ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI0354 good O KOG2689 Posttranslational modification, protein turnover, chaperones Predicted ubiquitin regulatory protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI0354 121988 123166 393
(393 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YBR273c [O] KOG2689 Predicted ubiquitin regulatory protein 233 3e-61
YJL048c [O] KOG2689 Predicted ubiquitin regulatory protein 128 2e-29
CE20713 [O] KOG2689 Predicted ubiquitin regulatory protein 53 7e-07
>YBR273c [O] KOG2689 Predicted ubiquitin regulatory protein
Length = 436
Score = 233 bits (595), Expect = 3e-61
Identities = 142/391 (36%), Positives = 219/391 (55%), Gaps = 33/391 (8%)
Query: 7 LDTHFVSSVENAVQESLRENKALLVYTTGGDNSWFESWFT--PLVGEQLKDSCVWLRLAA 64
L+ F SVE A+ +S++E L VY T D+ W +SWF + + L + +WLRL
Sbjct: 2 LEALFRDSVEEAINDSIKEGVVLAVYNTARDDQWLKSWFKGDDVSLDTLAEHSIWLRLVK 61
Query: 65 GSREMGYFEQIFPDVKVPSVYCIAKGQIVEMINPDQLDMDGFATRLIRAVGKSKRRISET 124
+ + FEQ+FP+V VPS+Y I G+I +I + D +L+ +G ++ E+
Sbjct: 62 DTEQFQLFEQVFPNVVVPSIYLIRAGKIELIIQGED---DRHWEKLLACIGIKDKKAGES 118
Query: 125 DAVDASNTVGAAGDTGARSGSCLSQNAKLMEYQIKAKKHQLTEQ-----QERERIVRLMK 179
+ + +N A + +R + ++ E ++ ++ + +Q +ERERI+RL++
Sbjct: 119 SSRE-TNPGLAREEKSSRDVHRKNARERIAETTLEIQRREQLKQRKLAEEERERIIRLVR 177
Query: 180 ADREEMKQRRLSSSSPNHTKEHINEVLAVPIHDNIKNRDIINAAVCTLLIRLTDGKTLKN 239
ADR E K + H + +++ + +HD IK+ ++++ C L IR+TDGKTLK+
Sbjct: 178 ADRAERK-----ALDETHHRT-LDDDKPLDVHDYIKDAQKLHSSKCVLQIRMTDGKTLKH 231
Query: 240 DFDSSQTLNDVRTWVDANRTDKDGPYQFHRSIPRETFTESQELLSLKALELTPRSALILK 299
+F+SS+TLNDVR WVD NRTD D PY FHR IPR TF +S EL +L+ LELTPRSAL+LK
Sbjct: 232 EFNSSETLNDVRKWVDVNRTDGDCPYSFHRGIPRVTFKDSDELKTLETLELTPRSALLLK 291
Query: 300 PLEKHTYSRKIADVEGPGLLGKMYQNVTSWWYGKSTVVDQNIPEPAEALTSQASSRYVSP 359
PLE + +EGP LLG++Y+ ++WW+ N +P +TSQ
Sbjct: 292 PLETQNSGLSVTGMEGPSLLGRLYKGFSTWWH--------NDKDP--EVTSQREE----- 336
Query: 360 LSSPRLVHSDASIP-SRAVSPSSIHYGHVSD 389
S P +S P S A S S Y +V +
Sbjct: 337 TSKPNRHEVRSSTPLSGAASSSCFQYNNVRE 367
>YJL048c [O] KOG2689 Predicted ubiquitin regulatory protein
Length = 396
Score = 128 bits (321), Expect = 2e-29
Identities = 87/333 (26%), Positives = 150/333 (44%), Gaps = 42/333 (12%)
Query: 1 MNTMDTLDTHFVSSVENAVQESLRENKALLVYTTGGDNSWFESWFTP-LVGEQLKDSCVW 59
M M +D+ F V + + + + + + GDNSW WF P + ++ +++ +W
Sbjct: 1 MYEMSGIDSLFHDRVVHDYSHTSEQVIVVYISSAAGDNSWLHQWFKPGNLSDEERENILW 60
Query: 60 LRLAAGSREMGYFEQIFPDVKVPSVYCIAKGQIVEMINPDQL--DMDGFATRLIRAVGKS 117
+RL G++E F+ IFP PS+ + G + I + L + D + T +
Sbjct: 61 VRLVNGTKECLLFKSIFPSSSAPSINILQNGLLECSIQGNSLSREQDPWETFINGLQSVF 120
Query: 118 KRRISETDAVDASNTVGAAGDTGARSGSCLSQNAKLMEYQIKAKKHQLTEQQERERIVRL 177
K ++++ SN +E +R+ R+
Sbjct: 121 KGQVTKRKLFSKSN-------------------------------------EEYQRVKRM 143
Query: 178 MKADREEMKQRRLSSSSPNHTKEHINEVLAVPIHDNIKNRDIINAAVCTLLIRLTDGKTL 237
++ D+ E K +++ P + ++ + + CTL ++L +G T+
Sbjct: 144 IQNDKLERKYVFQNTNDPQRKPQKWKQLTVTDNVSYKSQKGFLAQNYCTLQLKLPNGYTI 203
Query: 238 KNDFDSSQTLNDVRTWVDANRTDKDGPYQFHRSIPRETFTESQELLSLKALELTPRSALI 297
N F L+ VR W+D N D PY FHR+IPR T T + EL SL+ L+L PRS LI
Sbjct: 204 SNTFPPQTKLHKVRMWLDYNCYDDGTPYLFHRNIPRVTLTRNDELKSLQELDLLPRSTLI 263
Query: 298 LKPLEKHTYSRKIADVEGPGLLGKMYQNVTSWW 330
L+PLE + ++ +E LL K+Y +TS+W
Sbjct: 264 LEPLEAN--NKTFDYMEQSSLLHKVYSGLTSFW 294
>CE20713 [O] KOG2689 Predicted ubiquitin regulatory protein
Length = 299
Score = 53.1 bits (126), Expect = 7e-07
Identities = 36/151 (23%), Positives = 69/151 (44%), Gaps = 11/151 (7%)
Query: 148 SQNAKLMEYQIKAKKHQLTEQQERERIVRLMKADREEMKQRRLSSSSPNHTKEHINEVLA 207
+++ ++ E ++ + ++ R+R++ ++ D+E K + P +A
Sbjct: 156 ARDREIREAAQDRRREKNEDEIARKRVLEQIRLDKEARKAKASGQPVPEAKPAPSAAPVA 215
Query: 208 VPIHDNIKNRDIINAAVCTLLIRLTDGKTLKNDFDSSQTLNDVRTWVDANRTDKDGPYQF 267
P + + TL RL DG+T++ F++++ L VR WV+ N + P+
Sbjct: 216 PPK----------DYSTTTLQFRLLDGQTVRQQFEANEPLAMVRAWVETNHAN-GVPFTL 264
Query: 268 HRSIPRETFTESQELLSLKALELTPRSALIL 298
PR+ FTE LK L L P + +IL
Sbjct: 265 MTPFPRKVFTEDDMGTPLKVLNLVPSANVIL 295
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.314 0.130 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,523,586
Number of Sequences: 60738
Number of extensions: 991765
Number of successful extensions: 2779
Number of sequences better than 1.0e-05: 3
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2770
Number of HSP's gapped (non-prelim): 4
length of query: 393
length of database: 30,389,216
effective HSP length: 108
effective length of query: 285
effective length of database: 23,829,512
effective search space: 6791410920
effective search space used: 6791410920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)