ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI0311 good J KOG2256 Translation, ribosomal structure and biogenesis Predicted protein involved in nuclear export of pre-ribosomes
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI0311 104903 102768 -712
(712 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YOR206w [J] KOG2256 Predicted protein involved in nuclear export... 879 0.0
SPAC1142.04 [J] KOG2256 Predicted protein involved in nuclear ex... 382 e-106
Hs22044319 [J] KOG2256 Predicted protein involved in nuclear exp... 293 5e-79
Hs7661606 [J] KOG2256 Predicted protein involved in nuclear expo... 293 8e-79
7298760 [J] KOG2256 Predicted protein involved in nuclear export... 245 2e-64
Hs22043608 [J] KOG2256 Predicted protein involved in nuclear exp... 236 9e-62
At2g18220 [J] KOG2256 Predicted protein involved in nuclear expo... 229 1e-59
SPAC1B3.09c [J] KOG2256 Predicted protein involved in nuclear ex... 145 2e-34
CE15606 [J] KOG2256 Predicted protein involved in nuclear export... 145 2e-34
At3g55510 [J] KOG2256 Predicted protein involved in nuclear expo... 131 3e-30
>YOR206w [J] KOG2256 Predicted protein involved in nuclear export of
pre-ribosomes
Length = 710
Score = 879 bits (2270), Expect = 0.0
Identities = 431/677 (63%), Positives = 534/677 (78%), Gaps = 7/677 (1%)
Query: 1 MGKVSKATKKFQTKHLKHTLDHRKKLKDHSKRTAGRRGNKTEEEKNAAALTKEDQKLKKS 60
MGKVSK+TKKFQ+KHLKHTLD R+K K KR GRRGNKT++EK AA T+E Q+LKKS
Sbjct: 1 MGKVSKSTKKFQSKHLKHTLDQRRKEKIQKKRIQGRRGNKTDQEKADAAGTREQQQLKKS 60
Query: 61 AKEEVFNDMKVEEFFDNGFDIPKMSKKMAKETEKASKVKXXXXXXXXXXXXXXXXXXXXL 120
AKEEVF DM VE FF+ G +IPK +KK+ K+T +K + L
Sbjct: 61 AKEEVFKDMSVETFFEKGIEIPKENKKLKKKT---TKEQSDEDSSSSEEEEDMGQSMAKL 117
Query: 121 AKKDPDFYKYLAENEPDLLSFKSTNPLDEISDDXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
A+KDP+FYKYL EN+ DLL F TNPLD I D
Sbjct: 118 AEKDPEFYKYLEENDKDLLDFAGTNPLDGI--DSQDEGEDAERNSNIEEKSEQMELEKEK 175
Query: 181 IAVDIKLVNKWKKDLKNSPSFKTIRSVVSAFKAAVNMNNEENVDDYKFTVLDEKAFHELM 240
I + +KLV KWKK L +SPS K +R+++SAFK AVN+N EEN++DYK+ + DEKAFHELM
Sbjct: 176 IELSLKLVRKWKKQLHDSPSLKLLRNIISAFKVAVNLNKEENIEDYKYAITDEKAFHELM 235
Query: 241 FVALVDMPKAVQKLTPYRVSKNETRTLPSNKNVTKLSSVLKSHVPSLIVLLSDITNTDVA 300
F+ L D+P+A+QK+ PY++ K RTLP+ NV+++SS++KSH SL++LL+DITNT+ A
Sbjct: 236 FMVLKDVPQAIQKMAPYKIVKG-ARTLPNGGNVSRVSSIVKSHAGSLLILLNDITNTETA 294
Query: 301 SMILHSTYELLPYFISFRRLLKELISQVVEVWSTTGDVETQIATFAFLNNASREYKKALL 360
+++LHS EL+PY +S+RR+LKELI +V VWSTT ++ETQIA+FAFL N ++E+KK++L
Sbjct: 295 ALVLHSVNELMPYLLSYRRILKELIKSIVGVWSTTRELETQIASFAFLINTTKEFKKSML 354
Query: 361 EVVLKSTYSTFIKSCRKTNIRNMPLINFQKNSAAELFGIDDVISYQSGFEYIRQLAIHLR 420
E LK+TYSTFIKSCRKTN+R+MPLINFQKNSAAELFGID+V+ YQ GFEYIRQLAIHLR
Sbjct: 355 ETTLKTTYSTFIKSCRKTNMRSMPLINFQKNSAAELFGIDEVLGYQVGFEYIRQLAIHLR 414
Query: 421 NSINATTKRSSKVDPSSAYKIVYNWQFCHSLDFWSRVISIQCNPEKENGHESPLRQLIYP 480
N++NATTK+SSK++ + AYKIVYNWQFCHSLDFWSRV+S C PEKENG ESPLRQLIYP
Sbjct: 415 NTMNATTKKSSKINSAEAYKIVYNWQFCHSLDFWSRVLSFACQPEKENGSESPLRQLIYP 474
Query: 481 LVQVTIGVIRLIPTAQFFPLRFYLIRSLIRLSQNTGIFIPVYPLLSEILSSTAFTKKPRK 540
LVQVT+GVIRLIPT QFFPLRFYLI+SLIRLSQN+G+FIP+YPLLSEIL+STAFTK P+K
Sbjct: 475 LVQVTLGVIRLIPTPQFFPLRFYLIKSLIRLSQNSGVFIPIYPLLSEILTSTAFTKAPKK 534
Query: 541 S-TLPAFDFDHNIKCTQAYLGTKIYQDGLAEQFVDLLGEYFVLYSRSVSFPELTTLAVIS 599
S L AFDF+HNIKCTQAYL TKIYQ+GL+EQFVDLLG+YF LY ++++FPEL T +IS
Sbjct: 535 SPNLAAFDFEHNIKCTQAYLNTKIYQEGLSEQFVDLLGDYFALYCKNIAFPELVTPVIIS 594
Query: 600 LRRYIKNSENVKFNKMLQNVVDKINQNAQFITKKRSDVDFGPNNRTEVEKFLNEISWKDT 659
LRRYIK S NVK NK L VV+K+NQN+ FI +KRSDV+FGP N++EV +FLN+++W T
Sbjct: 595 LRRYIKTSTNVKLNKRLSTVVEKLNQNSTFIQEKRSDVEFGPTNKSEVSRFLNDVAWNKT 654
Query: 660 PLGSWVAIQNEVKEEKA 676
PLGS+VA+Q EVKEEKA
Sbjct: 655 PLGSYVAVQREVKEEKA 671
>SPAC1142.04 [J] KOG2256 Predicted protein involved in nuclear export of
pre-ribosomes
Length = 707
Score = 382 bits (982), Expect = e-106
Identities = 233/691 (33%), Positives = 361/691 (51%), Gaps = 46/691 (6%)
Query: 1 MGKVSKATKKFQTKHLKHTLDHRKKLKDHSKRTAGRRGNKTEEEKNAAALTKEDQKLKKS 60
M K+S K + L D KK KD K G R +++E L ++ +K ++
Sbjct: 1 MVKLSSIIKARKANALAKKNDKIKK-KDTDK---GIRQKHSKKEGKDETLKRDVEKFIQN 56
Query: 61 AKEEVF----NDMKVEEFFDNGF---------DIPKMSKKMAKETEKASKVKXXXXXXXX 107
E + M ++ F + GF D K+ E
Sbjct: 57 VNSEDTPSEDDSMSMDAFLEGGFEELDSANSNDAGSSRKRKNLPNENTQDSTSESSEEEE 116
Query: 108 XXXXXXXXXXXXLAKKDPDFYKYLAENEPDLLSFKS--TNPLDEISDDXXXXXXXXXXXX 165
L +KDP+FYK+L +N+ DLL F + T+ + + D+
Sbjct: 117 DGLESYQKQLEGLKEKDPEFYKFLEQNDQDLLEFNAAETDAMAKEIDENERLKSSSGK-- 174
Query: 166 XXXXXXXXXXXXXXXIAVDIKLVNKWKKDLKNSPSFKTIRSVVSAFKAAVNMNNEENVDD 225
I + + +W+K L+ + S T++ VV AFKAA +N EE +D
Sbjct: 175 ---------------IVLTSDTIQQWQKLLETNHSLTTLQKVVQAFKAAAFLNEEE-AED 218
Query: 226 YKFTVLDEKAFHELMFVALVDMPKAVQKLTPYRVSKNETRTLPSNKNVT-KLSSVLKSHV 284
K+T+ D K F++L+ +A+ +PK + P + + + ++ V KL VLKS+
Sbjct: 219 LKYTISDSKVFNDLLLLAIQYVPKVLNYHVPIQEDAKGKKFINTDSKVLPKLRPVLKSYG 278
Query: 285 PSLIVLLSDITNTDVASMILHSTYELLPYFISFRRLLKELISQVVEVWSTTGDVETQIAT 344
S++ LL +T+ S++L +LPY I++R+ LK+ VEVWS+T D + +
Sbjct: 279 FSILRLLEGMTDAKNISLLLREAQNVLPYMITYRKFLKQFTQATVEVWSSTRDDSVRFSA 338
Query: 345 FAFLNNASREYKKALLEVVLKSTYSTFIKSCRKTNIRNMPLINFQKNSAAELFGIDDVIS 404
L LLE VLK Y + T + + INF KNSA LF +D
Sbjct: 339 VVLLRTLCLTADITLLEFVLKEVYLGMARQSAYTTVHTLDKINFLKNSAVNLFLLDAESC 398
Query: 405 YQSGFEYIRQLAIHLRNSINATTKRSSKVDPSSAYKIVYNWQFCHSLDFWSRVISIQCNP 464
Y GF YIRQLAI LRN+I+ +K S K V +W + HSLDFW+R++S
Sbjct: 399 YLIGFRYIRQLAITLRNTIHQPSKDSRKP--------VQSWSYVHSLDFWARLLSQAAWL 450
Query: 465 EKENGHESPLRQLIYPLVQVTIGVIRLIPTAQFFPLRFYLIRSLIRLSQNTGIFIPVYPL 524
+E G S L+ L+YPLVQ+ +GVI P++Q FP+RF++IRSLI LS++TG+FIP+ P
Sbjct: 451 SREKGVASELQSLVYPLVQIALGVIMSSPSSQLFPMRFHIIRSLIYLSRHTGVFIPLAPS 510
Query: 525 LSEILSSTAFTKKPRKSTLPAFDFDHNIKCTQAYLGTKIYQDGLAEQFVDLLGEYFVLYS 584
L E+L S+ ++K + STL DFD ++ + +YL TK+YQDGL +Q ++LL EY+VLY+
Sbjct: 511 LFEVLDSSYVSRKAKASTLKPLDFDVELRASSSYLRTKVYQDGLIDQLLELLSEYYVLYA 570
Query: 585 RSVSFPELTTLAVISLRRYIKNSENVKFNKMLQNVVDKINQNAQFITKKRSDVDFGPNNR 644
+SFPEL A++ +R+ K S+N K N+ L +V+++ Q ++F+T+KR+ F P +
Sbjct: 571 TDISFPELVIPAIVRSKRFAKRSKNAKLNRGLLTLVNRLEQQSKFMTEKRNQQKFAPIDS 630
Query: 645 TEVEKFLNEISWKDTPLGSWVAIQNEVKEEK 675
VE+F I W+ TPLG +V Q + +EE+
Sbjct: 631 DSVEQFAQTIDWQQTPLGIYVVTQRQTREEQ 661
>Hs22044319 [J] KOG2256 Predicted protein involved in nuclear export of
pre-ribosomes
Length = 749
Score = 293 bits (751), Expect = 5e-79
Identities = 186/619 (30%), Positives = 309/619 (49%), Gaps = 41/619 (6%)
Query: 68 DMKVEEFFDNGFDI---------PKMSKKMAKETEKASKVKXXXXXXXXXXXXXXXXXX- 117
++ V+EF +GFD P+ + A+E ++
Sbjct: 13 ELTVDEFLASGFDSESESESENSPQAETREAREAARSPDKPGGSPSASRRKGRASEHKDQ 72
Query: 118 -XXLAKKDPDFYKYLAENEPDLLSFKSTNPLDE----------ISDDXXXXXXXXXXXXX 166
L +DP+FYK+L EN+ LL+F ++ +E + ++
Sbjct: 73 LSRLKDRDPEFYKFLQENDQSLLNFSDSDSSEEEEGPFHSLPDVLEEASEEEDGAEEGED 132
Query: 167 XXXXXXXXXXXXXXIAVDIKLVNKWKKDLKNSPSFKTIRSVVSAFKAAV--NMNNEENVD 224
+ V + +V +WK+ K + K VV AF+AAV ++E+ +
Sbjct: 133 GDRVPRGLKGKKNSVPVTVAMVERWKQAAKQRLTPKLFHEVVQAFRAAVATTRGDQESAE 192
Query: 225 DYKFTVLDEKAFHELMFVALVDMPKAVQKLTPYRVSKNETRTL-PSNKNVT-KLSSVLKS 282
KF V D AF+ L+ + D+ +QKL +V+K+ +R L PS+ + KL +K+
Sbjct: 193 ANKFQVTDSAAFNALVTFCIRDLIGCLQKLLFGKVAKDSSRMLQPSSSPLWGKLRVDIKA 252
Query: 283 HVPSLIVLLSDITNTDVASMILHSTYELLPYFISFRRLLKELISQVVEVWSTTGDVETQI 342
++ S I L+S ++ T V + +L L+P F++F + + L+ ++V VWST G+ ++
Sbjct: 253 YLGSAIQLVSCLSETTVLAAVLRHISVLVPCFLTFPKQCRMLLKRMVIVWST-GEESLRV 311
Query: 343 ATFAFLNNASREYKKALLEVVLKSTYSTFIKSCRKTNIRNMPLINFQKNSAAELFGIDDV 402
F L+ R K L VLK Y T++++C+ T+ +P I+F + + EL ++
Sbjct: 312 LAFLVLSRVCRHKKDTFLGPVLKQMYITYVRNCKFTSPGALPFISFMQWTLTELLALEPG 371
Query: 403 ISYQSGFEYIRQLAIHLRNSINATTKRSSKVDPSSAYKIVYNWQFCHSLDFWSRVISIQC 462
++YQ F YIRQLAIHLRN++ K + Y+ VYNWQ+ H L W RV+S
Sbjct: 372 VAYQHAFLYIRQLAIHLRNAMTTRKKET--------YQSVYNWQYVHCLFLWCRVLSTA- 422
Query: 463 NPEKENGHESPLRQLIYPLVQVTIGVIRLIPTAQFFPLRFYLIRSLIRLSQNTGIFIPVY 522
G L+ L+YPL QV IG I+LIPTA+F+PLR + IR+L LS ++G FIPV
Sbjct: 423 ------GPSEALQPLVYPLAQVIIGCIKLIPTARFYPLRMHCIRALTLLSGSSGAFIPVL 476
Query: 523 PLLSEILSSTAFTKKPRKSTLPAFDFDHNIKCTQAYLGTKIYQDGLAEQFVDLLGEYFVL 582
P + E+ F +KP + + +F +K + L K Y+DGL EQ DL EY
Sbjct: 477 PFILEMFQQVDFNRKPGRMSSKPINFSVILKLSNVNLQEKAYRDGLVEQLYDLTLEYLHS 536
Query: 583 YSRSVSFPELTTLAVISLRRYIKNSENVKFNKMLQNVVDKINQNAQFITKKRSDVDFGPN 642
+ + FPEL V+ L+ +++ + + + +Q ++ K+ +N+ +I +R V FG +
Sbjct: 537 QAHCIGFPELVLPVVLQLKSFLRECKVANYCRQVQQLLGKVQENSAYICSRRQRVSFGVS 596
Query: 643 NRTEVEKFLNEISWKDTPL 661
+ VE + + TPL
Sbjct: 597 EQQAVEAWEKLTREEGTPL 615
>Hs7661606 [J] KOG2256 Predicted protein involved in nuclear export of
pre-ribosomes
Length = 749
Score = 293 bits (749), Expect = 8e-79
Identities = 186/619 (30%), Positives = 308/619 (49%), Gaps = 41/619 (6%)
Query: 68 DMKVEEFFDNGFDI---------PKMSKKMAKETEKASKVKXXXXXXXXXXXXXXXXXX- 117
++ V+EF +GFD P+ + A+E ++
Sbjct: 13 ELTVDEFLASGFDSESESESENSPQAETREAREAARSPDKPGGSPSASRRKGRASEHKDQ 72
Query: 118 -XXLAKKDPDFYKYLAENEPDLLSFKSTNPLDE----------ISDDXXXXXXXXXXXXX 166
L +DP+FYK+L EN+ LL+F ++ +E + ++
Sbjct: 73 LSRLKDRDPEFYKFLQENDQSLLNFSDSDSSEEEEGPFHSLPDVLEEASEEEDGAEEGED 132
Query: 167 XXXXXXXXXXXXXXIAVDIKLVNKWKKDLKNSPSFKTIRSVVSAFKAAV--NMNNEENVD 224
+ V + +V +WK+ K + K VV AF+AAV ++E+ +
Sbjct: 133 GDRVPRGLKGKKNSVPVTVAMVERWKQAAKQRLTPKLFHEVVQAFQAAVATTRGDQESAE 192
Query: 225 DYKFTVLDEKAFHELMFVALVDMPKAVQKLTPYRVSKNETRTL-PSNKNVT-KLSSVLKS 282
KF V D AF+ L+ + D+ +QKL +V+K+ +R L PS+ + KL +K+
Sbjct: 193 ANKFQVTDSAAFNALVTFCIRDLIGCLQKLLFGKVAKDSSRMLQPSSSPLWGKLRVDIKA 252
Query: 283 HVPSLIVLLSDITNTDVASMILHSTYELLPYFISFRRLLKELISQVVEVWSTTGDVETQI 342
++ S I L+S ++ T V + +L L+P F++F + + L+ ++V VWST G+ ++
Sbjct: 253 YLGSAIQLVSCLSETTVLAAVLRHISVLVPCFLTFPKQCRMLLKRMVVVWST-GEESLRV 311
Query: 343 ATFAFLNNASREYKKALLEVVLKSTYSTFIKSCRKTNIRNMPLINFQKNSAAELFGIDDV 402
F L+ R K L VLK Y T++++C T+ +P I+F + + EL ++
Sbjct: 312 LAFLVLSRVCRHKKDTFLGPVLKQMYITYVRNCEFTSPGALPFISFMQWTLTELLALEPG 371
Query: 403 ISYQSGFEYIRQLAIHLRNSINATTKRSSKVDPSSAYKIVYNWQFCHSLDFWSRVISIQC 462
++YQ F YIRQLAIHLRN++ K + Y+ VYNWQ+ H L W RV+S
Sbjct: 372 VAYQHAFLYIRQLAIHLRNAMTTRKKET--------YQSVYNWQYVHCLFLWCRVLSTA- 422
Query: 463 NPEKENGHESPLRQLIYPLVQVTIGVIRLIPTAQFFPLRFYLIRSLIRLSQNTGIFIPVY 522
G L+ L+YPL QV IG I+LIPTA+F+PLR + IR+L LS ++G FIPV
Sbjct: 423 ------GPSEALQPLVYPLAQVIIGCIKLIPTARFYPLRMHCIRALTLLSGSSGAFIPVL 476
Query: 523 PLLSEILSSTAFTKKPRKSTLPAFDFDHNIKCTQAYLGTKIYQDGLAEQFVDLLGEYFVL 582
P + E+ F +KP + + +F +K + L K Y+DGL EQ DL EY
Sbjct: 477 PFILEMFQQVDFNRKPGRMSSKPINFSVILKLSNVNLQEKAYRDGLVEQLYDLTLEYLHS 536
Query: 583 YSRSVSFPELTTLAVISLRRYIKNSENVKFNKMLQNVVDKINQNAQFITKKRSDVDFGPN 642
+ + FPEL V+ L+ +++ + + + +Q ++ K+ +N+ +I +R V FG +
Sbjct: 537 QAHCIGFPELVLPVVLQLKSFLRECKVANYCRQVQQLLGKVQENSAYICSRRQRVSFGVS 596
Query: 643 NRTEVEKFLNEISWKDTPL 661
+ VE + + TPL
Sbjct: 597 EQQAVEAWEKLTREEGTPL 615
>7298760 [J] KOG2256 Predicted protein involved in nuclear export of
pre-ribosomes
Length = 766
Score = 245 bits (625), Expect = 2e-64
Identities = 148/508 (29%), Positives = 271/508 (53%), Gaps = 32/508 (6%)
Query: 183 VDIKLVNKWKKDLKNSP-SFKTIRSVVSAFKAAVNMNNEENVDDYK-------FTVLDEK 234
+ + L+++W++ L + S +R V+ AF +A+ + + D + F V+
Sbjct: 164 ITLNLLHQWEQQLGQANISIDIVRKVIQAFNSALASISADGADGGENKHNAAAFKVVGAA 223
Query: 235 AFHELMFVALVDMPKAVQKLTPYRVSKNETRTLPSNKNVTKLSSVLKSHVPSLIVLLSDI 294
AF+ ++ + ++ + A+ +L R N + L +K K+ L+ ++ LI L+ +
Sbjct: 224 AFNGVIQLCVIHLQPAIIRLLGVR--PNSSLPLHKHKKWVKVRGCLRYYLTDLIRLVEQV 281
Query: 295 TNTDVASMILHSTYELLPYFISFRRLLKELISQVVEVWSTTGDVETQIATFAFLNNASRE 354
++ ++ ++L +++ + F L K ++ ++V +WST GD ++ F + +R+
Sbjct: 282 SSPNILGVLLKHLHQMAGMVVPFSALGKTILKRLVVLWST-GDETVRVLAFLCILKITRK 340
Query: 355 YKKALLEVVLKSTYSTFIKSCRKTNIRNMPLINFQKNSAAELFGIDDVISYQSGFEYIRQ 414
+ +L VLK+ Y ++++ + + +P INF + S E+F +D +SYQ F YIRQ
Sbjct: 341 QQATMLNHVLKAMYLAYVRNSKFVSPNTLPGINFMRRSLVEMFALDLNVSYQHVFLYIRQ 400
Query: 415 LAIHLRNSINATTKRSSKVDPSSAYKIVYNWQFCHSLDFWSRVISIQCNPEKENGHESPL 474
LAIHLRN++ K S ++ VYNWQF +SL W+ ++ N + L
Sbjct: 401 LAIHLRNAVILKKKDS--------FQAVYNWQFINSLRLWADLLGASANKPQ-------L 445
Query: 475 RQLIYPLVQVTIGVIRLIPTAQFFPLRFYLIRSLIRLSQNTGIFIPVYPLLSEILSSTAF 534
+ LIYPLV + GVIRLIPTAQ+FPLRF+ +++LI L++ T ++PV PL+ E+L S F
Sbjct: 446 QPLIYPLVTIATGVIRLIPTAQYFPLRFHCLQTLISLAKETNTYVPVLPLIVEVLKSNTF 505
Query: 535 TKKPRKSTLPAFDFDHNIKCTQAYLGTKIYQDGLAEQFVDLLGEYFVLYSRSVSFPELTT 594
+K ++ F ++ + L ++D + EQ LL EY S S++F +L
Sbjct: 506 NRKHSAVSMKPVQFTCVLRLNKGQLAENGFRDEVIEQVCGLLLEYLAHESTSLAFSDLVV 565
Query: 595 LAVISLRRYIKNSENVKFNKMLQNVVDKINQNAQFITKKR--SDVDFGPNNRTEVEKFLN 652
V++++ Y+K N + + L+ +++KI ++A+FI ++R S V F + V +
Sbjct: 566 PTVMAIKTYLKECRNANYARKLKQLLEKIQESARFIEQQRGKSSVTFDIKDAQAVAAWEQ 625
Query: 653 EISWKDTPL----GSWVAIQNEVKEEKA 676
++ K TPL SW+ K +A
Sbjct: 626 QLRLKRTPLDVYYASWLKTHETKKRRQA 653
>Hs22043608 [J] KOG2256 Predicted protein involved in nuclear export of
pre-ribosomes
Length = 717
Score = 236 bits (602), Expect = 9e-62
Identities = 165/594 (27%), Positives = 278/594 (46%), Gaps = 68/594 (11%)
Query: 68 DMKVEEFFDNGFDI-----PKMSKKMAKETEKASKVKXXXXXXXXXXXXXXXXXX--XXL 120
++ V+EF +GFD P+ + A+E ++ L
Sbjct: 13 ELTVDEFLASGFDSKSEYSPEAETREAREAARSPDEPGGSPSASRRKGRASEHKDQLSRL 72
Query: 121 AKKDPDFYKYLAENEPDLLSFKSTNPLDE----------ISDDXXXXXXXXXXXXXXXXX 170
+D +FYK+L EN+ L+F ++ +E + ++
Sbjct: 73 KDRDAEFYKFLQENDQSQLNFSDSDSSEEEEEPFHSLPYVLEEASEDEDGAEEGEDGDRV 132
Query: 171 XXXXXXXXXXIAVDIKLVNKWKKDLKNSPSFKTIRSVVSAFKAAV--NMNNEENVDDYKF 228
+ V + +V +WK+ K + K VV AF+AAV ++E+ + KF
Sbjct: 133 PRGLKGKKNCVPVTLAMVERWKQAAKQRLTPKLFHEVVQAFRAAVATTQGDQESAEANKF 192
Query: 229 TVLDEKAFHELM-FVALV-----DMPKAVQKLTPYRVSKNETRTLPSNKNVT--KLSSVL 280
V D F+ L+ F ALV D+ +QKL +V+K+ +R L + ++ KL +
Sbjct: 193 QVTDSAVFNALVVFNALVTFCIRDLTGCLQKLLIGKVAKDSSRMLQPSSSLLWGKLRVDI 252
Query: 281 KSHVPSLIVLLSDITNTDVASMILHSTYELLPYFISFRRLLKELISQVVEVWSTTGDVET 340
K+++ S+I L+S + T V + +L L+P F++F + E
Sbjct: 253 KAYLGSVIQLVSCVAETVVLAAVLWHISVLVPCFLTFPKQCSR---------------EC 297
Query: 341 QIATFAFLNNASREYKKALLEVVLKSTYSTFIKSCRKTNIRNMPLINFQKNSAAELFGID 400
++ R K L +LK Y ++++C+ T+ +P I+ + + EL ++
Sbjct: 298 RVC---------RHKKDTFLGPILKQMYIMYVRNCKFTSPGALPFISSMQRTLTELLALE 348
Query: 401 DVISYQSGFEYIRQLAIHLRNSINATTKRSSKVDPSSAYKIVYNWQFCHSLDFWSRVISI 460
++YQ F YIRQLAIHL N++ K +S VYNWQ+ H L W RV+S
Sbjct: 349 PGVAYQHAFLYIRQLAIHLHNAMTTRKKETS----------VYNWQYMHCLFLWCRVLST 398
Query: 461 QCNPEKENGHESPLRQLIYPLVQVTIGVIRLIPTAQFFPLRFYLIRSLIRLSQNTGIFIP 520
G L+ L+Y L QV IG I+LIPTA+F+PLR + IR+L LS ++G FIP
Sbjct: 399 V-------GPSEALQPLVYSLAQVIIGCIKLIPTARFYPLRMHCIRALTLLSGSSGAFIP 451
Query: 521 VYPLLSEILSSTAFTKKPRKSTLPAFDFDHNIKCTQAYLGTKIYQDGLAEQFVDLLGEYF 580
V P + E+ F++KP + + +F +K + L K YQDGL EQ DL EY
Sbjct: 452 VLPFILEMFQQVDFSRKPGRMSSKPINFSVILKLSNVNLQEKAYQDGLVEQLYDLTLEYL 511
Query: 581 VLYSRSVSFPELTTLAVISLRRYIKNSENVKFNKMLQNVVDKINQNAQFITKKR 634
+ + FPEL V+ L+ +++ + + + +Q ++ K+ +N++ I +R
Sbjct: 512 HSQAHCIGFPELALPVVLQLKLFLRERKVANYCRQVQQLLGKVQENSEHICSRR 565
>At2g18220 [J] KOG2256 Predicted protein involved in nuclear export of
pre-ribosomes
Length = 779
Score = 229 bits (583), Expect = 1e-59
Identities = 169/683 (24%), Positives = 307/683 (44%), Gaps = 71/683 (10%)
Query: 5 SKATKKFQT-KHLKHTLDHRKKLKD-HSKRTAGRRGNKTEEEKNAAALTKEDQKLKKSAK 62
+K K F+ KH K +D +K++K SK+ +E +A + E + KK K
Sbjct: 3 AKELKGFEIDKHFKSNVDDKKRVKKLKSKKLEAEEELNNVQEIDAHDIVMEQKSDKKRGK 62
Query: 63 EEVFNDMKVEEFFDNGFDIPKMSKKMAKETEKASKVKXXXXXXXXXXXXXXXXXXXXLAK 122
K+ K A+ E ++K L +
Sbjct: 63 --------------------KVKSKKAEAEEHEEELKR-------------------LQE 83
Query: 123 KDPDFYKYLAENEPDLLSFKSTNPLDEISDDX-----XXXXXXXXXXXXXXXXXXXXXXX 177
KDPDF++Y+ E++ +LL F +T EI DD
Sbjct: 84 KDPDFFQYMKEHDAELLKFDAT----EIEDDADVEPDTDLEDTEKEGDDEATKMEIAKKV 139
Query: 178 XXXIAVDIKLVNKWKKDLKNSPSFKTIRSVVSAFKAAVNMNNEENVDDY-KFTVLDEKAF 236
+ +V+ W K +++ +RS++ A++ A + ++ D KF+V+ + F
Sbjct: 140 HVQKTITASMVDAWSKSIEDEAKLGGVRSILRAYRTACHYGDDTGDDQSTKFSVMSSEVF 199
Query: 237 HELMFVALVDMPKAVQKLTPY----RVSKNETRTLPSNKNVTKLSSVLKSHVPSLIVLLS 292
+++M L +M ++KL + R +K L + + + ++KS++ + + +L+
Sbjct: 200 NKIMIYVLSEMDGILRKLLRFPEDTRGTKETILELTNTRPWKNYNHLVKSYLGNSLHVLN 259
Query: 293 DITNTDVASMILHSTYELLPYFISFRRLLKELISQVVEVWSTTGDVETQIATFAFLNNAS 352
+T+T++ + L + +F LL++ I + W T G + + FL +
Sbjct: 260 QMTDTEMITFTLRRLKHSSVFLAAFPSLLRKYIKVALHFWGT-GSGALPVVSLLFLRDLC 318
Query: 353 REYKKALLEVVLKSTYSTFIKSCRKTNIRNMPLINFQKNSAAELFGIDDVISYQSGFEYI 412
++ K Y ++ +C+ N + I+F N EL G D +YQ F +I
Sbjct: 319 IRLGSDCVDDCFKGMYKAYVLNCQFVNADKLKHISFLGNCFIELLGTDISAAYQHAFVFI 378
Query: 413 RQLAIHLRNSINATTKRSSKVDPSSAYKIVYNWQFCHSLDFWSRVISIQCNPEKENGHES 472
RQLA+ LR ++N TK A++ VY W+F H L+ W+ + + +S
Sbjct: 379 RQLAMILREALNTKTKE--------AFRKVYQWKFIHCLELWTGAVCAYSS-------QS 423
Query: 473 PLRQLIYPLVQVTIGVIRLIPTAQFFPLRFYLIRSLIRLSQNTGIFIPVYPLLSEILSST 532
LR + YPL Q+ GV RL+PTA++ PLR +R L RL+ TG FIPV LL ++L
Sbjct: 424 ELRPVAYPLAQIITGVARLVPTARYTPLRLRCVRMLNRLAAATGTFIPVSMLLVDMLEMK 483
Query: 533 AFTKKPRKSTLPAFDFDHNIKCTQAYLGTKIYQDGLAEQFVDLLGEYFVLYSRSVSFPEL 592
+ P D +K ++ + T+ +Q+ V+ L E+ +S SV+F EL
Sbjct: 484 ELNRPPTGGVGKGVDLRTLLKVSKPAVKTRAFQEACVYTVVEELVEHLSQWSCSVAFFEL 543
Query: 593 TTLAVISLRRYIKNSENVKFNKMLQNVVDKINQNAQFITKKRSDVDFGPNNRTEVEKFLN 652
+ + I LR + K+++ +F K ++ ++ +I N++F+ KKR+ + F PN+ +
Sbjct: 544 SFIPTIRLRSFCKSTKAERFRKEMKQLISQIEANSEFVNKKRALIKFLPNDLAAESFLED 603
Query: 653 EISWKDTPLGSWVAIQNEVKEEK 675
E TPL + I + +++
Sbjct: 604 EKKAGKTPLLQYAEIIRQRAQQR 626
>SPAC1B3.09c [J] KOG2256 Predicted protein involved in nuclear export of
pre-ribosomes
Length = 528
Score = 145 bits (366), Expect = 2e-34
Identities = 88/302 (29%), Positives = 157/302 (51%), Gaps = 34/302 (11%)
Query: 384 PLINFQKNSAAELFGID----------DVISYQS------GFEYIRQLAIHLRNSINATT 427
PL++F K+S +E+ D +++S S F Y+ QL HL+ + +
Sbjct: 239 PLLDFFKSSPSEVNDFDTLEELQLFLIELLSLNSRFYQKIAFAYLSQLDAHLKRCLKES- 297
Query: 428 KRSSKVDPSSAYKIVYNWQFCHSLDFWSRVISIQCNPEKENGHESPLRQLIYPLVQVTIG 487
+ S AYK++YNWQF SL FW VIS N +ES +++ + +T+
Sbjct: 298 ------ESSDAYKLIYNWQFTLSLRFWLHVISFLWND-----YESISKEISPIAINLTLD 346
Query: 488 VIRLIPTAQFFPLRFYLIRSLIRLSQNTGIFIPVYPLLSEILSSTAFTKKP---RKSTLP 544
IRLIPT Q++PLR +L++SL+ + ++T ++IP+ E++ P K +
Sbjct: 347 CIRLIPTEQYYPLRLHLLKSLVNICRSTRLYIPLSSQFLEMIPFVLRRSSPLSDDKEVMY 406
Query: 545 AFDFDHNIKCTQAYLGTKIYQDGLAEQFVDLLGEYFVLYSRSVSFPELTTLAVISLRRYI 604
FD + + L +K Y++ + ++ + L+ EYF ++S S++FPEL+ + LR +
Sbjct: 407 NFDMYSTLHVPKECLLSKSYRNNVRKEVILLMTEYFAIFSNSIAFPELSAPIIAQLRGLV 466
Query: 605 KNSENVKFNKMLQNVVDKINQNAQFITKKRSDVDFGPNNRTEVEKFLNEISWKDTPLGSW 664
S K + ++K+ F+ +R +VDF N+ ++VE F ++ W+ TP+G
Sbjct: 467 NESAP---GKHVLTFLNKLESTFSFVESRRMNVDFTLNDTSQVEAFEKDLDWRSTPMGKL 523
Query: 665 VA 666
V+
Sbjct: 524 VS 525
>CE15606 [J] KOG2256 Predicted protein involved in nuclear export of
pre-ribosomes
Length = 715
Score = 145 bits (366), Expect = 2e-34
Identities = 120/592 (20%), Positives = 251/592 (42%), Gaps = 52/592 (8%)
Query: 120 LAKKDPDFYKYLAENEPDLLSFKSTNPLDE-------------ISDDXXXXXXXXXXXXX 166
L + DP+F+K+L + + DLL+ + DE DD
Sbjct: 75 LKQSDPEFFKFLQQEDADLLNMEDDGDDDEDDDEDDEDEEEEESDDDEDDEEDDDKTKIK 134
Query: 167 XXXXXXXXXXXXXXIAVDIKLVNKWKKDLKNSPSFKT------IRSVVSAFKAAVNMNNE 220
+ VD + + ++ L T +R V F A V
Sbjct: 135 KIRKPKIKSDNSGRLIVDSNVYSYLQQVLVLDDETSTPTNPSDVRMAVDVFVACVARVGA 194
Query: 221 ENVDDYKFTVLDEKAFHELMFVALVDMPKAVQKLTPYRVSKNETRTLPSNKNVTKLSSVL 280
+ ++ K+ + ++ F ++ + MP +++L + + L S + K + +
Sbjct: 195 D-IEAPKYVINEQSIFEAVVRMCFQAMPDILKRLL--KAKPEGDKVLFSKTAIKKYQTYV 251
Query: 281 KSHVPSLIVLLSDITNTDVASMILHSTYELLPYFISFRRLLKELISQVVEVWSTTGDVET 340
++++ ++IV L+++ T+V + + L+ + F R+ K LI VV +WS +E
Sbjct: 252 RTYLHAMIVFLNEVQTTEVLIATIKAMTRLVDLYAHFSRMSKLLIKAVVRIWSRK-TLEC 310
Query: 341 QIATFAFLNNASREYKKALLEVVLKSTYSTFIKSCRKTNIRNMPLINFQKNSAAELFGID 400
++ F +N + Y + + + K+ Y F+ + + PL+ F + AEL ++
Sbjct: 311 RLPAFVCMNLLVKNYPQHFVPLY-KTAYVAFVANSKIVTNETWPLLQFMHRTFAELTILN 369
Query: 401 DVISYQSGFEYIRQLAIHLRNSINATTKRSSKVDPSSAYKIVYNWQFCHSLDFWSRVISI 460
+Y+ F YIRQ A+HLRN++ + ++ +YNWQ + W RVI+
Sbjct: 370 PEQAYKYAFVYIRQTAVHLRNAMISKGRKDLIFS-------IYNWQMMQCMYMWVRVIA- 421
Query: 461 QCNPEKENGHESPLRQLIYPLVQVTIGVIRLIPTAQFFPLRFYLIRSLIRLSQNTGIFIP 520
NG E + +L+YPL+QV +G+ +L F PLR + + LI+L + +IP
Sbjct: 422 --KAHSVNGAEQ-IGELVYPLIQVIVGIFKLCNAPTFLPLRLHCCQLLIQLQASCTNYIP 478
Query: 521 VYPL----LSEILSSTAFTKKPRKSTLPAFDFDHNIKCTQAYLGTKIYQDGLAEQFVDLL 576
+ + L E+ KP K + D + +KC+ + ++ ++E +
Sbjct: 479 ILQVSCDCLEELARELKSKPKPVKGAVKLPDIECTLKCSSQFSDLPQWRKVISEHVFRTM 538
Query: 577 GEYFVLYSRSVSFPELTTLAVISLRRYIKNSENVKFNKMLQNVVDKINQNAQFITKKRSD 636
+ L + +FP++ + ++ +N + + K+ ++++F+ +
Sbjct: 539 MQSAHLLASQAAFPDVVLPINHRISAILETMKNGDHAHLFRGFQTKLKEHSRFVLDVLAR 598
Query: 637 VDFGPNNRTEVEKFLNEISWKDTPLGSWV-------------AIQNEVKEEK 675
N+ +V +++ D+P+ ++ A++N K++K
Sbjct: 599 KSVDINDEMQVRAVRFDLNNHDSPIKTFYRQWEKVWKMKERSAVENSKKDDK 650
>At3g55510 [J] KOG2256 Predicted protein involved in nuclear export of
pre-ribosomes
Length = 606
Score = 131 bits (330), Expect = 3e-30
Identities = 101/395 (25%), Positives = 186/395 (46%), Gaps = 25/395 (6%)
Query: 260 SKNETRTLPSNKNVTKLSSVLKSHVPSLIVLLSDITNTDVASMILHSTYELLPYFISFRR 319
+K + L +N L ++KS S + L+ + ++ S L + + +F
Sbjct: 203 TKEKILKLKNNPKWDSLKPLVKSFFRSTLHLVKQAGDLEIISFTLTQLRVSIVFLAAFPD 262
Query: 320 LLKELISQVVEVWSTTGDVETQIATFAFLNNASREYKKALLEVVLKSTYSTFIKSCR--K 377
LLK+LI V +W T + +Q A F L + S + + L + Y F+ C K
Sbjct: 263 LLKKLIKISVHLWVTGEETISQQA-FLILKDISMVFNSECFDSCLINMYKAFLHDCDIPK 321
Query: 378 TNIRNMPLINFQKNSAAELFGIDDVISYQSGFEYIRQLAIHLRNSINATTKRSSKVDPSS 437
N P F ++S EL D SY I QLA L+ ++ K
Sbjct: 322 ANSEQRP---FLRDSLVELCSQDVQKSYTKASVSITQLAKLLKMALATKNKE-------- 370
Query: 438 AYKIVYNWQFCHSLDFWSRVISIQCNPEKENGHESPLRQLIYPLVQVTIGVIRLIPTAQF 497
A + +++ ++ + +D W IS N + L+ L+Y +VQV GV +LI ++
Sbjct: 371 AVEKIHSGEYINCVDLWVNFISA-------NVQDCDLQPLLYTIVQVINGVAQLIIGPRY 423
Query: 498 FPLRFYLIRSLIRLSQNTGIFIPVYPLLSEILS-STAFTKKPRKSTLPAFDFDHNIKCTQ 556
LR I L LS+ +GIFIP+ L+ ++L T + ++ L A +K +
Sbjct: 424 LLLRVKCIHWLNHLSRTSGIFIPIASLVLDMLEYKTTNDGEKQEQKLEAVS---TVKLPK 480
Query: 557 AYLGTKIYQDGLAEQFVDLLGEYFVLYSRSVSFPELTTLAVISLRRYIKNSENVKFNKML 616
+L ++ +Q+ ++LL +F +S +SFP+L T+ V+ L+++ + S +++
Sbjct: 481 NWLKSQNFQEQCIFSVIELLAVHFAQWSFHISFPDLATIPVMRLKKFHERSTMEGLKRVV 540
Query: 617 QNVVDKINQNAQFITKKRSDVDFGPNNRTEVEKFL 651
+ ++++ N +F+ +KR DV F PN++ + F+
Sbjct: 541 KRFIEQVESNIEFVQRKRDDVTFSPNDQQSADTFM 575
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.316 0.132 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,627,720
Number of Sequences: 60738
Number of extensions: 1439711
Number of successful extensions: 5684
Number of sequences better than 1.0e-05: 10
Number of HSP's better than 0.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 5630
Number of HSP's gapped (non-prelim): 16
length of query: 712
length of database: 30,389,216
effective HSP length: 114
effective length of query: 598
effective length of database: 23,465,084
effective search space: 14032120232
effective search space used: 14032120232
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)