRELA Q++ +K + ++ + GG + Q +R G +++VATPGRL
Sbjct: 223 -LVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQEAALRSGPDVVVATPGRLI 281
Query: 305 DLLE-------------------------RRYISLANVKYLVLDEADRMLDMGFEPQIRR 339
D L R+ + N + LVLDEADRML+ F Q+
Sbjct: 282 DHLHNSPSFNLSNIEVFFKTPNIPPKKNSRKICKIPNFQVLVLDEADRMLEEAFRDQMNE 341
Query: 340 IVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVE 399
++ NRQTL+FSAT EI LAS L+ V + + T+ + Q+ + +
Sbjct: 342 LIR----LCAQNRQTLLFSATMTEEIDELASMSLQKPVKIFINENTDTALKLRQEFIRIR 397
Query: 400 ---DFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERE 456
+ D+ + L+ + + T++FV TK+ + L + G K + TQG+R
Sbjct: 398 AGRETDREAMVAALVTRTFQTNTIVFVRTKKDCQRMQILLGLLGIKVGQMQSSLTQGQRI 457
Query: 457 RALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVA 516
+LS FK +LV+T +A+RGLDI V VIN ++P I Y+HR+GRT RAG G +
Sbjct: 458 ESLSKFKKAEIDVLVSTDLASRGLDIEGVQTVINMNMPKSIKQYIHRVGRTARAGKAGRS 517
Query: 517 TTFFNRGNKNVAKELVS 533
+ + + KE+V+
Sbjct: 518 ISLVGEDERKLLKEIVN 534
>At5g62190 [A] KOG0331 ATP-dependent RNA helicase
Length = 671
Score = 197 bits (500), Expect = 5e-50
Identities = 134/383 (34%), Positives = 209/383 (53%), Gaps = 22/383 (5%)
Query: 153 DVPEPISEFH-SPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTG 211
D P +S+F S PL L N A F P+Q + +V G DL+ A+TG GKT
Sbjct: 93 DNPNAVSKFRISAPLREKLKANGIEALF----PIQASTFDMVLDGADLVGRARTGQGKTL 148
Query: 212 GFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWV 271
F+ P+L ES +GPA + G P+ ++L PTRELA Q+ + + +
Sbjct: 149 AFVLPIL-ESLVNGPAKSKRKMGYGRS----PSVLVLLPTRELAKQVAADFDAYGGSLGL 203
Query: 272 KPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDM 331
+YGG S Q +++ G +++V TPGR+ D +ER+ + + +++ VLDEAD ML M
Sbjct: 204 SSCCLYGGDSYPVQEGKLKRGVDIVVGTPGRIKDHIERQNLDFSYLQFRVLDEADEMLRM 263
Query: 332 GFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENI 391
GF + I+ + QTL+FSAT PS ++++++ FLK ++ VG+
Sbjct: 264 GFVEDVELIL--GKVEDSTKVQTLLFSATLPSWVKNISNRFLKRDQ-KTIDLVGNDKMKA 320
Query: 392 TQKILYVEDFDKNDTLLDLL-----AASNEGLTLIFVETKRAADSLTDFLIMEGFKATAI 446
+ + ++ + L+ S+ G T+IF ETK L+ L +G +A +
Sbjct: 321 SNSVRHIAIPCNKAAMARLIPDIISCYSSGGQTIIFAETKVQVSELSGLL--DGSRA--L 376
Query: 447 HGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGR 506
HG+ Q +RE L+ F+ G+ LVAT VAARGLDI +V +I + P +++ Y+HR GR
Sbjct: 377 HGEIPQSQREVTLAGFRNGKFATLVATNVAARGLDINDVQLIIQCEPPREVEAYIHRSGR 436
Query: 507 TGRAGNTGVATTFFNRGNKNVAK 529
TGRAGNTGVA T ++ +V++
Sbjct: 437 TGRAGNTGVAVTLYDSRKSSVSR 459
>At1g72730 [J] KOG0327 Translation initiation factor 4F helicase subunit
(eIF-4A) and related helicases
Length = 414
Score = 194 bits (494), Expect = 3e-49
Identities = 134/396 (33%), Positives = 200/396 (49%), Gaps = 20/396 (5%)
Query: 156 EPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLF 215
E F + L P LL I F KP+ +Q+ + G D++ AQ+G+GKT F
Sbjct: 38 EVCDSFDAMELQPDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCS 97
Query: 216 PVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMV 275
VL + I V A++LAPTRELA QI + VK
Sbjct: 98 GVLQQLD---------------ISLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKAQA 142
Query: 276 VYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEP 335
GG S+ + ++ G +++V TPGR+ DLL R+ + +K VLDEAD ML GF+
Sbjct: 143 CVGGTSVREDQRVLQSGVHVVVGTPGRVFDLLRRQSLRADAIKMFVLDEADEMLSRGFKD 202
Query: 336 QIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKI 395
QI I + +PS Q +FSAT P E + F+ V + V R T E I Q
Sbjct: 203 QIYDIFQL--LPS--KVQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFY 258
Query: 396 LYVEDFD-KNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGE 454
+ V+ + K +TL DL ++IFV T+R D LTD + +A HGD Q
Sbjct: 259 VNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNT 318
Query: 455 RERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTG 514
R+ + F++G + +L+ T + ARG+D+ V+ VINFDLP ++Y+HRIGR+GR G G
Sbjct: 319 RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKG 378
Query: 515 VATTFFNRGNKNVAKELVSLLSEANQEVPSFLTTIM 550
VA F ++ + ++ + +E+PS + ++
Sbjct: 379 VAINFMTSEDERMMADIQRFYNVVVEELPSNVADLL 414
>At3g13920 [J] KOG0327 Translation initiation factor 4F helicase subunit
(eIF-4A) and related helicases
Length = 412
Score = 194 bits (493), Expect = 3e-49
Identities = 136/413 (32%), Positives = 206/413 (48%), Gaps = 32/413 (7%)
Query: 139 FDNYDDIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRD 198
F +YDD+ F + L LL I F KP+ +Q+ + G D
Sbjct: 31 FTSYDDVH------------ESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD 78
Query: 199 LMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQI 258
++ AQ+G+GKT F VL + S + A++LAPTRELA QI
Sbjct: 79 VIQQAQSGTGKTATFCSGVLQQLDFS---------------LIQCQALVLAPTRELAQQI 123
Query: 259 YDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVK 318
+ VK GG S+ + ++ G +++V TPGR+ D+L+R+ + N+K
Sbjct: 124 EKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIK 183
Query: 319 YLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVF 378
VLDEAD ML GF+ QI I + P + Q +FSAT P E + F+ V
Sbjct: 184 MFVLDEADEMLSRGFKDQIYDIFQLLP-PKI---QVGVFSATMPPEALEITRKFMSKPVR 239
Query: 379 LSVGRVGSTSENITQKILYVEDFD-KNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLI 437
+ V R T E I Q + VE + K +TL DL ++IFV T+R D LTD +
Sbjct: 240 ILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR 299
Query: 438 MEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDI 497
+A HGD Q R+ + F++G + +L+ T + ARG+D+ V+ VINFDLP
Sbjct: 300 SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQP 359
Query: 498 DDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFLTTIM 550
++Y+HRIGR+GR G GVA F R ++ + ++ + +E+PS + ++
Sbjct: 360 ENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVVEELPSNVADLL 412
>7298752 [A] KOG0330 ATP-dependent RNA helicase
Length = 507
Score = 194 bits (493), Expect = 3e-49
Identities = 124/361 (34%), Positives = 196/361 (53%), Gaps = 20/361 (5%)
Query: 178 RFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSY 237
++ P+ +Q+ ++P+ G+D++ A+TGSGKTG F P+L + Y
Sbjct: 80 KWKAPSKIQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALLENP---------QRY 130
Query: 238 IKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLV 297
A++L PTRELA QI ++ + +K VV GG + Q Q+ ++++
Sbjct: 131 F------ALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPHIII 184
Query: 298 ATPGRLTDLLER-RYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLM 356
ATPGRL D LE + +L +KYLV+DEADR+L+M FE ++ +I++ +P R+T +
Sbjct: 185 ATPGRLVDHLENMKGFNLKAIKYLVMDEADRILNMDFEVELDKILKV--LPR--ERRTFL 240
Query: 357 FSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNE 416
FSAT +++ L LKD V + V T E + Q L++ K+ L+ +L
Sbjct: 241 FSATMTKKVKKLQRASLKDPVKVEVSNKYQTVEQLQQSYLFIPVKYKDVYLVHILNELAG 300
Query: 417 GLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVA 476
+IF T L G A +HG +Q +R AL+ FK +IL++T VA
Sbjct: 301 NSFMIFCSTCNNTVKTALMLRALGLAAIPLHGQMSQNKRLAALNKFKAKNRSILISTDVA 360
Query: 477 ARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLS 536
+RGLDIP+V V+NFD+P DY+HR+GRT RAG +G A T ++ + + + + LL
Sbjct: 361 SRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITLVSQYDIELYQRIEHLLG 420
Query: 537 E 537
+
Sbjct: 421 K 421
>CE11402 [A] KOG0334 RNA helicase
Length = 995
Score = 194 bits (492), Expect = 4e-49
Identities = 157/565 (27%), Positives = 258/565 (44%), Gaps = 46/565 (8%)
Query: 18 SGATSGDSRRSYVPPHVRGQQRSGSGNYRGRSDN---FGGNERSFFGNEXXXXXXXXXXX 74
SG SG+ R Y RSG N N FGGN+ FGN
Sbjct: 249 SGNNSGEYRNDYRSQQDSRDHRSGGNNSSSGFKNDGGFGGNDNRGFGNNGGGSFGNPNNS 308
Query: 75 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDGKHVPAAKNANLELELFGVAEDKSFQS 134
VP ++ + EL D+
Sbjct: 309 YRGNSNNIGGFHRSDGSNSEGVNAPVRAPRD----WVPVTRDID---ELVRETADRL--- 358
Query: 135 SGINFDNYDDIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVA 194
+ D D VE + ++ + + L P +L+ +K ++ +Q +P V
Sbjct: 359 --ADCDVGQDRAVEIRNAEKDVRLTSWTNSGLHPTILETLKRIKYNNVRTIQGAMIPQVL 416
Query: 195 AGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTREL 254
G D++ A+T +GKT F P++ + E N + P A+ILAPTREL
Sbjct: 417 DGHDVLGQAETSAGKTAAFGLPIIDKILRMD-----EETRNKARQDDGPLALILAPTREL 471
Query: 255 ATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISL 314
A QI++ + + + + ++ YG + + ++R GC++L+ T GR+ D + +ISL
Sbjct: 472 AAQIHEALRTYCQNTDIIVLLSYGQSDRARSLNEIRNGCDILIGTCGRIMDFTVKSHISL 531
Query: 315 ANVKYLVLDEADRML-DMGFEP--QIRRIVEGSD-MPSVDNRQTLMFSATFPSEIQHLAS 370
++++LV DEADR+L DM +P + I++ + M S RQT+M SATF + + +A+
Sbjct: 532 LHLRFLVFDEADRLLQDMKKDPLGHLGAIIKDAGFMESAATRQTIMTSATFNASVMTVAN 591
Query: 371 DFLK-----DYVFLSVGRVGSTSENITQKILYVEDF-DKNDTLLDLLAASNEGLTL---I 421
+ +K D + V G S+ + + + +KN L ++L + G TL I
Sbjct: 592 ELMKRLPGQDEMIKIVLANGRLSKRVNLEFFECKGLAEKNAKLREILKQNVNGKTLKTII 651
Query: 422 FVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLD 481
FV+ K D+ L G A +HGDR+Q RE+ ++ FK+ R +LV T + +RG+D
Sbjct: 652 FVQKKDQCDACAAKLTSGGMLAQTLHGDRSQDMREKLINDFKSNRVNLLVTTDLLSRGID 711
Query: 482 IPNVTHVINFDLPN-----DIDDYVHRIGRTGRAG--NTGVATTFFNRGNKN---VAKEL 531
+ ++ VINFDLP+ D ++HR GRTGR G G+ +F + + +A +L
Sbjct: 712 VSDLDRVINFDLPDGDPDQGADTFIHRAGRTGRTGRKENGLCVSFVDPQSDRDSLLAPKL 771
Query: 532 VSLLSEAN---QEVPSFLTTIMREA 553
V L+ N +VP FL + + +
Sbjct: 772 VELIISQNLPDLKVPDFLDAMAKSS 796
>At1g16280 [A] KOG0340 ATP-dependent RNA helicase
Length = 491
Score = 193 bits (490), Expect = 8e-49
Identities = 133/368 (36%), Positives = 197/368 (53%), Gaps = 32/368 (8%)
Query: 181 KPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKK 240
KPTPVQ + VP + AGRD++ AQTGSGKT F P+L A P
Sbjct: 80 KPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILHRL-----AEDPYGV------- 127
Query: 241 VYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATP 300
A+++ PTRELA Q+ ++ K ++ V+ GG + Q + ++++ TP
Sbjct: 128 ---FALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLVSRPHIVITTP 184
Query: 301 GRLTDLLERRYIS---LANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMF 357
GR+ LLE + K+LVLDEADR+LD+GF+ ++R I + +P +RQTL+F
Sbjct: 185 GRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQC--LPK--SRQTLLF 240
Query: 358 SATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAA-SNE 416
SAT S +Q L F T + +TQ+ ++ + K L+ +L+ ++
Sbjct: 241 SATMTSNLQALLEHSSNKAYFYEAYEGLKTVDTLTQQFIFEDKDAKELYLVHILSQMEDK 300
Query: 417 GL--TLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATA 474
G+ +IFV T R L+ L + A+H +Q R ALS FK+G+ IL+AT
Sbjct: 301 GIRSAMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGKVPILLATD 360
Query: 475 VAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSL 534
VA+RGLDIP V VIN+D+P D DYVHR+GRT RAG G+A + + + V L
Sbjct: 361 VASRGLDIPTVDLVINYDIPRDPRDYVHRVGRTARAGRGGLAVSI-------ITETDVKL 413
Query: 535 LSEANQEV 542
+ + +EV
Sbjct: 414 IHKIEEEV 421
>SPAC31A2.07c [A] KOG0337 ATP-dependent RNA helicase
Length = 848
Score = 192 bits (488), Expect = 1e-48
Identities = 123/395 (31%), Positives = 199/395 (50%), Gaps = 54/395 (13%)
Query: 159 SEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVL 218
S F S L+ LL I F PTP+Q+ ++P++ GRD++ A+TGSGKT F+ P++
Sbjct: 69 SNFQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMI 128
Query: 219 SESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYG 278
S+ NS + A+IL+P RELA Q K F+ + ++ + + G
Sbjct: 129 EHLKST--------LANSNTR-----ALILSPNRELALQTVKVVKDFSKGTDLRSVAIVG 175
Query: 279 GASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIR 338
G S++ Q + +++VATPGR L + L++++Y+V DEADR+ +MGF Q+
Sbjct: 176 GVSLEEQFSLLSGKPDIVVATPGRFLHLKVEMKLELSSIEYVVFDEADRLFEMGFAAQLT 235
Query: 339 RIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYV 398
I+ +P+ +RQTL+FSAT P + A L+D V + + S ++ V
Sbjct: 236 EILHA--LPT--SRQTLLFSATLPRTLVDFAKAGLQDPVLVRLDVESKVSADLQSAFFSV 291
Query: 399 EDFDKNDTLLDLL-------------------------------------AASNEGLTLI 421
+ ++ LL +L + + TL+
Sbjct: 292 KTAEREAALLCILQDIIKLPLKDNVRPREIGNVNNPKKRKRALELALKGSESGSPDSTLV 351
Query: 422 FVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLD 481
FV TK + +++ L+ G+ + I+G Q R ++ F+ G+ +LV T VA+RG+D
Sbjct: 352 FVPTKHHVEYVSELLVQAGYSVSKIYGSLDQEARLNEINNFRLGKTNLLVVTDVASRGID 411
Query: 482 IPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVA 516
IP + +VIN+D P +VHR+GRT RAG TG A
Sbjct: 412 IPLLANVINYDFPPQPKVFVHRVGRTARAGRTGWA 446
>At5g63630 [A] KOG0342 ATP-dependent RNA helicase pitchoune
Length = 522
Score = 191 bits (486), Expect = 2e-48
Identities = 137/398 (34%), Positives = 202/398 (50%), Gaps = 25/398 (6%)
Query: 130 KSFQSSGINFDNYDDIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYS 189
K+ + G + +N + + ND + F PL PL L IK A + T VQ+ +
Sbjct: 25 KAVSAFGFDKENVIEADKTRNANDSYLTKTRFDHYPLSPLSLKAIKDAGYETMTVVQEAT 84
Query: 190 VPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILA 249
+PI+ G+D++A A+TG+GKT FL P + S P S K+ A+++
Sbjct: 85 LPIILKGKDVLAKAKTGTGKTVAFLLPSIEVVVKSPPTSPDN-------KRPPILALVIC 137
Query: 250 PTRELATQIYDEAKKFT-YRSWVKPMVVYGGASIDNQIKQMRYG-CNLLVATPGRLTDLL 307
PTRELA Q EA Y + VV GG + + K+M+ C +LVATPGRL D +
Sbjct: 138 PTRELANQAATEANTLLKYHPSIGVQVVIGGTRLGLEQKRMQTNPCQILVATPGRLKDHI 197
Query: 308 ERR---YISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSE 364
E L VK LVLDEAD +LDMGF I RI+ S +P RQT +FSAT P E
Sbjct: 198 ENTPGFATRLKGVKVLVLDEADHLLDMGFRKDIERII--SAVPK--ERQTFLFSATVPEE 253
Query: 365 IQHLASDFLK-DYVFLSVGRVGS--TSENITQKILYVEDFDKNDTLLDLLAASN-----E 416
++ + L+ D+ F++ G+ T + + Q + + D++ +LL L + +
Sbjct: 254 VRQICLVALRRDHEFVNCVHEGTIETHQQVRQMHM-IASLDRHFSLLYTLLREHIMGNVD 312
Query: 417 GLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVA 476
++F T + D L IH + Q R R + F+ + ILV + V+
Sbjct: 313 YKVIVFCTTAMVTKLVADLLGELNLNVREIHSRKPQSYRTRVSNEFRKSKGLILVTSDVS 372
Query: 477 ARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTG 514
ARG+D P+VT V+ LP D + Y+HR+GRTGR G G
Sbjct: 373 ARGVDYPDVTLVLQVGLPKDREQYIHRLGRTGRKGKEG 410
>CE06239 [A] KOG0344 ATP-dependent RNA helicase
Length = 581
Score = 191 bits (485), Expect = 3e-48
Identities = 124/405 (30%), Positives = 207/405 (50%), Gaps = 26/405 (6%)
Query: 151 GNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKT 210
G+ +P I F + P LL+ + +P+P+Q S+P + R+++A A TGSGKT
Sbjct: 118 GDHLPNIILRFSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKT 177
Query: 211 GGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSW 270
F PV+ E + ++ +S + AV+L PTRELA Q Y E K+ +
Sbjct: 178 LAFALPVIDEILELKQRADYSSSNSSKL-----LAVVLEPTRELAAQTYTEFLKYCANTS 232
Query: 271 VKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRML- 329
+ + G D Q ++LV+TP R+ L++ I +++++LV+DE+DR+
Sbjct: 233 ISA-ANFSGEETDIQ------HADILVSTPNRIVFHLDK--IDTSSLRWLVVDESDRLFE 283
Query: 330 -----DMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRV 384
D F Q+ I + D + FSATF E++ + + + + VG
Sbjct: 284 VVEGQDKCFRNQLAAIYKACDAKCT---RVAFFSATFSHEVEKWCKENIDEIGMVCVGER 340
Query: 385 GSTSENITQKILYVEDFD-KNDTLLDLLAASNEGLTLIFVETKRAADSLTDFL--IMEGF 441
S++ ++ QK+ Y D K + +LL S + L+FV++K A L L I
Sbjct: 341 NSSNTSVKQKLTYCGTEDGKKIAIRNLLRTSFKPPALVFVQSKDRAVQLVKLLSAIDSNL 400
Query: 442 KATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYV 501
K +I+ ++ ER+ + F+ G +LV T + RGLD+ +V VIN+DLP I Y+
Sbjct: 401 KVDSINSGKSDKERDETMERFRRGEIWVLVCTELLGRGLDLSDVGLVINYDLPTSIVSYI 460
Query: 502 HRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFL 546
HR+GRTGRAG +G A T+F + K + +++ ++ +VP +L
Sbjct: 461 HRVGRTGRAGKSGHAVTYFTDADMKYIKSIATVIRQSGFDVPEYL 505
>CE00337 [A] KOG0330 ATP-dependent RNA helicase
Length = 489
Score = 189 bits (481), Expect = 8e-48
Identities = 122/350 (34%), Positives = 187/350 (52%), Gaps = 20/350 (5%)
Query: 170 LLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPAST 229
L D + + KP+ +Q+ ++P G+D++ A+TGSGKTG F PVL
Sbjct: 55 LCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDH----- 109
Query: 230 PEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQM 289
P+A ++L PTRELA QI + + + V+ GG + Q +
Sbjct: 110 PQAF----------FCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQAMAL 159
Query: 290 RYGCNLLVATPGRLTDLLER-RYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPS 348
+++VATPGRL D LE + +L +K+L++DEADR+L+M FE ++ +I++
Sbjct: 160 ARRPHIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRILNMDFEVELDKILKVIPR-- 217
Query: 349 VDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLL 408
R+T +FSAT ++ L L+D +SV T +N+ Q ++V + K L+
Sbjct: 218 --ERRTYLFSATMTKKVSKLERASLRDPARVSVSSRYKTVDNLKQHYIFVPNKYKETYLV 275
Query: 409 DLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRAT 468
LL ++F T + L G +A +HG +Q +R +L+ FK+
Sbjct: 276 YLLNEHAGNSAIVFCATCATTMQIAVMLRQLGMQAVPLHGQMSQEKRLGSLNKFKSKARE 335
Query: 469 ILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATT 518
ILV T VAARGLDIP+V VIN+D+P+ DYVHR+GRT RAG +G+A T
Sbjct: 336 ILVCTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRTARAGRSGIAIT 385
>YLL008w [A] KOG0338 ATP-dependent RNA helicase
Length = 752
Score = 189 bits (479), Expect = 1e-47
Identities = 128/388 (32%), Positives = 209/388 (52%), Gaps = 26/388 (6%)
Query: 148 EASGNDVPEPISE-FHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTG 206
E G++ + + E F+S L +L + + KP+P+Q ++PI G+D++A A TG
Sbjct: 219 ETEGDEAKKQMYENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTG 278
Query: 207 SGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVI-LAPTRELATQIYDEAKKF 265
SGKT F+ P++ E PA K+ T VI L PTRELA Q+ D K+
Sbjct: 279 SGKTAAFMIPII-ERLLYKPA------------KIASTRVIVLLPTRELAIQVADVGKQI 325
Query: 266 T-YRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRY-ISLANVKYLVLD 323
+ S + + GG ++ Q + ++ ++++ATPGR D + ++ +V+ LV+D
Sbjct: 326 ARFVSGITFGLAVGGLNLRQQEQMLKSRPDIVIATPGRFIDHIRNSASFNVDSVEILVMD 385
Query: 324 EADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGR 383
EADRML+ GF+ ++ I+ +PS NRQ L+FSAT S+I+ L S LK V + +
Sbjct: 386 EADRMLEEGFQDELNEIM--GLLPS--NRQNLLFSATMNSKIKSLVSLSLKKPVRIMIDP 441
Query: 384 VGSTSENITQKILYVEDFD--KNDTLLDL---LAASNEGLTLIFVETKRAADSLTDFLIM 438
+ +TQ+ + + D K L +L L + + ++FV K A L + +
Sbjct: 442 PKKAATKLTQEFVRIRKRDHLKPALLFNLIRKLDPTGQKRIVVFVARKETAHRLRIIMGL 501
Query: 439 EGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDID 498
G +HG TQ +R +++ FK +L+ T +A+RGLDIP + VIN+D+P +
Sbjct: 502 LGMSVGELHGSLTQEQRLDSVNKFKNLEVPVLICTDLASRGLDIPKIEVVINYDMPKSYE 561
Query: 499 DYVHRIGRTGRAGNTGVATTFFNRGNKN 526
Y+HR+GRT RAG G + TF +++
Sbjct: 562 IYLHRVGRTARAGREGRSVTFVGESSQD 589
>ECU10g0440 [A] KOG0330 ATP-dependent RNA helicase
Length = 400
Score = 189 bits (479), Expect = 1e-47
Identities = 123/361 (34%), Positives = 192/361 (53%), Gaps = 23/361 (6%)
Query: 160 EFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLS 219
EF +D L+ + T+PT VQ+ +P V G D++A +QTGSGKT F+ P++S
Sbjct: 2 EFGDLRIDESLIKTCQEKGITRPTEVQRQVIPAVLGGGDVIAVSQTGSGKTLAFVLPIVS 61
Query: 220 ESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGG 279
+ Y +++APTREL++QI + F + ++ ++ GG
Sbjct: 62 HLLQKN-------------RSFY--CLVVAPTRELSSQIAECFNMFQ-ATGLRVCLLVGG 105
Query: 280 ASIDNQIKQMRYGCNLLVATPGRLTD-LLERRYISLANVKYLVLDEADRMLDMGFEPQIR 338
A+ + Q Q+ +++V TPGR+ + +L+ + V+ VLDEADR + F +
Sbjct: 106 ANFNVQANQLSKRPHVVVGTPGRIAEHVLKTKSFRTERVRKFVLDEADRFFEQDFVEDLE 165
Query: 339 RIVEGSDMPSV-DNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILY 397
I+ PS+ + RQTL+F+AT EI L+S LK + T + + L+
Sbjct: 166 TII-----PSLREKRQTLLFTATMSDEISKLSSSILKRPKTIRTAEKYETVPALKEYYLF 220
Query: 398 VEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERER 457
V KN L++LL S ++FV A ++ L GF + A+HG+ +Q +RE
Sbjct: 221 VAMKWKNSALVELLEMSQGMSVIVFVSMCVTARVMSLALARLGFCSEALHGELSQEKREE 280
Query: 458 ALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVAT 517
A+ +FK R +LV T + +RGLDI +V VINFD+P DY+HR+GRT RAG +G A
Sbjct: 281 AMRSFKESRFNVLVCTDLGSRGLDISHVDLVINFDVPKSGKDYIHRVGRTARAGRSGTAI 340
Query: 518 T 518
T
Sbjct: 341 T 341
>At1g51380 [J] KOG0328 Predicted ATP-dependent RNA helicase FAL1 involved in
rRNA maturation DEAD-box superfamily
Length = 392
Score = 188 bits (478), Expect = 2e-47
Identities = 125/395 (31%), Positives = 202/395 (50%), Gaps = 26/395 (6%)
Query: 156 EPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLF 215
+PI F ++ +L + + KP+ +Q+ ++ + GRD++A AQ+G+GKT
Sbjct: 19 KPIKSFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKTSMIAI 78
Query: 216 PVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMV 275
V N +KV ++L+P+RELA+Q + + ++
Sbjct: 79 SVCQ-------------IVNISSRKVQ--VLVLSPSRELASQTEKTIQAIGAHTNIQAHA 123
Query: 276 VYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEP 335
GG SI IK++ G + + TPGR+ D+++R + VK LVLDE+D ML G +
Sbjct: 124 CIGGKSIGEDIKKLERGVHAVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKGLKD 183
Query: 336 QIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKI 395
QI + +P + Q + SAT P EI + F+ D V + V T E I Q
Sbjct: 184 QIYDVYRA--LPH--DIQVCLISATLPQEILEMTEKFMTDPVRILVKPDELTLEGIKQ-- 237
Query: 396 LYVEDFDKN----DTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRT 451
Y D DK DTL DL +IF T++ D LT+ + F +++HGD+
Sbjct: 238 -YYVDVDKEEWKFDTLCDLYGRLTINQAIIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKR 296
Query: 452 QGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAG 511
Q ER+ ++ F++ ++ +L+A+ V ARG+D+ V+HVIN+D+PN+ + Y+HRIGR GR G
Sbjct: 297 QKERDDIMNQFRSFKSRVLIASDVWARGIDVQTVSHVINYDIPNNPELYIHRIGRAGRFG 356
Query: 512 NTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFL 546
GVA F + K++ +E+P+ L
Sbjct: 357 REGVAINFVKSSDMKDLKDIERHYGTKIREMPADL 391
>At2g45810 [A] KOG0326 ATP-dependent RNA helicase
Length = 528
Score = 188 bits (477), Expect = 2e-47
Identities = 128/389 (32%), Positives = 196/389 (49%), Gaps = 22/389 (5%)
Query: 159 SEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVL 218
+EF L LL I F KP+P+Q+ S+PI G D++A A+ G+GKTG F P L
Sbjct: 154 NEFEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTL 213
Query: 219 SESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYG 278
+ PE N+ I+ AVIL PTRELA Q K+ + ++ MV G
Sbjct: 214 EKI-------DPE---NNVIQ-----AVILVPTRELALQTSQVCKELSKYLKIEVMVTTG 258
Query: 279 GASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIR 338
G S+ + I ++ +LLV TPGR+ DL ++ L + LV+DEAD++L + F+P I
Sbjct: 259 GTSLRDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCAMLVMDEADKLLSVEFQPSIE 318
Query: 339 RIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKD-YVFLSVGRVGSTSENITQKILY 397
+++ +P ++RQ LMFSATFP ++ +LK Y+ + ++ T +TQ +
Sbjct: 319 ELIQF--LP--ESRQILMFSATFPVTVKSFKDRYLKKPYIINLMDQL--TLMGVTQYYAF 372
Query: 398 VEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERER 457
VE+ K L L + ++IF + + L + G+ IH Q R R
Sbjct: 373 VEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNR 432
Query: 458 ALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVAT 517
F+ G LV T + RG+DI V VINFD P + Y+HR+GR+GR G+ G+A
Sbjct: 433 VFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAV 492
Query: 518 TFFNRGNKNVAKELVSLLSEANQEVPSFL 546
++ + L + +PS +
Sbjct: 493 NLVTYEDRFKMYQTEQELGTEIKPIPSLI 521
>SPAC30D11.03 [A] KOG0338 ATP-dependent RNA helicase
Length = 754
Score = 187 bits (476), Expect = 3e-47
Identities = 124/390 (31%), Positives = 198/390 (49%), Gaps = 24/390 (6%)
Query: 159 SEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVL 218
S F S L +L + F PT +Q ++P+ G+D++ A TGSGKT F+ P+L
Sbjct: 259 SSFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPIL 318
Query: 219 SESFSSGPASTPEAAGNSYIKKVYPTA--VILAPTRELATQIYDEAKKFTYRSWVKPMVV 276
Y K PT +IL PTRELA Q + A K + + +
Sbjct: 319 ERLL--------------YRPKKVPTTRVLILCPTRELAMQCHSVATKIASFTDIMVCLC 364
Query: 277 YGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRY-ISLANVKYLVLDEADRMLDMGFEP 335
GG S+ Q +++R ++++ATPGR D + ++ N++ +V+DEADRML+ GF
Sbjct: 365 IGGLSLKLQEQELRKRPDIVIATPGRFIDHMRNSQGFTVENIEIMVMDEADRMLEDGFAD 424
Query: 336 QIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKI 395
++ I++ +RQT++FSAT ++ L L V + V +T++ +TQ+
Sbjct: 425 ELNEIIQACPK----SRQTMLFSATMTDKVDDLIRLSLNRPVRVFVDNKKTTAKLLTQEF 480
Query: 396 LYVE---DFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQ 452
+ V + + L+ L T+IF +K A + + AT IHG +Q
Sbjct: 481 VRVRPQRELLRPAMLIYLCKELFHRRTIIFFRSKAFAHKMRVIFGLLSLNATEIHGSLSQ 540
Query: 453 GERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGN 512
+R RAL F+ G+ L+AT VA+RG+DI + VIN++ P + Y+HR+GRT RAG
Sbjct: 541 EQRVRALEDFRDGKCNYLLATDVASRGIDIKGIEVVINYEAPATHEVYLHRVGRTARAGR 600
Query: 513 TGVATTFFNRGNKNVAKELVSLLSEANQEV 542
+G A T G++ V K + S N ++
Sbjct: 601 SGRAITLAGEGDRKVLKGVFKNSSAQNTKL 630
>At1g54270 [J] KOG0327 Translation initiation factor 4F helicase subunit
(eIF-4A) and related helicases
Length = 412
Score = 186 bits (472), Expect = 9e-47
Identities = 130/391 (33%), Positives = 197/391 (50%), Gaps = 20/391 (5%)
Query: 161 FHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSE 220
F + L LL I F KP+ +Q+ + G D++ AQ+G+GKT F VL +
Sbjct: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQ 100
Query: 221 SFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGA 280
+ + A++LAPTRELA QI + VK GG
Sbjct: 101 LDYA---------------LLQCQALVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGT 145
Query: 281 SIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRI 340
S+ + ++ G +++V TPGR+ D+L R+ + +K VLDEAD ML GF+ QI I
Sbjct: 146 SVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDI 205
Query: 341 VEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVED 400
+ P + Q +FSAT P E + F+ V + V R T E I Q + VE
Sbjct: 206 FQLLP-PKI---QVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEK 261
Query: 401 FD-KNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERAL 459
D K +TL DL ++IFV T+R D LTD + +A HGD Q R+ +
Sbjct: 262 EDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIM 321
Query: 460 SAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTF 519
F++G + +L+ T + ARG+D+ V+ VINFDLP ++Y+HRIGR+GR G GVA F
Sbjct: 322 REFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINF 381
Query: 520 FNRGNKNVAKELVSLLSEANQEVPSFLTTIM 550
++ + ++ + +E+PS + ++
Sbjct: 382 VTLDDQRMLFDIQKFYNVVVEELPSNVADLL 412
>At3g61240 [A] KOG0326 ATP-dependent RNA helicase
Length = 498
Score = 186 bits (471), Expect = 1e-46
Identities = 124/359 (34%), Positives = 184/359 (50%), Gaps = 22/359 (6%)
Query: 159 SEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVL 218
+EF L LL I F KP+P+Q+ S+PI G D++A A+ G+GKTG F PVL
Sbjct: 124 NEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVL 183
Query: 219 SESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYG 278
+ + N+ I+ A+IL PTRELA Q K+ + ++ MV G
Sbjct: 184 EKIDPN----------NNVIQ-----AMILVPTRELALQTSQVCKELSKYLNIQVMVTTG 228
Query: 279 GASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIR 338
G S+ + I ++ +LLV TPGR+ DL ++ L + LV+DEAD++L F+P +
Sbjct: 229 GTSLRDDIMRLHQPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLE 288
Query: 339 RIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFL-KDYVFLSVGRVGSTSENITQKILY 397
+++ +P NRQ LMFSATFP ++ L K YV + ++ T +TQ +
Sbjct: 289 ELIQF--LPQ--NRQFLMFSATFPVTVKAFKDRHLRKPYVINLMDQL--TLMGVTQYYAF 342
Query: 398 VEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERER 457
VE+ K L L + ++IF + + L + G+ IH Q R R
Sbjct: 343 VEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNR 402
Query: 458 ALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVA 516
F+ G LV T + RG+DI V VINFD P + Y+HR+GR+GR G+ G+A
Sbjct: 403 VFHEFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLA 461
>At5g05450 [A] KOG0345 ATP-dependent RNA helicase
Length = 593
Score = 185 bits (469), Expect = 2e-46
Identities = 128/377 (33%), Positives = 204/377 (53%), Gaps = 37/377 (9%)
Query: 164 PPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLS--ES 221
PPL +++ + + F TPVQ ++P++ + +D+ A TGSGKT F+ P++
Sbjct: 21 PPLSGDIIEALNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRR 80
Query: 222 FSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYR-SWVKPMVVYGGA 280
+S P + G VI++PTREL+TQIY+ A+ F + V +++ GG
Sbjct: 81 STSFPPKPHQVMG-----------VIISPTRELSTQIYNVAQPFVSTLANVNSVLLVGGR 129
Query: 281 SIDNQIKQMRY-GCNLLVATPGRLTDLLERRYI-SLANVKYLVLDEADRMLDMGFEPQIR 338
+ +K + GCN+L+ TPGRL+D++ER I N++ L+LDEADR+L+MGF+ Q+
Sbjct: 130 EVKADMKIIEEEGCNVLIGTPGRLSDIMERMEILDFRNLEILILDEADRLLEMGFQRQVN 189
Query: 339 RIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQ----- 393
I+ S +P R+T +FSAT ++ LA L++ V + V R S SE+ Q
Sbjct: 190 YII--SRLPK--QRRTGLFSATQTEGVEELAKAGLRNPVRVEV-RAKSKSESSQQLTNSK 244
Query: 394 -------KILYVEDFDKNDTLLDLLAASNEGLTLIFVETKRAADS----LTDFLIMEGFK 442
+ + E K+ L+DLL +++ ++F T + D L+ ++
Sbjct: 245 TPSGLHLEYMECEADKKSSQLVDLLIKNSDKKLIVFFMTCASVDYWGLVLSKIPALKSIS 304
Query: 443 ATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVH 502
IHGD Q R++AL++F + L+ T VAARGLDIP + +V+ +D P D + + H
Sbjct: 305 LIPIHGDMKQNARDKALASFTKASSGALLCTDVAARGLDIPGIDYVVQYDPPQDPNMFNH 364
Query: 503 RIGRTGRAGNTGVATTF 519
R GRT R G G A F
Sbjct: 365 RAGRTARLGRQGRAIVF 381
>SPAC1F7.02c [A] KOG0342 ATP-dependent RNA helicase pitchoune
Length = 578
Score = 184 bits (467), Expect = 3e-46
Identities = 131/390 (33%), Positives = 203/390 (51%), Gaps = 22/390 (5%)
Query: 128 EDKSFQSSGINFDNY-DDIPVEASGN---DVPEPISEFHSPPLDPLLLDNIKLARFTKPT 183
++ S +S DN +D V+ S N I +F L + IK F T
Sbjct: 54 QNTSVESESEELDNENEDERVQKSVNLNASSTSDIEKFSDLQLSENIQKAIKEMGFETMT 113
Query: 184 PVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYP 243
+QK S+P + AGRD++ A+TGSGKT FL P + ++ + +
Sbjct: 114 EIQKRSIPPLLAGRDVLGAAKTGSGKTLAFLIPTIEMLYAL-----------KFKPRNGT 162
Query: 244 TAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRL 303
+I++PTRELA QI+ AK+ +V GGA+ + ++ G NLLVATPGRL
Sbjct: 163 GVIIISPTRELALQIFGVAKELLKYHHQTFGIVIGGANRRAEADKLVKGVNLLVATPGRL 222
Query: 304 TDLLER-RYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFP 362
D L+ + N++ LV+DEADR+L++GFE ++R+I++ +PS +NRQTL+FSAT
Sbjct: 223 LDHLQNTKGFVFRNLRSLVIDEADRILEIGFEDEMRQIMK--ILPS-ENRQTLLFSATQT 279
Query: 363 SEIQHLASDFLKD---YVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNEGLT 419
++++ LA LK YV + G+ ST E + Q + V+ + L L + +
Sbjct: 280 TKVEDLARISLKPGPLYVNVDSGKPTSTVEGLEQGYVVVDSDKRFLLLFSFLKRNLKKKV 339
Query: 420 LIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARG 479
++F+ + + + + L +HG + Q R F IL+ T VAARG
Sbjct: 340 IVFMSSCASVKYMAELLNYIDLPVLDLHGKQKQQRRTNTFFEFCNAEKGILLCTNVAARG 399
Query: 480 LDIPNVTHVINFDLPNDIDDYVHRIGRTGR 509
LDIP V ++ +D P+D DY+HR+GRT R
Sbjct: 400 LDIPAVDWIVQYDPPDDPRDYIHRVGRTAR 429
>SPBC543.06c [A] KOG0340 ATP-dependent RNA helicase
Length = 453
Score = 183 bits (464), Expect = 8e-46
Identities = 123/360 (34%), Positives = 185/360 (51%), Gaps = 28/360 (7%)
Query: 166 LDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSG 225
+ P L+D +K +PT +Q+ + + GR+ + A+TGSGKT F P++ E +S
Sbjct: 14 ISPWLIDTLKALAIYEPTDIQEGVIAQILEGRNCIGGAKTGSGKTAAFALPII-EKWSKD 72
Query: 226 PASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQ 285
P+ A+IL PTRELA QI ++ +K ++ GG + Q
Sbjct: 73 PSGI--------------FALILTPTRELAIQIDEQFAALGANLNLKHALIVGGMDMIRQ 118
Query: 286 IKQMRYGCNLLVATPGRLTDLL----ERRYISLANVKYLVLDEADRMLDMGFEPQIRRIV 341
+ +++VATPGRL DL+ E L +K+LV+DEADR+L F +
Sbjct: 119 SIDLSKRPHVVVATPGRLADLIRSNGEETIAGLRRIKFLVMDEADRLLSPTFADDLDDCF 178
Query: 342 EGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKD-----YVFLSVGRVGSTSENITQKIL 396
S +P+ ++RQTL+F+AT I+ L K+ +++ S + Q +
Sbjct: 179 --SVLPASEDRQTLLFTATVTDAIRQLKYQPQKNNKPPLWLYEVETDNISVPSTLQQSYI 236
Query: 397 YVEDFDKNDTLLDLLAASNEGL--TLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGE 454
+V + L+ LL +IFV R A+ + L + + T +H + Q E
Sbjct: 237 FVSSQVREAYLVHLLTIPENAKKSAIIFVNRTRTAELIYSILRLLELRVTELHSEMVQRE 296
Query: 455 RERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTG 514
R +L F+ A ILVAT VA+RGLDIP+V VINFDLP D DDY+HR+GRT RAG +G
Sbjct: 297 RINSLGRFRAEAAKILVATDVASRGLDIPSVQLVINFDLPRDPDDYIHRVGRTARAGRSG 356
>At5g08620 [A] KOG0342 ATP-dependent RNA helicase pitchoune
Length = 563
Score = 183 bits (464), Expect = 8e-46
Identities = 129/371 (34%), Positives = 192/371 (50%), Gaps = 29/371 (7%)
Query: 159 SEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVL 218
+ F PL PL L I+ A F T VQ+ ++P++ G+D++A A+TG+GKT FL P +
Sbjct: 80 TRFDQFPLSPLTLKGIEDAGFKTMTVVQEATLPLILQGKDILAKAKTGTGKTVAFLLPSI 139
Query: 219 SESFSSGPASTPEAAGNSYIKKVYPTAVILA--PTRELATQIYDEAK-KFTYRSWVKPMV 275
+ PAS +P ++L PTRELA Q EA Y + V
Sbjct: 140 EAVIKAPPASRDNR---------HPPIIVLVVCPTRELACQAAAEANILLKYHPSIGVQV 190
Query: 276 VYGGASIDNQIKQMRYG-CNLLVATPGRLTDLLERRY---ISLANVKYLVLDEADRMLDM 331
V GG + + ++++ C +LVATPGRL D ++ L VK LVLDEAD +LDM
Sbjct: 191 VIGGTKLPTEQRRLQKSPCQILVATPGRLKDHIDNTSGFATRLMGVKVLVLDEADHLLDM 250
Query: 332 GFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLK-DYVFLSVGR--VGSTS 388
GF +I RI+ +P RQT +FSAT E++ + LK D+ F++ + G T
Sbjct: 251 GFRREIERIIAA--VPK--QRQTFLFSATVSDEVRQICHVALKRDHEFVNCVQEGAGETH 306
Query: 389 ENITQKILYVEDFDKNDTLLDLLA----ASNEGL-TLIFVETKRAADSLTDFLIMEGFKA 443
+ ++Q + + D++ +LL L N G +IF T + D L
Sbjct: 307 QKVSQMYM-IASLDRHFSLLYGLLKKHITDNVGYKVIIFCTTAMVTRLVADLLGKLSLNV 365
Query: 444 TAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHR 503
IH + Q R R F+ ++ ILV + V+ARG+D P+V+ V+ LP+D + Y+HR
Sbjct: 366 REIHSRKPQSYRTRVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHR 425
Query: 504 IGRTGRAGNTG 514
+GRTGR G G
Sbjct: 426 LGRTGRKGKEG 436
>7291960_2 [A] KOG0337 ATP-dependent RNA helicase
Length = 883
Score = 182 bits (463), Expect = 1e-45
Identities = 116/358 (32%), Positives = 182/358 (50%), Gaps = 19/358 (5%)
Query: 161 FHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSE 220
F S L L+ I + PTP+Q+ ++P++ GRD++A A+TGSGKT FL P+ +
Sbjct: 97 FQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFEK 156
Query: 221 SFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGA 280
P A +IL+PTRELA Q Y K+ +K ++V GG
Sbjct: 157 LQRREPTKGARA-------------LILSPTRELAVQTYKFIKELGRFMELKSILVLGGD 203
Query: 281 SIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRI 340
S+D+Q + +++VATPGR L + L +++Y+V DEADR+ +MGF Q+
Sbjct: 204 SMDSQFSAIHTCPDVIVATPGRFLHLCVEMDLKLNSIEYVVFDEADRLFEMGFGEQLNET 263
Query: 341 VEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVED 400
+ +PS +RQT+MFSAT P + A L D V + + + + K LY
Sbjct: 264 LH--RLPS--SRQTVMFSATLPKLLVEFARAGLNDPVLIRLDVESKLPDALALKFLYCRP 319
Query: 401 FDKNDTLLDLL--AASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERA 458
D+ L+ LL + T++F T+ + ++ L G +++ R+
Sbjct: 320 DDRYTALVVLLKYVIPVQSQTVVFAGTQHHVELISYILTEAGISNASVYSSLDPAARKIN 379
Query: 459 LSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVA 516
+ F + ++L+ T VAARG+DIP++ V+N P +VHR+GR RAG TG A
Sbjct: 380 TAKFVNKKVSVLIVTDVAARGIDIPSLDFVVNLHFPGKPKLFVHRVGRCARAGRTGTA 437
>At5g11200 [A] KOG0329 ATP-dependent RNA helicase
Length = 427
Score = 180 bits (456), Expect = 7e-45
Identities = 124/364 (34%), Positives = 185/364 (50%), Gaps = 21/364 (5%)
Query: 159 SEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVL 218
S F L P LL I + F P+ VQ +P G D++ A++G GKT F+ L
Sbjct: 46 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTL 105
Query: 219 SESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKF-TYRSWVKPMVVY 277
+ P +A++L TRELA QI +E +F TY K V Y
Sbjct: 106 QQ-IEPSPGQV--------------SALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFY 150
Query: 278 GGASIDNQIKQMRYGC-NLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQ 336
GG +I ++ C +++V TPGR+ L + +SL NV++ +LDE D+ML+
Sbjct: 151 GGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLE---SLD 207
Query: 337 IRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGS-TSENITQKI 395
+RR V+ + ++Q +MFSAT EI+ + F++D + + V T + Q
Sbjct: 208 MRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHY 267
Query: 396 LYVEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGER 455
+ + + +KN L DLL A + +IFV++ A L L+ F + IH +Q ER
Sbjct: 268 IKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEER 327
Query: 456 ERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGV 515
+FK G ILVAT + RG+DI V VIN+D+P+ D Y+HR+GR GR G G+
Sbjct: 328 LTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGL 387
Query: 516 ATTF 519
A TF
Sbjct: 388 AITF 391
>Hs19923595 [A] KOG0337 ATP-dependent RNA helicase
Length = 882
Score = 179 bits (453), Expect = 1e-44
Identities = 115/358 (32%), Positives = 185/358 (51%), Gaps = 19/358 (5%)
Query: 161 FHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSE 220
F S L + I + PTP+Q+ ++P++ G+D++A A+TGSGKT FL P+ E
Sbjct: 98 FQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLPMF-E 156
Query: 221 SFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGA 280
+ A T A +IL+PTRELA Q K+ + +K ++ GG
Sbjct: 157 RLKTHSAQTGARA------------LILSPTRELALQTLKFTKELGKFTGLKTALILGGD 204
Query: 281 SIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRI 340
+++Q + ++++ATPGRL + + L +V+Y+V DEADR+ +MGF Q++ I
Sbjct: 205 RMEDQFAALHENPDIIIATPGRLVHVAVEMSLKLQSVEYVVFDEADRLFEMGFAEQLQEI 264
Query: 341 VEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVED 400
+ + +P QT++FSAT P + A L + V + + +E + V +
Sbjct: 265 I--ARLPG--GHQTVLFSATLPKLLVEFARAGLTEPVLIRLDVDTKLNEQLKTSFFLVRE 320
Query: 401 FDKNDTLLDLL--AASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERA 458
K LL LL + T++FV TK A+ LT+ L + I+ R+
Sbjct: 321 DTKAAVLLHLLHNVVRPQDQTVVFVATKHHAEYLTELLTTQRVSCAHIYSALDPTARKIN 380
Query: 459 LSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVA 516
L+ F G+ + L+ T +AARGLDIP + +VIN+ P ++HR+GR RAG +G A
Sbjct: 381 LAKFTLGKCSTLIVTDLAARGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTA 438
>Hs21040371 [A] KOG0329 ATP-dependent RNA helicase
Length = 427
Score = 178 bits (452), Expect = 2e-44
Identities = 127/380 (33%), Positives = 190/380 (49%), Gaps = 21/380 (5%)
Query: 148 EASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGS 207
+ G+ V S F L P LL I F P+ VQ +P G D++ A++G
Sbjct: 33 DIKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGM 92
Query: 208 GKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFT- 266
GKT F+ L + N + T +++ TRELA QI E ++F+
Sbjct: 93 GKTAVFVLATLQQI----------EPVNGQV-----TVLVMCHTRELAFQISKEYERFSK 137
Query: 267 YRSWVKPMVVYGGASIDNQIKQMRYGC-NLLVATPGRLTDLLERRYISLANVKYLVLDEA 325
Y VK V +GG SI + ++ C +++V TPGR+ L+ R SL NVK+ VLDE
Sbjct: 138 YMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNVKHFVLDEC 197
Query: 326 DRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVG-RV 384
D+ML+ + +RR V+ + +Q +MFSAT +I+ + F++D + + V
Sbjct: 198 DKMLE---QLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFMQDPMEVFVDDET 254
Query: 385 GSTSENITQKILYVEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKAT 444
T + Q + ++D +KN L DLL +IFV++ + +L L+ + F A
Sbjct: 255 KLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVIIFVKSVQRCMALAQLLVEQNFPAI 314
Query: 445 AIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRI 504
AIH Q ER FK + ILVAT + RG+DI V V N+D+P D D Y+HR+
Sbjct: 315 AIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRV 374
Query: 505 GRTGRAGNTGVATTFFNRGN 524
R GR G G+A TF + N
Sbjct: 375 ARAGRFGTKGLAITFVSDEN 394
>CE25231 [A] KOG0343 RNA Helicase
Length = 732
Score = 178 bits (451), Expect = 3e-44
Identities = 122/359 (33%), Positives = 188/359 (51%), Gaps = 21/359 (5%)
Query: 161 FHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSE 220
F PL L+ +K +TKPT +Q+ ++ G D++ A+TGSGKT + PVL E
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVL-E 136
Query: 221 SFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGA 280
+ S G A+I++PTRELA Q + +V GG+
Sbjct: 137 ALWRAKWSPDYGLG----------ALIISPTRELALQTFSTINAVGAHHGFSCGLVIGGS 186
Query: 281 SIDNQIKQMRYGCNLLVATPGRLTDLL-ERRYISLANVKYLVLDEADRMLDMGFEPQIRR 339
+ + ++ G N++V TPGRL + E +S +++ LVLDEADRMLDMGF Q+
Sbjct: 187 DVAFERNRIS-GINIIVCTPGRLLQHMDENAQMSCDSLQVLVLDEADRMLDMGFSKQLNS 245
Query: 340 IVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGS--TSENITQKILY 397
I+ +++P+ RQTL+FSAT ++ L D VF+SV S T +N+ Q +
Sbjct: 246 II--NNLPA--ERQTLLFSATQTRNVKDLCRVCTNDPVFVSVHENASAATPDNLKQSYVI 301
Query: 398 VEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFL--IMEGFKATAIHGDRTQGER 455
VE+ K + L + A + +L+FV + + A LT+ + G + G Q +R
Sbjct: 302 VEEEHKINALWSFIEAHRKKKSLVFVSSCKQARFLTEAFSQLRPGLPVMGLWGTMNQKKR 361
Query: 456 ERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTG 514
+ F +A +L+AT VA+RGLD ++ VI D P IDDY+HR+GR+ R ++G
Sbjct: 362 IETFTKFDESKAAVLIATDVASRGLDFEHIDWVIQVDCPAQIDDYIHRVGRSARMDDSG 420
>At5g11170 [A] KOG0329 ATP-dependent RNA helicase
Length = 435
Score = 177 bits (450), Expect = 3e-44
Identities = 123/364 (33%), Positives = 184/364 (49%), Gaps = 21/364 (5%)
Query: 159 SEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVL 218
S F L P LL I + F P+ VQ +P G D++ A++G GKT F+ L
Sbjct: 46 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTL 105
Query: 219 SESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKF-TYRSWVKPMVVY 277
+ P +A++L TRELA QI +E +F TY K V Y
Sbjct: 106 QQ-IEPSPGQV--------------SALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFY 150
Query: 278 GGASIDNQIKQMRYGC-NLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQ 336
GG +I ++ C +++V TPGR+ L + +SL NV++ +LDE D+ML+
Sbjct: 151 GGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLE---SLD 207
Query: 337 IRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGS-TSENITQKI 395
+RR V+ + ++Q +MFSAT EI+ + F++D + + V T + Q
Sbjct: 208 MRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHY 267
Query: 396 LYVEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGER 455
+ + + +K L DLL A + +IFV++ A L L+ F + IH +Q ER
Sbjct: 268 IKLSEMEKTRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEER 327
Query: 456 ERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGV 515
+FK G ILVAT + RG+DI V VIN+D+P+ D Y+HR+GR GR G G+
Sbjct: 328 LTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGL 387
Query: 516 ATTF 519
A TF
Sbjct: 388 AITF 391
>YOR046c [A] KOG0332 ATP-dependent RNA helicase
Length = 482
Score = 177 bits (449), Expect = 4e-44
Identities = 132/393 (33%), Positives = 199/393 (50%), Gaps = 43/393 (10%)
Query: 147 VEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAG--RDLMACAQ 204
++A N F L P LL I +F KP+ +Q+ ++P++ R+++A +Q
Sbjct: 80 IQADPNSPLYSAKSFDELGLAPELLKGIYAMKFQKPSKIQERALPLLLHNPPRNMIAQSQ 139
Query: 205 TGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQ---IYDE 261
+G+GKT F +L+ PE A P A+ LAP+RELA Q + E
Sbjct: 140 SGTGKTAAFSLTMLTRV-------NPEDAS--------PQAICLAPSRELARQTLEVVQE 184
Query: 262 AKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLV 321
KFT ++V D+ K + ++V TPG + DL+ R+ + L +K V
Sbjct: 185 MGKFT--KITSQLIVP-----DSFEKNKQINAQVIVGTPGTVLDLMRRKLMQLQKIKIFV 237
Query: 322 LDEADRMLDM-GFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLS 380
LDEAD MLD G Q R+ +P + Q ++FSATF ++ A + + L
Sbjct: 238 LDEADNMLDQQGLGDQCIRVKRF--LPK--DTQLVLFSATFADAVRQYAKKIVPNANTLE 293
Query: 381 VGRVGSTSENITQKILYVE---DFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLI 437
+ + I Q LY++ + DK D L +L G ++IFV TK+ A+ L L
Sbjct: 294 LQTNEVNVDAIKQ--LYMDCKNEADKFDVLTELYGLMTIGSSIIFVATKKTANVLYGKLK 351
Query: 438 MEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPN-- 495
EG + + +HGD ER+R + F+ GR+ +L+ T V ARG+DIP V+ V+N+DLP
Sbjct: 352 SEGHEVSILHGDLQTQERDRLIDDFREGRSKVLITTNVLARGIDIPTVSMVVNYDLPTLA 411
Query: 496 ----DIDDYVHRIGRTGRAGNTGVATTFFNRGN 524
D Y+HRIGRTGR G GVA +F + N
Sbjct: 412 NGQADPATYIHRIGRTGRFGRKGVAISFVHDKN 444
>At1g71370 [A] KOG0345 ATP-dependent RNA helicase
Length = 558
Score = 177 bits (449), Expect = 4e-44
Identities = 121/366 (33%), Positives = 193/366 (52%), Gaps = 24/366 (6%)
Query: 164 PPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFS 223
PPL +++ + + F TPVQ ++P + + +D++ A TGSGKT FL P +
Sbjct: 21 PPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRR 80
Query: 224 SGPASTPEAAGNSYIKKVYPT-AVILAPTRELATQIYDEAKKFTYR-SWVKPMVVYGGAS 281
S NSY K + VI++PTREL+ QI+ A+ F V +++ GG
Sbjct: 81 S----------NSYPPKPHQVMGVIISPTRELSAQIHKVAEPFVSTLPNVNSVLLVGGRE 130
Query: 282 IDNQIKQMRY-GCNLLVATPGRLTDLLER-RYISLANVKYLVLDEADRMLDMGFEPQIRR 339
++ + + G NLL+ TPGRL+D+++R ++ N++ L+LDEADR+LDMGF+ Q+
Sbjct: 131 VEADMNTLEEEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNY 190
Query: 340 IVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGS--TSENITQKILY 397
I+ S +P R+T +FSAT + LA L++ + + G TS + + L
Sbjct: 191 II--SRLPK--QRRTGLFSATQTQAVADLAKAGLRNAMEVISGAESKSKTSSGLYCEYLK 246
Query: 398 VEDFDKNDTLLDLLAASNEGLTLIFVETKRAADS----LTDFLIMEGFKATAIHGDRTQG 453
E K+ L+ LL + ++F T D L+ ++ + HG Q
Sbjct: 247 CEADQKSSQLVHLLIENKNKKLVVFFMTCACVDYWGLVLSKIPTLKSISFFSTHGKMDQK 306
Query: 454 ERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNT 513
R+ AL++F + +L+ T VAARGLDIP + +V+ +D P D D ++HR+GRT R
Sbjct: 307 GRDTALASFTEASSGVLLCTDVAARGLDIPGIDYVVQYDPPQDPDVFIHRVGRTARMERQ 366
Query: 514 GVATTF 519
G A F
Sbjct: 367 GRAIVF 372
>YDL031w [A] KOG0337 ATP-dependent RNA helicase
Length = 995
Score = 175 bits (444), Expect = 2e-43
Identities = 136/473 (28%), Positives = 226/473 (47%), Gaps = 81/473 (17%)
Query: 107 DGKHVPAAKNANLELELFGVAE--DKSFQSSGINF--DNYDDIPVEASGNDVPEPISEFH 162
+ K + KN+ E+ F + E D +SG D+ DD+ S N++ + +
Sbjct: 78 ENKDIKKKKNSKKEIAAFPMLEMSDDENNASGKTQTGDDEDDVNEYFSTNNLEKTKHKKG 137
Query: 163 SPP---LDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLS 219
S P L ++L+NIK F +PTP+Q+ ++P++ RD++ A+TGSGKT F+ P++
Sbjct: 138 SFPSFGLSKIVLNNIKRKGFRQPTPIQRKTIPLILQSRDIVGMARTGSGKTAAFILPMVE 197
Query: 220 ESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGG 279
+ S+ K+ AVIL+P+RELA Q ++ K F + ++ +++ GG
Sbjct: 198 KL-------------KSHSGKIGARAVILSPSRELAMQTFNVFKDFARGTELRSVLLTGG 244
Query: 280 ASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRR 339
S++ Q M ++++ATPGR L + L +V+Y+V DEADR+ +MGF+ Q+
Sbjct: 245 DSLEEQFGMMMTNPDVIIATPGRFLHLKVEMNLDLKSVEYVVFDEADRLFEMGFQEQLNE 304
Query: 340 IVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVE 399
++ + +P+ RQTL+FSAT P+ + L + V + + SEN+ L +
Sbjct: 305 LL--ASLPT--TRQTLLFSATLPNSLVDFVKAGLVNPVLVRLDAETKVSENLEMLFLSSK 360
Query: 400 DFDKNDTLLDLL-------AASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQ 452
+ D+ LL +L A++E L + + ADS +D K ++ +
Sbjct: 361 NADREANLLYILQEIIKIPLATSEQLQKL-QNSNNEADSDSDDENDRQKKRRNFKKEKFR 419
Query: 453 GERERALSAFKTGRATIL------------------------------------------ 470
++ A + + +ATIL
Sbjct: 420 KQKMPAANELPSEKATILFVPTRHHVEYISQLLRDCGYLISYIYGTLDQHARKRQLYNFR 479
Query: 471 -------VATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVA 516
V T VAARG+DIP + +VIN+ LP +VHR+GRT RAGN G A
Sbjct: 480 AGLTSILVVTDVAARGVDIPMLANVINYTLPGSSKIFVHRVGRTARAGNKGWA 532
>Hs4758140 [A] KOG0326 ATP-dependent RNA helicase
Length = 472
Score = 175 bits (443), Expect = 2e-43
Identities = 119/388 (30%), Positives = 193/388 (49%), Gaps = 23/388 (5%)
Query: 159 SEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVL 218
+EF L LL I + KP+P+Q+ S+PI +GRD++A A+ G+GK+G +L P+L
Sbjct: 85 NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLL 144
Query: 219 SESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFT-YRSWVKPMVVY 277
+KK A+++ PTRELA Q+ + + + K M
Sbjct: 145 ERLD---------------LKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATT 189
Query: 278 GGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQI 337
GG ++ + I ++ ++++ATPGR+ DL+++ + +V+ +VLDEAD++L F
Sbjct: 190 GGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFV--- 246
Query: 338 RRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFL-KDYVFLSVGRVGSTSENITQKIL 396
+I+E + NRQ L++SATFP +Q + L K Y + + T + +TQ
Sbjct: 247 -QIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLMEEL--TLKGVTQYYA 303
Query: 397 YVEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERE 456
YV + K L L + ++IF + + + L + G+ IH Q R
Sbjct: 304 YVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRN 363
Query: 457 RALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVA 516
R F+ G LV T + RG+DI V VINFD P + Y+HRIGR+GR G+ G+A
Sbjct: 364 RVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLA 423
Query: 517 TTFFNRGNKNVAKELVSLLSEANQEVPS 544
++ K + L + +PS
Sbjct: 424 INLITYDDRFNLKSIEEQLGTEIKPIPS 451
>YHR169w [A] KOG0340 ATP-dependent RNA helicase
Length = 431
Score = 174 bits (440), Expect = 5e-43
Identities = 127/377 (33%), Positives = 188/377 (49%), Gaps = 35/377 (9%)
Query: 158 ISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPV 217
+++F S L L ++++ + T+PT +QK +P + GRD + A+TGSGKT F P+
Sbjct: 1 MADFKSLGLSKWLTESLRAMKITQPTAIQKACIPKILEGRDCIGGAKTGSGKTIAFAGPM 60
Query: 218 LSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVY 277
L++ +S P+ V+L PTRELA QI ++ ++ V+
Sbjct: 61 LTK-WSEDPSGM--------------FGVVLTPTRELAMQIAEQFTALGSSMNIRVSVIV 105
Query: 278 GGASIDNQIKQMRYGCNLLVATPGRLTDLL----ERRYISLANVKYLVLDEADRMLDMGF 333
GG SI Q ++ + ++ATPGRL + + L KYLVLDEAD +L F
Sbjct: 106 GGESIVQQALDLQRKPHFIIATPGRLAHHIMSSGDDTVGGLMRAKYLVLDEADILLTSTF 165
Query: 334 EPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKD-------YVFLSVGRVGS 386
+ + S +P D RQTL+F+AT +++ L + ++ Y SV V
Sbjct: 166 ADHLATCI--SALPPKDKRQTLLFTATITDQVKSLQNAPVQKGKPPLFAYQVESVDNVAI 223
Query: 387 TSENITQKILY--VEDFDKNDTLLDLLAASN--EGLTLIFVETKRAADSLTDFLIMEGFK 442
S T KI Y V + K L LL +IFV A+ L L +
Sbjct: 224 PS---TLKIEYILVPEHVKEAYLYQLLTCEEYENKTAIIFVNRTMTAEILRRTLKQLEVR 280
Query: 443 ATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVH 502
++H Q ER +L F+ A IL+AT VA+RGLDIP V V+N+D+P+D D ++H
Sbjct: 281 VASLHSQMPQQERTNSLHRFRANAARILIATDVASRGLDIPTVELVVNYDIPSDPDVFIH 340
Query: 503 RIGRTGRAGNTGVATTF 519
R GRT RAG G A +F
Sbjct: 341 RSGRTARAGRIGDAISF 357
>CE03025 [A] KOG0329 ATP-dependent RNA helicase
Length = 425
Score = 174 bits (440), Expect = 5e-43
Identities = 126/380 (33%), Positives = 190/380 (49%), Gaps = 25/380 (6%)
Query: 159 SEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVL 218
S F L P +L I F P+ VQ +P G D++ A++G GKT F+ L
Sbjct: 41 SGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTL 100
Query: 219 SESFS-SGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFT-YRSWVKPMVV 276
+ G S V + TRELA QI E ++F+ Y VK V
Sbjct: 101 QQLEPVDGEVSV----------------VCMCHTRELAFQISKEYERFSKYLPGVKVAVF 144
Query: 277 YGGASIDNQIKQMRYGC-NLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEP 335
+GG +I +++ C +++V TPGR+ L + L VKY VLDE D+M+ +
Sbjct: 145 FGGMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMIG---DA 201
Query: 336 QIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGS-TSENITQK 394
+RR V+ + +Q +MFSAT P E++ + F++D + + V T + Q
Sbjct: 202 DMRRDVQEIVKMTPQQKQVMMFSATLPKELRTVCKRFMQDPMEVYVDDEAKLTLHGLQQH 261
Query: 395 ILYVEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGE 454
+ +++ +KN LL+LL A +IFV+ + ++L L + F + AIH Q E
Sbjct: 262 YVKLKEAEKNRRLLNLLDALEFNQVVIFVKAVKRCEALHQLLTEQNFPSIAIHRQMAQEE 321
Query: 455 RERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTG 514
R AFK + ILVAT + RG+DI V V N+D+P D D Y+HR+ R GR G G
Sbjct: 322 RLSRYQAFKDFQKRILVATDLFGRGMDIERVNIVFNYDMPEDSDSYLHRVARAGRFGTKG 381
Query: 515 VATTFFNRGNKNVAKELVSL 534
+A TF + ++N AK L S+
Sbjct: 382 LAITFVS--DENDAKTLNSV 399
>YJL033w [A] KOG0343 RNA Helicase
Length = 770
Score = 173 bits (439), Expect = 6e-43
Identities = 124/398 (31%), Positives = 191/398 (47%), Gaps = 36/398 (9%)
Query: 128 EDKSFQSSGINFDNYDDIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQK 187
ED+ ++ D YD +A F P+ L ++ + F K T +Q
Sbjct: 19 EDEYIENLKTKIDEYDPKITKAKF---------FKDLPISDPTLKGLRESSFIKLTEIQA 69
Query: 188 YSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVI 247
S+P+ G D++A A+TGSGKT FL PV+ + + E G A+I
Sbjct: 70 DSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIEKLYRE---KWTEFDGLG--------ALI 118
Query: 248 LAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLL 307
++PTRELA QIY+ K + +V GG + +++++ N+L+ TPGR+ L
Sbjct: 119 ISPTRELAMQIYEVLTKIGSHTSFSAGLVIGGKDVKFELERISR-INILIGTPGRILQHL 177
Query: 308 ERRY-ISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQ 366
++ ++ +N++ LVLDEADR LDMGF+ + IV +RQTL+FSAT +
Sbjct: 178 DQAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTLS----PSRQTLLFSATQSQSVA 233
Query: 367 HLASDFLKDYVFL--------SVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNEGL 418
LA L DY + SV + ST E + Q + V DK D L + + +
Sbjct: 234 DLARLSLTDYKTVGTHDVMDGSVNKEASTPETLQQFYIEVPLADKLDILFSFIKSHLKCK 293
Query: 419 TLIFVETKRAADSLTDFL--IMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVA 476
++F+ + + + + + G +HG + Q R L F + L AT V
Sbjct: 294 MIVFLSSSKQVHFVYETFRKMQPGISLMHLHGRQKQRARTETLDKFNRAQQVCLFATDVV 353
Query: 477 ARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTG 514
ARG+D P V V+ D P D+D Y+HR+GR R G G
Sbjct: 354 ARGIDFPAVDWVVQVDCPEDVDTYIHRVGRCARYGKKG 391
>YDL160c [A] KOG0326 ATP-dependent RNA helicase
Length = 506
Score = 172 bits (437), Expect = 1e-42
Identities = 120/381 (31%), Positives = 185/381 (48%), Gaps = 25/381 (6%)
Query: 170 LLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPAST 229
LL I A F KP+P+Q+ ++P+ GRD++A A+ G+GKT F+ P L +
Sbjct: 57 LLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKV-------- 108
Query: 230 PEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQM 289
+ K+ A+I+ PTRELA Q + + MV GG ++ + I ++
Sbjct: 109 -----KPKLNKIQ--ALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRL 161
Query: 290 RYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSV 349
++LV TPGR+ DL R+ L++ ++DEAD+ML F+ I +I+ S +P
Sbjct: 162 NETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQIL--SFLPPT 219
Query: 350 DNRQTLMFSATFPSEIQHLASDFL-KDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLL 408
Q+L+FSATFP ++ L K Y + + T + ITQ +VE+ K L
Sbjct: 220 --HQSLLFSATFPLTVKEFMVKHLHKPYEINLMEEL--TLKGITQYYAFVEERQKLHCLN 275
Query: 409 DLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRAT 468
L + +IF + + L + G+ H Q ER + F+ G+
Sbjct: 276 TLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQGKVR 335
Query: 469 ILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVA 528
LV + + RG+DI V VINFD P + Y+HRIGR+GR G+ G+A N N N
Sbjct: 336 TLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLA---INLINWNDR 392
Query: 529 KELVSLLSEANQEVPSFLTTI 549
L + E E+ + TI
Sbjct: 393 FNLYKIEQELGTEIAAIPATI 413
>CE27336 [A] KOG0334 RNA helicase
Length = 436
Score = 172 bits (436), Expect = 1e-42
Identities = 106/274 (38%), Positives = 143/274 (51%), Gaps = 49/274 (17%)
Query: 243 PTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGR 302
P AVIL PTRELA Q Y EA KF +K YGG I QI ++ G ++V TPGR
Sbjct: 117 PIAVILTPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADLKRGAEIVVCTPGR 176
Query: 303 LTDLLER---RYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSA 359
+ D+L + +L V YLVLDEADRM GFEPQ
Sbjct: 177 MIDVLAANSGKVTNLRRVTYLVLDEADRMFHKGFEPQ----------------------- 213
Query: 360 TFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAAS-NEGL 418
VG +ITQ + + K LL+LL +EG
Sbjct: 214 ---------------------VGGKSVVCSDITQNAVICAEHQKFLKLLELLGMYYDEGS 252
Query: 419 TLIFVETKRAADSLTDFLIMEGFKATA-IHGDRTQGERERALSAFKTGRATILVATAVAA 477
+++FV+ + AD + D L+ G+ + A +HG Q +R+ +++ FKTG +LVAT+VAA
Sbjct: 253 SIVFVDKQEKADDIVDQLMRTGYNSVASLHGGIDQHDRDSSIADFKTGVIKVLVATSVAA 312
Query: 478 RGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAG 511
RGLD+ N+ V+N+D PN +DYVHR+GRTGRAG
Sbjct: 313 RGLDVKNLILVVNYDCPNHYEDYVHRVGRTGRAG 346
>Hs4758112 [A] KOG0329 ATP-dependent RNA helicase
Length = 428
Score = 172 bits (435), Expect = 2e-42
Identities = 122/381 (32%), Positives = 189/381 (49%), Gaps = 23/381 (6%)
Query: 148 EASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGS 207
+ G+ V S F L P LL I F P+ VQ +P G D++ A++G
Sbjct: 34 DVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGM 93
Query: 208 GKTGGFLFPVLSESFS-SGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFT 266
GKT F+ L + +G S +++ TRELA QI E ++F+
Sbjct: 94 GKTAVFVLATLQQLEPVTGQVSV----------------LVMCHTRELAFQISKEYERFS 137
Query: 267 -YRSWVKPMVVYGGASIDNQIKQMRYGC-NLLVATPGRLTDLLERRYISLANVKYLVLDE 324
Y VK V +GG SI + ++ C +++V TPGR+ L + ++L ++K+ +LDE
Sbjct: 138 KYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDE 197
Query: 325 ADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVG-R 383
D+ML+ + +RR V+ + +Q +MFSAT EI+ + F++D + + V
Sbjct: 198 CDKMLE---QLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDE 254
Query: 384 VGSTSENITQKILYVEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKA 443
T + Q + ++D +KN L DLL +IFV++ + +L L+ + F A
Sbjct: 255 TKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPA 314
Query: 444 TAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHR 503
AIH Q ER FK + ILVAT + RG+DI V N+D+P D D Y+HR
Sbjct: 315 IAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHR 374
Query: 504 IGRTGRAGNTGVATTFFNRGN 524
+ R GR G G+A TF + N
Sbjct: 375 VARAGRFGTKGLAITFVSDEN 395
>YMR290c [A] KOG0342 ATP-dependent RNA helicase pitchoune
Length = 505
Score = 171 bits (434), Expect = 2e-42
Identities = 125/377 (33%), Positives = 196/377 (51%), Gaps = 25/377 (6%)
Query: 143 DDIPVEASGNDVPEP-----ISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGR 197
D+ N PE + +F L L I+ FT T VQ ++P + AGR
Sbjct: 21 DEKSTSKQNNAAPEGEQTTCVEKFEELKLSQPTLKAIEKMGFTTMTSVQARTIPPLLAGR 80
Query: 198 DLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQ 257
D++ A+TGSGKT FL P + E S G +++ PTRELA Q
Sbjct: 81 DVLGAAKTGSGKTLAFLIPAI-ELLHSLKFKPRNGTG----------IIVITPTRELALQ 129
Query: 258 IYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLER-RYISLAN 316
I+ A++ +V GGA+ + +++ G N+L+ATPGRL D L+ + N
Sbjct: 130 IFGVARELMEFHSQTFGIVIGGANRRQEAEKLMKGVNMLIATPGRLLDHLQNTKGFVFKN 189
Query: 317 VKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDY 376
+K L++DEADR+L++GFE ++R+I++ +P+ D RQ+++FSAT ++++ LA L+
Sbjct: 190 LKALIIDEADRILEIGFEDEMRQIIK--ILPNED-RQSMLFSATQTTKVEDLARISLRPG 246
Query: 377 -VFLSV--GRVGSTSENITQKILYVEDFDKNDTLL-DLLAASNEGLTLIFVETKRAADSL 432
+F++V ST++ + Q + V D DK LL L + + ++F+ + +
Sbjct: 247 PLFINVVPETDNSTADGLEQGYV-VCDSDKRFLLLFSFLKRNQKKKIIVFLSSCNSVKYY 305
Query: 433 TDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFD 492
+ L +HG + Q +R F IL+ T VAARGLDIP V +I FD
Sbjct: 306 AELLNYIDLPVLELHGKQKQQKRTNTFFEFCNAERGILICTDVAARGLDIPAVDWIIQFD 365
Query: 493 LPNDIDDYVHRIGRTGR 509
P+D DY+HR+GRT R
Sbjct: 366 PPDDPRDYIHRVGRTAR 382
>ECU09g1640 [A] KOG0326 ATP-dependent RNA helicase
Length = 489
Score = 171 bits (432), Expect = 4e-42
Identities = 113/372 (30%), Positives = 191/372 (50%), Gaps = 20/372 (5%)
Query: 166 LDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSG 225
L P+LL I+ + P+PVQ S+P V G++L+ ++ G+GKT ++ P+L+ SS
Sbjct: 115 LGPVLLKRIRDIGYDFPSPVQVASIPHVLGGKNLLVRSKNGTGKTASYIVPMLNMINSS- 173
Query: 226 PASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQ 285
++ +IL P RELA QI K+ + + V V GG S+ +
Sbjct: 174 --------------ELSIQGIILVPIRELALQISRNVKRMSEGTGVISAPVVGGTSMQDD 219
Query: 286 IKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSD 345
I ++ G +++V TPGR+ DL+E+R +L+ LV DEAD++LD+ F + ++++
Sbjct: 220 IIRVSNGVHVMVGTPGRIVDLVEKRVGTLSKRVILVFDEADKLLDVTFGETVTKLLDL-- 277
Query: 346 MPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKND 405
+P +Q L++SATFP + ++K+ + +++ + + Q YV+ +K
Sbjct: 278 LPR--EKQMLLYSATFPYFVTGFIRRYMKNPLCINLMKE-LAPVGVKQFYTYVKPSEKLL 334
Query: 406 TLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTG 465
L LL + +IF + + + L + G + IH Q +R F G
Sbjct: 335 CLKSLLLRLSINQCVIFCNSIKTVELLAMKITEMGLPSYFIHSKMAQEDRNIVFHNFLKG 394
Query: 466 RATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNK 525
+ ILVAT + RG+D PN +VINFD+ + Y+HRIGR GR G GVA + K
Sbjct: 395 KCKILVATDLITRGVDAPNTNYVINFDISKSPESYLHRIGRAGRFGAPGVAISLVTTEEK 454
Query: 526 NVAKELVSLLSE 537
+ ++ + L +
Sbjct: 455 EMLMDIEAKLGK 466
>CE29051 [A] KOG0335 ATP-dependent RNA helicase
Length = 1016
Score = 171 bits (432), Expect = 4e-42
Identities = 123/362 (33%), Positives = 190/362 (51%), Gaps = 34/362 (9%)
Query: 128 EDKSFQSSGINFD--NYDDIPVEASGN-DVPEPISEFHSPPLDPLLLDNIKLARFTKPTP 184
+DK F+ + N D ++D V ++G ++P+ S L L DN+K + +PTP
Sbjct: 665 DDKMFEDAVNNDDKIDFDQKVVASTGKVEIPDMASFDGFKVLPQDLHDNLKRMKMNRPTP 724
Query: 185 VQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPV---LSESFSSGPASTPEAAGNSYIKKV 241
+Q+ S + G D++ACA TGSGKT FL P L E F T E K
Sbjct: 725 IQRASFFPIMHGDDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDE--------KP 776
Query: 242 YPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMR--YGCNLLVAT 299
P +I+APTREL Q + A++ TY + +K + +GG S + ++ +R N+LVAT
Sbjct: 777 SPRLLIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVAT 836
Query: 300 PGRLTDLLERRYISLANVKYLVLDEADRMLD-MGFEPQIRRIVEGSDMPSVDNRQTLMFS 358
GRL D + +SL+ +KY+VLDEADRM+D + F ++ +I+ GS P +QT++FS
Sbjct: 837 MGRLQDFVNAGEVSLSKMKYIVLDEADRMVDSIDFGEEVSKII-GS--PGERTQQTVLFS 893
Query: 359 ATFPSEIQ--HLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLL----- 411
A+F ++Q L + Y L V + G+ +E I QKIL V +K D + LL
Sbjct: 894 ASFSEDLQSDDLPKFVKEGYTMLQVDKFGTANEKIDQKILPVPRTEKRDAIYKLLGIDEN 953
Query: 412 -------AASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKT 464
A + TLIFV + + D+L + G ++H + Q +R+R L F+
Sbjct: 954 TVTLLPDAPIEKQKTLIFVNSVKFCDTLAALISSAGVSTISMHSYQNQEQRDRTLDDFRR 1013
Query: 465 GR 466
G+
Sbjct: 1014 GK 1015
>YDL084w [A] KOG0329 ATP-dependent RNA helicase
Length = 446
Score = 170 bits (431), Expect = 5e-42
Identities = 116/346 (33%), Positives = 175/346 (50%), Gaps = 23/346 (6%)
Query: 179 FTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYI 238
F P+ VQ++++P G D++ A++G GKT F+ L + P
Sbjct: 82 FEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQ-LDPVPGEV--------- 131
Query: 239 KKVYPTAVILAPTRELATQIYDEAKKFT-YRSWVKPMVVYGGASIDNQ---IKQMRYGCN 294
V++ RELA QI +E +F+ Y VK V YGG I +K +
Sbjct: 132 -----AVVVICNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTPISKDAELLKNKDTAPH 186
Query: 295 LLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQT 354
++VATPGRL L+ +YI L++VK V+DE D++L+ E +RR V+ + ++Q
Sbjct: 187 IVVATPGRLKALVREKYIDLSHVKNFVIDECDKVLE---ELDMRRDVQEIFRATPRDKQV 243
Query: 355 LMFSATFPSEIQHLASDFLKDYVFLSVGRVGS-TSENITQKILYVEDFDKNDTLLDLLAA 413
+MFSAT EI+ + FL++ + + V T + Q + +E+ +KN L LL
Sbjct: 244 MMFSATLSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYIKLEEREKNRKLAQLLDD 303
Query: 414 SNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVAT 473
+IFV++ A+ LT L F A +HG Q ER AFK I V+T
Sbjct: 304 LEFNQVIIFVKSTTRANELTKLLNASNFPAITVHGHMKQEERIARYKAFKDFEKRICVST 363
Query: 474 AVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTF 519
V RG+DI + IN+DL N+ D Y+HR+GR GR G G+A +F
Sbjct: 364 DVFGRGIDIERINLAINYDLTNEADQYLHRVGRAGRFGTKGLAISF 409
>SPBC4F6.07c [A] KOG0347 RNA helicase
Length = 648
Score = 170 bits (431), Expect = 5e-42
Identities = 118/403 (29%), Positives = 187/403 (46%), Gaps = 38/403 (9%)
Query: 138 NFDNYDDIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGR 197
N++ + + E N +S + L P +L ++ A F+KP P+Q +P + G
Sbjct: 101 NYNEFSTLEEEDEHNSHGVDVSAWAHFSLSPEMLGSLSKAGFSKPMPIQSLVIPEASIGF 160
Query: 198 DLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQ 257
D++ A TGSGKT F P+L + A Y A+++APTRELA Q
Sbjct: 161 DIIGKADTGSGKTLAFGIPILEHCLRNVDAK-------------YVQALVVAPTRELAHQ 207
Query: 258 IYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYIS--LA 315
I + ++ M + GG ++ Q + + +++VATPGRL ++ ++
Sbjct: 208 ICQHFELIKPSPNIRVMSITGGLAVQKQQRLLNKHPHVVVATPGRLWSVINENNLTGNFK 267
Query: 316 NVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKD 375
+K LVLDEADR+L ++ +++E P RQT +FSATF +Q +K
Sbjct: 268 KIKCLVLDEADRLLQKSHFEELSKLLEILGNPMHTQRQTFIFSATFDEGLQQRLKKNMKG 327
Query: 376 YV----------------------FLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAA 413
+ FL + + + + ++ +K D L L
Sbjct: 328 NITEKYNSPMENMLKEVRFFGKPKFLDANPQSAVASRVLEGLIECAPAEK-DLYLYYLIM 386
Query: 414 SNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVAT 473
G T++F +T FL + +H Q +R ++L FK +LV T
Sbjct: 387 RYPGKTMVFANGIEDIKRITPFLNELKVPSYPLHAQLDQKKRLQSLEKFKNNPKGVLVCT 446
Query: 474 AVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVA 516
VAARG+DIP+VTHVI++ +P+ D YVHR GRT RA GV+
Sbjct: 447 DVAARGIDIPSVTHVIHYHVPHTADMYVHRSGRTARANEDGVS 489
>7297629 [A] KOG0326 ATP-dependent RNA helicase
Length = 458
Score = 170 bits (431), Expect = 5e-42
Identities = 105/358 (29%), Positives = 184/358 (51%), Gaps = 20/358 (5%)
Query: 159 SEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVL 218
+EF L LL I + +P+P+Q+ ++PI +G+D++A A+ G+GKTG + PVL
Sbjct: 57 NEFEEFCLKRELLMGIFEKGWERPSPIQEAAIPIALSGKDVLARAKNGTGKTGAYCIPVL 116
Query: 219 SESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYG 278
+ + K Y A+++ PTRELA Q + ++ MV G
Sbjct: 117 EQIDPT---------------KDYIQALVMVPTRELALQTSQICIELAKHLDIRVMVTTG 161
Query: 279 GASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIR 338
G + + I ++ L++ATPGR+ DL++++ +++ + LVLDEAD++L + F+ +
Sbjct: 162 GTILKDDILRIYQKVQLIIATPGRILDLMDKKVADMSHCRILVLDEADKLLSLDFQGMLD 221
Query: 339 RIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYV 398
++ + + Q L+FSATFP +++ L++ +++ T + +TQ +V
Sbjct: 222 HVI----LKLPKDPQILLFSATFPLTVKNFMEKHLREPYEINLMEE-LTLKGVTQYYAFV 276
Query: 399 EDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERA 458
++ K L L + ++IF + + + L + G+ IH Q R R
Sbjct: 277 QERQKVHCLNTLFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHAKMAQAHRNRV 336
Query: 459 LSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVA 516
F+ G LV + + RG+D+ V VINFD P + Y+HRIGR+GR G+ G+A
Sbjct: 337 FHDFRQGLCRNLVCSDLFTRGIDVQAVNVVINFDFPRMAETYLHRIGRSGRFGHLGIA 394
>CE00839 [A] KOG0326 ATP-dependent RNA helicase
Length = 430
Score = 170 bits (430), Expect = 7e-42
Identities = 114/390 (29%), Positives = 189/390 (48%), Gaps = 32/390 (8%)
Query: 160 EFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLS 219
EF L LL I + KP+P+Q+ S+ + G+D++A A+ G+GKTG + PV
Sbjct: 44 EFEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPV-- 101
Query: 220 ESFSSGPASTPEAAGNSYIKKVYPT-----AVILAPTRELATQIYDEAKKFTYRSWVKPM 274
I+K+ P A+++ PTRELA Q + + +K M
Sbjct: 102 ------------------IEKIQPALKAIQAMVIVPTRELALQTSQICVELSKHIQLKVM 143
Query: 275 VVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFE 334
V GG + + I ++ +L++ATPGR+ DL+E+ + + K LVLDEAD++L F+
Sbjct: 144 VTTGGTDLRDDIMRLNGTVHLVIATPGRILDLMEKGVAKMEHCKTLVLDEADKLLSQDFQ 203
Query: 335 PQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFL-KDYVFLSVGRVGSTSENITQ 393
+ R++ + +P RQ +++SATFP+ + + K Y + + T +TQ
Sbjct: 204 GILDRLI--NFLPK--ERQVMLYSATFPNTVTSFMQKHMHKPYEINLMEEL--TLLGVTQ 257
Query: 394 KILYVEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQG 453
+V++ K L L ++IF + + + L + G+ IH Q
Sbjct: 258 YYAFVQEKQKVHCLNTLFRKLQINQSIIFCNSTQRVELLAKKITEIGYSCYYIHSKMAQN 317
Query: 454 ERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNT 513
R R F+ G LV + + RG+DI V VINFD P + + Y+HRIGR+GR G+
Sbjct: 318 HRNRVFHDFRQGNCRNLVCSDLLTRGIDIQAVNVVINFDFPRNAETYLHRIGRSGRFGHL 377
Query: 514 GVATTFFNRGNKNVAKELVSLLSEANQEVP 543
GVA +++ + + L + +P
Sbjct: 378 GVAINLITYEDRHTLRRIEQELRTRIEPIP 407
>7296990 [A] KOG0329 ATP-dependent RNA helicase
Length = 424
Score = 170 bits (430), Expect = 7e-42
Identities = 120/388 (30%), Positives = 193/388 (48%), Gaps = 20/388 (5%)
Query: 140 DNYDDIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDL 199
+N + + G V S F L P +L I F P+ VQ +P G D+
Sbjct: 22 ENQEAPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDI 81
Query: 200 MACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIY 259
+ A++G GKT F+ L + E + N+ +++ TRELA QI
Sbjct: 82 LCQAKSGMGKTAVFVLATLQQL---------EPSDNNTCH-----VLVMCHTRELAFQIS 127
Query: 260 DEAKKFT-YRSWVKPMVVYGGASIDNQIKQMRYGC-NLLVATPGRLTDLLERRYISLANV 317
E ++F+ Y VK V +GG +I + ++ G +++V TPGR+ L+ + ++L +
Sbjct: 128 KEYERFSKYMPTVKVAVFFGGMAIQKDEETLKSGTPHIVVGTPGRILALIRNKKLNLKLL 187
Query: 318 KYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYV 377
K+ VLDE D+ML+ + +RR V+ + +Q +MFSAT +I+ + F++D +
Sbjct: 188 KHFVLDECDKMLE---QLDMRRDVQEIFRSTPHGKQVMMFSATLSKDIRPVCKKFMQDPM 244
Query: 378 FLSVGRVGS-TSENITQKILYVEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFL 436
+ V T + Q + +++ +KN L +LL +IFV++ + +L+ L
Sbjct: 245 EVYVDDEAKLTLHGLQQHYVNLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCVALSQLL 304
Query: 437 IMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPND 496
+ F A IH TQ ER FK + ILVAT + RG+DI V V N+D+P D
Sbjct: 305 TEQNFPAIGIHRGMTQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPED 364
Query: 497 IDDYVHRIGRTGRAGNTGVATTFFNRGN 524
D Y+HR+ R GR G G+A TF + N
Sbjct: 365 SDTYLHRVARAGRFGTKGLAITFVSDEN 392
>At4g00660 [A] KOG0326 ATP-dependent RNA helicase
Length = 499
Score = 169 bits (429), Expect = 9e-42
Identities = 115/359 (32%), Positives = 177/359 (49%), Gaps = 28/359 (7%)
Query: 159 SEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVL 218
+EF L LL I F +P+P+Q+ S+PI GRD++A A+ G+GKT F PVL
Sbjct: 131 NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVL 190
Query: 219 SESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYG 278
+ V +L T ++ ++ K ++ MV G
Sbjct: 191 EKIDQDN--------------NVIQGNCVLDHTSQVCKELGKHLK-------IQVMVTTG 229
Query: 279 GASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIR 338
G S+ + I ++ +LLV TPGR+ DL ++ L + LV+DEAD++L F+P +
Sbjct: 230 GTSLKDDIMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVE 289
Query: 339 RIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKD-YVFLSVGRVGSTSENITQKILY 397
++ S +P ++RQ LMFSATFP ++ FL + YV + + T + ITQ +
Sbjct: 290 HLI--SFLP--ESRQILMFSATFPVTVKDFKDRFLTNPYVINLMDEL--TLKGITQFYAF 343
Query: 398 VEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERER 457
VE+ K L L + ++IF + + L + G+ IH Q R R
Sbjct: 344 VEERQKIHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNR 403
Query: 458 ALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVA 516
F+ G LV T + RG+DI V VINFD P + + Y+HR+GR+GR G+ G+A
Sbjct: 404 VFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLA 462
>SPBC776.09 [A] KOG0326 ATP-dependent RNA helicase
Length = 485
Score = 169 bits (428), Expect = 1e-41
Identities = 119/386 (30%), Positives = 186/386 (47%), Gaps = 22/386 (5%)
Query: 159 SEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVL 218
+EF L LL I A F +P+P+Q+ S+PI +GRD++A A+ G+GKT F+ P L
Sbjct: 44 TEFEDYYLKRELLMGIFEAGFERPSPIQEESIPIALSGRDILARAKNGTGKTAAFVIPSL 103
Query: 219 SESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYG 278
+ + KK +IL PTRELA Q K VK MV G
Sbjct: 104 EKVDT---------------KKSKIQTLILVPTRELALQTSQVCKTLGKHMNVKVMVTTG 148
Query: 279 GASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIR 338
G ++ + I ++ +++V TPGR+ DL + + V+DEAD++L F P I
Sbjct: 149 GTTLRDDIIRLNDTVHIVVGTPGRVLDLAGKGVADFSECTTFVMDEADKLLSPEFTPIIE 208
Query: 339 RIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFL-KDYVFLSVGRVGSTSENITQKILY 397
+++ S P NRQ ++SATFP +++ L K Y + + T +TQ +
Sbjct: 209 QLL--SYFPK--NRQISLYSATFPLIVKNFMDKHLNKPYEINLMDEL--TLRGVTQYYAF 262
Query: 398 VEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERER 457
V++ K L L + ++IF + + L + G+ H Q R R
Sbjct: 263 VDESQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMLQSHRNR 322
Query: 458 ALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVAT 517
F+ G LV + + RG+DI V VINFD P + + Y+HRIGR+GR G+ G+A
Sbjct: 323 VFHNFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHRGLAI 382
Query: 518 TFFNRGNKNVAKELVSLLSEANQEVP 543
+F + ++ + + L Q +P
Sbjct: 383 SFISWADRFNLYRIENELGTEIQPIP 408
>Hs13514831 [A] KOG0343 RNA Helicase
Length = 875
Score = 168 bits (425), Expect = 3e-41
Identities = 118/380 (31%), Positives = 186/380 (48%), Gaps = 21/380 (5%)
Query: 158 ISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPV 217
I+ F PL L ++ A++ T +QK ++ + G+D++ A+TGSGKT FL PV
Sbjct: 68 ITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPV 127
Query: 218 LSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVY 277
L + ST +I++PTRELA Q ++ +K ++
Sbjct: 128 LEALYRLQWTSTDGLG-----------VLIISPTRELAYQTFEVLRKVGKNHDFSAGLII 176
Query: 278 GGASIDNQIKQMRYGCNLLVATPGRLTDLLERRY-ISLANVKYLVLDEADRMLDMGFEPQ 336
GG + ++ +++ N+LV TPGRL ++ +++ LVLDEADR+LDMGF
Sbjct: 177 GGKDLKHEAERIN-NINILVCTPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADT 235
Query: 337 IRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLK--DYVFLSVGRVGSTSENITQK 394
+ ++E ++P RQTL+FSAT ++ LA LK +YV++ ST + Q
Sbjct: 236 MNAVIE--NLPK--KRQTLLFSATQTKSVKDLARLSLKNPEYVWVHEKAKYSTPATLEQN 291
Query: 395 ILYVEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFL--IMEGFKATAIHGDRTQ 452
+ E K L L + + +++F + + L + G A+HG + Q
Sbjct: 292 YIVCELQQKISVLYSFLRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQ 351
Query: 453 GERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGN 512
R + F RA +L AT +AARGLD P V V+ FD P D + Y+HR GRT R
Sbjct: 352 MRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKE 411
Query: 513 TGVATTFFNRGNKNVAKELV 532
G A K + ++L+
Sbjct: 412 DGEALLILLPSEKAMVQQLL 431
>CE25531 [J] KOG0328 Predicted ATP-dependent RNA helicase FAL1 involved in
rRNA maturation DEAD-box superfamily
Length = 508
Score = 167 bits (424), Expect = 3e-41
Identities = 120/359 (33%), Positives = 180/359 (49%), Gaps = 21/359 (5%)
Query: 141 NYDDIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLM 200
N D VE ++ I F L LL I F KP+ +Q+ ++P + RD++
Sbjct: 8 NDDMATVEFESSEEVSIIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVI 67
Query: 201 ACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYD 260
A AQ+G+GKT F VL +S + T A+IL+PTRELA QI
Sbjct: 68 AQAQSGTGKTATFSISVL-QSLDTQVRETQ--------------ALILSPTRELAVQIQK 112
Query: 261 EAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYL 320
V+ GG ++ I+++ YG +++ TPGR+ D++ RR + +K L
Sbjct: 113 VVLALGDYMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRAIKLL 172
Query: 321 VLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLS 380
VLDEAD ML+ GF+ Q+ I +P Q ++ SAT P EI + S F+ D + +
Sbjct: 173 VLDEADEMLNKGFKEQLYDIYRY--LPP--GAQVVLLSATLPHEILEMTSKFMTDPIRIL 228
Query: 381 VGRVGSTSENITQKILYVEDFD-KNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIME 439
V R T E I Q + V+ + K DTL+DL ++F T+R D LTD +
Sbjct: 229 VKRDELTLEGIKQFFVAVDREEWKFDTLIDLYDTLTITQAVLFCNTRRKVDWLTDKMKEA 288
Query: 440 GFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHV-INFDLPNDI 497
F +++HGD Q +R+ + F+ G +L++T V ARGLD+P V+ V F N I
Sbjct: 289 NFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSLVHFRFSAKNSI 347
Score = 53.1 bits (126), Expect = 1e-06
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 487 HVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFL 546
+VIN+DLPN+ + Y+HRIGR+GR G GVA F + + + +++ S E+P +
Sbjct: 445 YVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDVRILRDIEQYYSTQIDEMPMNI 504
Query: 547 TTIM 550
I+
Sbjct: 505 ADII 508
>7303950 [A] KOG0340 ATP-dependent RNA helicase
Length = 521
Score = 167 bits (424), Expect = 3e-41
Identities = 129/365 (35%), Positives = 183/365 (49%), Gaps = 33/365 (9%)
Query: 166 LDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSG 225
L P L+ + TP+Q+ +P + AG+D + A+TGSGKT F P+L E S
Sbjct: 14 LRPWLVKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAFALPIL-ERLSEE 72
Query: 226 PASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQ 285
P S A++L PT ELA QI ++ V+ VV GG +
Sbjct: 73 PVSH--------------FALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSGGTDQMVE 118
Query: 286 IKQMRYGCNLLVATPGRLTDLLER-RYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGS 344
+++ +++VA PGRL D L S N+KYLV+DEADRML+ F+ + I+E
Sbjct: 119 SQKLMQRPHIVVAMPGRLADHLTGCDTFSFDNLKYLVVDEADRMLNGDFDESLS-IIERC 177
Query: 345 DMPSVDNRQTLMFSATFP-----SEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVE 399
+P RQ L FSAT S I +ASD + S +T E + Q+ L
Sbjct: 178 -LPKT--RQNLFFSATMKDFIKESSIFPIASDCFE----WSQDSDVATVETLDQRYLLCA 230
Query: 400 DFDKNDTLLDLLAASNE----GLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGER 455
D+D++ L++ L E +IF TK+ L+ L +HG Q ER
Sbjct: 231 DYDRDMVLIEALRKYREENENANVMIFTNTKKYCQLLSMTLKNMEIDNVCLHGFMRQKER 290
Query: 456 ERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGV 515
ALS FK+ + L+AT VAARGLDIP+V V+N LP +Y+HR+GRT RAG G+
Sbjct: 291 VAALSRFKSNQIRTLIATDVAARGLDIPSVELVMNHMLPRTPKEYIHRVGRTARAGRKGM 350
Query: 516 ATTFF 520
+ + F
Sbjct: 351 SISIF 355
>YBR142w [A] KOG0347 RNA helicase
Length = 773
Score = 167 bits (422), Expect = 6e-41
Identities = 131/415 (31%), Positives = 189/415 (44%), Gaps = 75/415 (18%)
Query: 165 PLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSS 224
PL +L +++ F +PT +QK S+P++ G D+M A TGSGKT + P++ + S
Sbjct: 177 PLSMTILQSLQNLNFLRPTEIQKKSIPVIMQGVDVMGKASTGSGKTLAYGIPIVEKLIS- 235
Query: 225 GPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTY----RSWVKPMVVYGGA 280
N K P ++I PTRELA Q+ D KK +S + + GG
Sbjct: 236 ----------NFSQKNKKPISLIFTPTRELAHQVTDHLKKICEPVLAKSQYSILSLTGGL 285
Query: 281 SIDNQIKQMRYGCN--LLVATPGRLTDLLERRYISL---ANVKYLVLDEADRMLDMGFEP 335
SI Q + ++Y + +++ATPGR +LLE+ + + V L+LDEADR+L G
Sbjct: 286 SIQKQQRLLKYDNSGQIVIATPGRFLELLEKDNTLIKRFSKVNTLILDEADRLLQDGHFD 345
Query: 336 QIRRIVEGSDMPSVDNR----------QTLMFSATFPSE--------------------- 364
+ +I++ + NR QTL+FSATF +
Sbjct: 346 EFEKIIKHLLVERRKNRENSEGSSKIWQTLIFSATFSIDLFDKLSSSRQVKDRRFKNNED 405
Query: 365 -----IQHLASD--FLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNEG 417
IQHL S F V + S I + ++ ++ D G
Sbjct: 406 ELNAVIQHLMSKIHFNSKPVIIDTNPESKVSSQIKESLIECPPLER-DLYCYYFLTMFPG 464
Query: 418 LTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRA---------- 467
TLIF + LT +L G A IH TQ R ++L FK A
Sbjct: 465 TTLIFCNAIDSVKKLTVYLNNLGIPAFQIHSSMTQKNRLKSLERFKQQSAKQKTINHSNP 524
Query: 468 ------TILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVA 516
T+L+A+ VAARGLDIP V HVI++ LP D Y+HR GRT RAG+ GV+
Sbjct: 525 DSVQLSTVLIASDVAARGLDIPGVQHVIHYHLPRSTDIYIHRSGRTARAGSEGVS 579
>SPAC1093.05 [A] KOG0343 RNA Helicase
Length = 735
Score = 167 bits (422), Expect = 6e-41
Identities = 118/383 (30%), Positives = 182/383 (46%), Gaps = 21/383 (5%)
Query: 156 EPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLF 215
E + F PL +K A F T +QK +P GRD++ A+TGSGKT F+
Sbjct: 36 ETVDHFAELPLTQPTKSALKNAHFITLTEIQKQCIPSALKGRDILGAAKTGSGKTLAFIV 95
Query: 216 PVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMV 275
P++ + S A++++PTRELA Q ++ K +
Sbjct: 96 PLIENLYRKKWTSLDGLG-----------ALVISPTRELAIQTFETLVKIGRLHSFSAGL 144
Query: 276 VYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRY-ISLANVKYLVLDEADRMLDMGFE 334
+ GG + + K+ N+LV TPGRL +++ + ++ L+LDEADR+LDMGF
Sbjct: 145 IIGGNNYKEE-KERLSRMNILVCTPGRLLQHIDQAVNFDTSGLQMLILDEADRILDMGFR 203
Query: 335 PQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGR--VGSTSENIT 392
+ IV S +P +RQT++FSAT ++ LA L++ F+SV ST N+
Sbjct: 204 TTLDAIV--SSLPV--HRQTMLFSATQTKSVKDLARLSLQNPDFISVHENDTSSTPSNLN 259
Query: 393 QKILYVEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFL--IMEGFKATAIHGDR 450
Q L V +K D L + + T++F+ + + + + + G +HG +
Sbjct: 260 QFYLTVPLTEKLDILFGFIRTHLKFKTIVFLSSCKQVRFVYETFRRMRPGISLLHLHGKQ 319
Query: 451 TQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRA 510
Q R + F + R +L T + ARGLD P V VI D P D+D Y+HR+GRT R
Sbjct: 320 KQTTRTEVTAKFTSSRHVVLFCTDIVARGLDFPAVDWVIQLDAPEDVDTYIHRVGRTARY 379
Query: 511 GNTGVATTFFNRGNKNVAKELVS 533
+G A + K L S
Sbjct: 380 NRSGNALLLLLPSEEAFLKRLES 402
>SPAC17G6.14c [A] KOG0329 ATP-dependent RNA helicase
Length = 434
Score = 165 bits (418), Expect = 2e-40
Identities = 119/360 (33%), Positives = 182/360 (50%), Gaps = 25/360 (6%)
Query: 166 LDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFS-S 224
L P LL I + F P+ VQ+ +P G D++ A++G GKT F+ L +
Sbjct: 58 LKPELLRAITDSGFEHPSEVQQVCIPQSILGTDVLCQAKSGMGKTAVFVLSTLQQIEPVD 117
Query: 225 GPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFT-YRSWVKPMVVYGGASID 283
G S ++L TRELA QI +E +F+ Y V+ V YGG +I
Sbjct: 118 GEVSV----------------LVLCHTRELAFQIKNEYARFSKYLPDVRTAVFYGGINIK 161
Query: 284 NQI---KQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRI 340
+ K +++VATPGRL L+ + + + +VK+ VLDE D++L+ +RR
Sbjct: 162 QDMEAFKDKSKSPHIVVATPGRLNALVREKILKVNSVKHFVLDECDKLLE---SVDMRRD 218
Query: 341 VEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVG-RVGSTSENITQKILYVE 399
++ + +Q +MFSAT +EI+ + F+++ + + V T + Q + +E
Sbjct: 219 IQEVFRATPPQKQVMMFSATLSNEIRPICKKFMQNPLEIYVDDETKLTLHGLQQHYVKLE 278
Query: 400 DFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERAL 459
+ KN + DLL + +IFV++ A+ L L F + IHG Q ER +
Sbjct: 279 EKAKNRKINDLLDSLEFNQVVIFVKSVSRANELDRLLRECNFPSICIHGGLPQEERIKRY 338
Query: 460 SAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTF 519
AFK I VAT V RG+DI V VIN+D+P+ D Y+HR+GR GR G G+A TF
Sbjct: 339 KAFKDFDKRICVATDVFGRGIDIERVNIVINYDMPDSPDSYLHRVGRAGRFGTKGLAITF 398
>Hs17474878 [A] KOG0333 U5 snRNP-like RNA helicase subunit
Length = 645
Score = 165 bits (417), Expect = 2e-40
Identities = 99/265 (37%), Positives = 146/265 (54%), Gaps = 17/265 (6%)
Query: 274 MVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGF 333
+ V GG S ++ ++ GC +++ATPG L D+LE RY+ L+ Y+VLDEADRM+D+GF
Sbjct: 364 VAVIGGISREDWGFRLLMGCEIVIATPGHLIDVLENRYLVLSCCTYVVLDEADRMIDVGF 423
Query: 334 EPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQ 393
EP +++I+E MP SE +H S+ + + E + Q
Sbjct: 424 EPDVQKILE--HMPQ--------------SEARHDESEDPEKMLANFESGKRKPHERVEQ 467
Query: 394 KILYVEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQG 453
L E +K LL++L + IFV K+ D L L G+ A +HG + Q
Sbjct: 468 VFLMSES-EKRKKLLEILKQGFDPAITIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQE 526
Query: 454 ERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNT 513
+RE ALS K G +LV T VA G+DI +V+ V+N+D+ +IDDY+HRIGR G+AG +
Sbjct: 527 QREFALSNLKPGAKDVLVTTDVAGHGIDIQDVSMVVNYDMAKNIDDYIHRIGRMGQAGKS 586
Query: 514 GVATTFFNRGNKNVAKELVSLLSEA 538
GVA TF + + V EL + E+
Sbjct: 587 GVAITFLTKEDSAVFYELKQAILES 611
>7290730 [A] KOG0331 ATP-dependent RNA helicase
Length = 438
Score = 164 bits (414), Expect = 5e-40
Identities = 118/412 (28%), Positives = 195/412 (46%), Gaps = 31/412 (7%)
Query: 153 DVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGG 212
++PEP+ F + +L ++ + PTP+Q + I G++++ + G+GKT G
Sbjct: 26 NLPEPVLSFERSGFNATILQQLEDQGYDGPTPIQAQTWSIAKEGKNIVMISGKGTGKTLG 85
Query: 213 FLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVK 272
+L P + + + G KK P +IL RE A + E +T
Sbjct: 86 YLLPGIMKMHNQ--------RGLMQHKKG-PIVLILVDCREAAVMVQREVLYYT-----N 131
Query: 273 PMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERR--YISLANVKYLVLDEADRMLD 330
P+ + + N Q C+LLVA+ GRL +++ + + L YLVLD DRM+D
Sbjct: 132 PLELRTHCLLGNSQWQGHAECDLLVASAGRLLQMIDNKKHVVELERCTYLVLDNIDRMID 191
Query: 331 MGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRV---GST 387
+G E I R++ + Q ++ S ++ S ++ +A+ FL Y + VG + G
Sbjct: 192 VGLEGNICRLL----CRLRPHAQLIVSSTSWSSNLKRMANKFLGQYTAIRVGEINNIGVR 247
Query: 388 SENITQKILYVEDFDKNDTLLDLLAASNE-----GLTLIFVETKRAADSLTDFLIMEGFK 442
+NI Q++ V K + L+ L A + G +I+V+ ++ + L D LI
Sbjct: 248 LQNIRQRVEVVNGLSKVERLMKELTAIYDTSDIPGKVVIYVKRQKVVEELVD-LIRNCVP 306
Query: 443 ATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVH 502
IHG RT E + + F TG I+VAT + + LD+P + +VIN+D P++ID YV
Sbjct: 307 CEGIHGGRTAQENQGIIHDFGTGAYNIIVATQMTSNCLDVPGIRYVINYDFPDNIDKYVQ 366
Query: 503 RIGRTG--RAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFLTTIMRE 552
R+ RTG +FF N + E+V L QE+ L + E
Sbjct: 367 RMSRTGCLSYNRNCEVISFFTMANYKLVTEVVDFLKICKQEIGPHLLQLAEE 418
>Hs14251212 [K] KOG4284 DEAD box protein
Length = 824
Score = 161 bits (408), Expect = 2e-39
Identities = 108/376 (28%), Positives = 188/376 (49%), Gaps = 28/376 (7%)
Query: 159 SEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVL 218
++F S L +L+ ++ A F +P+PVQ ++P+ G DL+ A++G+GKT F
Sbjct: 62 ADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVF----- 116
Query: 219 SESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYG 278
+ A + ++ + +ILAPTRE+A QI+ + V+
Sbjct: 117 ----------STIALDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFI 166
Query: 279 GASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMG-FEPQI 337
G + +Q K C++ V +PGR+ L+E Y++ +++ +LDEAD++L+ G F+ QI
Sbjct: 167 GGTPLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQI 226
Query: 338 RRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILY 397
I S +P+ ++Q L SAT+P + + + +++D F+ + + + Q
Sbjct: 227 NWIY--SSLPA--SKQMLAVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKV 282
Query: 398 VEDF--------DKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGD 449
V + +K L +L + L+F A L D L +GF A I G+
Sbjct: 283 VNSYPLAHKVFEEKTQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGN 342
Query: 450 RTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGR 509
Q +R A++ K +L++T + +RG+D V V+N D+P D + Y+HRIGR GR
Sbjct: 343 MNQNQRLDAMAKLKHFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGR 402
Query: 510 AGNTGVATTFFNRGNK 525
G G+ T+ RG +
Sbjct: 403 FGTLGLTVTYCCRGEE 418
>SPBC691.04 [A] KOG0342 ATP-dependent RNA helicase pitchoune
Length = 535
Score = 161 bits (407), Expect = 3e-39
Identities = 122/360 (33%), Positives = 185/360 (50%), Gaps = 32/360 (8%)
Query: 172 DNIKLARFTKPTPVQKYSVPIVAAGRD-LMACAQTGSGKTGGFLFPVLSESFSSGPASTP 230
+++ A F K TPVQ+ + V + + A+TG+GKT FL + P
Sbjct: 51 NSLSRAGFEKMTPVQQRVLNEVFPNEENAVVQAKTGTGKTLAFLLVAFKDVLKGKPRLNS 110
Query: 231 EAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMR 290
K++ +VIL+PTRELA QI++EA+K TY + ++ GG S + +R
Sbjct: 111 S--------KIH--SVILSPTRELALQIFEEARKLTYGTGIRVSYAIGGNSKMREENAIR 160
Query: 291 YG-CNLLVATPGRLTDLLER-RYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPS 348
G NLL+ATPGRL D L+ R + + +LDEADR++DMGF I I E +
Sbjct: 161 RGNANLLIATPGRLEDHLQNPRILESLSTDSFILDEADRLMDMGFAESILNIHEAV---T 217
Query: 349 VDNRQTLMFSATFPSEIQHLASDFL-KDYVFLSV--GRVGSTSENITQKILYVE---DFD 402
+ L FSAT P ++ ++ L D+ ++ T E + Q ++ + F
Sbjct: 218 TTKTRKLCFSATMPPKVSNVFRGILGTDFKLINCLDPNEPPTHERVPQFVIETKLDKVFS 277
Query: 403 KNDTLLDLLAASNEGLTLI-FVETKRAADSLTDFL--IMEG---FKATAIHGDRTQGERE 456
+ +LL L +SN +I F+ T S+ DF+ ++E +H T +R
Sbjct: 278 SSLSLLQQLTSSNPSSRIIVFLPTI----SMVDFVGGVLENHLKIPCFILHSGLTTAQRR 333
Query: 457 RALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVA 516
+F+ ++ IL AT V ARG+D PN+T V+ P++ DDY+HRIGRTGRAG TG A
Sbjct: 334 SITESFRKCQSGILFATDVVARGMDFPNITQVVQITGPSNTDDYIHRIGRTGRAGKTGEA 393
>SPBC12C2.06 [A] KOG0332 ATP-dependent RNA helicase
Length = 503
Score = 161 bits (407), Expect = 3e-39
Identities = 121/390 (31%), Positives = 191/390 (48%), Gaps = 47/390 (12%)
Query: 147 VEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAG--RDLMACAQ 204
++A N + F L P LL I +F KP+ +Q+ ++P++ + R+++ +Q
Sbjct: 102 LQADPNSPLFSVKSFEELELKPELLKGIYSMKFQKPSKIQEKALPLLLSNPPRNMIGQSQ 161
Query: 205 TGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKK 264
+G+GKT F +LS +S P P A+ LAP+RELA QI D +
Sbjct: 162 SGTGKTAAFALTMLSRVDASVPK---------------PQAICLAPSRELARQIMDVVTE 206
Query: 265 FTYRSWVKPMV-----VYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKY 319
+ VK V GA ID QI ++ TPG + DL++RR + ++K
Sbjct: 207 MGKYTEVKTAFGIKDSVPKGAKIDAQI---------VIGTPGTVMDLMKRRQLDARDIKV 257
Query: 320 LVLDEADRMLDM-GFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVF 378
VLDEAD MLD G Q RI +P N Q ++FSATF ++ A F +
Sbjct: 258 FVLDEADNMLDQQGLGDQSMRIKHL--LPR--NTQIVLFSATFSERVEKYAERFAPNANE 313
Query: 379 LSVGRVGSTSENITQKILYVE---DFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDF 435
+ + + E I Q LY++ + K + L++L G ++IF + K A+ +
Sbjct: 314 IRLKTEELSVEGIKQ--LYMDCQSEEHKYNVLVELYGLLTIGQSIIFCKKKDTAEEIARR 371
Query: 436 LIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLP- 494
+ +G + G+ +R+ + +F+ G + +LV T V ARG+D+ V V+N+D+P
Sbjct: 372 MTADGHTVACLTGNLEGAQRDAIMDSFRVGTSKVLVTTNVIARGIDVSQVNLVVNYDMPL 431
Query: 495 -----NDIDDYVHRIGRTGRAGNTGVATTF 519
D Y+HRIGRTGR G GV+ F
Sbjct: 432 DQAGRPDPQTYLHRIGRTGRFGRVGVSINF 461
>7299006 [A] KOG0345 ATP-dependent RNA helicase
Length = 613
Score = 160 bits (404), Expect = 7e-39
Identities = 132/409 (32%), Positives = 208/409 (50%), Gaps = 41/409 (10%)
Query: 159 SEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVL 218
S PPL +L ++ F + TPVQ ++P++ A +D+ A A TGSGKT FL P+L
Sbjct: 7 SSLDKPPLSDAVLQVVQSFGFQQMTPVQTAAIPLLLARKDVSAEAVTGSGKTLAFLVPML 66
Query: 219 SESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPM---V 275
E TP K++ A++++PTRELA QI + +F ++ + +
Sbjct: 67 -EILQRRHKETPWGP-----KEI--GALVISPTRELARQISEVLAQFLEHEDLEHLNQQL 118
Query: 276 VYGGASIDNQIKQMRYGCN-LLVATPGRLTDLLERRYISL------ANVKYLVLDEADRM 328
+ GG SI+ I +R +LV TPGRL DL +R+ L ++++LVLDEADR+
Sbjct: 119 IVGGNSIEEDIATLRRETPCILVCTPGRLEDLFQRKGDDLNLAAQVKSLEFLVLDEADRL 178
Query: 329 LDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTS 388
LD+GF+ + I+ +P R+T +FSAT +E+ L L++ V +SV S +
Sbjct: 179 LDLGFKTSVNNIL--GYLPR--QRRTGLFSATQTTEVTDLIRAGLRNPVLVSVKEKASVN 234
Query: 389 ENITQKILY--VEDFDKNDTLLDLLA--ASNEGLTLIFVETKRAADSLTDFL--IMEGFK 442
+ Y VE K LL+ L+ A+ G ++F T + + L ++
Sbjct: 235 TPARLQNFYRIVEPELKFVALLEFLSSPATVIGKVMVFFPTCACVEYWAEALPPLLPKRT 294
Query: 443 ATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVH 502
IHG + + +R + F+ +L+ T V ARGLD+P + V+ +D P+ +VH
Sbjct: 295 VLGIHG-KMKNKRANVVEKFRNTPQAVLLCTDVLARGLDVPEIEWVVQWDPPSTASSFVH 353
Query: 503 RIGRTGRAGNTGVATTF----------FNRGNKNVAKELVSLLSEANQE 541
R+GRT R GN G A F F + N+ V EL LL+E ++
Sbjct: 354 RVGRTARQGNEGNALVFLLPSEDAYVHFLKINQKV--ELTKLLTEEAED 400
>SPBC24C6.02 [A] KOG0345 ATP-dependent RNA helicase
Length = 606
Score = 159 bits (402), Expect = 1e-38
Identities = 119/391 (30%), Positives = 188/391 (47%), Gaps = 37/391 (9%)
Query: 161 FHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSE 220
F S +D L + + F K TPVQ ++P+ +DL+ A TGSGKT +L P +
Sbjct: 3 FQSINIDKWLKNAVAAQGFKKMTPVQANAIPLFLKNKDLVVEAVTGSGKTLAYLLPCFDK 62
Query: 221 SFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTY---------RSWV 271
T A +I+APTRELATQI++ K+ + V
Sbjct: 63 VTRRDTDETGLGA------------LIVAPTRELATQIFNVTKELLAYQPDSLDGGKKLV 110
Query: 272 KPMVVYGGASIDNQIKQMRY-GCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLD 330
M + G ++ N + R ++++ TPGRL ++L +IS +++ L+LDEAD ++D
Sbjct: 111 ADMYIGGKGTLTNDLASFREKNPSVVIGTPGRLNEMLS--HISSKHLEILILDEADTLID 168
Query: 331 MGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQH-LASDFLKDYVFLSVGRVGS--- 386
MGF+ ++ I+ S +P R+T +FSAT + L L++ V +SV
Sbjct: 169 MGFQRTLQSII--SQLPK--QRRTGLFSATMNDTVSSFLKIAGLRNSVRVSVTVTSKKID 224
Query: 387 --TSENITQKILYVEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEG--FK 442
T ++ + L + K ++ LL ++F + + + + F+
Sbjct: 225 TRTPSSLAIQSLVIPPIYKVQCMIHLLCTIEYEKAIVFFSSCASVEYFNSLFLTYKLPFE 284
Query: 443 ATAIHGDRTQGERERALSAFK-TGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYV 501
A+HG + Q R R FK + + T+L T +A+RGLDIPNV V+ D P D +
Sbjct: 285 IVALHGQQVQSNRSRNFEKFKKSNKKTVLFTTDIASRGLDIPNVDFVLQLDPPLDPKSFS 344
Query: 502 HRIGRTGRAGNTGVATTFFNRGNKNVAKELV 532
HR GR GRAG GVA N G + +EL+
Sbjct: 345 HRCGRAGRAGRAGVAIVLLNDGREEEYEELL 375
>Hs13787206 [A] KOG0342 ATP-dependent RNA helicase pitchoune
Length = 670
Score = 159 bits (402), Expect = 1e-38
Identities = 112/346 (32%), Positives = 177/346 (50%), Gaps = 19/346 (5%)
Query: 171 LDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTP 230
L IK FT T +Q S+ + GRDL+A A+TGSGKT FL P + E T
Sbjct: 191 LKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAV-ELIVKLRFMTR 249
Query: 231 EAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMR 290
G +IL+PTRELA Q + K+ ++ GG++ + +++
Sbjct: 250 NGTG----------VLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEAQKLG 299
Query: 291 YGCNLLVATPGRLTDLLERRY-ISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSV 349
G N++VATPGRL D ++ N++ LV+DEADR+LD+GFE ++++I++ +P+
Sbjct: 300 NGINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKL--LPT- 356
Query: 350 DNRQTLMFSATFPSEIQHLASDFLKD---YVFLSVGRVGSTSENITQKILYVEDFDKNDT 406
RQT++FSAT +++ LA LK YV + + +T + + Q + +
Sbjct: 357 -RRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLL 415
Query: 407 LLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGR 466
L L + + ++F + + + L AIHG + Q +R F
Sbjct: 416 LFTFLKKNRKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNAD 475
Query: 467 ATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGN 512
+ L+ T VAARGLDIP V ++ +D P+D +Y+HR+GRT R N
Sbjct: 476 SGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLN 521
>CE23814 [A] KOG0340 ATP-dependent RNA helicase
Length = 696
Score = 159 bits (402), Expect = 1e-38
Identities = 124/398 (31%), Positives = 201/398 (50%), Gaps = 37/398 (9%)
Query: 161 FHSPPLDPLLLDNIKLARFTKPTPVQKYSVPI------VAAGRDLMACAQTGSGKTGGFL 214
F ++ LL N K+ +F P + K+S I + + CA+TG+GKT F
Sbjct: 144 FPKKKIEKLLKFNDKILKF--PLKINKFSRKIRFFYRKIKKTTEEKCCARTGTGKTLAFA 201
Query: 215 FPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPM 274
P+L + S P +Y A+IL PTRELA QI ++ +K
Sbjct: 202 IPIL-QKLSVDPYG------------IY--ALILTPTRELAFQIAEQFTALGKPITLKCS 246
Query: 275 VVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANV----KYLVLDEADRMLD 330
V+ GG S+ +Q +++ +++VATPGRL DL+E ++A V ++ VLDEADRML+
Sbjct: 247 VIVGGRSLIHQARELSERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLE 306
Query: 331 MGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLAS-DFLKDYVFLSVGRVG-STS 388
+ Q++ I E + RQTL+ SAT + I L K Y F G+ ST
Sbjct: 307 GQYNDQLKPIFESIS----EKRQTLLLSATITNNINMLHRVSTRKPYFFEDKGKDDESTV 362
Query: 389 ENITQKILYVEDFDKNDTLLDLLAASNE----GLTLIFVETKRAADSLTDFLIMEGFKAT 444
+ + QK + K+ L+ ++ +E +IF +T R +L GF+
Sbjct: 363 DRLEQKYVVCPVAVKDAYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAYMFEGLGFRVG 422
Query: 445 AIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRI 504
++H Q +R ALSAF++ +++ T VA+RGLDIP+V V+N ++P Y+HR+
Sbjct: 423 SLHSQIPQKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRV 482
Query: 505 GRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEV 542
GR+ RAG G A +F + + + + + ++ + E+
Sbjct: 483 GRSARAGRFGSALSFVTQYDVELLQAVEQVIGKKLDEL 520
>At4g16630 [A] KOG0338 ATP-dependent RNA helicase
Length = 683
Score = 159 bits (402), Expect = 1e-38
Identities = 123/370 (33%), Positives = 178/370 (47%), Gaps = 42/370 (11%)
Query: 179 FTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYI 238
+ KPTP+Q +P RDL A A TGSGK L + + + A +
Sbjct: 187 YKKPTPIQVQFIP--QEWRDLCASAITGSGKVSTRLMVLCNTEILFRYLTNTAAFALPTL 244
Query: 239 -------KKVYPTAV-ILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMR 290
K+V+ T V IL PTRELA QI+ + + +K ++ GG S+ Q +R
Sbjct: 245 ERLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLR 304
Query: 291 YGCNLLVATPGRLTDLLERRY-ISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSV 349
+++VATPGR+ D L + L ++ L+LDEADR+L GF +I +V
Sbjct: 305 SMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPK--- 361
Query: 350 DNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLD 409
RQT++FSAT E++ L L + LS +T++ Y+ +F
Sbjct: 362 -RRQTMLFSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEE--YLREF-------- 410
Query: 410 LLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERER----------AL 459
+ + G TK+AA L + G KA +HG+ TQ +R +L
Sbjct: 411 FVPSCASG-------TKQAAHRLKILFGLAGLKAAELHGNLTQAQRLDVRNLGTSALFSL 463
Query: 460 SAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTF 519
F+ L+AT VAARGLDI V VIN+ P +ID YVHR+GRT RAG G A TF
Sbjct: 464 ELFRKQEVDFLIATDVAARGLDIIGVQTVINYACPREIDSYVHRVGRTARAGREGYAVTF 523
Query: 520 FNRGNKNVAK 529
++++ K
Sbjct: 524 VTDSDRSLLK 533
>ECU10g0690 [A] KOG0345 ATP-dependent RNA helicase
Length = 463
Score = 159 bits (401), Expect = 2e-38
Identities = 113/342 (33%), Positives = 174/342 (50%), Gaps = 27/342 (7%)
Query: 179 FTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYI 238
F K T VQ +P V G+D++ + TG+GKT FL P+LS + P
Sbjct: 24 FGKMTEVQLKCIPEVLKGKDVVVQSPTGTGKTMAFLAPILSCIYDGKGRGRPGV------ 77
Query: 239 KKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVA 298
TAV++ PTRELA QI + A F VK GG SI+ K+M+ ++ V
Sbjct: 78 -----TAVVITPTRELALQIREVAGLFD----VKCECFIGGMSIEEDYKRMKEEFSIAVG 128
Query: 299 TPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFS 358
TPGRL +++ + +++ +LVLDEAD++L GFE ++ +++ + +P NR T +FS
Sbjct: 129 TPGRLLEIVGKETKKFSSLSHLVLDEADKLLGFGFEEKLMQLL--AKLPR--NRVTGLFS 184
Query: 359 ATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNEGL 418
AT + L+ FL++ V ++ VG+ + + + V +K L+D++
Sbjct: 185 ATRNDSVDKLSRVFLRNPVSIN---VGNNEMPVALEYIVVSPMEKLLVLMDIVTGRR--- 238
Query: 419 TLIFVETKRAADSLTDFLIMEGF-KATAIHGDRTQGERERALSAFKTGRATILVATAVAA 477
++F T D + + GF IHG +Q ER R F R +L T VAA
Sbjct: 239 CIVFFATCSEVDFFSGLVSRAGFGNICKIHGKISQDERNRVYEEF-FQRDGLLFCTDVAA 297
Query: 478 RGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTF 519
RG+D V V++FD+P + VHR GRT R G+ G + F
Sbjct: 298 RGIDFRGVDLVVHFDVPKEYSSIVHRSGRTARNGSKGESVLF 339
>7293369 [A] KOG0343 RNA Helicase
Length = 805
Score = 159 bits (401), Expect = 2e-38
Identities = 120/378 (31%), Positives = 179/378 (46%), Gaps = 37/378 (9%)
Query: 158 ISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPV 217
I +F PL + ++F PT VQ+ S+ G+D++ A TGSGKT FL PV
Sbjct: 71 IKKFAQFPLSKKTQKALAESKFVHPTQVQRDSIGPALQGKDVLGAAITGSGKTLAFLIPV 130
Query: 218 LSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVY 277
L F + + T A+I++PTRELA QI++ KK ++
Sbjct: 131 LEHLFMNKWSRTDGVG-----------AIIISPTRELAYQIFETLKKVGKHHDFSAGLII 179
Query: 278 GGASIDNQIKQMRYGCNLLVATPGRLTDLL-ERRYISLANVKYLVLDEADRMLDMGFEPQ 336
GG ++ + +M CN+L+ TPGRL + E + + ++ LVLDEADR LDMGF+
Sbjct: 180 GGKNLKFERTRMDQ-CNILICTPGRLLQHMDENPLFNTSTMEMLVLDEADRCLDMGFQKT 238
Query: 337 IRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRV-------GSTSE 389
+ I+E + P V RQTL+FSAT + +Q LA LKD V++ G ST +
Sbjct: 239 LNSIIE--NFPPV--RQTLLFSATQTNTVQDLARLNLKDPVYVGYGGATPREEPSASTKK 294
Query: 390 NITQKILYVEDF-----------DKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFL-- 436
+L V + DK L + + ++FV + + A L +
Sbjct: 295 TPNTAVLAVPELLQQSYVVLNLEDKITMLWSFIKNHLKQKIIVFVASCKQAKYLYEIFCK 354
Query: 437 IMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPND 496
+ G A++G Q R F ++ +T VA+RGLD P V V+ D P D
Sbjct: 355 LRPGSPLLALYGTLHQDRRIAIYEDFLRKSHVVMFSTDVASRGLDFPAVNWVVQLDCPED 414
Query: 497 IDDYVHRIGRTGRAGNTG 514
+ Y+HR GR+ R G
Sbjct: 415 VSQYIHRAGRSARNKTRG 432
>SPBC21H7.04 [A] KOG0348 ATP-dependent RNA helicase
Length = 709
Score = 157 bits (398), Expect = 4e-38
Identities = 131/448 (29%), Positives = 199/448 (44%), Gaps = 69/448 (15%)
Query: 133 QSSGINFDN--YDDIPVEASGNDVPEPISEFHSPPLDPLLLDNIK-LARFTKPTPVQKYS 189
Q G N ++ +I ++ P + F LD L D++ + PT +Q
Sbjct: 110 QDVGQNLEDNQISNIGTTKEASNAPIKTTNFAGVQLDTQLADHLNNKMNISAPTAIQSCC 169
Query: 190 VPIV--AAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVI 247
+P + +D AQTGSGKT +L P++ +G +Y AVI
Sbjct: 170 LPALLNTDDKDAFIEAQTGSGKTLAYLLPIVQRLIRLPKNLHTRTSG------IY--AVI 221
Query: 248 LAPTRELATQIYDEAKKFTYRS---WVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLT 304
+APTREL QIY+ A K W+ V GG ++ ++R G N+L+ TPGRL
Sbjct: 222 MAPTRELCQQIYNVANKLNNNPLSHWIVSCNVIGGEKKKSEKARIRKGVNILIGTPGRLA 281
Query: 305 DLLER-RYISLANVKYLVLDEADRMLDMGFEPQIRRIVE---------GSDMPSVDNRQT 354
D LE + ++ V+++VLDE DR++DMGFE + +I+ D+ + T
Sbjct: 282 DHLENTEALDVSQVRWVVLDEGDRLMDMGFEETLTKILSYLESQSSIIKKDLSIPSRKVT 341
Query: 355 LMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTS-------ENITQKILYVEDFDKNDTL 407
++ SAT ++ L+ LKD ++L V T+ E + Q+ + V + +L
Sbjct: 342 MLCSATMKDTVKRLSDSALKDALYLKSSIVEETNDGYSQAPEQLLQRYVVVPPKLRLVSL 401
Query: 408 LDLLAASNEGLTLIFV--------------------------ETKRAADSLTDFL----- 436
+ LL + I + K DS D +
Sbjct: 402 VALLRSHVRSYKKIIIFLSCSDSVDFHFEAFRCAINADEMEEAVKEKPDSEGDIISNAPA 461
Query: 437 --IMEGFKATAIHGDRTQGERERALSAFKTGR---ATILVATAVAARGLDIPNVTHVINF 491
I +HG +Q R L+ F + + IL+ T VAARGLD+PNV V+ +
Sbjct: 462 LRIDGKSNVYRLHGSLSQQIRTSTLNLFSSSEDSGSHILLCTDVAARGLDLPNVDLVVQY 521
Query: 492 DLPNDIDDYVHRIGRTGRAGNTGVATTF 519
D P DDY+HRIGRT RAG+ G A F
Sbjct: 522 DAPFSTDDYLHRIGRTARAGHNGAAIMF 549
>At3g16840 [A] KOG0347 RNA helicase
Length = 833
Score = 157 bits (396), Expect = 6e-38
Identities = 128/480 (26%), Positives = 214/480 (43%), Gaps = 75/480 (15%)
Query: 134 SSGINFDNYDDIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIV 193
S+ ++ D D + + ++P S + S L PLL+ +I F +PT +QK +
Sbjct: 166 SAAVSCDGDDTVEEQVEEEEIPPEFSAWSSMRLHPLLMKSIYRLDFKEPTKIQKACFNVA 225
Query: 194 A-AGRDLMACAQTGSGKTGGFLFPVLS------ESFSSGPASTPEAAGNSYIKKVYPTAV 246
A G+D++ A+TGSGKT F P+L E A E A Y Y A+
Sbjct: 226 AYQGKDVIGAAETGSGKTLAFGLPILQRLLDEREKVGKLYALKGEEA-QKYAADGYLRAL 284
Query: 247 ILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDL 306
I+ PTRELA Q+ + + VK + + GG + Q ++++ ++VATPGRL +L
Sbjct: 285 IITPTRELALQVTEHLENAAKNLSVKVVPIVGGMFSEKQERRLKEKPEIVVATPGRLWEL 344
Query: 307 L---ERRYISLANVKYLVLDEADRMLDMGFEPQIRRIV----------EGSDMPSVDN-- 351
+ E+ + L ++ + VLDEADRM++ G +++ I+ EG N
Sbjct: 345 MSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQSILDLLPVTDKPNEGKTQTVKSNDT 404
Query: 352 --------RQTLMFSATFPSEIQHLASDFLK----------------------------- 374
RQT +FSAT L+SDF K
Sbjct: 405 VLNVPKKKRQTFVFSATIA-----LSSDFRKKLKRGSSKSKQSSSGEVNSIEVLSERAGM 459
Query: 375 --DYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSL 432
+ + + + I + + E+ +K+ L +L+ +G T++F + +
Sbjct: 460 RDNVAIIDLTTTSILAPKIEESFIKCEEKEKDAYLYYILSVHGQGRTIVFCTSVTDLRHI 519
Query: 433 TDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFD 492
+ L + G + + Q R +++ F+ IL+AT + ARG+DI NV +I++
Sbjct: 520 SGLLKILGLDVCTLFSEMKQRARLKSIDRFRASENGILIATDLVARGIDIKNVRTIIHYK 579
Query: 493 LPNDIDDYVHRIGRTGRAGNTGVA--------TTFFNRGNKNVAKELVSLLSEANQEVPS 544
LP+ + YVHR GRT RA G + T+ F K+ + E V + N +P+
Sbjct: 580 LPHSAEVYVHRCGRTARAFADGCSIALIEPNETSKFYTLCKSFSMESVKIFPLDNSYMPA 639
>YDR194c [A] KOG0342 ATP-dependent RNA helicase pitchoune
Length = 664
Score = 155 bits (393), Expect = 1e-37
Identities = 125/390 (32%), Positives = 192/390 (49%), Gaps = 35/390 (8%)
Query: 166 LDPLLLDNIKLARFTKPTPVQKYSV-PIVAA-GRDLMACAQTGSGKTGGFLFPVLSESFS 223
LD + I F TPVQ+ ++ PI+++ D++A A+TG+GKT FL P+ +
Sbjct: 113 LDKEIHKAITRMEFPGLTPVQQKTIKPILSSEDHDVIARAKTGTGKTFAFLIPIFQHLIN 172
Query: 224 SGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSW----VKPMVVYGG 279
+ + Y+ K AVI+APTR+LA QI E KK ++ + + GG
Sbjct: 173 T-------KFDSQYMVK----AVIVAPTRDLALQIEAEVKKIHDMNYGLKKYACVSLVGG 221
Query: 280 ASIDNQIKQM-RYGCNLLVATPGRLTDLLERRYISLAN-VKYLVLDEADRMLDMGFEPQI 337
+ +M + N+++ATPGRL D+LE+ V Y VLDEADR+L++GF +
Sbjct: 222 TDFRAAMNKMNKLRPNIVIATPGRLIDVLEKYSNKFFRFVDYKVLDEADRLLEIGFRDDL 281
Query: 338 RRI---VEGSDMPSVDNRQTLMFSATFPSEIQHLASDFL--KDYVFLSV--GRVGSTSEN 390
I + + S DN +TL+FSAT ++Q LA++ + K+ +FL E
Sbjct: 282 ETISGILNEKNSKSADNIKTLLFSATLDDKVQKLANNIMNKKECLFLDTVDKNEPEAHER 341
Query: 391 ITQKILYVEDFDKN------DTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKAT 444
I Q ++ E F + + + +IF T + L L E K
Sbjct: 342 IDQSVVISEKFANSIFAAVEHIKKQIKERDSNYKAIIFAPTVKFTSFLCSILKNEFKKDL 401
Query: 445 AI---HGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYV 501
I HG TQ +R + FK + ILV T V ARG+D PNV V+ +P+++ +Y+
Sbjct: 402 PILEFHGKITQNKRTSLVKRFKKDESGILVCTDVGARGMDFPNVHEVLQIGVPSELANYI 461
Query: 502 HRIGRTGRAGNTGVATTFFNRGNKNVAKEL 531
HRIGRT R+G G + F + +EL
Sbjct: 462 HRIGRTARSGKEGSSVLFICKDELPFVREL 491
>7300808 [A] KOG0342 ATP-dependent RNA helicase pitchoune
Length = 663
Score = 155 bits (392), Expect = 2e-37
Identities = 109/344 (31%), Positives = 176/344 (50%), Gaps = 19/344 (5%)
Query: 174 IKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAA 233
IK FT+ T +Q S+ + GRDL+ AQTGSGKT FL P + E +
Sbjct: 185 IKEMGFTEMTEIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAV-ELINKLRFMPRNGT 243
Query: 234 GNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGC 293
G +I++PTREL+ Q + K+ +V GG++ + +++ G
Sbjct: 244 G----------VIIISPTRELSMQTFGVLKELMAHHHHTYGLVMGGSNRQVESEKLGKGI 293
Query: 294 NLLVATPGRLTDLLERRYISL-ANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNR 352
N+LVATPGRL D L+ L N++ L++DE DR+L++GFE ++++I+ + +P R
Sbjct: 294 NILVATPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQII--NLLPK--RR 349
Query: 353 QTLMFSATFPSEIQHLASDFLKD---YVFLSVGRVGSTSENITQKILYVEDFDKNDTLLD 409
QT++FSAT + I+ L+ LK YV + + +T + + Q + + L
Sbjct: 350 QTMLFSATQTARIEALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLLVLFT 409
Query: 410 LLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATI 469
L + + ++F + + + T+IHG + Q +R F + I
Sbjct: 410 FLKKNRKKKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQFCNAESGI 469
Query: 470 LVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNT 513
L+ T VAARGLDIP V ++ +D P+D +Y+HR+GRT R T
Sbjct: 470 LLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGT 513
>At3g18600 [A] KOG0342 ATP-dependent RNA helicase pitchoune
Length = 568
Score = 155 bits (391), Expect = 2e-37
Identities = 109/339 (32%), Positives = 172/339 (50%), Gaps = 18/339 (5%)
Query: 174 IKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAA 233
IK F T +Q S+ + G+D++ A+TGSGKT FL P + F S
Sbjct: 104 IKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAVELLFKER-FSPRNGT 162
Query: 234 GNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGC 293
G +++ PTRELA Q + A++ +V GG + ++ +++ G
Sbjct: 163 G----------VIVICPTRELAIQTKNVAEELLKHHSQTVSMVIGGNNRRSEAQRIASGS 212
Query: 294 NLLVATPGRLTDLLER-RYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNR 352
NL++ATPGRL D L+ + ++K LV+DEADR+L+ FE + +I++ +P R
Sbjct: 213 NLVIATPGRLLDHLQNTKAFIYKHLKCLVIDEADRILEENFEEDMNKILK--ILPKT--R 268
Query: 353 QTLMFSATFPSEIQHLASDFLKDYVFLSV--GRVGSTSENITQKILYVEDFDKNDTLLDL 410
QT +FSAT S+++ LA L V + V GR T+E + Q V + L+
Sbjct: 269 QTALFSATQTSKVKDLARVSLTSPVHVDVDDGRRKVTNEGLEQGYCVVPSKQRLILLISF 328
Query: 411 LAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATIL 470
L + ++F T ++ T+ + + + IHG Q R + F + IL
Sbjct: 329 LKKNLNKKIMVFFSTCKSVQFHTEIMKISDVDVSDIHGGMDQNRRTKTFFDFMKAKKGIL 388
Query: 471 VATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGR 509
+ T VAARGLDIP+V +I +D P+ +Y+HR+GRT R
Sbjct: 389 LCTDVAARGLDIPSVDWIIQYDPPDKPTEYIHRVGRTAR 427
>At5g65900 [A] KOG0342 ATP-dependent RNA helicase pitchoune
Length = 633
Score = 154 bits (388), Expect = 5e-37
Identities = 115/354 (32%), Positives = 173/354 (48%), Gaps = 21/354 (5%)
Query: 161 FHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSE 220
F S L +IK F + T +Q ++P + G D++ A+TGSGKT FL P +
Sbjct: 156 FESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAVEL 215
Query: 221 SFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFT-YRSWVKPMVVYGG 279
+ + + +++ PTRELA Q Y AK+ Y S V+ GG
Sbjct: 216 LYRV-----------KFTPRNGTGVLVICPTRELAIQSYGVAKELLKYHSQTVGKVI-GG 263
Query: 280 ASIDNQIKQMRYGCNLLVATPGRLTDLLERRY-ISLANVKYLVLDEADRMLDMGFEPQIR 338
+ + + G NLLVATPGRL D LE N+K+LV+DEADR+L+ FE ++
Sbjct: 264 EKRKTEAEILAKGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLK 323
Query: 339 RIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSV--GRVGSTSENITQKIL 396
+I+ + +P RQT +FSAT ++++ LA L V++ V GR T+E + Q
Sbjct: 324 KIL--NLLPKT--RQTSLFSATQSAKVEDLARVSLTSPVYIDVDEGRKEVTNEGLEQGYC 379
Query: 397 YVEDFDKNDTLLDLLAA-SNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGER 455
V + LL L + ++F T ++ + F I G Q +R
Sbjct: 380 VVPSAMRLLFLLTFLKRFQGKKKIMVFFSTCKSTKFHAELFRYIKFDCLEIRGGIDQNKR 439
Query: 456 ERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGR 509
F IL+ T VAARGLD P+V ++ +D P++ DY+HR+GRT R
Sbjct: 440 TPTFLQFIKAETGILLCTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRVGRTAR 493
>At5g54910 [A] KOG0343 RNA Helicase
Length = 739
Score = 153 bits (386), Expect = 9e-37
Identities = 116/398 (29%), Positives = 192/398 (48%), Gaps = 30/398 (7%)
Query: 158 ISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPV 217
+ +F P+ +K A++ T VQ ++P GRD++ A+TGSGKT F+ P+
Sbjct: 70 VRKFAQLPISDKTKRGLKDAKYVDMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPI 129
Query: 218 LSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKF-TYRSWVKPMVV 276
L E S + G +I++PTRELA Q + K + + +++
Sbjct: 130 L-EKLHRERWSPEDGVG----------CIIISPTRELAAQTFGVLNKVGKFHKFSAGLLI 178
Query: 277 YGGASIDNQIKQMRYGCNLLVATPGRLTDLL-ERRYISLANVKYLVLDEADRMLDMGFEP 335
G +D + K+ + N+LV PGRL + E ++ L+LDEADR+LD F+
Sbjct: 179 GGREGVDVE-KERVHEMNILVCAPGRLLQHMDETPNFECPQLQILILDEADRVLDSAFKG 237
Query: 336 QIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKD--YVFLSVGRVGSTSENITQ 393
Q+ I+ S +P +RQTL+FSAT +++ LA L+D Y+ + V +T ++ Q
Sbjct: 238 QLDPII--SQLPK--HRQTLLFSATQTKKVKDLARLSLRDPEYISVHAEAVTATPTSLMQ 293
Query: 394 KILYVEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFL--IMEGFKATAIHGDRT 451
++ V K D L + L+F+ TK+ + + + G ++HG +
Sbjct: 294 TVMIVPVEKKLDMLWSFIKTHLNSRILVFLSTKKQVKFVHEAFNKLRPGIPLKSLHGKMS 353
Query: 452 QGERERALSAFKTGRATILVATAVAARGLDIPN-VTHVINFDLPNDIDDYVHRIGRTGRA 510
Q +R S F R ++L T V ARGLD V V+ D P D+ Y+HR+GRT R
Sbjct: 354 QEKRMGVYSQF-IERQSVLFCTDVLARGLDFDKAVDWVVQVDCPEDVASYIHRVGRTARF 412
Query: 511 GNTGVATTFFNRGNKNVAKEL------VSLLSEANQEV 542
G + F + + ++L + L+ NQ++
Sbjct: 413 YTQGKSLLFLTPSEEKMIEKLQEAKVPIKLIKANNQKL 450
>At1g12770_1 [J] KOG0327 Translation initiation factor 4F helicase subunit
(eIF-4A) and related helicases
Length = 543
Score = 152 bits (385), Expect = 1e-36
Identities = 120/416 (28%), Positives = 188/416 (44%), Gaps = 50/416 (12%)
Query: 161 FHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSE 220
F L LLD+++ F+ PT VQ +VP + G D + + TGSGKT +L P+LSE
Sbjct: 112 FEELGLPDSLLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLAYLLPILSE 171
Query: 221 SFSSGPASTPEAAGNSYI-KKVYPTAVILAPTRELATQIYDEAKKF---TYRSWVKPMVV 276
GP + + +S K+ A+I+AP+REL QI E +K +R V+ +V
Sbjct: 172 I---GPLAEKSRSSHSENDKRTEIQAMIVAPSRELGMQIVREVEKLLGPVHRRMVQQLV- 227
Query: 277 YGGASIDNQIKQMRYGCN-LLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEP 335
GGA+ Q + ++ ++V TPGR+ ++ + + ++LVLDE D +L F
Sbjct: 228 -GGANRMRQEEALKKNKPAIVVGTPGRIAEISKGGKLHTHGCRFLVLDEVDELLSFNFRE 286
Query: 336 QIRRIVEGSDMPS-------VD---NRQTLMFSATFPSEIQHLASDFLKDYVFLSV---- 381
I RI+E S VD NRQT++ SAT P + A + + V +
Sbjct: 287 DIHRILEHVGKRSGAGPKGEVDERANRQTILVSATVPFSVIRAAKSWSHEPVLVQANKVT 346
Query: 382 ----------------------GRVGSTSENITQKILYVEDFDKN----DTLLDLLAASN 415
G++ +T +++ + + K+ DTL + A +
Sbjct: 347 PLDTVQPSAPVMSLTPTTSEADGQIQTTIQSLPPALKHYYCISKHQHKVDTLRRCVHALD 406
Query: 416 EGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAV 475
+ F+ R + L G + +HGD + R L FK G +LV +
Sbjct: 407 AQSVIAFMNHSRQLKDVVYKLEARGMNSAEMHGDLGKLGRSTVLKKFKNGEIKVLVTNEL 466
Query: 476 AARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKEL 531
+ARGLD+ V+N +LP D Y HR GRTGR G G T + K++
Sbjct: 467 SARGLDVAECDLVVNLELPTDAVHYAHRAGRTGRLGRKGTVVTVCEESQVFIVKKM 522
>CE27553 [A] KOG0337 ATP-dependent RNA helicase
Length = 853
Score = 152 bits (383), Expect = 2e-36
Identities = 107/384 (27%), Positives = 182/384 (46%), Gaps = 54/384 (14%)
Query: 166 LDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSG 225
LD + I+ F +PTP+Q+ ++P + G+D++A ++TGSGKT F+ P+L +
Sbjct: 31 LDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQK----- 85
Query: 226 PASTPEAAGNSYIKKVYPT---AVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASI 282
+K+ T A++++PTRELA Q + K+ + ++ + GG I
Sbjct: 86 ------------LKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQI 133
Query: 283 DNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRIVE 342
+ Q + ++L+ATPGRL ++ + L+ V+Y+V DEADR+ +MGF+ Q+ ++
Sbjct: 134 EEQFSTIHENPDILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQDQLTETLK 193
Query: 343 GSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENIT---------Q 393
++RQTL+FSAT P + A L D + + + S+ ++ +
Sbjct: 194 RIP----ESRQTLLFSATLPKMLVDFAKAGLTDPMLVRLDVDEKVSDKLSMVFCMCRPDE 249
Query: 394 KILYVEDFDKNDTLLDLLAAS---------------------NEGLTLIFVETKRAADSL 432
K+ + +N LL S T++F T + + +
Sbjct: 250 KLFALLHLCRNFCFKKLLETSLKKCKISKKKVPLLKKVRMDRENKQTVVFCATMKHVEYV 309
Query: 433 TDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFD 492
L G + ++ R+ + F + ILV T VAARG+DIP + VIN
Sbjct: 310 VGILHRAGIDCSFVYSQLDATARKMNIQKFHEKQNNILVVTDVAARGVDIPLLDTVINLH 369
Query: 493 LPNDIDDYVHRIGRTGRAGNTGVA 516
P +VHR+GR RAG +G A
Sbjct: 370 FPPKAKLFVHRVGRVARAGRSGTA 393
>ECU09g1200 [J] KOG0327 Translation initiation factor 4F helicase subunit
(eIF-4A) and related helicases
Length = 425
Score = 151 bits (381), Expect = 3e-36
Identities = 115/426 (26%), Positives = 200/426 (45%), Gaps = 34/426 (7%)
Query: 133 QSSGINFDNYDDIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPI 192
+SSG ++D+ ++S + + ++ L LL I F P+ +QK ++
Sbjct: 15 RSSGTEIREFEDLRSDSSQIRMFDTWEDYG---LKEDLLKGIYSIGFETPSFIQKAAIQP 71
Query: 193 VAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTR 252
+ GRD+ A AQ+G+GKTG F L S + ++LA TR
Sbjct: 72 IIDGRDIRAQAQSGTGKTGAFAVAALQICDMSQDVTQ---------------ILVLASTR 116
Query: 253 ELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYI 312
E+A Q + + ++ GG+ I + +++V TPGR+ ++ +
Sbjct: 117 EIAAQNAARFEDLGCFMGARVALLSGGSPIAADKVALEKKPHIVVGTPGRVEHMININEL 176
Query: 313 SLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDF 372
S+ N+K V+DEAD ML GF+ Q++ I + + D Q MFSAT+ E ++ +
Sbjct: 177 SMDNIKLFVIDEADEMLKAGFQEQVKSIFRR--ITNKDEVQIAMFSATYDEEELRVSEEI 234
Query: 373 LKDYVFLSVGRVGSTSENITQKILYV----------EDF--DKNDTLLDLLAASNEGLTL 420
L + V + + T + I Q + + ED+ K TL D+ G ++
Sbjct: 235 LINPVIIDLRYNDQTLKGIRQYFIDLRKEPPFRKGREDYLLPKLVTLYDIFRKQRLGQSI 294
Query: 421 IFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGL 480
+F+ +K A + D+LI ++ I + TQ ERER L+ F+ G L+++ + +RG+
Sbjct: 295 VFINSKEDARIVYDWLIRHEWECELISAELTQAERERTLNRFRGGTGRCLISSGLLSRGI 354
Query: 481 DIPNVTHVINFDLPN--DIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEA 538
DI N++ V D+P+ Y+HRIGR+GR G G+A K + +
Sbjct: 355 DIQNLSVVFCLDVPSFERKSTYIHRIGRSGRYGRKGIAINIVYEHELKNLKAIERFYNTT 414
Query: 539 NQEVPS 544
+E+P+
Sbjct: 415 IKELPA 420
>YFL002c [A] KOG0345 ATP-dependent RNA helicase
Length = 606
Score = 150 bits (378), Expect = 7e-36
Identities = 111/375 (29%), Positives = 181/375 (47%), Gaps = 28/375 (7%)
Query: 168 PLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPA 227
P + + + F TPVQ ++P++A +D++ + TGSGKT F+ PVL +
Sbjct: 16 PWIRTGLDVMGFETMTPVQASTIPMLAGNKDVVVDSVTGSGKTAAFVIPVLEKVVK---- 71
Query: 228 STPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFT--YRSWVKP-----MVVYGGA 280
E A S KK + ++I+APTREL+ QI F Y S + P +V A
Sbjct: 72 ---EEANTSKFKKAHFHSLIIAPTRELSRQIESVVLSFLEHYPSDLFPIKCQLLVGTNEA 128
Query: 281 SIDNQIKQ-MRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRR 339
++ + + +R +L+ TPGR+ D L+ + + +V+DEADR+LDM F +
Sbjct: 129 TVRDDVSNFLRNRPQILIGTPGRVLDFLQMPAVKTSACSMVVMDEADRLLDMSFIKDTEK 188
Query: 340 IVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVE 399
I+ +P R+T +FSAT S + L++ V ++V ++ V
Sbjct: 189 ILRL--LPK--QRRTGLFSATMRSAGSDIFKTGLRNPVRITVNSKNQAPSSLKLNYCVVN 244
Query: 400 DFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFL--------IMEGFKATAIHGDRT 451
+K L+ +L +++ T + F+ ++ + ++HG
Sbjct: 245 PAEKLQLLVSILNNYKFKKCIVYFPTCVSVSYFYSFIQYLGKRNILVNEVEIFSLHGKLQ 304
Query: 452 QGERERALSAFKTGRA-TILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRA 510
R + L+AF + ++L T VAARG+DIP+V VI D P + D ++HR GRTGRA
Sbjct: 305 TSARTKTLTAFTDSLSNSVLFTTDVAARGIDIPDVDLVIQLDPPTNTDMFMHRCGRTGRA 364
Query: 511 GNTGVATTFFNRGNK 525
G A TF N G +
Sbjct: 365 NRVGKAITFLNEGRE 379
>Hs21327697 [A] KOG0332 ATP-dependent RNA helicase
Length = 369
Score = 149 bits (377), Expect = 1e-35
Identities = 114/360 (31%), Positives = 179/360 (49%), Gaps = 54/360 (15%)
Query: 179 FTKPTPVQKYSVPIVAAG--RDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNS 236
F +P+ +Q+ ++P++ A ++L+A +Q+G+GKT F+ +LS +
Sbjct: 3 FNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNAL------------ 50
Query: 237 YIKKVYPTAVILAPTRELATQ---IYDEAKKFTYRSWVKPMVVYG--------GASIDNQ 285
+++P + LAPT ELA Q + ++ KF V V+Y G I Q
Sbjct: 51 ---ELFPQCLCLAPTYELALQTGRVVEQMGKFC----VDVQVMYAIRGNRIPRGTDITKQ 103
Query: 286 IKQMRYGCNLLVATPGRLTD-LLERRYISLANVKYLVLDEADRMLD-MGFEPQIRRIVEG 343
I ++ TPG + D + + I L ++ VLDEAD M+D GF RI
Sbjct: 104 I---------IIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRA 154
Query: 344 SDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDF-D 402
+PS Q L+FSATF + H A + D + + + T NI Q + E D
Sbjct: 155 --LPS--ECQMLLFSATFEDSVWHFAERIIPDPNVIKLRKEELTLNNIRQYYVLCEHRKD 210
Query: 403 KNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAF 462
K L ++ + G +IF +T+R A LT +I +G + + + G+ T +R + F
Sbjct: 211 KYQALCNIYGSITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRF 270
Query: 463 KTGRATILVATAVAARGLDIPNVTHVINFDLP------NDIDDYVHRIGRTGRAGNTGVA 516
+ G+ +L+ T V ARG+D+ VT V+NFDLP D + Y+HRIGRTGR G G+A
Sbjct: 271 RDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLA 330
>HsM7019399 [A] KOG0332 ATP-dependent RNA helicase
Length = 369
Score = 148 bits (374), Expect = 2e-35
Identities = 114/360 (31%), Positives = 178/360 (48%), Gaps = 54/360 (15%)
Query: 179 FTKPTPVQKYSVPIVAAG--RDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNS 236
F +P+ +Q+ ++P++ A ++L+A +Q+G+GKT F+ +LS +
Sbjct: 3 FNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNAL------------ 50
Query: 237 YIKKVYPTAVILAPTRELATQ---IYDEAKKFTYRSWVKPMVVYG--------GASIDNQ 285
+++P + LAPT ELA Q + ++ KF V V+Y G I Q
Sbjct: 51 ---ELFPQCLCLAPTYELALQTGRVVEQMGKFC----VDVQVMYAIRGNRIPRGTDITKQ 103
Query: 286 IKQMRYGCNLLVATPGRLTD-LLERRYISLANVKYLVLDEADRMLD-MGFEPQIRRIVEG 343
I ++ TPG + D + + I L ++ VLDEAD M+D GF RI
Sbjct: 104 I---------IIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRA 154
Query: 344 SDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDF-D 402
+PS Q L+FSATF + H A + D + + + T NI Q + E D
Sbjct: 155 --LPS--ECQMLLFSATFEDSVWHFAERIIPDPNVIKLRKEELTLNNIRQYYVLCEHRKD 210
Query: 403 KNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAF 462
K L ++ + G +IF +T+R A LT +I +G + + + G+ T +R F
Sbjct: 211 KYQALCNIYGSITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASITQRF 270
Query: 463 KTGRATILVATAVAARGLDIPNVTHVINFDLP------NDIDDYVHRIGRTGRAGNTGVA 516
+ G+ +L+ T V ARG+D+ VT V+NFDLP D + Y+HRIGRTGR G G+A
Sbjct: 271 RDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLA 330
>At1g63250 [A] KOG0342 ATP-dependent RNA helicase pitchoune
Length = 798
Score = 148 bits (373), Expect = 3e-35
Identities = 114/371 (30%), Positives = 181/371 (48%), Gaps = 32/371 (8%)
Query: 161 FHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLS- 219
F + PL L + + K T VQ ++ G+D + A+TG+GK+ FL P +
Sbjct: 330 FDESCISPLTLKALSASGILKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIET 389
Query: 220 --ESFSSGPASTPEAAGNSYIKKVYPT-AVILAPTRELATQIYDEAKKFT-YRSWVKPMV 275
++ +SG + KV P A+IL PTRELA+QI E K + +
Sbjct: 390 VLKAMNSGKG----------VNKVAPIFALILCPTRELASQIAAEGKALLKFHDGIGVQT 439
Query: 276 VYGGASID-NQIKQMRYGCNLLVATPGRLTDLLERRY---ISLANVKYLVLDEADRMLDM 331
+ GG +Q + C +L+ATPGRL D +E + L +K ++DEAD +LD+
Sbjct: 440 LIGGTRFKLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDL 499
Query: 332 GFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLK-DYVFLSVGRVG--STS 388
GF + +I++ +P RQ+L+FSAT P E++ ++ LK D+ ++ +G T
Sbjct: 500 GFRRDVEKIIDC--LPR--QRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETH 555
Query: 389 ENITQKILYVEDFDKNDTLLDLLAASNEGLT-----LIFVETKRAADSLTDFLIMEGFKA 443
+ + Q + V + + L+ L + T ++F T + L
Sbjct: 556 DKVRQSCI-VAPHESHFHLVPHLLKEHINNTPDYKIIVFCSTGMVTSLMYTLLREMKLNV 614
Query: 444 TAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHR 503
IH + Q R R FK ILV + V+ARG++ P+VT VI +P+D + Y+HR
Sbjct: 615 REIHARKPQLHRTRVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHR 674
Query: 504 IGRTGRAGNTG 514
+GRTGR G G
Sbjct: 675 LGRTGREGKGG 685
>At2g40700 [A] KOG0348 ATP-dependent RNA helicase
Length = 609
Score = 147 bits (372), Expect = 4e-35
Identities = 120/447 (26%), Positives = 198/447 (43%), Gaps = 89/447 (19%)
Query: 161 FHSPPLDPLLLDNIKLAR-FTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLS 219
F S LD L D +K F PT VQ ++P++ +GRD++ A TG+GKT +L P++
Sbjct: 31 FSSLGLDTKLSDQLKERMGFEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTIAYLAPLIH 90
Query: 220 ESFSSGPASTPEAAGNSYIKKVYPT-AVILAPTRELATQIYDEAKKFTYR-SWVKPMVVY 277
P + + + T A+++ PTREL Q+Y+ +K +R W+ P V
Sbjct: 91 HLQGHSPK----------VDRSHGTFALVIVPTRELCLQVYETLEKLLHRFHWIVPGYVM 140
Query: 278 GGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISL-ANVKYLVLDEADRMLDMGFEPQ 336
GG + ++R G ++L+ATPGRL D L+ + N+++++ DEAD +L++G+ +
Sbjct: 141 GGEKKAKEKARLRKGISILIATPGRLLDHLKNTASFVHKNLRWVIFDEADSILELGYGKE 200
Query: 337 IRRIV------------EGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRV 384
I +I+ E +P +Q L+ SAT ++ LA L D V + +
Sbjct: 201 IEQIIKLLGSGQNEQGEEDDIVPKGIQKQNLLLSATLNDKVNDLAKLSLDDPVMIGLDNT 260
Query: 385 GSTSENITQKILYVEDFDKNDTLLDLLAASN----------------------------- 415
+N++ + D D D ++ + ++N
Sbjct: 261 -KLQQNLSIESPAAPDSDAEDMVIHVNKSANPLSEDYGIPSQLVQRYLRVPCGARLVALL 319
Query: 416 -----------EGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERAL----- 459
++F T+ A D + ++ F+ +G +E L
Sbjct: 320 SVLKNLFEREASQKVVVFFSTRDAVD--FHYSLLSEFQWPPNSETEEEGTKELFLKCKTF 377
Query: 460 ------------SAF---KTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRI 504
SAF KT + +L++T VAARGLD P V +I +D P + +YVHR+
Sbjct: 378 RLHGSMEQEDRRSAFGTFKTEKQAVLLSTDVAARGLDFPKVRCIIQYDCPGEATEYVHRV 437
Query: 505 GRTGRAGNTGVATTFFNRGNKNVAKEL 531
GRT R G G A F + KEL
Sbjct: 438 GRTARIGEKGEALLFLQPIEIDYLKEL 464
>ECU10g1680 [A] KOG0343 RNA Helicase
Length = 452
Score = 146 bits (368), Expect = 1e-34
Identities = 105/377 (27%), Positives = 177/377 (46%), Gaps = 25/377 (6%)
Query: 160 EFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLS 219
+F +D + ++ F VQ+ +P+ G D++ +QTG+GKT FL P L
Sbjct: 5 KFEDLKIDQRIEKGLRENGFVSMKEVQQKVIPMALEGHDIIGSSQTGTGKTLAFLVPTLQ 64
Query: 220 ESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGG 279
S G +++ PTRELA QI+D + + + ++ GG
Sbjct: 65 RLVSLGWGGGDGLG-----------CLVITPTRELALQIFDVLSRIAKYTVLSTGLIMGG 113
Query: 280 ASIDNQIKQMRYGCNLLVATPGRLTD-LLERRYISLANVKYLVLDEADRMLDMGFEPQIR 338
++++ ++ N+LV TPGRL L E Y+S ANV+ L+LDEAD+M++MGF+ +
Sbjct: 114 LEAEDELLKVNQ-MNILVCTPGRLLQHLQENPYLSTANVQILILDEADKMIEMGFKEVLE 172
Query: 339 RIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYV 398
I+E +QTL+FSAT + + L+D +S+ + + Q +
Sbjct: 173 DILEYIP----QKKQTLLFSATPKASTARILK--LEDPRIISIYKEEGFPSQLRQYFYMM 226
Query: 399 EDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKAT----AIHGDRTQGE 454
DK + L + ++ E ++F T + L+ E K + G +Q +
Sbjct: 227 RTGDKINYLHTFIGSNPEVKGIVFFST--CKEVKFHCLLFERLKLRNRIFCLSGGMSQKQ 284
Query: 455 RERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTG 514
R F + IL T + +RGLD P V VI +D P +++ YVHR+GRT R G
Sbjct: 285 RIDVFKRFVKEKNGILFCTDLGSRGLDFPKVDVVIQYDCPCNVETYVHRVGRTARNSERG 344
Query: 515 VATTFFNRGNKNVAKEL 531
+ + G + + ++
Sbjct: 345 ESYVYLVHGEEKLLTDI 361
>Hs6005743 [A] KOG0332 ATP-dependent RNA helicase
Length = 479
Score = 144 bits (362), Expect = 5e-34
Identities = 128/424 (30%), Positives = 200/424 (46%), Gaps = 49/424 (11%)
Query: 116 NANLELELFGVAEDKSFQSSGIN-------FDNYDDIPV-EASGNDVPEPISEFHSPPLD 167
NAN E ED++ QS +N DN + + V + N + F L
Sbjct: 42 NANAEKTDEEEKEDRAAQSL-LNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLK 100
Query: 168 PLLLDNIKLARFTKPTPVQKYSVPIVAAG--RDLMACAQTGSGKTGGFLFPVLSESFSSG 225
P LL + F +P+ +Q+ ++P++ A ++L+A +Q+G+GKT F+ +LS+
Sbjct: 101 PQLLQGVYAMGFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQV---E 157
Query: 226 PASTPEAAGNSYIKKVYPTAVILAPTRELATQ---IYDEAKKFTYRSWVKPMVVYGGASI 282
PA+ YP + L+PT ELA Q + ++ KF P + A
Sbjct: 158 PANK------------YPQCLCLSPTYELALQTGKVIEQMGKFY------PELKLAYAVR 199
Query: 283 DNQIKQ-MRYGCNLLVATPGRLTDLLER-RYISLANVKYLVLDEADRML-DMGFEPQIRR 339
N++++ + +++ TPG + D + ++I +K VLDEAD M+ G + Q R
Sbjct: 200 GNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIR 259
Query: 340 IVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVE 399
I +P N Q L+FSATF + A + D + + R T + I Q +
Sbjct: 260 IQRM--LPR--NCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCS 315
Query: 400 DFD-KNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERA 458
D K L +L A +IF T++ A L L EG + + G+ +R
Sbjct: 316 SRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAV 375
Query: 459 LSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDID------DYVHRIGRTGRAGN 512
+ F+ G+ +LV T V ARG+D+ V+ VINFDLP D D Y+HRIGRTGR G
Sbjct: 376 IERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGK 435
Query: 513 TGVA 516
G+A
Sbjct: 436 RGLA 439
>7296165 [A] KOG0330 ATP-dependent RNA helicase
Length = 536
Score = 143 bits (361), Expect = 7e-34
Identities = 108/359 (30%), Positives = 169/359 (46%), Gaps = 23/359 (6%)
Query: 166 LDPLLLDNIKLARFTKP-TPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSS 224
+ P LL+N+++ K T +QK +P+V + A+TG GKT +L P++ +
Sbjct: 115 IHPQLLENLRVELGIKLLTGIQKQGMPVVHGNEHCLIAAETGCGKTITYLLPIVDKLLQK 174
Query: 225 GPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDN 284
+ K P +IL P RELATQI +K T + +K + GG +
Sbjct: 175 EVVTER--------KLNTPRVLILTPGRELATQIAGVTEKLTQGTNLKVQSLLGGNTKQL 226
Query: 285 QIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGS 344
+ ++LVAT G L+ L+ + V++LVLDEAD +LD F ++ +
Sbjct: 227 MMNPQFEEVDILVATLGALSKLVTTGIYRMEQVRHLVLDEADTLLDDTFTDKLSYFLRRF 286
Query: 345 DMPSVDNR----QTLMFSATFPS---EIQH--LASDFLKDYVFLSVGRVGSTSENITQKI 395
V Q ++ SAT P+ EI H + D +++ V + R+ S ++TQK
Sbjct: 287 PFHLVQKEDAGTQMILASATMPTNTREILHKVIDVDTIREVVSPHLHRLMS---HVTQKF 343
Query: 396 LYVEDFDKNDTLLDLLA--ASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQG 453
L + D+ TLL L+ + ++F +D ++ FL G ++GD
Sbjct: 344 LRLSKADRPATLLSLVKHDLAKRRPLIVFSNKSTTSDFVSIFLNNSGVNCLNLNGDMLMK 403
Query: 454 ERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGN 512
R F+ G +L T V +RGLD HV+NFD P + DY+HR GR GR GN
Sbjct: 404 IRLGRFEQFQNGHCDVLSTTDVGSRGLDTTRARHVVNFDFPLHVSDYIHRCGRIGRVGN 462
>Hs8922886 [A] KOG0332 ATP-dependent RNA helicase
Length = 478
Score = 142 bits (357), Expect = 2e-33
Identities = 118/393 (30%), Positives = 185/393 (47%), Gaps = 41/393 (10%)
Query: 140 DNYDDIPV-EASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAG-- 196
DN + + V + N + F L P LL + F +P+ +Q+ ++P++ A
Sbjct: 71 DNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPP 130
Query: 197 RDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELAT 256
++L+A +Q+G+GKT F+ +LS S YP + L+PT ELA
Sbjct: 131 QNLIAQSQSGTGKTAAFVLAMLSRVEPSDR---------------YPQCLCLSPTYELAL 175
Query: 257 Q---IYDEAKKFTYRSWVKPMVVYGGASIDNQIKQ-MRYGCNLLVATPGRLTDLLER-RY 311
Q + ++ KF P + A N++++ + +++ TPG + D + ++
Sbjct: 176 QTGKVIEQMGKFY------PELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKF 229
Query: 312 ISLANVKYLVLDEADRML-DMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLAS 370
I +K VLDEAD M+ G + Q RI +P N Q L+FSATF + A
Sbjct: 230 IDPKKIKVFVLDEADVMIATQGHQDQSIRIQRM--LPR--NCQMLLFSATFEDSVWKFAQ 285
Query: 371 DFLKDYVFLSVGRVGSTSENITQKILYVEDFD-KNDTLLDLLAASNEGLTLIFVETKRAA 429
+ D + + R T + I Q + D K L +L A +IF T++ A
Sbjct: 286 KVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTA 345
Query: 430 DSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVI 489
L L EG + + G+ +R + F+ G+ +LV T V ARG+D+ V+ VI
Sbjct: 346 SWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVI 405
Query: 490 NFDLPNDID------DYVHRIGRTGRAGNTGVA 516
NFDLP D D Y+HRIGRTGR G G+A
Sbjct: 406 NFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLA 438
>At2g07750 [A] KOG0342 ATP-dependent RNA helicase pitchoune
Length = 845
Score = 141 bits (356), Expect = 3e-33
Identities = 111/370 (30%), Positives = 175/370 (47%), Gaps = 30/370 (8%)
Query: 161 FHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLS- 219
F + PL L + + K T VQ ++ G+D + A+TG+GK+ FL P +
Sbjct: 377 FDESCISPLTLKALSASGIVKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIET 436
Query: 220 --ESFSSGPASTPEAAGNSYIKKVYPTAV-ILAPTRELATQIYDEAKKFTYR-SWVKPMV 275
++ +SG + KV P V IL PTRELA+QI E K +
Sbjct: 437 VLKAMNSGKG----------VHKVAPIFVLILCPTRELASQIAAEGKALLKNHDGIGVQT 486
Query: 276 VYGGASID-NQIKQMRYGCNLLVATPGRLTDLLERRY---ISLANVKYLVLDEADRMLDM 331
+ GG +Q + C +L+ATPGRL D +E + L +K ++DEAD +LD+
Sbjct: 487 LIGGTRFRLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDL 546
Query: 332 GFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLK-DYVFLSVGRVG--STS 388
GF+ + +I++ +P RQ+L+FSAT P E++ ++ LK D+ ++ +G T
Sbjct: 547 GFKRDVEKIIDC--LPR--QRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETH 602
Query: 389 ENITQKILYVEDFDKNDTLLDLLAASNEGLT----LIFVETKRAADSLTDFLIMEGFKAT 444
+ + Q + + LL + ++F T + L
Sbjct: 603 DKVKQSCIVAPHESHFHLVPHLLKEHINNMPDYKIIVFCSTGMVTSLMYTLLREMKLNVR 662
Query: 445 AIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRI 504
IH + Q R FK ILV + V+ARG++ P+VT VI +P+D + Y+HR+
Sbjct: 663 EIHARKPQLHRTCVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRL 722
Query: 505 GRTGRAGNTG 514
GRTGR G G
Sbjct: 723 GRTGREGKGG 732
>CE26853 [A] KOG0342 ATP-dependent RNA helicase pitchoune
Length = 544
Score = 141 bits (355), Expect = 3e-33
Identities = 108/348 (31%), Positives = 174/348 (49%), Gaps = 21/348 (6%)
Query: 170 LLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPAST 229
LL ++ FT T +Q S+ + G+D++A A+TGSGKT FL P +
Sbjct: 79 LLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAI----------- 127
Query: 230 PEAAGNSYIKKVYPTAVIL-APTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQ 288
E K+ T VI+ +PTREL+ Q Y + S + +V GG++ + +
Sbjct: 128 -ELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGSNRSAEKDK 186
Query: 289 MRYGCNLLVATPGRLTDLLERRYISLA-NVKYLVLDEADRMLDMGFEPQIRRIVEGSDMP 347
+ G ++LVATPGRL D L+ L N+K L++DEADR+LD+GFE ++++++ +P
Sbjct: 187 LAKGVSILVATPGRLLDHLQNTDNFLVRNMKCLIIDEADRILDIGFEIEMQQVLR--HLP 244
Query: 348 SVDNRQTLMFSATFPSEIQHLASDFL-KDYVFLSVGRVG--STSENITQKILYVEDFDKN 404
RQ+++FSAT ++ L L + V +SV +T E + Q + +
Sbjct: 245 K--QRQSMLFSATHSPKVDELVKLALHSNPVRVSVHEKAEEATVEGLQQGYIVAPSDKRL 302
Query: 405 DTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKT 464
L L + ++F + + + L +IHG + Q +R F
Sbjct: 303 LLLFTFLKKNKTKKVMVFFSSCNSVKFHHELLNYIDIPCMSIHGKQKQQKRTTTFFQFCQ 362
Query: 465 GRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGN 512
IL+ T VAARGLDIP V ++ +D ++ +Y+HR+GRT R N
Sbjct: 363 AETGILLCTDVAARGLDIPAVDWIVQYDPTDEPREYIHRVGRTARGTN 410
>7294824 [K] KOG4284 DEAD box protein
Length = 1028
Score = 141 bits (355), Expect = 3e-33
Identities = 113/383 (29%), Positives = 179/383 (46%), Gaps = 32/383 (8%)
Query: 148 EASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGS 207
E S + P + F L LL+ +K F PT +Q ++P+ A DL+ +++G+
Sbjct: 14 ERSSDVAPGQVKTFEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAKMDLIIQSKSGT 73
Query: 208 GKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKF-- 265
GKT ++ V+ +SF N I + P A+I+ PTRELA Q+ D
Sbjct: 74 GKTLIYVIAVV-QSF------------NPNINQ--PHAMIVVPTRELAIQVQDTFFHLCK 118
Query: 266 TYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEA 325
++R + K GG + K+M +++ TPGRL L E R ++ ++ LVLDEA
Sbjct: 119 SFRDF-KCSAFIGGTDVAKDRKRMNES-RVIIGTPGRLLHLYENRVFDVSKLRLLVLDEA 176
Query: 326 DRMLDM-GFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRV 384
D++ + + +++E MP NRQ + SAT+ + + + + +S
Sbjct: 177 DQLYQTKSLQHTVSKLIEA--MPK--NRQIIACSATYDQNLDERLAKVMDKPMLISNSER 232
Query: 385 GSTSENITQKILYV----EDFDKNDTLLDLLAASNEGL----TLIFVETKRAADSLTDFL 436
+ I Q + + ++ L +L L +IF ++ ADS ++L
Sbjct: 233 ATVLLGIRQFVYELPQQNNSVEEMRLKLQILGQIFNQLPYEQAIIFASSQMRADSYKNYL 292
Query: 437 IMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPND 496
G I G Q ER ++ ILVAT + ARG+D P+ VIN D P D
Sbjct: 293 TASGIDCHLISGAMEQSERLHVFEGYRNFTMRILVATDLMARGVDSPHANLVINIDPPQD 352
Query: 497 IDDYVHRIGRTGRAGNTGVATTF 519
Y+HRIGR GR G+ G+A TF
Sbjct: 353 HVTYLHRIGRAGRFGSKGIAITF 375
>7302399 [A] KOG0347 RNA helicase
Length = 813
Score = 140 bits (353), Expect = 6e-33
Identities = 123/493 (24%), Positives = 208/493 (41%), Gaps = 79/493 (16%)
Query: 127 AEDKSFQSSGINFDNYDDIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQ 186
AED + Q + + + +P+ E +S ++ + +L + F PT +Q
Sbjct: 186 AEDSADQQESTDEEAPELVPISTGE---AEDMSAWNGLGVPASILRALGEQGFKTPTQIQ 242
Query: 187 KYSVPIVAAGR-DLMACAQTGSGKTGGFLFPVLS-------ESFSSGPASTPEAAGNS-- 236
++P G+ D++ A+TGSGKT F P+L+ + SG P+ G
Sbjct: 243 ALTLPAAIHGKKDILGAAETGSGKTLAFGIPMLAGIMELKQRNIRSGIRKAPKVKGQQPE 302
Query: 237 ------------------------------YIKKVYPT--AVILAPTRELATQIYDEAKK 264
++V ++L PTRELA Q+ +
Sbjct: 303 PAADEHELTPPPEELDHVSGASDEESDAEEQAQRVQTPLYGLVLTPTRELAVQVKNHLVA 362
Query: 265 FTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLL---ERRYISLANVKYLV 321
+ ++ ++GG ++ Q + +R +++VATPGRL +L R + +V +LV
Sbjct: 363 AAKYTGIRVAAIFGGLAVAKQERVLRQCPDIVVATPGRLWELYAQGNRHLGKIEDVSFLV 422
Query: 322 LDEADRMLDMGFEPQIRRIVE--GSDMPSVDNRQTLMFSATF------PSEIQHL----A 369
+DE DRM++ G ++R +++ SD RQ ++SAT P +Q
Sbjct: 423 IDETDRMVEKGHFEELRSLLKVLNSDEQKKHQRQNFVYSATLTLVHDLPDHMQKRNVGKR 482
Query: 370 SDFLKDYV-----------------FLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLA 412
F+K V + + T++ +T+ L D D L
Sbjct: 483 PKFVKQTVDQKIESLIEELGISQPKIVDITSSQQTAQTLTESRLLCP-IDHKDYHLYYFI 541
Query: 413 ASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVA 472
+ G T++F + L + +H + Q +R + L F+ +L+A
Sbjct: 542 QRHPGRTIVFCNSIDCVKRLATLFGLLDCNPLPLHANMIQKQRLKNLERFRDSPTGLLIA 601
Query: 473 TAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELV 532
T VAARGLDIPNV HVI++ +P ++YVHR GRT RA G+ F G +L
Sbjct: 602 TDVAARGLDIPNVEHVIHYQVPRTSENYVHRSGRTARANKHGITVMFMEPGEVKSYVKLY 661
Query: 533 SLLSEANQEVPSF 545
L E +++P F
Sbjct: 662 KTL-ERTEDLPLF 673
>CE27320 [A] KOG0335 ATP-dependent RNA helicase
Length = 463
Score = 140 bits (352), Expect = 8e-33
Identities = 73/146 (50%), Positives = 100/146 (68%), Gaps = 7/146 (4%)
Query: 114 AKNANLELELFGVAEDKSFQSSGINFDNYDDIPVEASGNDVPEPISEFHSPPLDPLLLDN 173
A++ +E ELF S Q SGINFD Y++IPVEA+G+DVP+PIS F L + +N
Sbjct: 324 ARDERIEQELF------SGQLSGINFDKYEEIPVEATGDDVPQPISLFSDLSLHEWIEEN 377
Query: 174 IKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAA 233
IK A + +PTPVQKYS+P + GRDLM+CAQTGSGKT FL P+++ GP + +
Sbjct: 378 IKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSV 437
Query: 234 GNS-YIKKVYPTAVILAPTRELATQI 258
+S KK YP+A++L+PTREL+ Q+
Sbjct: 438 TSSGGRKKQYPSALVLSPTRELSLQV 463
>At3g53110 [A] KOG0332 ATP-dependent RNA helicase
Length = 496
Score = 140 bits (352), Expect = 8e-33
Identities = 119/420 (28%), Positives = 206/420 (48%), Gaps = 35/420 (8%)
Query: 144 DIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLA-RFTKPTPVQKYSVPIVAAG--RDLM 200
+I SG+ S F L P L+ + + +F KP+ +Q S+P++ + L+
Sbjct: 76 NIKAVTSGDTPYTSASRFEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIMTPPHKHLI 135
Query: 201 ACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYD 260
A A GSGKT F+ +LS + +++ P A+ + PTRELA Q +
Sbjct: 136 AQAHNGSGKTTCFVLGMLSRV-------------DPTLRE--PQALCICPTRELANQNME 180
Query: 261 EAKKFTYRSWVKPMVVYGGAS--IDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVK 318
+K + + + ++ + ++++ TPG L + + + L ++K
Sbjct: 181 VLQKMGKFTGITAELAVPDSTRGAPAATRGAPVSAHVVIGTPGTLKKWMAFKRLGLNHLK 240
Query: 319 YLVLDEADRMLDM-GFEPQIRRIVEGSDMPSVD-NRQTLMFSATFPSEIQHLASDFLKDY 376
LV DEAD ML GF +I++ D+ V+ N Q L+FSATF ++ + +KD
Sbjct: 241 ILVFDEADHMLATDGFRDDSLKIMK--DIGRVNPNFQVLLFSATFNETVKDFVARTVKDP 298
Query: 377 VFLSVGRVGSTSENITQ-KILYVEDFDKNDTLLD-LLAASNEGLTLIFVETKRAADSLTD 434
L V R +++ Q K++ ++ +K + + D ++ + G T+IFV+TK +A +
Sbjct: 299 NQLFVKREDLALDSVKQYKVVCPKEQNKIEVIKDQIMELGDIGQTIIFVKTKASAQKVHK 358
Query: 435 FLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLP 494
L G+ T++HG+ T+ +R++ + FK +L+AT V ARG D V V+N++LP
Sbjct: 359 ALAEMGYDVTSVHGNLTESDRDKIVKEFKECLTQVLIATDVIARGFDQQRVNLVVNYNLP 418
Query: 495 N-------DIDDYVHRIGRTGRAGNTG-VATTFFNRGNKNVAKELVSLLSEAN-QEVPSF 545
D + Y+HR+GR GR G G V + G E + EAN +E+ S+
Sbjct: 419 TKYETGEPDYEVYLHRVGRAGRFGRKGAVFNLLLDDGWDKEVMEKIEKYFEANVKEIKSW 478
>YKR024c [A] KOG0348 ATP-dependent RNA helicase
Length = 742
Score = 138 bits (348), Expect = 2e-32
Identities = 124/486 (25%), Positives = 214/486 (43%), Gaps = 83/486 (17%)
Query: 141 NYDDIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLA-RFTKPTPVQKYSVPIV---AAG 196
N D V + ++ P +F S + LL+ +++ R KPT +QK ++P + A
Sbjct: 125 NIHDENVAINPSNAPLKGDQFASLGVSSLLVSHLEQKMRIKKPTSIQKQAIPQIIGNAGK 184
Query: 197 RDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPT-AVILAPTRELA 255
D AQTGSGKT +L P++S + ++++ + A+++APTRELA
Sbjct: 185 NDFFIHAQTGSGKTLSYLLPIISTILNM----------DTHVDRTSGAFALVIAPTRELA 234
Query: 256 TQIYDEAKKF-TYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYI-- 312
+QIY + ++ P ++ GG ++ ++R GCN ++ TPGR+ D L+ +
Sbjct: 235 SQIYHVCSTLVSCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGTPGRVLDHLQNTKVIK 294
Query: 313 --SLANVKYLVLDEADRMLDMGFEPQIRRIVE--------GSDMPSVDNRQT-LMFSATF 361
+++Y+VLDE D+++++GF+ I I++ P + ++ ++ SAT
Sbjct: 295 EQLSQSLRYIVLDEGDKLMELGFDETISEIIKIVHDIPINSEKFPKLPHKLVHMLCSATL 354
Query: 362 PSEIQHLASDFLKDYVFLSVGR------VGSTSENITQKILYVED--------FDKNDTL 407
+ L + LKDY +S G V + + Q+I V N+
Sbjct: 355 TDGVNRLRNVALKDYKLISNGTKKDSDIVTVAPDQLLQRITIVPPKLRLVTLAATLNNIT 414
Query: 408 LDLLAASNEGLTL---IFVETKRAADSLTDF-----------------LIMEG------- 440
D +A+ + TL +FV + + D L+ +G
Sbjct: 415 KDFIASGQQSKTLRTIVFVSCSDSVEFHYDAFSGSDGHHKNLTGDSVRLLTKGNTMFPCF 474
Query: 441 -------FKATAIHGDRTQGERERALSAF------KTGRATILVATAVAARGLDIPNVTH 487
+HG +Q R L F G+ I+ T VA+RGLD+P+V
Sbjct: 475 SDSRDPDVVIYKLHGSLSQQMRTSTLQHFARDNEATKGKHLIMFCTDVASRGLDLPHVGS 534
Query: 488 VINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFLT 547
VI D P ++D++HR+GRT RAG G + F G + + + E+ F
Sbjct: 535 VIELDPPFAVEDHLHRVGRTARAGEKGESLLFLLPGEEEKYMDYIQPYHPMGWELLKFDK 594
Query: 548 TIMREA 553
I+ A
Sbjct: 595 EILMPA 600
>ECU02g1520 [J] KOG0328 Predicted ATP-dependent RNA helicase FAL1 involved in
rRNA maturation DEAD-box superfamily
Length = 425
Score = 138 bits (347), Expect = 3e-32
Identities = 110/373 (29%), Positives = 183/373 (48%), Gaps = 50/373 (13%)
Query: 161 FHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSE 220
F L LL I F KP+ +QK ++P + G +++ +++G+GKT + VL
Sbjct: 53 FSDMGLSDELLKAIYNQGFEKPSLIQKSAIPHILRGHNVVVQSKSGTGKTIAYTCGVL-- 110
Query: 221 SFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGA 280
GN+ I + +++ PTREL+TQ+ + P+ + +
Sbjct: 111 -------------GNTKIGE-RTQVMVVTPTRELSTQVTE-----VISGLAGPLGIKVFS 151
Query: 281 SIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLD---MGFEP-Q 336
++ N+I G ++V +PG + L+E ++ VK +VLDEAD +LD MG + +
Sbjct: 152 ALKNKITDS-IGEEVVVGSPGTILKLMELGKLNYKGVKMIVLDEADILLDKDMMGTQTFR 210
Query: 337 IRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKIL 396
I +++ G+ M + FSATF +++ + D V + R G E K+
Sbjct: 211 ILKLISGAQM--------IFFSATFSEQVKQTIEFYAPDAVKMYEERNGKPDEI---KLF 259
Query: 397 YVEDFDKND-----TLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRT 451
Y+E +N +L + L+ S +IFV TK + L L + + +HGD
Sbjct: 260 YIEAEGENKRRALKSLYEYLSISQ---MIIFVSTKATVNYLRKKLEDDLHSVSCLHGDLE 316
Query: 452 QGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLP-----NDIDDYVHRIGR 506
ERE+A+ F++ ++ IL+ T V +RG+DIP V ++N+DLP Y+HRIGR
Sbjct: 317 IEEREKAVGDFRSSKSKILLTTDVFSRGMDIPQVNLIVNYDLPIYRGVASTQTYIHRIGR 376
Query: 507 TGRAGNTGVATTF 519
+GR G TG F
Sbjct: 377 SGRFGRTGFVVDF 389
>CE01338 [J] KOG0327 Translation initiation factor 4F helicase subunit
(eIF-4A) and related helicases
Length = 363
Score = 137 bits (345), Expect = 5e-32
Identities = 108/370 (29%), Positives = 178/370 (47%), Gaps = 30/370 (8%)
Query: 179 FTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYI 238
F KP+ +QK +V G+D+ +Q GSGKT L +L
Sbjct: 16 FEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQ---------------GIDC 60
Query: 239 KKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVA 298
+ + ++LAP R +A + +++ K V + + +N ++L+
Sbjct: 61 EDAHLQVILLAPQRGMAQRAHEQLKSLGRNLNVNATCLGFDTTAENDKIS-----HVLMG 115
Query: 299 TPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFS 358
TP D L + +K VLDEAD ML GF+ QI + MP + Q ++ S
Sbjct: 116 TP---KDFLSNIPSDTSRIKMFVLDEADEMLSKGFKDQIYEVFRS--MPQ--DVQVVLLS 168
Query: 359 ATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVE-DFDKNDTLLDLLAASNEG 417
AT PSE+ + + F++D + + V + T E I Q + V+ D K + L DLL S E
Sbjct: 169 ATMPSEVLDVTNRFMRDPIRILVKKDELTLEGIRQFYINVQKDEWKFNCLCDLLKTSRET 228
Query: 418 LTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAA 477
LIF T+R LT+ L+ K + HG+ ERE + F + +LV T + A
Sbjct: 229 QALIFCNTRRRVTQLTEQLMSIPIKVSCFHGNMEHNEREDMVKDFNSRNTRVLVTTDLMA 288
Query: 478 RGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSE 537
RG++I + +IN+D+ ++++Y+ R GR G G+ G+ +FF + + K++ + S
Sbjct: 289 RGMNI-RKSLIINYDVSGNMENYMLRNGRQGNFGSKGLPISFFTENDISDLKKIENHYST 347
Query: 538 ANQEVP-SFL 546
+E+P SFL
Sbjct: 348 RIEEMPESFL 357
>7296530 [A] KOG0349 Putative DEAD-box RNA helicase DDX1
Length = 727
Score = 137 bits (345), Expect = 5e-32
Identities = 99/322 (30%), Positives = 151/322 (46%), Gaps = 48/322 (14%)
Query: 243 PTAVILAPTRELATQIYDEAKKFTYR---SWVKPMVVYGGASIDNQIKQMRYGCNLLVAT 299
P A+I+ P+RELA Q Y++ +KF Y V+ +++ GG ++ Q Q+ G +++V T
Sbjct: 287 PQAIIMEPSRELAEQTYNQIEKFKYHLSNPEVRSLLLIGGVRLEEQKAQLMQGTHIVVGT 346
Query: 300 PGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNR--QTLMF 357
PGRL +++ + L + ++ VLDEAD +L G+ I R+ + + D R Q ++
Sbjct: 347 PGRLEEMINSGLVLLTHCRFFVLDEADALLKQGYTELIDRLHKQIPKITSDGRRLQMVVC 406
Query: 358 SAT---------------FPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILY----- 397
SAT FP+ + D + + V V V + Q +
Sbjct: 407 SATLHAFEVKKMAERLMHFPTWVDLKGEDAVPETVHHVVCLVDPQMDTTWQSLRQPIGTD 466
Query: 398 -VEDFD-------------------KNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLI 437
V D D K + + + N +IF TK+ D+L FL
Sbjct: 467 GVHDRDNVHPGNHSKETLSQAVKLLKGEYCVHAIDKHNMDRAIIFCRTKQDCDNLERFLR 526
Query: 438 MEG---FKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLP 494
G + +HGDR ER+ L FK + L+ T VAARGLDI + +IN LP
Sbjct: 527 QRGGKHYSCVCLHGDRKPQERKENLEMFKRQQVKFLICTDVAARGLDITGLPFMINVTLP 586
Query: 495 NDIDDYVHRIGRTGRAGNTGVA 516
+D +YVHRIGR GRA G+A
Sbjct: 587 DDKTNYVHRIGRVGRAERMGLA 608
>At4g34910 [A] KOG0346 RNA helicase
Length = 626
Score = 137 bits (344), Expect = 6e-32
Identities = 120/435 (27%), Positives = 191/435 (43%), Gaps = 62/435 (14%)
Query: 156 EPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLF 215
E F LD L+ + KPT +Q+ ++P + G+D++A A+TGSGKT +L
Sbjct: 43 EAPKSFEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLL 102
Query: 216 PVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKF--TYRSWVKP 273
P+L + FS+ S KK+ P+A IL P+REL Q+Y E R +K
Sbjct: 103 PLLQKLFSADSVSK---------KKLAPSAFILVPSRELCQQVYTEVSSLIELCRVQLKA 153
Query: 274 MVVYGGASIDNQIKQMRYGCNLLVATPGRL-----TDLLERRYISLANVKYLVLDEADRM 328
+ + S + + +LV+TP + +LE +S ++ LVLDEAD +
Sbjct: 154 VQLTSSMSASDMRNALAGLPEILVSTPACIPKCFAAGVLEPTAVS-ESLSILVLDEADLL 212
Query: 329 LDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTS 388
L G+E +R + S +P Q L+ SAT S+++ L L + + L++
Sbjct: 213 LSYGYEDNLRSVT--SIIPR--RCQCLLMSATTSSDVEKLKKLILHNPIVLTLTEDNDKE 268
Query: 389 ENITQKI-LYVEDFDKNDTLLDLLAASN----EGLTLIFVETKRAADSLTDFLIMEGFKA 443
E + + + D LL +LA + LIF+ T L FL G K+
Sbjct: 269 EAVPSNVQQFWISCSAQDKLLHILALLKLEVVQKKILIFINTIDMGFRLKLFLEKFGIKS 328
Query: 444 TAIHGDRTQGERERALSAFKTGRATILVAT------------------------------ 473
++G+ Q R L F G L+AT
Sbjct: 329 AILNGELPQNSRLHILEQFNAGLFDYLIATDDNSQTKKQKEEAKGEANKENKKNNKRSKP 388
Query: 474 -----AVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVA 528
RG+D V VINFD+P + Y+HRIGRTGRA ++G + + +
Sbjct: 389 KLDAEFGVVRGIDFKKVHTVINFDMPQSVTGYIHRIGRTGRAYSSGSSVSLISPDEMEGF 448
Query: 529 KELVSLL-SEANQEV 542
+++ S L S+ N+++
Sbjct: 449 EDIKSFLASDKNKDI 463
>ECU05g1270 [A] KOG0331 ATP-dependent RNA helicase
Length = 426
Score = 135 bits (341), Expect = 1e-31
Identities = 110/376 (29%), Positives = 182/376 (48%), Gaps = 48/376 (12%)
Query: 182 PTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKV 241
PT VQ++ +P + AG + ++TGSGKT ++ P + SG
Sbjct: 79 PTDVQRFVIPYILAGEGVDVISETGSGKTLSYVLPHI-HLLESGDKRL------------ 125
Query: 242 YPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPG 301
+++ PTREL +Q+ +KF+ ++ + + G SI++Q Q+ ++ ++TPG
Sbjct: 126 ----LVIVPTRELVSQVGQVFRKFS-EGLLRIVEITGEVSIESQRLQVSRPFDVAISTPG 180
Query: 302 RLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATF 361
RL +LLE + S+ +Y+V+DEADR++ + I+E P V + FSAT
Sbjct: 181 RLRELLELK--SIGGFEYVVVDEADRLMQHDIRSDVTFILERMK-PEVAS----FFSAT- 232
Query: 362 PSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLA------ASN 415
P E + VG V S ++ + +YVE +K L ++L A N
Sbjct: 233 PFE--------WSGGTRILVGNV-SVGRDVEEFFMYVEKKEKMQVLGEILVSCEGWLAKN 283
Query: 416 EGLTLIFVETKRAADSLTDFLIMEGF-----KATAIHGDRTQGERERALSAFKTGRATIL 470
G+ +E K+ E + +H RT ER+ + A + RA +L
Sbjct: 284 MGVDRNGLEVKKIIVFCNSIRTCENLHKRFRQLLVLHSRRTMQERKAVIEALEGERA-VL 342
Query: 471 VATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKE 530
+AT + RG+DI +V V+N+DLP +D YVHR GRTGR G+A + R ++ + +
Sbjct: 343 IATDLGGRGIDIKDVDLVVNYDLPRAVDGYVHRCGRTGRQ-RKGMALSMICREDREILPK 401
Query: 531 LVSLLSEANQEVPSFL 546
L L+ + VP F+
Sbjct: 402 LKRLVEKRGGTVPGFM 417
>CE18221 [A] KOG0332 ATP-dependent RNA helicase
Length = 613
Score = 135 bits (341), Expect = 1e-31
Identities = 110/399 (27%), Positives = 186/399 (46%), Gaps = 43/399 (10%)
Query: 144 DIPVEASGNDVPEP---ISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAG--RD 198
D+ V+ D P IS F L P +L + F PT +Q+ ++P++ +
Sbjct: 191 DVVVDVQRQDPKSPLYSISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSN 250
Query: 199 LMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQI 258
L+A AQ+G+GKT F+ +L + + P + LAPT ELA QI
Sbjct: 251 LIAQAQSGTGKTAAFVLTMLCRID---------------VNLMCPQCICLAPTLELAKQI 295
Query: 259 YDEAKKFTYRSWVKPMVVYGGASIDNQ--IKQMRYGCNLLVATPGRLTDLLER-RYISLA 315
+ +K ++ + ++ N ++ + +++ TPG D L++ + I +
Sbjct: 296 GEVVEKMG--KFIDNLKIHYAIKGGNMAAMRGRKLTEQIVIGTPGITRDYLQKYKCIDPS 353
Query: 316 NVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKD 375
++ LVLDEAD M+ I + + D+ Q+++FSAT+ + + A+ +K+
Sbjct: 354 KIRCLVLDEADVMIYHQGFTDISTTIYNMVEDASDSVQSMLFSATYDEPVINFATKIIKN 413
Query: 376 YVFLSVGRVGSTSENITQKILYVEDFD-KNDTLLDLLAASNEGLTLIFVETKRAADSLTD 434
+ + + R NI Q + D K +++L + ++IF TK + L +
Sbjct: 414 AIVVMLKREEQALPNIKQFYVQCACRDSKYAAIVNLYSGLAVASSVIFCHTKASVMWLYE 473
Query: 435 FLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLP 494
+ G + +HGD T ER + FK G +L+ T V ARG+D+ V+ VIN+DLP
Sbjct: 474 NMRARGHQVDVLHGDMTVVERADTIIHFKRGDFKVLITTNVFARGIDVAQVSVVINYDLP 533
Query: 495 -----------------NDIDDYVHRIGRTGRAGNTGVA 516
D + Y+HRIGRTGR G TG+A
Sbjct: 534 IKYTDEGTPMVVDGFTQPDCETYLHRIGRTGRFGKTGIA 572
>CE18220 [A] KOG0332 ATP-dependent RNA helicase
Length = 638
Score = 135 bits (341), Expect = 1e-31
Identities = 110/399 (27%), Positives = 186/399 (46%), Gaps = 43/399 (10%)
Query: 144 DIPVEASGNDVPEP---ISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAG--RD 198
D+ V+ D P IS F L P +L + F PT +Q+ ++P++ +
Sbjct: 216 DVVVDVQRQDPKSPLYSISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSN 275
Query: 199 LMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQI 258
L+A AQ+G+GKT F+ +L + + P + LAPT ELA QI
Sbjct: 276 LIAQAQSGTGKTAAFVLTMLCRID---------------VNLMCPQCICLAPTLELAKQI 320
Query: 259 YDEAKKFTYRSWVKPMVVYGGASIDNQ--IKQMRYGCNLLVATPGRLTDLLER-RYISLA 315
+ +K ++ + ++ N ++ + +++ TPG D L++ + I +
Sbjct: 321 GEVVEKMG--KFIDNLKIHYAIKGGNMAAMRGRKLTEQIVIGTPGITRDYLQKYKCIDPS 378
Query: 316 NVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKD 375
++ LVLDEAD M+ I + + D+ Q+++FSAT+ + + A+ +K+
Sbjct: 379 KIRCLVLDEADVMIYHQGFTDISTTIYNMVEDASDSVQSMLFSATYDEPVINFATKIIKN 438
Query: 376 YVFLSVGRVGSTSENITQKILYVEDFD-KNDTLLDLLAASNEGLTLIFVETKRAADSLTD 434
+ + + R NI Q + D K +++L + ++IF TK + L +
Sbjct: 439 AIVVMLKREEQALPNIKQFYVQCACRDSKYAAIVNLYSGLAVASSVIFCHTKASVMWLYE 498
Query: 435 FLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLP 494
+ G + +HGD T ER + FK G +L+ T V ARG+D+ V+ VIN+DLP
Sbjct: 499 NMRARGHQVDVLHGDMTVVERADTIIHFKRGDFKVLITTNVFARGIDVAQVSVVINYDLP 558
Query: 495 -----------------NDIDDYVHRIGRTGRAGNTGVA 516
D + Y+HRIGRTGR G TG+A
Sbjct: 559 IKYTDEGTPMVVDGFTQPDCETYLHRIGRTGRFGKTGIA 597
>CE18219 [A] KOG0332 ATP-dependent RNA helicase
Length = 1022
Score = 135 bits (341), Expect = 1e-31
Identities = 110/399 (27%), Positives = 186/399 (46%), Gaps = 43/399 (10%)
Query: 144 DIPVEASGNDVPEP---ISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAG--RD 198
D+ V+ D P IS F L P +L + F PT +Q+ ++P++ +
Sbjct: 600 DVVVDVQRQDPKSPLYSISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSN 659
Query: 199 LMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQI 258
L+A AQ+G+GKT F+ +L + + P + LAPT ELA QI
Sbjct: 660 LIAQAQSGTGKTAAFVLTMLCRID---------------VNLMCPQCICLAPTLELAKQI 704
Query: 259 YDEAKKFTYRSWVKPMVVYGGASIDNQ--IKQMRYGCNLLVATPGRLTDLLER-RYISLA 315
+ +K ++ + ++ N ++ + +++ TPG D L++ + I +
Sbjct: 705 GEVVEKMG--KFIDNLKIHYAIKGGNMAAMRGRKLTEQIVIGTPGITRDYLQKYKCIDPS 762
Query: 316 NVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKD 375
++ LVLDEAD M+ I + + D+ Q+++FSAT+ + + A+ +K+
Sbjct: 763 KIRCLVLDEADVMIYHQGFTDISTTIYNMVEDASDSVQSMLFSATYDEPVINFATKIIKN 822
Query: 376 YVFLSVGRVGSTSENITQKILYVEDFD-KNDTLLDLLAASNEGLTLIFVETKRAADSLTD 434
+ + + R NI Q + D K +++L + ++IF TK + L +
Sbjct: 823 AIVVMLKREEQALPNIKQFYVQCACRDSKYAAIVNLYSGLAVASSVIFCHTKASVMWLYE 882
Query: 435 FLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLP 494
+ G + +HGD T ER + FK G +L+ T V ARG+D+ V+ VIN+DLP
Sbjct: 883 NMRARGHQVDVLHGDMTVVERADTIIHFKRGDFKVLITTNVFARGIDVAQVSVVINYDLP 942
Query: 495 -----------------NDIDDYVHRIGRTGRAGNTGVA 516
D + Y+HRIGRTGR G TG+A
Sbjct: 943 IKYTDEGTPMVVDGFTQPDCETYLHRIGRTGRFGKTGIA 981
>Hs4826686 [A] KOG0349 Putative DEAD-box RNA helicase DDX1
Length = 740
Score = 134 bits (338), Expect = 3e-31
Identities = 96/329 (29%), Positives = 156/329 (47%), Gaps = 55/329 (16%)
Query: 243 PTAVILAPTRELATQIYD---EAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVAT 299
P A+I+ P+RELA Q + + KK+ ++ +++ GG + +Q+ + G +++V T
Sbjct: 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346
Query: 300 PGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNR--QTLMF 357
PGRL DL+ ++L+ V++LVLDEAD +L G+ I R+ + D + Q ++
Sbjct: 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406
Query: 358 SAT---------------FPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKI------- 395
SAT FP+ + D + D V V V ++ + +++
Sbjct: 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466
Query: 396 --LYVEDFD-----------------KNDTLLDLLAASNEGLTLIFVETKRAADSLTDFL 436
++ +D K + + + +IF TK D+L +
Sbjct: 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526
Query: 437 IMEG---------FKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTH 487
I +G F +HGDR ER++ L FK G L+ T VAARG+DI V +
Sbjct: 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586
Query: 488 VINFDLPNDIDDYVHRIGRTGRAGNTGVA 516
VIN LP++ +YVHRIGR GRA G+A
Sbjct: 587 VINVTLPDEKQNYVHRIGRVGRAERMGLA 615
>Hs9966805 [A] KOG0347 RNA helicase
Length = 859
Score = 134 bits (337), Expect = 4e-31
Identities = 101/337 (29%), Positives = 162/337 (47%), Gaps = 33/337 (9%)
Query: 240 KVYPT----AVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNL 295
K YP ++L PTRELA Q+ + +K ++ GG S Q + + +
Sbjct: 381 KAYPKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQRMLNRRPEI 440
Query: 296 LVATPGRLTDLLERRYISLANVKYL---VLDEADRMLDMGFEPQIRRIVEG-SDMPSVDN 351
+VATPGRL +L++ ++ L N++ L V+DEADRM++ G ++ +++E +D
Sbjct: 441 VVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEMLNDSQYNPK 500
Query: 352 RQTLMFSATF------PSEIQH------LASDFLKDYVFLSVGRVG-----------STS 388
RQTL+FSAT P+ I H + D + +G G +T
Sbjct: 501 RQTLVFSATLTLVHQAPARILHKKHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATV 560
Query: 389 ENITQKILYVEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHG 448
E +T+ ++ E D+ D L G +L+F + L+ L + +H
Sbjct: 561 ETLTETKIHCET-DEKDFYLYYFLMQYPGRSLVFANSISCIKRLSGLLKVLDIMPLTLHA 619
Query: 449 DRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTG 508
Q +R R L F +L+AT VAARGLDIP V HVI++ +P + YVHR GRT
Sbjct: 620 CMHQKQRLRNLEQFARLEDCVLLATDVAARGLDIPKVQHVIHYQVPRTSEIYVHRSGRTA 679
Query: 509 RAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSF 545
RA N G++ + K++ L + ++++P F
Sbjct: 680 RATNEGLSLMLIGPEDVINFKKIYKTLKK-DEDIPLF 715
>CE11190 [A] KOG0347 RNA helicase
Length = 746
Score = 133 bits (335), Expect = 7e-31
Identities = 111/385 (28%), Positives = 178/385 (45%), Gaps = 50/385 (12%)
Query: 170 LLDNIKLARFTKPTPVQKYSVPIVAAGR-DLMACAQTGSGKTGGFLFP----VLSESFSS 224
+L+ I+ F++PT +Q +P R D++ A+TGSGKT F P +L S S
Sbjct: 166 VLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDS 225
Query: 225 GPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDN 284
+ E G P A+I+APTREL QI + + + GG +
Sbjct: 226 QETESTEVRG--------PRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLA--- 274
Query: 285 QIKQMR----YGCNLLVATPGRLTDLLERR-----YISLANVKYLVLDEADRMLDMGFEP 335
Q+KQ R +++VATPGRL +++ ++K LV+DE DRM++ G+
Sbjct: 275 QVKQERIISQQRPDIVVATPGRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEGYFA 334
Query: 336 QIRRIVEGSDMPSVDNR-QTLMFSATFP-SEIQHLASDFLK------------------- 374
++ I+ S + QTL+FSAT ++ Q +A + K
Sbjct: 335 ELTHILNKIHEESEKEKLQTLVFSATLTFAKAQDVAEEEKKKAKELSSQQKIQRLIKLTG 394
Query: 375 ----DYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNEGLTLIFVETKRAAD 430
+ + + R T+ + + + + + DT L L G T++FV + AA
Sbjct: 395 LRENKHKVIDLTRQMGTAGCLVEARINCGNLLEKDTSLVYLLTRYPGRTIVFVNSIDAAR 454
Query: 431 SLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVIN 490
L L +H Q +R + L F + +L+AT VAARGLDI + HVI+
Sbjct: 455 RLYSVLKSVNIDPMILHAKMIQKQRLKNLEKFSESKNAVLLATDVAARGLDIQGIDHVIH 514
Query: 491 FDLPNDIDDYVHRIGRTGRAGNTGV 515
+ +P ++ Y+HR GRT RA + G+
Sbjct: 515 YQVPKKVEIYIHRSGRTARASHRGL 539
>YLR276c [A] KOG0346 RNA helicase
Length = 594
Score = 133 bits (334), Expect = 9e-31
Identities = 129/471 (27%), Positives = 194/471 (40%), Gaps = 84/471 (17%)
Query: 141 NYDDIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPI-VAAGRDL 199
+Y+ VE + D FH LD LL IK F PT +Q +++P+ + RD+
Sbjct: 2 SYEKKSVEGAYIDDSTTFEAFH---LDSRLLQAIKNIGFQYPTLIQSHAIPLALQQKRDI 58
Query: 200 MACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIY 259
+A A TGSGKT +L PV+ E+ + N + +IL PTRELA Q+Y
Sbjct: 59 IAKAATGSGKTLAYLIPVI-ETILEYKKTIDNGEENGTL------GIILVPTRELAQQVY 111
Query: 260 DEAKKFTY--RSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRY--ISLA 315
+ +K ++ + + S + ++V TPG+L DLL+ + ISL
Sbjct: 112 NVLEKLVLYCSKDIRTLNISSDMSDSVLSTLLMDQPEIIVGTPGKLLDLLQTKINSISLN 171
Query: 316 NVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKD 375
+K+LV+DE D +L G++ + +I G +P N QT + SAT +IQ L F +
Sbjct: 172 ELKFLVVDEVDLVLTFGYQDDLNKI--GEYLPLKKNLQTFLMSATLNDDIQALKQKFCRS 229
Query: 376 YVFLSVG--RVGSTSENITQKILYVEDFDKNDTLLDLLAASN--EGLTLIFVETKRAADS 431
L + + Q + V +FDK L ++ N +G TLIFV
Sbjct: 230 PAILKFNDEEINKNQNKLLQYYVKVSEFDKF-LLCYVIFKLNLIKGKTLIFVNNIDRGYR 288
Query: 432 LTDFLIMEGFKATAIH-----------------------------------------GDR 450
L + G K+ ++ G
Sbjct: 289 LKLVMEQFGIKSCILNSELPVNSRQHIVDQFNKNVYQLLIATDDTEYIKEEDDEIEEGHN 348
Query: 451 TQGERERALSAFKTGRATILVATAV---------AARGLDIPNVTHVINFDLPNDIDDYV 501
T+ + E++L V +RG+D NV V+NFDLP YV
Sbjct: 349 TENQEEKSLEGEPENDKKPSKKKKVQVKKDKEYGVSRGVDFKNVACVLNFDLPTTAKSYV 408
Query: 502 HRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFLTTIMRE 552
HR+GRT R G TG A +F V L E + PS L T ++
Sbjct: 409 HRVGRTARGGKTGTAISF------------VVPLKEFGKHKPSMLQTAKKD 447
>At4g09730 [A] KOG0331 ATP-dependent RNA helicase
Length = 496
Score = 132 bits (333), Expect = 1e-30
Identities = 104/347 (29%), Positives = 161/347 (45%), Gaps = 25/347 (7%)
Query: 182 PTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFP---VLSESFSSGPASTPEAAGNSYI 238
PT +Q +P V + ++ + TGSGKT +L P VLSE A+ +
Sbjct: 135 PTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLLPIVQVLSELMREDEANLGKKT----- 189
Query: 239 KKVYPTAVILAPTRELATQI--YDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLL 296
K P V+L PTREL+ Q+ + + +RS ++V GG+ I Q + +++
Sbjct: 190 KPRRPRTVVLCPTRELSEQVCLHQDYHHARFRS----ILVSGGSRIRPQEDSLNNAIDMV 245
Query: 297 VATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLM 356
V TPGR+ +E + ++ YLVLDEAD M D GF P+IR+ + + + +
Sbjct: 246 VGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPEIRKFLAPLNQHIKVVNEIVS 305
Query: 357 FSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVE-DFDKNDTLLDLLAAS- 414
F A +Q L + + L + N + + DK + LL +L S
Sbjct: 306 FQA-----VQKLVDEEFQGIEHLRTSTLHKKIANARHDFIKLSGGEDKLEALLQVLEPSL 360
Query: 415 -NEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFK--TGRATILV 471
++F T ++ ++ +L HG+ +R L FK G LV
Sbjct: 361 AKGSKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEVPAEQRVENLKKFKDEEGDCPTLV 420
Query: 472 ATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATT 518
T +AARGLD+ +V HV+ FD P + DY+HR GRT R G G+ T
Sbjct: 421 CTDLAARGLDL-DVDHVVMFDFPKNSIDYLHRTGRTARMGAKGLFHT 466
>At1g71280 [A] KOG0345 ATP-dependent RNA helicase
Length = 465
Score = 132 bits (331), Expect = 2e-30
Identities = 107/352 (30%), Positives = 169/352 (47%), Gaps = 45/352 (12%)
Query: 143 DDIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMAC 202
D P + P SE PPL +++ + + F TPVQ ++P + + +D++
Sbjct: 2 DSSPPNTIIEEAPPRFSEL-KPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVD 60
Query: 203 AQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPT-AVILAPTRELATQIYDE 261
A TGSGKT FL P + S NSY K + VI++PTREL+ QI+
Sbjct: 61 AATGSGKTLAFLLPFIEIIRRS----------NSYPPKPHQVMGVIISPTRELSAQIHKV 110
Query: 262 AKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLER-RYISLANVKYL 320
A+ + K V N +++ G NLL+ TPGRL+D+++R ++ N++ L
Sbjct: 111 ARAVRL-DFAKCREVEADM---NTLEE--EGANLLIGTPGRLSDMMKRMEFLDFRNLEIL 164
Query: 321 VLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLS 380
+LDEADR+LDMGF+ Q+ I+ S +P R+T +FSAT + LA L++
Sbjct: 165 ILDEADRLLDMGFQKQVNYII--SRLPK--QRRTGLFSATQTQAVADLAKAGLRN----- 215
Query: 381 VGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNEGLTLIFVETKRAAD----SLTDFL 436
L E K+ L+ LL + ++F T D ++
Sbjct: 216 -------------PYLKCEADQKSSQLVHLLIENKNKKLVVFFMTCACVDYWGLVISKIP 262
Query: 437 IMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHV 488
++ HG Q R+ AL++F + +L+ T VAARGLDIP + ++
Sbjct: 263 SLKSISFFPTHGKMDQKGRDTALASFTEASSGVLLCTDVAARGLDIPGIVYI 314
>Hs8922976 [A] KOG0330 ATP-dependent RNA helicase
Length = 540
Score = 127 bits (320), Expect = 4e-29
Identities = 108/409 (26%), Positives = 179/409 (43%), Gaps = 34/409 (8%)
Query: 166 LDPLLLDNIKLA--RFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFS 223
L+P +L ++ A +PT VQ ++P + GR ++ A+TGSGKT +L P+L
Sbjct: 133 LEPRVLHALQEAAPEVVQPTTVQSSTIPSLLRGRHVVCAAETGSGKTLSYLLPLLQRLLG 192
Query: 224 SGPA-STPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASI 282
S P A P ++L P+RELA Q+ A+ + + GG +
Sbjct: 193 QPSLDSLPIPA---------PRGLVLVPSRELAQQVRAVAQPLGRSLGLLVRDLEGGHGM 243
Query: 283 DNQIKQM--RYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRI 340
Q+ + ++LVATPG L L+ R ISL + +LVLDEAD +LD F + I
Sbjct: 244 RRIRLQLSRQPSADVLVATPGALWKALKSRLISLEQLSFLVLDEADTLLDESFLELVDYI 303
Query: 341 VEGSDM---------PSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSV--GRVGSTSE 389
+E S + P Q ++ ATFP + L + ++ ++
Sbjct: 304 LEKSHIAEGPADLEDPFNPKAQLVLVGATFPEGVGQLLNKVASPDAVTTITSSKLHCIMP 363
Query: 390 NITQKILYVEDFDKNDTLLDLLAASNE-------GLTLIFVETKRAADSLTDFLIMEGFK 442
++ Q L ++ DK L+ +L + G L+F + + L L +
Sbjct: 364 HVKQTFLRLKGADKVAELVHILKHRDRAERTGPSGTVLVFCNSSSTVNWLGYILDDHKIQ 423
Query: 443 ATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVH 502
+ G R +F+ IL+ T +A+RGLD V V+N+D P + DY+H
Sbjct: 424 HLRLQGQMPALMRVGIFQSFQKSSRDILLCTDIASRGLDSTGVELVVNYDFPPTLQDYIH 483
Query: 503 RIGRTGRAGN--TGVATTFFNRGNKNVAKELVSLLSEANQEVPSFLTTI 549
R GR GR G+ G +F + + L + + +P +++
Sbjct: 484 RAGRVGRVGSEVPGTVISFVTHPWDVSLVQKIELAARRRRSLPGLASSV 532
>7295505 [A] KOG0346 RNA helicase
Length = 560
Score = 125 bits (315), Expect = 1e-28
Identities = 106/408 (25%), Positives = 188/408 (45%), Gaps = 51/408 (12%)
Query: 160 EFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLS 219
+FH LD +L + + +PT +Q ++P++ G+D++ A+TGSGKT + P++
Sbjct: 10 QFHELELDQRILKAVAQLGWQQPTLIQSTAIPLLLEGKDVVVRARTGSGKTATYALPLIQ 69
Query: 220 ESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGG 279
+ +S ++ + Y +AV+LAPT++L Q ++ S K + V
Sbjct: 70 KILNSKLNASEQ----------YVSAVVLAPTKKLCRQSRKVIEQLV-ESCGKVVRVADI 118
Query: 280 ASIDNQIKQMRYGCN----LLVATPGRLTDLLER-RYISLANVKYLVLDEADRMLDMGFE 334
A N R+ + ++VATP L E + L +V+ LV+DEAD + G+E
Sbjct: 119 ADSSNDTVTQRHALSESPDIVVATPANLLAYAEAGSVVDLKHVETLVVDEADLVFAYGYE 178
Query: 335 PQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSEN-ITQ 393
+R+++ +P + Q ++ SAT ++ + L + V L + ++ ++
Sbjct: 179 KDFKRLIK--HLPPI--YQAVLVSATLTDDVVRMKGLCLNNPVTLKLEEPELVPQDQLSH 234
Query: 394 KILYVEDFDKNDTLLDLLAASN-EGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQ 452
+ + E+ DK L LL G ++IFV + + FL G +A ++ +
Sbjct: 235 QRILAEENDKPAILYALLKLRLIRGKSIIFVNSIDRCYKVRLFLEQFGIRACVLNSELPA 294
Query: 453 GERERALSAFKTGRATILVAT-------------------------AVAARGLDIPNVTH 487
R +S F G I++A+ + A+RG+D V +
Sbjct: 295 NIRIHTISQFNKGTYDIIIASDEHHMEKPGGKSATNRKSPRSGDMESSASRGIDFQCVNN 354
Query: 488 VINFDLPNDIDDYVHRIGRTGRAGNTGVATTFF----NRGNKNVAKEL 531
VINFD P D+ Y+HR GRT R N G +F ++ N +V K+L
Sbjct: 355 VINFDFPRDVTSYIHRAGRTARGNNKGSVLSFVSMKESKVNDSVEKKL 402
>Hs9506931 [A] KOG0346 RNA helicase
Length = 547
Score = 125 bits (314), Expect = 2e-28
Identities = 113/418 (27%), Positives = 193/418 (46%), Gaps = 55/418 (13%)
Query: 161 FHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLS- 219
F LDP LL + +++PT +Q+ ++P+ G+DL+A A+TGSGKT + P+L
Sbjct: 9 FEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAIPMLQL 68
Query: 220 --ESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKF-TYRSWVKPMVV 276
++GP G ++L PT+ELA Q ++ TY + + + V
Sbjct: 69 LLHRKATGPVVEQAVRG-----------LVLVPTKELARQAQSMIQQLATYCA--RDVRV 115
Query: 277 YGGASIDNQIKQ---MRYGCNLLVATPGRLTDLLERRYISLAN-VKYLVLDEADRMLDMG 332
++ ++ + Q + +++V TP R+ L++ + L + ++ LV+DEAD + G
Sbjct: 116 ANVSAAEDSVSQRAVLMEKPDVVVGTPSRILSHLQQDSLKLRDSLELLVVDEADLLFSFG 175
Query: 333 FEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENIT 392
FE +++ ++ +P + Q + SATF ++Q L L + V L + +
Sbjct: 176 FEEELKSLL--CHLPRI--YQAFLMSATFNEDVQALKELILHNPVTLKLQESQLPGPDQL 231
Query: 393 QKILYVEDFDKNDTLL--DLLAASN-EGLTLIFVETKRAADSLTDFLIMEGFKATAIHGD 449
Q+ V + +++ LL LL S G +L+FV T + L FL ++G+
Sbjct: 232 QQFQVVCETEEDKFLLLYALLKLSLIRGKSLLFVNTLERSYRLRLFLEQFSIPTCVLNGE 291
Query: 450 RTQGERERALSAFKTGRATILVAT---------------------------AVAARGLDI 482
R +S F G ++AT A ARG+D
Sbjct: 292 LPLRSRCHIISQFNQGFYDCVIATDAEVLGAPVKGKRRGRGPKGDKASDPEAGVARGIDF 351
Query: 483 PNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQ 540
+V+ V+NFDLP + Y+HR GRT RA N G+ TF + ++ LLS N+
Sbjct: 352 HHVSAVLNFDLPPTPEAYIHRAGRTARANNPGIVLTFVLPTEQFHLGKIEELLSGENR 409
>Hs20336298 [A] KOG0348 ATP-dependent RNA helicase
Length = 585
Score = 125 bits (314), Expect = 2e-28
Identities = 80/224 (35%), Positives = 123/224 (54%), Gaps = 13/224 (5%)
Query: 161 FHSPPLDPLLLDNIK-LARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLS 219
FH L P L+ I + + + T VQK S+P++ GRD + +QTGSGKT + PV+
Sbjct: 232 FHELGLHPHLISTINTVLKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVV- 290
Query: 220 ESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYR-SWVKPMVVYG 278
+S + + + G P A++L PTRELA Q +D +K +W+ P V+ G
Sbjct: 291 QSLQAMESKIQRSDG--------PYALVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMG 342
Query: 279 GASIDNQIKQMRYGCNLLVATPGRLTD-LLERRYISLANVKYLVLDEADRMLDMGFEPQI 337
G ++ ++R G N+L++TPGRL D + + I + +++LV DEADR+LD+GFE I
Sbjct: 343 GEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDI 402
Query: 338 RRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSV 381
I+ + RQ ++ SAT + LA L D V +SV
Sbjct: 403 TVILNAVN-AECQKRQNVLLSATLTEGVTRLADISLHDPVSISV 445
>Hs17505907 [A] KOG0348 ATP-dependent RNA helicase
Length = 851
Score = 125 bits (314), Expect = 2e-28
Identities = 80/224 (35%), Positives = 123/224 (54%), Gaps = 13/224 (5%)
Query: 161 FHSPPLDPLLLDNIK-LARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLS 219
FH L P L+ I + + + T VQK S+P++ GRD + +QTGSGKT + PV+
Sbjct: 232 FHELGLHPHLISTINTVLKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVV- 290
Query: 220 ESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYR-SWVKPMVVYG 278
+S + + + G P A++L PTRELA Q +D +K +W+ P V+ G
Sbjct: 291 QSLQAMESKIQRSDG--------PYALVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMG 342
Query: 279 GASIDNQIKQMRYGCNLLVATPGRLTD-LLERRYISLANVKYLVLDEADRMLDMGFEPQI 337
G ++ ++R G N+L++TPGRL D + + I + +++LV DEADR+LD+GFE I
Sbjct: 343 GEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDI 402
Query: 338 RRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSV 381
I+ + RQ ++ SAT + LA L D V +SV
Sbjct: 403 TVILNAVN-AECQKRQNVLLSATLTEGVTRLADISLHDPVSISV 445
Score = 65.5 bits (158), Expect = 2e-10
Identities = 31/73 (42%), Positives = 42/73 (57%)
Query: 442 KATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYV 501
K +HG Q ER F R +L+ T VAARGLD+P VT ++ ++ P+ +Y+
Sbjct: 554 KFLRLHGGMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVTWIVQYNAPSSPAEYI 613
Query: 502 HRIGRTGRAGNTG 514
HRIGRT R G G
Sbjct: 614 HRIGRTARIGCHG 626
>CE28485 [K] KOG4284 DEAD box protein
Length = 963
Score = 124 bits (312), Expect = 3e-28
Identities = 93/322 (28%), Positives = 159/322 (48%), Gaps = 22/322 (6%)
Query: 198 DLMACAQTGSGKTGGFLFPVLS-ESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELAT 256
D++ A++G+GKT +F VL+ E+ S +S+I+KV I+ PTRE++
Sbjct: 51 DMLVQAKSGTGKT--LVFSVLAVENLDSR---------SSHIQKV-----IVTPTREISV 94
Query: 257 QIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLAN 316
QI + +K + V G A N I + +++ TPGR+ L++ +++++
Sbjct: 95 QIKETVRKVAPTGARTSVYVGGSAHKLNLIDLKQTRPQIVIGTPGRIAQLVKLGAMNMSH 154
Query: 317 VKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDY 376
V + VLDEAD+++D F I I+ + +P + RQ +FSAT+P + +L S FL+D
Sbjct: 155 VDFFVLDEADKLMDEVFRDDINIII--NSLPQI--RQVAVFSATYPRNLDNLLSTFLRDA 210
Query: 377 VFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFL 436
+ I Q ++ + + L +L + L+F + + + L
Sbjct: 211 ALVRFNADDVQLFGIKQYVV-AKCSPMLEKLTHVLKSIRYVQALVFCDQISKCEPIATHL 269
Query: 437 IMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPND 496
G T + +Q +R+ A+ + R ILV++ + ARG+D NV V+N D +
Sbjct: 270 KSSGLDVTFVSSAMSQKDRQLAVDQLRAKRVKILVSSDLTARGIDADNVNLVVNIDAAAN 329
Query: 497 IDDYVHRIGRTGRAGNTGVATT 518
+ Y HRIGR R G G A T
Sbjct: 330 EETYFHRIGRAARFGAHGAAVT 351
>At3g06980 [A] KOG0331 ATP-dependent RNA helicase
Length = 781
Score = 124 bits (312), Expect = 3e-28
Identities = 104/388 (26%), Positives = 177/388 (44%), Gaps = 36/388 (9%)
Query: 170 LLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPAST 229
++ +K F +P +Q + V G+ + Q+GSGKT +L PV+
Sbjct: 385 MMKALKEQNFDRPAHIQAMAFSPVIDGKSCIIADQSGSGKTLAYLVPVIQR------LRE 438
Query: 230 PEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWV--KPMVVYGGASIDNQIK 287
E G+S P ++L PT ELA+Q+ + + +S V + MVV GG Q++
Sbjct: 439 EELQGHSKSSPGCPRVIVLVPTAELASQVLANCRSIS-KSGVPFRSMVVTGGFRQRTQLE 497
Query: 288 QMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRML-DMGFEPQIRRIVEGSDM 346
+ G ++L+ATPGR T L+ + L+N++ +LDE D + D FE ++ ++ S +
Sbjct: 498 NLEQGVDVLIATPGRFTYLMNEGILGLSNLRCAILDEVDILFGDDEFEAALQNLINSSPV 557
Query: 347 PSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFD---- 402
+ Q L +AT P EI + + D + RV S + + ++ D
Sbjct: 558 TA----QYLFVTATLPLEIYNKLVEVFPDCEVVMGPRVHRVSNALEEFLVDCSGDDNAEK 613
Query: 403 --------KNDTLLDLLAASNEGLTLIF---VETKRAADSLTDFLIMEGFKATAI--HGD 449
K LL ++ + T+IF +ET R +++ + + + + H
Sbjct: 614 TPETAFQNKKTALLQIMEENPVSKTIIFCNKIETCRKVENIFKRVDRKERQLHVLPFHAA 673
Query: 450 RTQGERERALSAFKTGR----ATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIG 505
+Q R + F + + + LV T A+RG+D V HV+ FD P D +YV R+G
Sbjct: 674 LSQESRLTNMQEFTSSQPEENSLFLVCTDRASRGIDFSGVDHVVLFDFPRDPSEYVRRVG 733
Query: 506 RTGR-AGNTGVATTFFNRGNKNVAKELV 532
RT R A G A F +A+ ++
Sbjct: 734 RTARGARGKGKAFIFVVGKQVGLARRII 761
>Hs4826688 [J] KOG0327 Translation initiation factor 4F helicase subunit
(eIF-4A) and related helicases
Length = 439
Score = 122 bits (305), Expect = 2e-27
Identities = 111/370 (30%), Positives = 178/370 (48%), Gaps = 31/370 (8%)
Query: 165 PLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSS 224
P+ P L + +F TP+Q +A G ++ A TG+GKT FL P+LS
Sbjct: 2 PIKPALQAQFE-QQFKAQTPIQAAVWEKLAQGDNIFGLAPTGTGKTLAFLLPILSR---- 56
Query: 225 GPASTPEAAGNSYIKKVYPTAV-ILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASID 283
KV T V ILAP++ELA Q A+++ V + GGA+
Sbjct: 57 ------------IDPKVKQTQVLILAPSQELAMQTTAVAREWGALVDVSVTSLIGGANGR 104
Query: 284 NQIKQMRYGC-NLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRIVE 342
Q +++ +++V T GR+ +L+ + L ++ ++ DEAD ML ++ +
Sbjct: 105 RQADKLKKDKPHIVVGTLGRVLTMLDGGALKLNGLQTVIFDEADAMLSDERRDSLQALA- 163
Query: 343 GSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFD 402
+ +P+ + Q +FSAT +++++A F ++ +SVG + IT + YV+
Sbjct: 164 -AQLPT--DVQLGLFSATSGVDLKYVADTFGQEVRPVSVGTDAPAA--ITHEFQYVDQKA 218
Query: 403 KNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAI-HGDRTQGERERALSA 461
K L+ L A N+ L+F T ++ L +I D+ Q +R AL
Sbjct: 219 KASLLIQL--ARNKQQALVFFNTISGLVNMQATLRHAHASVMSIGSNDKRQVQRADALRL 276
Query: 462 FKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFN 521
FK G ++L+ T VAARGLDI ++ V+N LP Y+HR GRTGR G G N
Sbjct: 277 FKKGEVSLLLVTDVAARGLDIEDLPLVVNAQLPQRKKTYIHRAGRTGRMGKPG---RVLN 333
Query: 522 RGNKNVAKEL 531
GN + ++L
Sbjct: 334 LGNDHDIRDL 343
>CE03821 [A] KOG0345 ATP-dependent RNA helicase
Length = 578
Score = 122 bits (305), Expect = 2e-27
Identities = 100/330 (30%), Positives = 158/330 (47%), Gaps = 29/330 (8%)
Query: 198 DLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQ 257
D++ + TGSGKT F+ P++ N+ ++ A+IL+P+REL +Q
Sbjct: 48 DVVVESPTGSGKTLAFVLPMM------------RMIQNAKLQPADIGALILSPSRELCSQ 95
Query: 258 IYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRY-GCNLLVATPGRLTDLLERRYISLAN 316
I + F + + V GG +D IK + N+LVATPGRL +++ +A
Sbjct: 96 IVSVIQPFAEKLNLTVETVTGGQKVDKNIKMFKNKNVNILVATPGRLFQIIQHEKTLIAR 155
Query: 317 ----VKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDF 372
++ LV+DEADR ++ FE +R I+ S +P R+T +FSAT E L
Sbjct: 156 KMRTLQLLVIDEADRFNEIQFEDHMREIL--SCIPK--QRRTGLFSATQVKEEDDLMVFG 211
Query: 373 LKDYVFLSVGRVGSTSENITQKILYVE--DFDKNDTLLDLLAASNEGLTLIFVETKRAAD 430
L++ + V + +++ T K YVE +K L+ + + LIF + +
Sbjct: 212 LRNAKQVKVAQERNSAAPSTLKNYYVECRADEKTSVCLEFIRQRTDKKILIFFPSCNSVR 271
Query: 431 SLTDFLIMEGFKAT----AIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVT 486
+ I E A+HG + R + AF ++++T V ARG+DI ++
Sbjct: 272 YF--YKIFERCLGKRPLFAVHGKCSNPHRASQIKAFSDSTNGVMISTDVMARGIDISDID 329
Query: 487 HVINFDLPNDIDDYVHRIGRTGRAGNTGVA 516
VI FDLP +VHR GRT R G G A
Sbjct: 330 WVIQFDLPKHSSWFVHRAGRTARCGREGNA 359
>CE06825 [A] KOG0335 ATP-dependent RNA helicase
Length = 528
Score = 119 bits (298), Expect = 1e-26
Identities = 104/422 (24%), Positives = 185/422 (43%), Gaps = 52/422 (12%)
Query: 167 DPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGP 226
D +++N+K T VQ+ S+ ++ GR L+ A TG GKT FL P + + +
Sbjct: 101 DQRIVNNLKCVHVTTFNAVQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALKNRQ 160
Query: 227 ASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQI 286
++ E K P+ +I+A T L Q+++ + + + ID +
Sbjct: 161 SNCFEYT------KPSPSILIMASTSALVDQLFNRCELILGLQCMDNVEPIRDIKIDKLV 214
Query: 287 KQMRYG---CNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLD-MGFEPQIRRIVE 342
+ C++ T G+L +E + L N+K ++LDEAD+M+D F P I I++
Sbjct: 215 ANHPFTKGQCDIAFCTIGKLKATIECGDVCLDNLKTIILDEADKMIDNCAFGPDINWILD 274
Query: 343 GSDMPSVDNRQTLMFSATFPS-----------EIQHLASDF---------LKDYVFLSVG 382
+++N Q+ FSAT+ +++ L D + Y+ V
Sbjct: 275 QLKEENLENLQSCFFSATYNKNANGTIALTVLQMRMLGEDDPWSVIICPRMSGYITQRVV 334
Query: 383 RVGSTSEN------------ITQKILYVEDFDKNDTLLDLLAASNEGLTLIFVETKRAAD 430
RVG N I +K++ D D +T NE + IF ET +
Sbjct: 335 RVGRGRPNDIRSHPWVIKMGIIRKLI---DDDLKETGCSKDGPYNETIA-IFCETVQRVT 390
Query: 431 SLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVIN 490
+T L G+ + T+ ++ ++ + + +V T + ARG+D+ +V H I
Sbjct: 391 QVTMALRQLGYNFKPVCSMITKNQQLVTVNDLEFRKIHGVVCTNILARGIDVSSVKHTII 450
Query: 491 FDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGN------KNVAKELVSLLSEANQEVPS 544
++ D D Y HRIGR GR G G +T NV ++L + + E+ +++P
Sbjct: 451 MEMSADFDTYKHRIGRVGRDGCGGKSTVLVEHHQLQGGPASNVIEQLYNFMKESKEDIPQ 510
Query: 545 FL 546
++
Sbjct: 511 WM 512
>CE27728 [A] KOG0346 RNA helicase
Length = 634
Score = 119 bits (297), Expect = 2e-26
Identities = 106/399 (26%), Positives = 176/399 (43%), Gaps = 61/399 (15%)
Query: 166 LDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSG 225
LD +L +I + K VQ+ + + +++M A+TGSGKTG FL P++ + +
Sbjct: 96 LDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQKLIAES 155
Query: 226 PASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQ 285
+ V P+AVI+APT+EL TQIY K F S P + N+
Sbjct: 156 KTND---------GSVGPSAVIIAPTKELITQIY---KLFVKLSQALPFLQAINLCDINE 203
Query: 286 IKQ---MRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRIVE 342
+ + +++V TPG+L + R V YLV+DEAD +L G+E ++ +I
Sbjct: 204 EENSVWLEDRSHVVVTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEMIKI-- 261
Query: 343 GSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVF---LSVGRVGSTSENITQKILYVE 399
S +P Q LM SAT ++ L F+ V L+ G + ++ + ++
Sbjct: 262 RSKLP--PTYQCLMTSATLKDDMTTLKKLFMTGPVITIKLTEGDLPNSDQLTQYQLTCGS 319
Query: 400 DFDKNDTLLDLLAAS-NEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERA 458
D ++ L+ + G +++FV T L L + G K+ ++ R
Sbjct: 320 DEERFAILVAMFKLKLIVGRSILFVNTIDRCYKLMLILRVFGLKSCILNSAMPANSRCHV 379
Query: 459 LSAFKTGRATILVATAVA--------------------------------------ARGL 480
++ F G I++A+ V+ +RG+
Sbjct: 380 INQFNEGSYQIVIASDVSDADGSKLKEEIAGKSDEKPEKDEKKGKKASKLDKESGVSRGI 439
Query: 481 DIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTF 519
D +V++V+NFD P D Y+HR+GRT R N G A +F
Sbjct: 440 DFHHVSNVVNFDFPETTDAYIHRVGRTARGFNKGTALSF 478
>Hs22054507 [A] KOG0342 ATP-dependent RNA helicase pitchoune
Length = 729
Score = 117 bits (293), Expect = 5e-26
Identities = 97/343 (28%), Positives = 156/343 (45%), Gaps = 63/343 (18%)
Query: 171 LDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTP 230
L IK F T +Q ++ + GRDL+A A+TGS + L+ P + P
Sbjct: 381 LKAIKEMSFMNMTEIQHKTIRSLLEGRDLLAAAKTGSVE--------LTVKLKFMPTNRP 432
Query: 231 EAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMR 290
IL+PTRELA QI+ A ++ ++ GG + + +++
Sbjct: 433 GV-------------FILSPTRELAMQIFGGANTHHMHTYG---LIMGGDNTSAEAQKLA 476
Query: 291 YGCNLLVATPGRLTDLLERRY-ISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSV 349
G N++VATPG L D ++ N++YLV+DEADR+LD+GFE ++++I++ +P+
Sbjct: 477 NGINIIVATPGHLLDYMQNTPGFMYKNLQYLVIDEADRILDVGFEEELKQIIK--LLPTC 534
Query: 350 DNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLD 409
R T++ SAT +++ LA LK +N +KI
Sbjct: 535 --RHTMLLSATQTRKVEDLARISLKK----------GAIKNRKRKI-------------- 568
Query: 410 LLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATI 469
++F + + + L AIHG + Q + F + I
Sbjct: 569 ----------MVFFSSSMSVKYHYELLNYMDLPILAIHGKQKQNKGTTTFFQFCKADSGI 618
Query: 470 LVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGN 512
L+ VAARGLDIP V ++ D +D +Y+HR+ RT R N
Sbjct: 619 LLCMDVAARGLDIPEVDWIVQHDPLDDPKEYIHRVSRTARGLN 661
>SPCC285.03 [A] KOG0350 DEAD-box ATP-dependent RNA helicase
Length = 604
Score = 116 bits (291), Expect = 9e-26
Identities = 112/449 (24%), Positives = 193/449 (42%), Gaps = 82/449 (18%)
Query: 155 PEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIV----------AAGRDLMACAQ 204
P EF S + L++ ++ T+ VQ +P++ + G D+ A
Sbjct: 122 PNTTVEFSSLNISSKLVERLQKQNITRGFAVQAAVLPLLLQDGRHGPMYSYGGDVCVSAA 181
Query: 205 TGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKK 264
TGSGKT ++ P++ + + + ++ V++ PTREL Q+ +
Sbjct: 182 TGSGKTLSYVIPIV------------QCLSHRTVPRL--RCVVIVPTRELTVQVAKTFEY 227
Query: 265 FTYRSWVKPMVVYGGASIDNQIKQMRYGCN-----LLVATPGRLTDLLER-RYISLANVK 318
+ + ++ G S+ ++ Q+ N +LV+TPGRL D + SL +++
Sbjct: 228 YMSGAGLQVCAWTGQKSLRHETYQLNGDENECRIDVLVSTPGRLVDHIRNDESFSLQHLR 287
Query: 319 YLVLDEADRMLDMGFEPQIRRI----------------------VEGSDMPSVDNR---- 352
Y+V+DEADR+LD F+ + + + + +P +D
Sbjct: 288 YMVIDEADRLLDQSFQDWVDTVMMEISHPKCLQNKSNILDLDQNISPTFLPDIDTLLPYR 347
Query: 353 -----QTLMFSATFPSEIQHLASDFLKDYVFLSVGR----VGSTSENITQKILY-----V 398
Q L+FSAT + +AS L + + V V E I++ +
Sbjct: 348 LPSPLQKLVFSATLTRDPSKIASLKLHNPRLVLVQNKDMEVDDGGEIEDDAIVFSVPPTL 407
Query: 399 EDF------DKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFL------IMEGFKATAI 446
+++ +K L L+ + N L FV++ AA L L + + F
Sbjct: 408 QEYHVSVSSEKPILLYHLIHSKNLTNILCFVKSNEAAARLHRLLELIHESLNQSFSCGLF 467
Query: 447 HGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGR 506
++ ER++ +S F TG +LV + + ARG+D+ N +VIN+D P + YVHRIGR
Sbjct: 468 TSSLSRDERKKIISRFATGDLNLLVCSDLMARGIDVANTQNVINYDPPLSVRSYVHRIGR 527
Query: 507 TGRAGNTGVATTFFNRGNKNVAKELVSLL 535
T RAG G A T + +LV L
Sbjct: 528 TARAGREGFAWTLVQSHEGHHFSKLVKQL 556
>Hs20551983 [A] KOG0345 ATP-dependent RNA helicase
Length = 325
Score = 115 bits (288), Expect = 2e-25
Identities = 94/301 (31%), Positives = 148/301 (48%), Gaps = 31/301 (10%)
Query: 165 PLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSS 224
PL P +L ++ F TPVQ ++P+ +D+ A A TGSGKT F+ P+L
Sbjct: 15 PLHPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRR 74
Query: 225 GPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVY-GGASID 283
+KK A+I+ PTRELA QI + FT +++ GG +
Sbjct: 75 ----------EEKLKKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPG 124
Query: 284 NQIKQMR-YGCNLLVATPGRLTDLLERRYISL------ANVKYLVLDEADRMLDMGFEPQ 336
+++ + G N++VATPGRL D+ R+ L ++ LVLDEADR+LDMGFE
Sbjct: 125 EDVERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEAS 184
Query: 337 IRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKIL 396
I I+E +P R+T +FSAT E+++L L++ V +SV G + + +
Sbjct: 185 INTILE--FLPK--QRRTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQKTPS 240
Query: 397 YVEDF-------DKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFL--IMEGFKATAIH 447
+E++ +K + L+ L + L+F T + L +++G K IH
Sbjct: 241 RLENYYMVCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEVLVKGVKIMCIH 300
Query: 448 G 448
G
Sbjct: 301 G 301
>At5g19210 [J] KOG0327 Translation initiation factor 4F helicase subunit
(eIF-4A) and related helicases
Length = 430
Score = 113 bits (283), Expect = 8e-25
Identities = 84/291 (28%), Positives = 141/291 (47%), Gaps = 29/291 (9%)
Query: 245 AVILAPTRELATQIYDEAKKFTYRSWVKP-----MVVYGGASIDNQIKQMRYGCN-LLVA 298
AVI+ PTREL Q+ A+ +S + M + G ++ ++ +LVA
Sbjct: 105 AVIVVPTRELGMQVTKVARMLAAKSEIDVKGCTVMALLDGGTLRRHKSWLKAEPPAILVA 164
Query: 299 TPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEP-QIRRIVEGSDMPSVDNRQTLMF 357
T L +LE+ + +V+ LV+DE D + + +R+++ + S D RQT+
Sbjct: 165 TVASLCHMLEKHIFRIDSVRVLVVDEVDFLFYSSKQVGSVRKLL--TSFSSCDKRQTVFA 222
Query: 358 SATFPSEIQHLASDFL------KDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLL 411
SA+ P +H D + +D V + V + + + + E +K+ LL LL
Sbjct: 223 SASIPQH-KHFVHDCIQQKWTKRDVVHVHVSAIMPMPLCLLHRFVMCEKTNKHQVLLALL 281
Query: 412 AASNEGLTLIFV-----ETKRAADSLTDFLIMEGFKAT--------AIHGDRTQGERERA 458
+ +IFV ++K+A + + L+ME K + + GD R +
Sbjct: 282 ESDAPESAIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEGDMNFNSRAAS 341
Query: 459 LSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGR 509
L+ + G +LV+T +AARG+D+P TH+ NFDLP + DY+HR GR GR
Sbjct: 342 LTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAGRAGR 392
>7293348 [A] KOG0348 ATP-dependent RNA helicase
Length = 975
Score = 113 bits (283), Expect = 8e-25
Identities = 77/258 (29%), Positives = 132/258 (50%), Gaps = 26/258 (10%)
Query: 139 FDNYDDIPVEASGNDVPEPISE-------FHSPPLDPLLLDNIK-LARFTKPTPVQKYSV 190
FD D ++ G +P+ E + L P + N++ L + T VQ+ ++
Sbjct: 300 FDQSDVEALKQLGQRAVKPVKETIFTGSKISTLGLHPHAVKNLEDLLSIRELTSVQQKTI 359
Query: 191 PIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAP 250
P V G+D++ +QTGSGKT + P++ P +K A+++ P
Sbjct: 360 PEVLQGKDVLVRSQTGSGKTLAYALPLVELLQKQQPRIQ---------RKDGVLALVIVP 410
Query: 251 TRELATQIYDEAKKFTYR-SWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTD-LLE 308
TREL Q Y+ +K +W+ P + GG S ++ ++R G N+L+ TPGRL D LL
Sbjct: 411 TRELVMQTYELIQKLVKPYTWIVPGSLLGGESRKSEKARLRKGINILIGTPGRLVDHLLH 470
Query: 309 RRYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVD-------NRQTLMFSATF 361
L +++L+LDEADR+L++G+E ++++VE D + Q ++ SAT
Sbjct: 471 TASFKLTKLQFLILDEADRLLELGYERDVKQLVEAIDKQRAECEDKELPQLQRMLLSATL 530
Query: 362 PSEIQHLASDFLKDYVFL 379
S++Q LA LK+ +++
Sbjct: 531 TSQVQQLAGLTLKNPLYI 548
Score = 73.9 bits (180), Expect = 7e-13
Identities = 35/108 (32%), Positives = 56/108 (51%)
Query: 424 ETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIP 483
+ K +D D +++G + +HG TQ ER+ F+ + +L+AT V RG+D+P
Sbjct: 662 QEKGDSDDDGDIPLLQGLRFFKLHGSMTQTERQGVFRGFRDCASCVLLATDVVGRGIDVP 721
Query: 484 NVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKEL 531
++ V+ + P D+VHR+GRT RAG G A F + L
Sbjct: 722 DIKLVVQYTPPQTTADFVHRVGRTARAGRKGRAVLFLTPSEAQFVRHL 769
>CE27641 [A] KOG0349 Putative DEAD-box RNA helicase DDX1
Length = 752
Score = 111 bits (278), Expect = 3e-24
Identities = 92/341 (26%), Positives = 143/341 (40%), Gaps = 62/341 (18%)
Query: 232 AAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTY---RSWVKPMVVYGGASIDNQIKQ 288
AA I P VIL PTREL Q + + F ++ + + G +++ ++
Sbjct: 295 AAEQLSIDSSTPLCVILEPTRELVQQTFQNIQTFASVLDSPKIRCVTLAAGENMNQILRT 354
Query: 289 MRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRML--DMGFEPQIRRIVEGSDM 346
+ GC+++V TP R+ DL+ ++ N++++V+DE D+ L QI I +
Sbjct: 355 LETGCDIVVGTPSRVFDLIHTGKLATKNLQFVVIDEIDQFLAGKNNCAHQIESIFRVLPL 414
Query: 347 PSVDN--RQTLMFSAT---------------FPSEIQ----------------------- 366
+ D RQ + SAT FP I
Sbjct: 415 VAQDGTRRQVIACSATLHNFEVCRFADRHMSFPQWIDLKGADCVSADVHHVVCHVDASED 474
Query: 367 -----------HLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASN 415
HL D + D + G + ++ KIL K ++ + A
Sbjct: 475 KQWIRQMHQQVHLEDDHVHDGDQIRPGTTDKDTISLGTKIL------KGIYVVRAIHALQ 528
Query: 416 EGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAV 475
++F TK+ D + FL A +HGDR+ ER+ +L FK G LV + V
Sbjct: 529 MDKAIVFCRTKQQCDHMEHFLQQNNLSAACLHGDRSAEERQSSLEGFKKGIIRFLVCSDV 588
Query: 476 AARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVA 516
ARGLD+ V VI+ LP++ YVHRIGR GRA G++
Sbjct: 589 VARGLDVQGVPFVISVTLPDEKSMYVHRIGRVGRAERMGLS 629
>YNR038w [A] KOG0350 DEAD-box ATP-dependent RNA helicase
Length = 629
Score = 110 bits (275), Expect = 6e-24
Identities = 104/415 (25%), Positives = 190/415 (45%), Gaps = 71/415 (17%)
Query: 165 PLDPLLLDNI-KLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFS 223
P+ ++LD+I + FT + ++ I D++ A TGSGKT + P++ F
Sbjct: 199 PIQSIILDSILPVLNFTLNVSKRNFTRRI----GDILVNAATGSGKTLAYSIPIVQTLFK 254
Query: 224 SGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASID 283
I ++ +I+ PT+ L Q+Y K T + ++ A ++
Sbjct: 255 R------------QINRL--RCIIIVPTKLLINQVYTTLTKLTQGT----SLIVSIAKLE 296
Query: 284 NQIKQMRYGCN-----LLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIR 338
N +K + +L+ TPGRL D L + I+L N+K+L++DEADR+L+ F+
Sbjct: 297 NSLKDEHKKLSNLEPDILITTPGRLVDHLNMKSINLKNLKFLIIDEADRLLNQSFQGWCP 356
Query: 339 RIVEGSDMPSVD----NRQTLMFSATFPSEIQHL-------ASDFLK--DYVFLSVGRVG 385
+++ +D N ++FSAT + + L FLK D ++ ++
Sbjct: 357 KLMSHLKTDKLDTLPGNVIKMIFSATLTTNTEKLNGLNLYKPKLFLKQTDKLYQLPNKLN 416
Query: 386 STSENI-TQKILYVEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFL-------- 436
+ NI T K +Y + + LIFV++ ++ L+ L
Sbjct: 417 EFNINIPTAKSVYKPLILLYSICQFMAHSPIAAKILIFVKSNESSIRLSKLLQLICESRS 476
Query: 437 ---IMEGFKATA-----IHGDRTQGERERALSAF----KTGRATILVATAVAARGLDIPN 484
+++ + A ++ + ++ E ++ ++ F ++ TIL+ T + +RG+DI +
Sbjct: 477 QSSVLKNLQNLAVSINSVNSNNSKAENKKIVANFSHHSESAGITILITTDIMSRGIDIND 536
Query: 485 VTHVINFDLPNDIDDYVHRIGRTGRAGNTGVA---------TTFFNRGNKNVAKE 530
+T VIN+D P YVHR+GRT RA G A TFF+ NK++ ++
Sbjct: 537 ITQVINYDPPMSSQQYVHRVGRTARANELGSAYNLLVGRGERTFFDDLNKDLDRD 591
>Hs9506609 [A] KOG0340 ATP-dependent RNA helicase
Length = 257
Score = 109 bits (273), Expect = 1e-23
Identities = 78/250 (31%), Positives = 123/250 (49%), Gaps = 23/250 (9%)
Query: 166 LDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSG 225
L L++ + KPTPVQ +P + GRD + CA+TGSGKT F+ P+L + S
Sbjct: 9 LSSWLVEQCRQLGLKKPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPIL-QKLSED 67
Query: 226 PASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQ 285
P ++L PTRELA QI + + +K ++ GG + Q
Sbjct: 68 PYGI--------------FCLVLTPTRELAYQIAERFRVLGKPLGLKDCIIVGGMDMVAQ 113
Query: 286 IKQMRYGCNLLVATPGRLTD-LLERRYISLANVKYLVLDEADRMLDMG---FEPQIRRIV 341
++ ++++ATPGRL D L S+ +++LV+DEADR+L+ G F + I+
Sbjct: 114 ALELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAIL 173
Query: 342 EGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDF 401
+ +P+ RQTL+FSAT ++ L F ST E + Q+ L V +
Sbjct: 174 --AAVPA--RRQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVSTVEQLDQRYLLVPEK 229
Query: 402 DKNDTLLDLL 411
K+ L+ L+
Sbjct: 230 VKDAYLVHLI 239
>Hs17475661 [J] KOG0327 Translation initiation factor 4F helicase subunit
(eIF-4A) and related helicases
Length = 240
Score = 105 bits (263), Expect = 2e-22
Identities = 66/223 (29%), Positives = 111/223 (49%), Gaps = 54/223 (24%)
Query: 294 NLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQ 353
++++ TPGR++D+L RY+S +K VLDEAD ML F+ QI I + + N Q
Sbjct: 61 HIIMGTPGRVSDMLNWRYLSPKYIKMFVLDEADEMLSHRFKDQICDIFQMLN----SNTQ 116
Query: 354 TLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAA 413
++ SAT PS++ + F++D + + V +
Sbjct: 117 VVLLSATIPSDVLEVTKKFMRDPIRILVKK------------------------------ 146
Query: 414 SNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVAT 473
E LTL + F +A+HGD Q ER+ + +++G + +L+ T
Sbjct: 147 --EELTL------------------KDFTVSAMHGDMDQKERDVVMREYRSGSSRVLITT 186
Query: 474 AVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVA 516
+ RG+D+ ++ VIN+D P + ++Y+HRIGR G+ G+ GVA
Sbjct: 187 DLLPRGIDVQQLSLVINYDPPTNRENYIHRIGRGGQFGHKGVA 229
>ECU06g1250 [A] KOG0337 ATP-dependent RNA helicase
Length = 465
Score = 103 bits (256), Expect = 1e-21
Identities = 91/351 (25%), Positives = 151/351 (42%), Gaps = 67/351 (19%)
Query: 161 FHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSE 220
F + LD LL NI + PTP+Q+ ++P++ R LM +TGSGKT +L P +
Sbjct: 12 FKTMGLDYRLLRNIL---YEGPTPIQRKTIPLILERRSLMGVGRTGSGKTLCYLIPAIQR 68
Query: 221 SFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGA 280
+ S +++ PT+EL Q K+
Sbjct: 69 AISG------------------EKTLVIVPTKELVIQARRVLKRLA-------------R 97
Query: 281 SIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRI 340
I+ K + + TPG++ + + LV+DE DR+L+ EP ++ +
Sbjct: 98 GIEEAWKLIE------ICTPGKIEGM---------SADMLVVDEIDRILE---EPSLKSV 139
Query: 341 VEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVED 400
+ + + Q + FSAT P ++ ++ + +E + Y+
Sbjct: 140 FDRINESL--SCQKVFFSATLPDHPLNMKVVEIETRI----------NETVKHFFFYIPS 187
Query: 401 FDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALS 460
K LL +L + + T++F TK A + L + L F++ I+ R
Sbjct: 188 ESKEAALLRILDKTRK--TIVFAATKYAVELLLEILNKNNFESRGIYSSMDDEARRANFR 245
Query: 461 AFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAG 511
F T + +ILV T VAARGLDIP + V+N+DL D ++HR+GR G
Sbjct: 246 DFNTSKFSILVVTDVAARGLDIPYLDTVVNYDL-CDERTFLHRVGRVRGMG 295
>SPCC1494.06c [A] KOG0346 RNA helicase
Length = 595
Score = 102 bits (253), Expect = 2e-21
Identities = 97/350 (27%), Positives = 159/350 (44%), Gaps = 20/350 (5%)
Query: 147 VEASGNDVPEPISE--FHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQ 204
+E SG + E SE F LDP L I F KPT VQ ++P+ G+DL+A A+
Sbjct: 1 MEKSGG-IREESSEKTFSDFNLDPRLQRAIHKCEFEKPTSVQSETIPLALEGKDLVAQAR 59
Query: 205 TGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKK 264
TGSGKT +L P+L + + ++ A++L PTRELA Q+Y+ +K
Sbjct: 60 TGSGKTAAYLIPILELLLKQKQIDENQ-------RGIF--ALLLVPTRELAQQVYNVLEK 110
Query: 265 FT--YRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVL 322
T ++ + V +S Q + ++++ATP R + + L +K+LV+
Sbjct: 111 LTAFCSKHIRFINVATNSSDTVQRPLLLDLPDIVIATPSRCVVHVASGVLPLDKLKFLVI 170
Query: 323 DEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVG 382
DEAD ML G+ ++ + +P Q+ + SAT I L ++ L+V
Sbjct: 171 DEADLMLSFGYNEDMKTL--SRSLPR--GTQSFLMSATLSKNIASLQKLVCRNPFILAV- 225
Query: 383 RVGSTSENITQKILYVEDFDKNDTLLDLLAAS-NEGLTLIFVETKRAADSLTDFLIMEGF 441
+ S +TQ ++ + DK LL +G LIFV L FL G
Sbjct: 226 KDKEASGKLTQYVVKCSEQDKFLLAYILLKLRLIKGKILIFVNEINRCYRLKLFLEQFGL 285
Query: 442 KATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINF 491
K+ ++ + R L + G I++AT + +I + + ++F
Sbjct: 286 KSLVLNSELPVNSRLHILEQYNKGLYQIIIATDESGMMGEIEELENNVDF 335
Score = 57.4 bits (137), Expect = 6e-08
Identities = 25/43 (58%), Positives = 31/43 (71%)
Query: 477 ARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTF 519
ARGLD NV V+NFD+P++ Y+HRIGRT RAG G A +F
Sbjct: 387 ARGLDFENVACVLNFDMPSNTKSYIHRIGRTARAGKPGTAMSF 429
>At4g15850 [A] KOG0350 DEAD-box ATP-dependent RNA helicase
Length = 474
Score = 100 bits (250), Expect = 5e-21
Identities = 103/388 (26%), Positives = 163/388 (41%), Gaps = 80/388 (20%)
Query: 197 RDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELAT 256
RD+ + TGSGKT + P++ + +S P A +++ PTR+LA
Sbjct: 25 RDICVNSPTGSGKTLSYALPIV-QLLASRPVRCLRA-------------LVVLPTRDLAL 70
Query: 257 QIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQM---------------------RYGCNL 295
Q+ D + G +SI +I Q+ ++
Sbjct: 71 QVKDVFDAIAPAVGLSVGSAVGQSSIAGEISQLIKTPKLDAGICYDPDDLSQNLESAVDI 130
Query: 296 LVATPGRLTDLLER-RYISLANVKYLVLDEADRMLDMGFE---PQIRRIVEGSD------ 345
LVATPGRL D + + +L +++YLV+DE DR+L ++ P + ++ + SD
Sbjct: 131 LVATPGRLMDHINNTKGFTLEHLRYLVVDETDRLLREAYQSWLPTVLQLTQTSDDSLFPS 190
Query: 346 ----MPSVDN------RQT---------------LMFSATFPSEIQHLASDFLKDYVFLS 380
+PS RQ+ ++ SAT + L L +F++
Sbjct: 191 FTPFVPSAFGSLQTVRRQSVERGFKGKPYPRLVKMVLSATLTQDPSKLIQLDLHHPLFMT 250
Query: 381 VGRVGSTSENITQKI----LYVEDFDKNDTLLDLLAASNEGLTLIF---VETKRAADSLT 433
G + + +K+ L E K L+ LL + +IF VET R L
Sbjct: 251 TG---GSRYRLPEKLECLRLICETGMKPVYLVALLKSWEGEKCIIFTSSVETTRRLCKLL 307
Query: 434 DFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDL 493
+F KA G Q R + L AF+ G +LVA+ RG+D+ VT+VIN+D+
Sbjct: 308 NFFGDPKIKAKEYSGGLNQSLRSKELKAFRKGDIQVLVASDALTRGMDVKGVTNVINYDM 367
Query: 494 PNDIDDYVHRIGRTGRAGNTGVATTFFN 521
P ++HR GRT RAG G T +
Sbjct: 368 PPFAKTFIHRAGRTARAGQAGRCFTLLS 395
>CE15167 [A] KOG0335 ATP-dependent RNA helicase
Length = 340
Score = 99.4 bits (246), Expect = 1e-20
Identities = 83/331 (25%), Positives = 146/331 (44%), Gaps = 35/331 (10%)
Query: 185 VQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPT 244
VQ+ S+ ++ GR L+ A TG GKT FL P + + + ++ E+ K P+
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALENRQSNCFEST------KPSPS 72
Query: 245 AVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYG---CNLLVATPG 301
+I+A T L Q+++ + + + ID + + C++ T G
Sbjct: 73 ILIMASTSALVDQLFNRCELILGLQCMDNVEPIRDIKIDKLVANHPFTKGQCDIAFCTIG 132
Query: 302 RLTDLLERRYISLANVKYLVLDEADRMLD-MGFEPQIRRIVEGSDMPSVDNRQTLMFSAT 360
+L +E + L N+K ++LDEAD+M+D F P I I++ +++N Q+ FSAT
Sbjct: 133 KLKATIECGDVCLDNLKTIILDEADKMIDNCAFVPDINWILDQLKEENLENLQSCFFSAT 192
Query: 361 FPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNEGLTL 420
+ G+ + + Q + ED D NE +
Sbjct: 193 YNKNAN------------------GTIALTVLQMRMLGEDDPCKD------GPYNETIA- 227
Query: 421 IFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGL 480
IF ET + +T L G+ + T+ ++ ++ + + +V T + ARG+
Sbjct: 228 IFCETVQRVTQVTMTLRQLGYNFKPVCSMITKNQQLVTVNDLEFRKIHGVVCTNILARGI 287
Query: 481 DIPNVTHVINFDLPNDIDDYVHRIGRTGRAG 511
D+ +V H I ++ D D Y HRIGR +G
Sbjct: 288 DVSSVKHTIIMEMSADFDTYKHRIGRVSISG 318
>Hs20548087 [J] KOG0327 Translation initiation factor 4F helicase subunit
(eIF-4A) and related helicases
Length = 344
Score = 99.0 bits (245), Expect = 2e-20
Identities = 83/310 (26%), Positives = 147/310 (46%), Gaps = 35/310 (11%)
Query: 147 VEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTG 206
+E++ N++ + F L LL I KP+ +Q+ ++ G ++ AQ+G
Sbjct: 68 IESNWNEI---VDSFDDMNLLESLLHGIYAYGSEKPSAIQQRAILPCIRGYVVIVQAQSG 124
Query: 207 SGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFT 266
+GK F +L + A + I+KV +A + +A T
Sbjct: 125 TGKMATFSISILHQ------IELDVKATQALIQKVV-----------IALGDHMDASCHT 167
Query: 267 YRSWVKPMVVYGGASIDNQIKQMRYGC-NLLVATPGRLTDLLERRYISLANVKYLVLDEA 325
GG ++ ++++++ +++V TPG + D+L RY+S +K VLD+
Sbjct: 168 ---------CIGGTNVHAEVQKLQMEAPHIIVGTPGHVFDMLNWRYLSPKYIKMFVLDKT 218
Query: 326 DRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVG 385
D ML GF+ QI I + + N Q ++ SAT PS++ + F+++++++ V +
Sbjct: 219 DEMLSHGFKDQIYGIFQELN----SNTQVVLPSATMPSDVLEVTKKFMREHIWILVKKEE 274
Query: 386 STSENITQKILYVEDFD-KNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKAT 444
T E I Q + +E + K DTL DL +IF+ T+R AD LT + + F +
Sbjct: 275 LTLEGICQFYINMEREEWKLDTLGDLYETLTIAQAVIFLNTRRKADWLTKKMHAQDFTVS 334
Query: 445 AIHGDRTQGE 454
A+HGD Q E
Sbjct: 335 AMHGDMDQKE 344
>CE28975 [A] KOG0335 ATP-dependent RNA helicase
Length = 520
Score = 99.0 bits (245), Expect = 2e-20
Identities = 99/419 (23%), Positives = 174/419 (40%), Gaps = 47/419 (11%)
Query: 167 DPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGP 226
D L N++ + VQ+ S+ + R L+ A TG GKT FL P + + P
Sbjct: 100 DHRLAANLQRIKVHILNAVQQKSIQAIRDRRGLLVDAPTGIGKTYAFLIPAIEIALRERP 159
Query: 227 ASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQI 286
T + S PT +ILA T L Q+++ + ++ ++ I+ +
Sbjct: 160 LLTNISTTPS------PTILILANTNSLVEQLFNRCEVLLGLIDMEDIIPIRDIKIEKLV 213
Query: 287 KQMRYG---CNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMG-FEPQIRRIVE 342
++ C++ T G+L +E + I L N+K ++LDE+D+M+D+ F I +++
Sbjct: 214 ASYQFTKDQCDIAFCTMGKLKASIEDKTILLDNLKMMILDESDKMIDIACFGNDIDWVLD 273
Query: 343 GSDMPSVDNRQTLMFSATF---------------------PSEIQHLASDFLKDYVFLSV 381
+ N Q+ FSA+ P + H L Y+ V
Sbjct: 274 QLQEDVLRNLQSCFFSASHNRNEDGSIALTSRQSRMLGENPWSLIHCPR--LPGYITQRV 331
Query: 382 GRVGSTSENITQKILYVEDFDKNDTLLD----LLAASNEG----LTLIFVETKRAADSLT 433
R+G N ++ + LLD + ++ EG IF ET +T
Sbjct: 332 IRIGGQRVNDIHSNPWIVKMNIICKLLDDDLKEMGSTKEGPWKHTIAIFCETVSRVIQVT 391
Query: 434 DFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDL 493
L G+ + + ++ L+ + +V T + +RG+D+ +V I ++
Sbjct: 392 MALRQMGYNFKPVCSSVLKQQQAITLNDLEFCNIHGVVCTNIMSRGIDVSSVKQTIIMEM 451
Query: 494 PNDIDDYVHRIGRTGRAGNTGVATT------FFNRGNKNVAKELVSLLSEANQEVPSFL 546
D Y+HRIGR GR G G AT F N+ ++L S + E + +P++L
Sbjct: 452 STDFPSYMHRIGRVGRDGCGGRATVLIDEHHLFGGPMSNIIEQLCSFMLECEETLPNWL 510
>CE00456 [A] KOG0350 DEAD-box ATP-dependent RNA helicase
Length = 696
Score = 99.0 bits (245), Expect = 2e-20
Identities = 107/386 (27%), Positives = 168/386 (42%), Gaps = 66/386 (17%)
Query: 197 RDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELAT 256
RD+ A TGSGKT ++ PVL AA S K+ AVIL P + L
Sbjct: 260 RDVAIAAPTGSGKTICYVLPVL-------------AAVGSKPSKILQ-AVILVPVQTLVA 305
Query: 257 QIYDEAKKFTYRSWVKPMVVYGGAS-IDNQIKQMRYG-CNLLVATPGRLTDLLERRY--- 311
QI DE K++ S V +V GA+ + + +Q+ N++VATP RL L +
Sbjct: 306 QIVDEFKRWNDESGVAKVVSLSGANDFEKEARQLASDPPNVIVATPARLVQHLTSKIPPP 365
Query: 312 ISLANVKYLVLDEADRM--------LDM------GFE--PQIRRIVEGSDMPSVDNRQTL 355
I L+ +++L++DEADRM LD+ G E ++ I+ P Q +
Sbjct: 366 IDLSKLRFLIVDEADRMGKLMREEWLDLVEFLCGGMERVACLKDIIRQRRAP-----QKI 420
Query: 356 MFSATFPSEIQHL-ASDFLKDYVFLSV------------------GRVGSTSENITQKIL 396
+ SAT +++ L + K +F + GR+ S +I+ +++
Sbjct: 421 VLSATLSKDVEELHLWNLFKPRLFSATAVSVKDITSGIPQVDHVSGRLALPS-SISHRLV 479
Query: 397 YVEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDF---LIMEGFKATAIHGDRTQG 453
+ + + + TLIFV +++ L L + F+
Sbjct: 480 VTDPKFHPLAVYQQITRNKFNRTLIFVNEVSSSNRLAHVLKELCKDQFEVDYFTAQLFGK 539
Query: 454 ERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNT 513
R + L F +L+ + V ARG D+ V VIN++LP D +VHR GRTGRAG
Sbjct: 540 RRYKMLEKFNKNENRVLICSDVLARGTDLNKVDCVINYNLPADDKLFVHRAGRTGRAGQD 599
Query: 514 GVATTFFNRGNKNVAKELVSLLSEAN 539
G + G+K + V +L N
Sbjct: 600 GYVISV---GDKESKRLFVKMLKVTN 622
>Hs21040373 [A] KOG0329 ATP-dependent RNA helicase
Length = 316
Score = 97.1 bits (240), Expect = 7e-20
Identities = 74/230 (32%), Positives = 114/230 (49%), Gaps = 20/230 (8%)
Query: 148 EASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGS 207
+ G+ V S F L P LL I F P+ VQ +P G D++ A++G
Sbjct: 33 DIKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGM 92
Query: 208 GKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFT- 266
GKT F+ L + N + T +++ TRELA QI E ++F+
Sbjct: 93 GKTAVFVLATLQQI----------EPVNGQV-----TVLVMCHTRELAFQISKEYERFSK 137
Query: 267 YRSWVKPMVVYGGASIDNQIKQMRYGC-NLLVATPGRLTDLLERRYISLANVKYLVLDEA 325
Y VK V +GG SI + ++ C +++V TPGR+ L+ R SL NVK+ VLDE
Sbjct: 138 YMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNVKHFVLDEC 197
Query: 326 DRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKD 375
D+ML+ + +RR V+ + +Q +MFSAT +I+ + F++D
Sbjct: 198 DKMLE---QLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFMQD 244
>7294064 [A] KOG0350 DEAD-box ATP-dependent RNA helicase
Length = 687
Score = 94.4 bits (233), Expect = 5e-19
Identities = 109/437 (24%), Positives = 186/437 (41%), Gaps = 89/437 (20%)
Query: 174 IKLARFTKPTPVQKYSVPIVAAG---------RDLMACAQTGSGKTGGFLFPVLSESFSS 224
+K + + PVQK +P + RD+ A TGSGKT F P++
Sbjct: 152 LKQMKIKRLFPVQKQVIPWILEAHAKPPPFRPRDICVSAPTGSGKTLAFAIPIV------ 205
Query: 225 GPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDN 284
+ KV A+++ P ELA Q+Y + ++ ++ ++ +++
Sbjct: 206 ------QLLSQRVDCKV--RALVVLPVAELALQVYRVISELCSKTELEVCLLSKQHKLED 257
Query: 285 -------QIKQMRYG-CNLLVATPGRLTDLLER-RYISLANVKYLVLDEADRMLDMGFEP 335
Q K Y +++V TPGRL D L + L ++K+LV+DEADR++D F+
Sbjct: 258 EQEKLVEQYKGKYYSKADIVVTTPGRLVDHLHATKGFCLKSLKFLVIDEADRIMDAVFQN 317
Query: 336 QIR-----------RIVEGSDMPSV---------DNRQTLMFSATF---PSEIQHL---- 368
+ +++ G+ P L+FSAT P ++Q L
Sbjct: 318 WLYHLDSHVKETTDQLLAGTQAPLCYAELQASFGKQPHKLLFSATLSQDPEKLQDLRLFQ 377
Query: 369 ---------------ASDFLKDYVFLS-----VGRVGSTSENITQKILYVEDFDKNDTLL 408
A++ D L+ VGR + +E +T++ E K T+
Sbjct: 378 PRLFATVLTMPVLKDATEEGADTEALTDPGQFVGRYTTPAE-LTEQYCVTELRLKPLTVF 436
Query: 409 DLLAASNEGLTLIFVETKRAADSLTDFLIMEGF-----KATAIHGDRTQGERERALSAFK 463
L+ L F + A LT F++ F K + + G+ + R L F
Sbjct: 437 ALVEKYKWKRFLCFTNSSDQATRLT-FVLKVLFQKYSTKVSELSGNLSAKVRNERLRDFA 495
Query: 464 TGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRG 523
G+ L+ + ARG+D+ +V V++++ P I Y+HR+GRT RAG G A T
Sbjct: 496 AGKINGLICSDALARGIDVADVDVVLSYETPRHITTYIHRVGRTARAGRKGTAVTVLTEQ 555
Query: 524 NKNVAKELVSLLSEANQ 540
+ + K+ +LS+AN+
Sbjct: 556 DMTLFKK---ILSDANK 569
>ECU07g1060 [A] KOG0344 ATP-dependent RNA helicase
Length = 416
Score = 94.0 bits (232), Expect = 6e-19
Identities = 102/408 (25%), Positives = 172/408 (42%), Gaps = 77/408 (18%)
Query: 179 FTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYI 238
F P QK +P +++ A TGSGKT + P++ A G S
Sbjct: 45 FDSPLLTQKVVIPYFLKKTNVIVQAFTGSGKTLSYCLPLVEM-----------ARGRSLF 93
Query: 239 KKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGA-----------------S 281
IL P + L Q+Y ++ + +K + VYG +
Sbjct: 94 ------GAILVPGKPLVRQVYRVVREIKHEG-LKVVGVYGDGREDFLVEEGEKGELVQKA 146
Query: 282 IDNQIKQ-----MRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLD---MGF 333
ID+++++ +R +L+ TP + L+ I NV +LV+DEAD +++ +G
Sbjct: 147 IDDKMRERIAESLRASARVLIGTPRSVLGLMSMSEIR--NVTHLVIDEADLLINPETVGV 204
Query: 334 EPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGS-TSENIT 392
I ++E D+ FSAT + +YV + V S T +
Sbjct: 205 FASILSVIEMEDI------HISCFSAT------------MNEYVSEVIETVKSITKIRVV 246
Query: 393 QKILYVEDFD-------KNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATA 445
K L +F K+ +LL ++A E TLIFV+ ++ ++L+ L +A
Sbjct: 247 SKRLIDHEFVFGTSRKIKHLSLLQIIADGIESPTLIFVKDEKTGEALSMLL-----GKSA 301
Query: 446 IHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIG 505
++ + +G E L F+ + L T +RG+D N+ VIN+DLP+ +VHRIG
Sbjct: 302 VYREDQEGSGE-VLDGFRLKKIWYLFTTDSLSRGIDFYNIRSVINYDLPSTKTQFVHRIG 360
Query: 506 RTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFLTTIMREA 553
R R T ++ + + L E EVP +T I+ ++
Sbjct: 361 RINRNCQGQKIYTIYSSEDFGRIGVVAEFLEENGHEVPKHITRIIEKS 408
>YGL064c [A] KOG0335 ATP-dependent RNA helicase
Length = 561
Score = 88.6 bits (218), Expect = 3e-17
Identities = 104/436 (23%), Positives = 172/436 (38%), Gaps = 96/436 (22%)
Query: 182 PTPVQKYSVPIVAAGRDLM--------ACAQTGSGKTGGFLFPVLSESFSSGPASTPEAA 233
P+P+Q +V I ++LM A+TGSGKT +L P++ + TPE
Sbjct: 137 PSPIQ--TVAIKRISKNLMDPKLQIHAIAAETGSGKTMAYLIPLI-DYLKRQELETPEL- 192
Query: 234 GNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGC 293
+ K V ++IL PT EL Q+Y+ K + S + ++ ++
Sbjct: 193 WETLRKNVLIRSIILVPTHELVDQVYETVSKTKTLLGLNSFKWDKATSYRDLLENIKNRI 252
Query: 294 NLLVATPGRLTDLLERRYIS-----LANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPS 348
++LV TPG+L +L R I+ L+ V ++VLDEAD +LD + + ++ +P+
Sbjct: 253 DILVTTPGKLLNLFSIRMITRPDKVLSKVGFVVLDEADTLLDRSWLEETHSAIK--RIPN 310
Query: 349 VDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLL 408
+++ + SAT P E V + R+ K+ + DF ++ L
Sbjct: 311 INH--LIFCSATIPQEFNKTMQRLFPTVVPIMTPRL--------HKLPFALDFKVINSAL 360
Query: 409 D-------------LLAASN-------EGLTLIFVETKRAADSLTDFLIME-GFKATAIH 447
L A SN E +IFV K+ + + L + G A +
Sbjct: 361 SPFKGSKIKALAQTLYAISNDDTEPGFEKRCIIFVNEKKNVPEIVNLLNKKFGHNAIGLT 420
Query: 448 GDRTQGERERALSAF----------------------------------------KTGRA 467
G+ T ER + F G A
Sbjct: 421 GEDTFEERSEKIMPFLSPPRPLSEVVAQSTSPPTSLKKFEIPDSNIVIGKLKNTNSNGTA 480
Query: 468 T------ILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFN 521
+LV T + ARGL+ V +V+ +D+P D +HR+GRT R G +
Sbjct: 481 PSNKSLHVLVTTDLMARGLNFKGVRNVVLYDVPKTSIDLIHRVGRTARMKQGGRVFMLTD 540
Query: 522 RGNKNVAKELVSLLSE 537
K+ AK L ++ +
Sbjct: 541 SKTKSWAKALPKIIKK 556
>At1g59990 [A] KOG0333 U5 snRNP-like RNA helicase subunit
Length = 581
Score = 88.2 bits (217), Expect = 3e-17
Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 8/188 (4%)
Query: 351 NRQTLMFSATFPSEIQHLASDFLK----DYVFLSVGRVGSTSENITQKILYVEDFDKNDT 406
++Q + +AT P + A LK D V++S + S + QK + V + D
Sbjct: 352 SKQYIFIAATLPVNGKKTAGGILKHMFQDAVWVSGNFLHRNSPRLKQKWVEVTVDSQVDA 411
Query: 407 LLDLLAASNEG---LTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFK 463
L++ + +N T++F T A +++ D L + H + ER L+ F+
Sbjct: 412 LIEAVKNNNNTNTERTMVFANTVEAVEAVADILEKASIQCYRYHKNHKLDERANILADFR 471
Query: 464 TGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRG 523
+ V T AARG+D+PNV+HVI D + D++HRIGRT RAG G T+ +
Sbjct: 472 E-TGGVFVCTDAAARGVDVPNVSHVIQADFASSAVDFLHRIGRTARAGQYGTVTSLYTEA 530
Query: 524 NKNVAKEL 531
N+++ + +
Sbjct: 531 NRDLVEAI 538
>Hs22044561 [A] KOG0331 ATP-dependent RNA helicase
Length = 964
Score = 70.5 bits (171), Expect = 7e-12
Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 6/117 (5%)
Query: 413 ASNEGLTLIFVETKRAADSLTDFLIMEGFKATA--IHGDRTQGERERALSAFKTGRATIL 470
+ +EG +IF ET++ ++T+ + K A +HGD Q +RE L F+ +L
Sbjct: 563 SGSEGRAIIFCETRK---NVTEMAMNPHIKQNAQCLHGDIAQSQREITLKGFREDSFKVL 619
Query: 471 VATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNV 527
VAT VAA L IP V VI P D++ +HR G TGRAG G F N+ + +
Sbjct: 620 VATNVAAHSLHIPEVDLVIQHSPPQDVEARIHRSGCTGRAGQ-GFVYVFINQEKEEI 675
>SPAC212.11 [L] KOG0351 ATP-dependent DNA helicase
Length = 1887
Score = 69.3 bits (168), Expect = 2e-11
Identities = 88/374 (23%), Positives = 154/374 (40%), Gaps = 43/374 (11%)
Query: 198 DLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQ 257
+L+ TG GK+ FL P L E TP N + P +++ +++ +
Sbjct: 1208 NLITVLPTGGGKSLSFLIPALIEK----KRQTPGKVMNMVTLVLVP---MMSLRQDMMLR 1260
Query: 258 IYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANV 317
+ ++ +W V +++ Q+ + ++ LT+ R + SLA +
Sbjct: 1261 VNEKGLLVCSGNWTAFKDVR--LTLETQLPDL-----FILTYESALTNSGLRFFESLATL 1313
Query: 318 KYL---VLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASD-FL 373
L V+DEA +L G R + + S + SATFP +++ +A F
Sbjct: 1314 GRLARVVIDEAHLLLTSG---AWRTALSRASRLSGLYAPLHLLSATFPRQLEMVARQTFC 1370
Query: 374 KDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAA-------SNEGLTLIFVETK 426
++ L + ENI ++ +D + LLDL +G +IF TK
Sbjct: 1371 TNFYVLR--ETSTARENI---FYFLHPYDNTEFLLDLRTLMKRTKVFEGDGRAIIFCRTK 1425
Query: 427 RAADSLTDFLIMEGFKA----TAIHGDRTQGERERALSAFKT--GRATILVATAVAARGL 480
+ + + L A T GD + ER+ AF+ G+ I++AT G+
Sbjct: 1426 KDVEYIHRRLHQSDLFAHTHVTIYTGDVSDEERQMNFDAFRNANGKTRIMIATKAFGLGI 1485
Query: 481 DIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKN----VAKELVSLLS 536
+ V V+++ LP DYV GR GR G +A F+ + + V + + L+
Sbjct: 1486 NYMGVRLVVHYGLPASSMDYVQETGRAGRDGKYAIAALFYEKYDSTWSSYVEDSMKNFLN 1545
Query: 537 EANQEVPSFLTTIM 550
+ V SFL + M
Sbjct: 1546 DNTMCVRSFLASEM 1559
>Hs22070384 [A] KOG0342 ATP-dependent RNA helicase pitchoune
Length = 447
Score = 63.5 bits (153), Expect = 9e-10
Identities = 45/136 (33%), Positives = 76/136 (55%), Gaps = 25/136 (18%)
Query: 278 GGASIDNQIKQMRYGCNLLVATPGRLTDLLERRY-ISLANVKYLVLDEADRMLDMGFEPQ 336
GG++ + ++ G N++VAT GRL D ++ N++ LV+DEADR+LD+GFE +
Sbjct: 2 GGSNRSAEAWKLANGINIIVATSGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEE 61
Query: 337 IRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKIL 396
+++I++ + +RQT++FSAT +++ LA LK ++ L
Sbjct: 62 LKQIIK----LLLTHRQTMLFSATQTQKVEDLARISLK------------------KEPL 99
Query: 397 YVEDFD--KNDTLLDL 410
YV D D N+T+ DL
Sbjct: 100 YVGDDDDNANETVADL 115
>7299503 [L] KOG0351 ATP-dependent DNA helicase
Length = 1487
Score = 60.5 bits (145), Expect = 8e-09
Identities = 74/360 (20%), Positives = 139/360 (38%), Gaps = 58/360 (16%)
Query: 184 PVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFP-VLSESFSSGPASTPEAAGNSYIKKVY 242
P Q + G D TG GK+ + P +L+E +
Sbjct: 740 PNQLQVINATLLGNDCFVLMPTGGGKSLCYQLPAILTEGVT------------------- 780
Query: 243 PTAVILAPTRELATQIYDEAKKFTY-----------RSWVKPMVVYGGASIDNQIKQMRY 291
++++P + L I+D+ K + M +Y + ++ Y
Sbjct: 781 ---IVISPLKSL---IFDQINKLASLDICAKSLSGEQKMADVMAIYRDLESQPPMVKLLY 834
Query: 292 GCNLLVATPGRLTDLLE----RRYISLANVKYLVLDEADRMLDMG--FEPQIRRIVEGSD 345
+++ R D L+ YIS V+DEA + G F P +++ G
Sbjct: 835 VTPEKISSSARFQDTLDTLNSNNYISR-----FVIDEAHCVSQWGHDFRPDYKKL--GVL 887
Query: 346 MPSVDNRQTLMFSATFPSEIQH--LASDFLKDYV-FLSVGRVGSTSENITQKILYVEDFD 402
N T+ +AT ++ LA LK+ FLS N+ ++L +
Sbjct: 888 KKRFPNVPTIALTATATPRVRLDILAQLNLKNCKWFLS----SFNRSNLRYRVLPKKGVS 943
Query: 403 KNDTLLDLLAASNEGLT-LIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSA 461
D + + + + + +I+ +++ D + + +G +A + H T +RE
Sbjct: 944 TLDDISRYIRSKPQHFSGIIYCLSRKECDETSKKMCKDGVRAVSYHAGLTDTDRESRQKD 1003
Query: 462 FKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFN 521
+ TG+ ++ AT G+D P+V V+++ LP I+ Y GR GR G+ ++N
Sbjct: 1004 WLTGKMRVICATVAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDGDVADCILYYN 1063
>Hs22045464 [A] KOG0343 RNA Helicase
Length = 597
Score = 59.3 bits (142), Expect = 2e-08
Identities = 31/81 (38%), Positives = 41/81 (50%)
Query: 452 QGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAG 511
Q R + F RA +L A+ VAARGLD P V + FD P D + Y+HR GRT R
Sbjct: 218 QMRRMEVYNEFVRKRAAVLFASDVAARGLDFPAVNWALQFDCPEDANTYIHRAGRTARYK 277
Query: 512 NTGVATTFFNRGNKNVAKELV 532
G A K + ++L+
Sbjct: 278 EDGEALLILLASEKAIVQQLL 298
Score = 53.1 bits (126), Expect = 1e-06
Identities = 42/131 (32%), Positives = 73/131 (55%), Gaps = 10/131 (7%)
Query: 275 VVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLAN-VKYLVLDEADRMLDMGF 333
++ GG + ++ +++ N+LV PGRL ++ A + LVLDEA R+LD+GF
Sbjct: 115 LIIGGKYLKHEAERIN-NINILVCAPGRLLQHMDETVSFHATALLMLVLDEAYRILDVGF 173
Query: 334 EPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLK--DYVFLSVGRVGSTSENI 391
+ I+E ++P RQTL+FSAT ++ LA LK +YV+ + R+ +E +
Sbjct: 174 ADTMNAIIE--NLPK--KRQTLLFSATQTISVKDLARLSLKNTEYVWQQMRRMEVYNEFV 229
Query: 392 TQK--ILYVED 400
++ +L+ D
Sbjct: 230 RKRAAVLFASD 240
>YMR190c [L] KOG0351 ATP-dependent DNA helicase
Length = 1447
Score = 57.4 bits (137), Expect = 6e-08
Identities = 71/358 (19%), Positives = 139/358 (37%), Gaps = 53/358 (14%)
Query: 184 PVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYP 243
P Q +V G+D+ TG GK+ + P + +S K +
Sbjct: 681 PNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAVVKS-----------------GKTHG 723
Query: 244 TAVILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASID---------NQIKQMRYGCN 294
T ++++P L + + D+ + ++ M G + N + + Y
Sbjct: 724 TTIVISP---LISLMQDQVEHLLNKNIKASMFSSRGTAEQRRQTFNLFINGLLDLVYISP 780
Query: 295 LLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMG--FEPQIRRIV----EGSDMPS 348
+++ + + R Y + +V+DEA + + G F P + + E D+P
Sbjct: 781 EMISASEQCKRAISRLYAD-GKLARIVVDEAHCVSNWGHDFRPDYKELKFFKREYPDIPM 839
Query: 349 VDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKN-DTL 407
+ L +A+ + + + LK+ VFL ++ + LY E K +T+
Sbjct: 840 I----ALTATASEQVRMDIIHNLELKEPVFLK--------QSFNRTNLYYEVNKKTKNTI 887
Query: 408 LDLLAASNEGLT----LIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFK 463
++ A +I+ +K++ + + + G K H ER A++
Sbjct: 888 FEICDAVKSRFKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQKAWQ 947
Query: 464 TGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFN 521
++ AT G+D P+V V +F +P ++ Y GR GR GN T+F+
Sbjct: 948 ADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFS 1005
>At1g27880 [L] KOG0351 ATP-dependent DNA helicase
Length = 941
Score = 54.3 bits (129), Expect = 5e-07
Identities = 32/130 (24%), Positives = 56/130 (42%)
Query: 420 LIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARG 479
+++ + + D ++ +L A H +R R +F + + ++VAT G
Sbjct: 509 IVYCKFQYETDMISKYLRDNNINAKGYHSGLPAKDRVRIQESFCSNKIRVVVATVAFGMG 568
Query: 480 LDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEAN 539
LD +V VI+F +P +++YV IGR GR G F++ + L
Sbjct: 569 LDKGDVGAVIHFSVPGSMEEYVQEIGRAGRDGRLSYCHLFYDNDTYLKLRSLAHSDGVDE 628
Query: 540 QEVPSFLTTI 549
V FLT +
Sbjct: 629 YAVGKFLTHV 638
>7294377 [L] KOG0352 ATP-dependent DNA helicase
Length = 1058
Score = 54.3 bits (129), Expect = 5e-07
Identities = 29/106 (27%), Positives = 48/106 (44%)
Query: 417 GLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVA 476
G +++ T+ + + + +G A A H GER A+ G I+ AT
Sbjct: 257 GCGIVYCRTRDQVERMAIGVTKQGIGAVAYHAGLKTGERTEVQEAWMRGDQPIICATNSF 316
Query: 477 ARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNR 522
G+D P+V VI++D+P ++ Y GR GR G ++ R
Sbjct: 317 GMGVDKPSVRFVIHWDVPQNVAAYYQESGRAGRDGLQSYCRLYYGR 362
>Hs4759030 [L] KOG0351 ATP-dependent DNA helicase
Length = 1208
Score = 53.1 bits (126), Expect = 1e-06
Identities = 27/69 (39%), Positives = 35/69 (50%)
Query: 443 ATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVH 502
A A H ER R AF G+ ++VAT GLD P+V V++ LP + YV
Sbjct: 741 AEAYHAGMCSRERRRVQRAFMQGQLRVVVATVAFGMGLDRPDVRAVLHLGLPPSFESYVQ 800
Query: 503 RIGRTGRAG 511
+GR GR G
Sbjct: 801 AVGRAGRDG 809
>ECU07g1130 [L] KOG0351 ATP-dependent DNA helicase
Length = 766
Score = 53.1 bits (126), Expect = 1e-06
Identities = 72/348 (20%), Positives = 139/348 (39%), Gaps = 32/348 (9%)
Query: 186 QKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTA 245
Q+ + +G+D+ TG GK+ + P L + S + I+ +
Sbjct: 242 QREVIQACLSGKDVFVLMPTGGGKSICYQLPALVYDGITIVVSPLLSLVQDQIRNLLQKG 301
Query: 246 VILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTD 305
++ P + + + + ++ V GG D I ++ Y L+A G D
Sbjct: 302 ILALP---INSNLSRAERDLVFQ-------VLGG---DELICKIFYVTPELIAKSGHFHD 348
Query: 306 LLERRYISLANVKYLVLDEADRMLDMG--FEPQIRRIVEGSDMPSVDNRQTLMFSATFPS 363
+L + +K V+DEA + G F P + + GS + + +AT
Sbjct: 349 VLSG-LVCRGRLKRFVIDEAHCVSQWGHDFRPDYKEL--GSMRARYPSVPIIALTATATQ 405
Query: 364 EIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTL-LDLLAASNEGLT--- 419
+++ D L++ L + + + + L E K T+ LD+ +
Sbjct: 406 KVE---MDILEN---LGIRGCETFKMSFNRSNLRYEVRAKTSTVELDIASFVQTHFPDCC 459
Query: 420 -LIFVETKRAADSLTDFLIMEGFKATAI-HGDRTQGERERALSAFKTGRATILVATAVAA 477
+I+ +K+ + +++ L + TA H ++ ER + G ++VAT
Sbjct: 460 GIIYCTSKKECEMISEKL--GKYMGTAFYHAGLSKNERNSVQEKWNRGEFKVIVATIAFG 517
Query: 478 RGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNK 525
G+D +V VI++ +P ++ Y GR GR G V F+ G+K
Sbjct: 518 MGIDKKDVRFVIHYCIPKSLEGYYQETGRAGRDGLESVCVLFYTYGDK 565
>Hs4557365 [L] KOG0351 ATP-dependent DNA helicase
Length = 1417
Score = 52.8 bits (125), Expect = 2e-06
Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 1/121 (0%)
Query: 420 LIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAF-KTGRATILVATAVAAR 478
+I+ ++R D++ D L +G A A H + R+ + ++ AT
Sbjct: 892 IIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQVICATIAFGM 951
Query: 479 GLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEA 538
G+D P+V VI+ LP ++ Y GR GR G F+ + K L+ + +
Sbjct: 952 GIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLIMMEKDG 1011
Query: 539 N 539
N
Sbjct: 1012 N 1012
>Hs20555745 [A] KOG0326 ATP-dependent RNA helicase
Length = 325
Score = 52.4 bits (124), Expect = 2e-06
Identities = 32/130 (24%), Positives = 66/130 (50%), Gaps = 16/130 (12%)
Query: 181 KPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKK 240
KP+P Q+ S+PI +GRD++A A+ G+GK+ P+L +KK
Sbjct: 71 KPSPFQEESIPIALSGRDILARAKNGTGKSSAHDIPLLK---------------RLDLKK 115
Query: 241 VYPTAVILAPTRELATQIYDEAKKFT-YRSWVKPMVVYGGASIDNQIKQMRYGCNLLVAT 299
+++ PT A Q+ + + + VK ++ GG + + + ++ ++++A
Sbjct: 116 DTIQTIVIVPTGGPALQVSQICIQVSKHMGGVKVVMTTGGTNSGDDVLRLDDTVHMVIAA 175
Query: 300 PGRLTDLLER 309
PGR+ +L+++
Sbjct: 176 PGRILNLIKK 185
>At1g60930 [L] KOG0351 ATP-dependent DNA helicase
Length = 1031
Score = 52.0 bits (123), Expect = 3e-06
Identities = 29/114 (25%), Positives = 51/114 (44%)
Query: 420 LIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARG 479
+I+ ++ + +T+ L + G KA HG G+R + I+ AT G
Sbjct: 630 IIYCLSRMDCEKVTEALRVFGHKAAFYHGSMDPGKRAFVQKQWSKDEINIICATVAFGMG 689
Query: 480 LDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVS 533
++ P+V VI+ LP I+ Y GR GR G +++ + K ++S
Sbjct: 690 INKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYTDYIRVKHMIS 743
>Hs4759032 [L] KOG0352 ATP-dependent DNA helicase
Length = 410
Score = 51.6 bits (122), Expect = 4e-06
Identities = 84/387 (21%), Positives = 153/387 (38%), Gaps = 39/387 (10%)
Query: 183 TPVQKYSVPIVAAG-RDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKV 241
TP+Q+ + V G +D+ C TG+GK+ + P L + S A + +
Sbjct: 31 TPLQESATMAVVKGNKDVFVCMPTGAGKSLCYQLPALLAKGITIVVSPLIALIQDQVDHL 90
Query: 242 YPTAV-ILAPTRELATQIYDEAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATP 300
V + + +L+ Q E R + ++Y I + T
Sbjct: 91 LTLKVRVSSLNSKLSAQERKELLADLEREKPQTKILY--------ITPEMAASSSFQPT- 141
Query: 301 GRLTDLLERRYISLANVKYLVLDEADRMLDMG--FEPQIRRIVEGSDMPSVDNRQTLMFS 358
L L+ R +S YLV+DEA + G F P R+ G+ + + + +
Sbjct: 142 --LNSLVSRHLLS-----YLVVDEAHCVSQWGHDFRPDYLRL--GALRSRLGHAPCVALT 192
Query: 359 ATFPSEIQH--LASDFLKDYVFLSVGRVGSTSENITQKILYVEDFD------KNDTLLDL 410
AT ++Q A+ LK V ++ + N+ + + E K+ L L
Sbjct: 193 ATATPQVQEDVFAALHLKKPV--AIFKTPCFRANLFYDVQFKELISDPYGNLKDFCLKAL 250
Query: 411 LAASNEGLT---LIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRA 467
+++GL+ +++ T+ A + L L G A A H ER + + +
Sbjct: 251 GQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNAKAYHAGLKASERTLVQNDWMEEKV 310
Query: 468 TILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKN- 526
++VAT G+D NV V ++++ + Y GR GR G +++R +++
Sbjct: 311 PVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGRAGRDGKPSWCRLYYSRNDRDQ 370
Query: 527 ---VAKELVSLLSEANQEVPSFLTTIM 550
+ ++ V+ L E S TIM
Sbjct: 371 VSFLIRKEVAKLQEKRGNKASDKATIM 397
>Hs17436931 [A] KOG0342 ATP-dependent RNA helicase pitchoune
Length = 197
Score = 50.4 bits (119), Expect = 8e-06
Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 25/113 (22%)
Query: 301 GRLTDLLERRY-ISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSA 359
GRL D ++ N++ LV+DEADR+LD+GFE ++++I++ + +RQT++FSA
Sbjct: 32 GRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIK----LLLTHRQTMLFSA 87
Query: 360 TFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFD--KNDTLLDL 410
T +++ LA LK ++ LYV D D N+T+ DL
Sbjct: 88 TQTQKVEDLARISLK------------------KEPLYVGDDDDNANETVADL 122
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.316 0.134 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,142,959
Number of Sequences: 60738
Number of extensions: 1306663
Number of successful extensions: 4738
Number of sequences better than 1.0e-05: 251
Number of HSP's better than 0.0 without gapping: 231
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 3573
Number of HSP's gapped (non-prelim): 343
length of query: 627
length of database: 30,389,216
effective HSP length: 113
effective length of query: 514
effective length of database: 23,525,822
effective search space: 12092272508
effective search space used: 12092272508
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)