ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI0555 good UO KOG1373 Intracellular trafficking, secretion, and vesicular transport Transport protein Sec61, alpha subunit
r_klactVI0555 good UO KOG1373 Posttranslational modification, protein turnover, chaperones Transport protein Sec61, alpha subunit
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI0555 Similar to YBR283c SP|P38353 SSH1 involved in
co-translational pathway of protein transport {P2.234.f2.1}
(479 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YBR283c [UO] KOG1373 Transport protein Sec61 alpha subunit 493 e-139
At1g29310 [UO] KOG1373 Transport protein Sec61 alpha subunit 207 3e-53
At2g34250 [UO] KOG1373 Transport protein Sec61 alpha subunit 206 8e-53
Hs7019415 [UO] KOG1373 Transport protein Sec61 alpha subunit 205 1e-52
YLR378c [UO] KOG1373 Transport protein Sec61 alpha subunit 203 4e-52
SPBC354.02c [UO] KOG1373 Transport protein Sec61 alpha subunit 203 5e-52
Hs14589847 [UO] KOG1373 Transport protein Sec61 alpha subunit 203 5e-52
CE14954 [UO] KOG1373 Transport protein Sec61 alpha subunit 202 7e-52
At1g78720 [UO] KOG1373 Transport protein Sec61 alpha subunit 197 4e-50
7297121 [UO] KOG1373 Transport protein Sec61 alpha subunit 167 2e-41
ECU09g0130 [UO] KOG1373 Transport protein Sec61 alpha subunit 129 1e-29
SPBC19G7.17 [UO] KOG1373 Transport protein Sec61 alpha subunit 91 3e-18
Hs17449156 [UO] KOG1373 Transport protein Sec61 alpha subunit 46 1e-04
At4g05130 [F] KOG1479 Nucleoside transporter 33 0.72
At3g03440 [S] KOG0167 FOG: Armadillo/beta-catenin-like repeats 32 1.6
>YBR283c [UO] KOG1373 Transport protein Sec61 alpha subunit
Length = 490
Score = 493 bits (1270), Expect = e-139
Identities = 249/480 (51%), Positives = 332/480 (68%), Gaps = 5/480 (1%)
Query: 1 MIDLAKPFLAFVPEIELPYDNLPFDDKLVITLTTALIYLFGQFPLAGITKESV-DVKDPI 59
+ID+ KP L +PE+ELP++ LPFDDK+V T+ LIYLF QFPL G+ K + +V DPI
Sbjct: 6 LIDIVKPILPILPEVELPFEKLPFDDKIVYTIFAGLIYLFAQFPLVGLPKATTPNVNDPI 65
Query: 60 FFLRGVFAAEPRTLLEFGIFPPIATALILQLLAGFKLIKVNFNQRTDRELFQTLIKIVSI 119
+FLRGVF EPRTLLEFG+FP I++ LILQLLAG K+IKVNF ++DRELFQ+L K+ +I
Sbjct: 66 YFLRGVFGCEPRTLLEFGLFPNISSGLILQLLAGLKVIKVNFKIQSDRELFQSLTKVFAI 125
Query: 120 GSYAILANIFIASGYYGEDLSLMAKFLINSQLIGAGFFVTLLIEVIDKGHGFASGAMAII 179
Y IL NIFI +GY+G+DLS++ LIN QL+GAG F TLL EVIDKG GF+SGAM I
Sbjct: 126 VQYVILTNIFIFAGYFGDDLSVVQIGLINFQLVGAGIFTTLLAEVIDKGFGFSSGAMIIN 185
Query: 180 AISLSTGLVDDLFGVQQIPVGQEGHREPRGAVINLLQGFRAKHKTFLGALVNAFQRDYLP 239
+ ++T LV D FGV QI VG++ E +GA+INL+QG R+KHKTF+G +++AF RDYLP
Sbjct: 186 TVVIATNLVADTFGVSQIKVGEDDQTEAQGALINLIQGLRSKHKTFIGGIISAFNRDYLP 245
Query: 240 NLTSGLLVIVLGGTVCYLQNIRTELSIRSTKARGMSNVYPIRLLYTXXXXXXXXXXXXXX 299
NLT+ ++V+ + VCYLQ++R EL IRST+ARG +NVYPI+LLYT
Sbjct: 246 NLTTTIIVLAIAIIVCYLQSVRVELPIRSTRARGTNNVYPIKLLYTGCLSVLFSYTILFY 305
Query: 300 XHILGFVIIQLIGGNQEGSIINKVLGGYE-STEFFYLARFPLSLLTPPTSFF-AVFKQPL 357
HI FV+IQL+ N+ II K++G YE + + FPLSLL PPTSFF V +QPL
Sbjct: 306 IHIFAFVLIQLVAKNEPTHIICKIMGHYENANNLLAVPTFPLSLLAPPTSFFKGVTQQPL 365
Query: 358 TVVTFSAFLIVTGVWFATNWQEISGSSSRDVSKQFKEQDVALAGHRD--ASKELIRIIPX 415
T +T+SAF++VTG+WFA WQ ISGSS+RDV+ +FK+Q + L G R+ +KEL ++IP
Sbjct: 366 TFITYSAFILVTGIWFADKWQAISGSSARDVALEFKDQGITLMGRREQNVAKELNKVIPI 425
Query: 416 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSAFAILEVVTVDFQQTGGQSSIAQMLG 475
F++LEV+T+++QQ+GGQS++ Q+LG
Sbjct: 426 AAVTGASVLSLITVIGESLGLKGKAAGIVVGIAGGFSLLEVITIEYQQSGGQSALNQVLG 485
>At1g29310 [UO] KOG1373 Transport protein Sec61 alpha subunit
Length = 475
Score = 207 bits (527), Expect = 3e-53
Identities = 144/423 (34%), Positives = 217/423 (51%), Gaps = 19/423 (4%)
Query: 1 MIDLAKPFLAFVPEIELPYDNLPFDDKLVITLTTALIYLF-GQFPLAGITKESVDVKDPI 59
++ L +PFLAF+PE++ +PF +K++ T+ + I+L Q PL GI S DP
Sbjct: 7 VLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGI--HSTTGADPF 64
Query: 60 FFLRGVFAAEPRTLLEFGIFPPIATALILQLLAGFKLIKVNFNQRTDRELFQTLIKIVSI 119
+++R + A+ T++E GI P + + L++QLLAG K+I+V+ N R DR L K++ I
Sbjct: 65 YWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLWI 124
Query: 120 GSYAILANIFIASGYYGE--DLSLMAKFLINSQLIGAGFFVTLLIEVIDKGHGFASGAMA 177
S A ++ SG YG L + LI QL AG V L E++ KG+G SG
Sbjct: 125 LSAIGEAVAYVLSGMYGPVGQLGVGNAILIILQLFFAGIIVICLDELLQKGYGLGSGISL 184
Query: 178 IIAISLSTGLVDDLFGVQQIPVGQEGHREPRGAVINLLQGFRAKHKTFLGALVNAFQRDY 237
IA ++ ++ F I G+ E GAVI L K + AL AF R
Sbjct: 185 FIATNICESIIWKAFSPTTINTGRGAEFE--GAVIALFHMLITKSNK-VAALRQAFYRQN 241
Query: 238 LPNLTSGLLVIVLGGTVCYLQNIRTELSIRSTKARGMSNVYPIRLLYTXXXXXXXXXXXX 297
LPN+T+ L +++ V Y Q R L +RS ARG YPI+L YT
Sbjct: 242 LPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKSARGQQGSYPIKLFYTSNMPIILQSALV 301
Query: 298 XXXHILGFVIIQLIGGNQEGSIINKVLGGYESTEFFYLARFPLS----LLTPPTSFFAVF 353
+ I QL+ G+ +LG ++ +E+ + P+S L+T P SF +
Sbjct: 302 SNL----YFISQLLYRKFSGNFFVNLLGQWKESEYSGQS-IPVSGLAYLITAPASFADMA 356
Query: 354 KQPLTVVTFSAFLIVTGVWFATNWQEISGSSSRDVSKQFKEQDVALAGHRDAS--KELIR 411
P + + F++ F+ W E+SGSS+RDV+KQ KEQ + + GHR+++ KEL R
Sbjct: 357 AHPFHALFYIVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNR 416
Query: 412 IIP 414
IP
Sbjct: 417 YIP 419
>At2g34250 [UO] KOG1373 Transport protein Sec61 alpha subunit
Length = 475
Score = 206 bits (523), Expect = 8e-53
Identities = 141/423 (33%), Positives = 216/423 (50%), Gaps = 19/423 (4%)
Query: 1 MIDLAKPFLAFVPEIELPYDNLPFDDKLVITLTTALIYLF-GQFPLAGITKESVDVKDPI 59
++ L +PFLAF+PE++ +PF +K++ T+ + I+L Q PL GI S DP
Sbjct: 7 VLHLVRPFLAFLPEVQSADRKVPFREKVIYTVISLFIFLVCSQLPLYGI--HSTTGADPF 64
Query: 60 FFLRGVFAAEPRTLLEFGIFPPIATALILQLLAGFKLIKVNFNQRTDRELFQTLIKIVSI 119
+++R + A+ T++E GI P + + L++QLLAG K+I+V+ N R DR L K++ I
Sbjct: 65 YWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGI 124
Query: 120 GSYAILANIFIASGYYGE--DLSLMAKFLINSQLIGAGFFVTLLIEVIDKGHGFASGAMA 177
A ++ SG YG L + LI QL AG V L E++ KG+G SG
Sbjct: 125 LIAIGEAVAYVLSGMYGPVGQLGVGNAILIILQLFFAGIIVICLDELLQKGYGLGSGISL 184
Query: 178 IIAISLSTGLVDDLFGVQQIPVGQEGHREPRGAVINLLQGFRAKHKTFLGALVNAFQRDY 237
IA ++ ++ F I G+ E GAVI L K + AL AF R
Sbjct: 185 FIATNICESIIWKAFSPTTINTGRGAEFE--GAVIALFHMLITKSNK-VAALRQAFYRQN 241
Query: 238 LPNLTSGLLVIVLGGTVCYLQNIRTELSIRSTKARGMSNVYPIRLLYTXXXXXXXXXXXX 297
LPN+T+ L +++ V Y Q R L +RS ARG YPI+L YT
Sbjct: 242 LPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSALV 301
Query: 298 XXXHILGFVIIQLIGGNQEGSIINKVLGGYESTEFFYLARFPLS----LLTPPTSFFAVF 353
+ + ++ + GN +LG ++ +E+ + P+S L+T P SF +
Sbjct: 302 SNLYFISQLLYRKFSGN----FFVNLLGQWKESEYSGQS-IPVSGLAYLITAPASFSDMA 356
Query: 354 KQPLTVVTFSAFLIVTGVWFATNWQEISGSSSRDVSKQFKEQDVALAGHRDAS--KELIR 411
P + + F++ F+ W E+SGSS+RDV+KQ KEQ + + GHR+++ KEL R
Sbjct: 357 AHPFHALFYIVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNR 416
Query: 412 IIP 414
IP
Sbjct: 417 YIP 419
>Hs7019415 [UO] KOG1373 Transport protein Sec61 alpha subunit
Length = 476
Score = 205 bits (522), Expect = 1e-52
Identities = 146/427 (34%), Positives = 221/427 (51%), Gaps = 28/427 (6%)
Query: 2 IDLAKPFLAFVPEIELPYDNLPFDDKLVITLTTALIYLFG-QFPLAGITKESVDVKDPIF 60
+++ KPF +PEI+ P + F +K++ T T I+L Q PL GI S D DP +
Sbjct: 6 LEVIKPFCVILPEIQKPERKIQFKEKVLWTAITLFIFLVCCQIPLFGIM--SSDSADPFY 63
Query: 61 FLRGVFAAEPRTLLEFGIFPPIATALILQLLAGFKLIKVNFNQRTDRELFQTLIK----I 116
++R + A+ TL+E GI P + + LI+QLLAG K+I+V + DR LF K I
Sbjct: 64 WMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFGMI 122
Query: 117 VSIGSYAILANIFIASGYYGEDLSLMAKF--LINSQLIGAGFFVTLLIEVIDKGHGFASG 174
++IG + +++ +G YG+ + A LI QL AG V LL E++ KG+G SG
Sbjct: 123 ITIGQ----SIVYVMTGMYGDPSEMGAGICLLITIQLFVAGLIVLLLDELLQKGYGLGSG 178
Query: 175 AMAIIAISLSTGLVDDLFGVQQIPVGQEGHREPRGAVINLLQGFRAKHKTFLGALVNAFQ 234
IA ++ +V F + G+ E GA+I L A + AL AF
Sbjct: 179 ISLFIATNICETIVWKAFSPTTVNTGRG--MEFEGAIIALFH-LLATRTDKVRALREAFY 235
Query: 235 RDYLPNLTSGLLVIVLGGTVCYLQNIRTELSIRSTKARGMSNVYPIRLLYTXXXXXXXXX 294
R LPNL + + I + V Y Q R +L I+S + RG N YPI+L YT
Sbjct: 236 RQNLPNLMNLIATIFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQS 295
Query: 295 XXXXXXHILGFVIIQLIGGNQEGSIINKVLGGYESTEFFYLAR-FPLS----LLTPPTSF 349
+VI Q++ G+++ +LG + T AR +P+ L+PP SF
Sbjct: 296 ALVSNL----YVISQMLSARFSGNLLVSLLGTWSDTSSGGPARAYPVGGLCYYLSPPESF 351
Query: 350 FAVFKQPLTVVTFSAFLIVTGVWFATNWQEISGSSSRDVSKQFKEQDVALAGHRDAS--K 407
+V + P+ V + F++ + +F+ W E+SGSS++DV+KQ KEQ + + GHR+ S
Sbjct: 352 GSVLEDPVHAVVYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETSMVH 411
Query: 408 ELIRIIP 414
EL R IP
Sbjct: 412 ELNRYIP 418
>YLR378c [UO] KOG1373 Transport protein Sec61 alpha subunit
Length = 480
Score = 203 bits (517), Expect = 4e-52
Identities = 144/422 (34%), Positives = 218/422 (51%), Gaps = 16/422 (3%)
Query: 1 MIDLAKPFLAFVPEIELPYDNLPFDDKLVITLTTALIYLF-GQFPLAGITKESVDVKDPI 59
++DL KPF +F+PE+ P +P++ KL+ T + LI+L GQ PL GI S + DP+
Sbjct: 6 VLDLFKPFESFLPEVIAPERKVPYNQKLIWTGVSLLIFLILGQIPLYGIV--SSETSDPL 63
Query: 60 FFLRGVFAAEPRTLLEFGIFPPIATALILQLLAGFKLIKVNFNQRTDRELFQTLIKIVSI 119
++LR + A+ TLLE G+ P I +++I Q L G +L+++ + DRELFQ K+ +I
Sbjct: 64 YWLRAMLASNRGTLLELGVSPIITSSMIFQFLQGTQLLQIRPESKQDRELFQIAQKVCAI 123
Query: 120 GSYAILANIFIASGYYG--EDLSLMAKFLINSQLIGAGFFVTLLIEVIDKGHGFASGAMA 177
A + + +G YG DL L L+ QL+ A V LL E++ KG+G SG
Sbjct: 124 ILILGQALVVVMTGNYGAPSDLGLPICLLLIFQLMFASLIVMLLDELLSKGYGLGSG--- 180
Query: 178 IIAISLSTGLVDDLFGVQQIP--VGQEGHREPRGAVINLLQGFRAKHKTFLGALVNAFQR 235
I++ +T + + +F P V +E GAVI A K ALV AF R
Sbjct: 181 -ISLFTATNIAEQIFWRAFAPTTVNSGRGKEFEGAVIAFFH-LLAVRKDKKRALVEAFYR 238
Query: 236 DYLPNLTSGLLVIVLGGTVCYLQNIRTELSIRSTKARGMSNVYPIRLLYTXXXXXXXXXX 295
LPN+ L+ + + V YLQ R EL IRSTK RG +YPI+L YT
Sbjct: 239 TNLPNMFQVLMTVAIFLFVLYLQGFRYELPIRSTKVRGQIGIYPIKLFYTSNTPIMLQSA 298
Query: 296 XXXXXHILGFVIIQLIGGNQEGSIINKVLGGYESTEFFYLARFPLS-LLTPPTSFFAVFK 354
++ ++ Q N +I V G T+ +A L+ + P S
Sbjct: 299 LTSNIFLISQILFQKYPTNPLIRLIG-VWGIRPGTQGPQMALSGLAYYIQPLMSLSEALL 357
Query: 355 QPLTVVTFSAFLIVTGVWFATNWQEISGSSSRDVSKQFKEQDVALAGHRDAS--KELIRI 412
P+ + + F++ + F+ W EISG+S RD++KQFK+Q + + G R+ S +EL +I
Sbjct: 358 DPIKTIVYITFVLGSCAVFSKTWIEISGTSPRDIAKQFKDQGMVINGKRETSIYRELKKI 417
Query: 413 IP 414
IP
Sbjct: 418 IP 419
>SPBC354.02c [UO] KOG1373 Transport protein Sec61 alpha subunit
Length = 479
Score = 203 bits (516), Expect = 5e-52
Identities = 147/426 (34%), Positives = 214/426 (49%), Gaps = 27/426 (6%)
Query: 2 IDLAKPFLAFVPEIELPYDNLPFDDKLVITLTTALIYL-FGQFPLAGITKESVDVKDPIF 60
+DL KPF F+PEI P +PF K++ T T LI+L Q PL GI S D DP+
Sbjct: 7 LDLVKPFAPFLPEIAAPERKVPFKQKMLWTGVTLLIFLVMSQVPLYGIV--SSDSSDPLL 64
Query: 61 FLRGVFAAEPRTLLEFGIFPPIATALILQLLAGFKLIKVNFNQRTDRELFQTLIKIVSIG 120
+LR + AA TL+E GI P + +++++QLL G +LI+VN ++DRE++Q + K ++I
Sbjct: 65 WLRMILAANRGTLMELGISPIVTSSMLVQLLVGSQLIEVNMELKSDREMYQLVQKFLAII 124
Query: 121 SYAILANIFIASGYYG--EDLSLMAKFLINSQLIGAGFFVTLLIEVIDKGHGFASGAMAI 178
A ++ +G YG +DL L+ QL A V LL E++ KG+G SG
Sbjct: 125 IAFGQATAYVLTGMYGRPQDLGAGICLLLILQLAAASLIVLLLDELLQKGYGLGSGISLF 184
Query: 179 IAISLSTGLVDDLFGVQQIPVGQEGHREPRGAVINLLQ-GFRAKHKTFLGALVNAFQRD- 236
IA + F + E GAVIN + F +K AL AF R
Sbjct: 185 IATINCENIFWKAFSPTTYHIANGVQFE--GAVINFVYVMFTWDNKA--AALYQAFFRSG 240
Query: 237 ------YLPNLTSGLLVIVLGGTVCYLQNIRTELSIRSTKARGMSNVYPIRLLYTXXXXX 290
LPNL + +++ G V YLQ+ R E+ IRS K RG + +P++LLYT
Sbjct: 241 LTSSQIQLPNLWNFFATLLVFGVVIYLQDFRVEIPIRSQKFRGYRSTFPVKLLYTSNTPI 300
Query: 291 XXXXXXXXXXHILGFVIIQLIGGNQEGSIINKVLGGYESTEFFYLARFPLSLLTPPTSFF 350
F +L+ + + + LG +E T L+ + L+PP SF
Sbjct: 301 MLQSALTSNL----FFASRLLFNRFSSNFLVRFLGVWEQTATSGLSYY----LSPPASFQ 352
Query: 351 AVFKQPLTVVTFSAFLIVTGVWFATNWQEISGSSSRDVSKQFKEQDVALAGHRDAS--KE 408
P+ + + F + F+ W E+SG+S RDV+KQ K Q + +AGHR+ S KE
Sbjct: 353 DALIDPIHTLVYVFFTMFACALFSKLWIEVSGASPRDVAKQLKSQQLVMAGHREGSMYKE 412
Query: 409 LIRIIP 414
L RIIP
Sbjct: 413 LKRIIP 418
>Hs14589847 [UO] KOG1373 Transport protein Sec61 alpha subunit
Length = 476
Score = 203 bits (516), Expect = 5e-52
Identities = 149/427 (34%), Positives = 221/427 (50%), Gaps = 28/427 (6%)
Query: 2 IDLAKPFLAFVPEIELPYDNLPFDDKLVITLTTALIYLFG-QFPLAGITKESVDVKDPIF 60
+++ KPF A +PEI+ P + F +K++ T T I+L Q PL GI S D DP +
Sbjct: 6 LEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIM--SSDSADPFY 63
Query: 61 FLRGVFAAEPRTLLEFGIFPPIATALILQLLAGFKLIKVNFNQRTDRELFQTLIK----I 116
++R + A+ TL+E GI P + + LI+QLLAG K+I+V + DR LF K I
Sbjct: 64 WMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFGMI 122
Query: 117 VSIGSYAILANIFIASGYYGEDLSLMAKF--LINSQLIGAGFFVTLLIEVIDKGHGFASG 174
++IG A +++ +G YG+ + A LI QL AG V LL E++ KG+G SG
Sbjct: 123 ITIGQ----AIVYVMTGMYGDPAEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSG 178
Query: 175 AMAIIAISLSTGLVDDLFGVQQIPVGQEGHREPRGAVINLLQGFRAKHKTFLGALVNAFQ 234
IA ++ +V F I G+ E GAVI L A + AL AF
Sbjct: 179 ISLFIATNICETIVWKAFSPTTINTGRGTEFE--GAVIALFH-LLATRTDKVRALREAFY 235
Query: 235 RDYLPNLTSGLLVIVLGGTVCYLQNIRTELSIRSTKARGMSNVYPIRLLYTXXXXXXXXX 294
R LPNL + + + + V Y Q R +L I+S + RG + YPI+L YT
Sbjct: 236 RQNLPNLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQS 295
Query: 295 XXXXXXHILGFVIIQLIGGNQEGSIINKVLGGYESTEFFYLAR-FPLS----LLTPPTSF 349
+VI Q++ G+ + +LG + AR +P+ L+PP S
Sbjct: 296 ALVSNL----YVISQMLSVRFSGNFLVNLLGQWADVSGGGPARSYPVGGLCYYLSPPESM 351
Query: 350 FAVFKQPLTVVTFSAFLIVTGVWFATNWQEISGSSSRDVSKQFKEQDVALAGHRDAS--K 407
A+F+ P+ VV + F++ + +F+ W E+SGSS++DV+KQ KEQ + + GHRD S
Sbjct: 352 GAIFEDPVHVVVYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRDTSMVH 411
Query: 408 ELIRIIP 414
EL R IP
Sbjct: 412 ELNRYIP 418
>CE14954 [UO] KOG1373 Transport protein Sec61 alpha subunit
Length = 473
Score = 202 bits (515), Expect = 7e-52
Identities = 149/480 (31%), Positives = 225/480 (46%), Gaps = 25/480 (5%)
Query: 2 IDLAKPFLAFVPEIELPYDNLPFDDKLVITLTTALIYLFG-QFPLAGITKESVDVKDPIF 60
++ KPF FVPE+ P + F +K++ T T ++L Q PL GI S D DP +
Sbjct: 6 LEFVKPFCGFVPEVSKPERKIQFREKMLWTAITLFVFLVCCQIPLFGIM--STDSADPFY 63
Query: 61 FLRGVFAAEPRTLLEFGIFPPIATALILQLLAGFKLIKVNFNQRTDRELFQTLIKIVSIG 120
+LR + A+ TL+E GI P + + LI+QLLAG K+I+V + DR LF K+ +
Sbjct: 64 WLRVIMASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFGMV 122
Query: 121 SYAILANIFIASGYYGEDLSLMAKF--LINSQLIGAGFFVTLLIEVIDKGHGFASGAMAI 178
A +++ SG YGE + A LI QL+ AG V LL E++ KG+G SG
Sbjct: 123 ITVGQAIVYVMSGLYGEPSEIGAGICLLIVVQLVIAGLIVLLLDELLQKGYGLGSGISLF 182
Query: 179 IAISLSTGLVDDLFGVQQIPVGQEGHREPRGAVINLLQGFRAKHKTFLGALVNAFQRDYL 238
IA ++ +V F + G+ E GAVI L A + AL AF R L
Sbjct: 183 IATNICETIVWKAFSPATMNTGRGTEFE--GAVIALFH-LLATRSDKVRALREAFYRQNL 239
Query: 239 PNLTSGLLVIVLGGTVCYLQNIRTELSIRSTKARGMSNVYPIRLLYTXXXXXXXXXXXXX 298
PNL + + ++ V Y Q R +L I+S + RG + YPI+L YT
Sbjct: 240 PNLMNLMATFLVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVS 299
Query: 299 XXHILGFVIIQLIGGNQEGSIINKVLG------GYESTEFFYLARFPLSLLTPPTSFFAV 352
+VI Q++ G G+ +LG GY S L + L+PP S +
Sbjct: 300 NL----YVISQMLAGKFGGNFFINLLGTWSDNTGYRSYPTGGLCYY----LSPPESLGHI 351
Query: 353 FKQPLTVVTFSAFLIVTGVWFATNWQEISGSSSRDVSKQFKEQDVALAGHRDAS--KELI 410
F+ P+ + + F++ + +F+ W ++SGSS++DV+KQ KEQ + + GHR+ S EL
Sbjct: 352 FEDPIHCIIYIVFMLGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHREKSMIHELN 411
Query: 411 RIIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSAFAILEVVTVDFQQTGGQSSI 470
R IP + E+ + Q+ GG S++
Sbjct: 412 RYIPTAAAFGGLCIGALSVTADFMGAIGSGTGILLAVTIIYQYFEIFVKEQQEMGGVSAM 471
>At1g78720 [UO] KOG1373 Transport protein Sec61 alpha subunit
Length = 475
Score = 197 bits (500), Expect = 4e-50
Identities = 133/423 (31%), Positives = 215/423 (50%), Gaps = 19/423 (4%)
Query: 1 MIDLAKPFLAFVPEIELPYDNLPFDDKLVITLTTALIYLF-GQFPLAGITKESVDVKDPI 59
+I L +PFLAF+PE++ P +PF +K++ T+ + I+L Q PL GI S DP
Sbjct: 7 VIHLVRPFLAFLPEVQSPERKIPFREKVIYTVISLFIFLVCSQLPLYGI--HSTTGADPF 64
Query: 60 FFLRGVFAAEPRTLLEFGIFPPIATALILQLLAGFKLIKVNFNQRTDRELFQTLIKIVSI 119
+++R + A+ T++E GI P + + +++QLLAG K+I+++ N R DR L K++ I
Sbjct: 65 YWMRVILASSRGTVMELGITPIVTSGMVMQLLAGSKIIEIDNNVREDRALLNGAQKLLGI 124
Query: 120 GSYAILANIFIASGYYGE--DLSLMAKFLINSQLIGAGFFVTLLIEVIDKGHGFASGAMA 177
A ++ SG YG +L + LI QL A V L E++ KG+G SG
Sbjct: 125 LIAVGQAVAYVLSGMYGSVGELGVGNAILIIVQLCFAAIIVLCLDELLQKGYGLGSGISL 184
Query: 178 IIAISLSTGLVDDLFGVQQIPVGQEGHREPRGAVINLLQGFRAKHKTFLGALVNAFQRDY 237
IA ++ ++ F I G+ E GAVI L + AL AF R
Sbjct: 185 FIATNICESIIWKAFSPTTINSGRGAQFE--GAVIALFH-LLITRTDKVRALREAFFRQN 241
Query: 238 LPNLTSGLLVIVLGGTVCYLQNIRTELSIRSTKARGMSNVYPIRLLYTXXXXXXXXXXXX 297
LPN+T+ +++ V Y Q R L +RS ARG YPI+L YT
Sbjct: 242 LPNVTNLHATVLIFLIVIYFQGFRVVLPVRSKNARGQRGSYPIKLFYTSNMPIILQSALV 301
Query: 298 XXXHILGFVIIQLIGGNQEGSIINKVLGGYESTEFFYLARFPLS----LLTPPTSFFAVF 353
+ + ++ + GGN + ++G ++ +E+ + P+ +T P+S +
Sbjct: 302 SNIYFISQILYRKFGGN----FLVNLIGTWKESEYSGQS-IPVGGIAYYITAPSSLAEMA 356
Query: 354 KQPLTVVTFSAFLIVTGVWFATNWQEISGSSSRDVSKQFKEQDVALAGHRDAS--KELIR 411
P + + F++ F+ W E+SGSS++DV++Q +EQ + + GHRD++ KEL R
Sbjct: 357 THPFHALFYLVFMLAACALFSKTWIEVSGSSAKDVARQLREQQMVMPGHRDSNLQKELNR 416
Query: 412 IIP 414
IP
Sbjct: 417 YIP 419
>7297121 [UO] KOG1373 Transport protein Sec61 alpha subunit
Length = 423
Score = 167 bits (424), Expect = 2e-41
Identities = 121/372 (32%), Positives = 186/372 (49%), Gaps = 17/372 (4%)
Query: 52 SVDVKDPIFFLRGVFAAEPRTLLEFGIFPPIATALILQLLAGFKLIKVNFNQRTDRELFQ 111
S D DP +++R + A+ TL+E GI P + + LI+QLLAG K+I+V + DR LF
Sbjct: 2 SSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFN 60
Query: 112 TLIKIVSIGSYAILANIFIASGYYGEDLSLMAK--FLINSQLIGAGFFVTLLIEVIDKGH 169
K+ + A +++ +G YG+ + A LI QL AG V LL E++ KG+
Sbjct: 61 GAQKLFGMVITIGQAIVYVMTGMYGDPSEIGAGVCLLIIIQLFAAGLIVLLLDELLQKGY 120
Query: 170 GFASGAMAIIAISLSTGLVDDLFGVQQIPVGQEGHREPRGAVINLLQGFRAKHKTFLGAL 229
G SG IA ++ +V F + G+ E GAVI L A + AL
Sbjct: 121 GLGSGISLFIATNICETIVWKAFSPTTVTTGRGTEFE--GAVIALFH-LMATRNDKVRAL 177
Query: 230 VNAFQRDYLPNLTSGLLVIVLGGTVCYLQNIRTELSIRSTKARGMSNVYPIRLLYTXXXX 289
AF R LPNL + L +++ V Y Q R +L I+S + RG + YPI+L YT
Sbjct: 178 REAFYRQNLPNLMNLLATVLVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIP 237
Query: 290 XXXXXXXXXXXHILGFVIIQLIGGNQEGSIINKVLGGYESTEFFYLAR-FPLS----LLT 344
+VI Q++ +G+ +LG + AR +P+ L+
Sbjct: 238 IILQSALVSNL----YVISQMLAVKFQGNFFINLLGVWADVGGGGPARSYPIGGLCYYLS 293
Query: 345 PPTSFFAVFKQPLTVVTFSAFLIVTGVWFATNWQEISGSSSRDVSKQFKEQDVALAGHRD 404
PP S + P+ + + F++ + +F+ W ++SGSS++DV+KQ KEQ + + GHR+
Sbjct: 294 PPESVGHILTDPIHALLYIVFMLGSCAFFSKTWIDVSGSSAKDVAKQLKEQHMVMRGHRE 353
Query: 405 AS--KELIRIIP 414
S EL R IP
Sbjct: 354 NSMIHELNRYIP 365
>ECU09g0130 [UO] KOG1373 Transport protein Sec61 alpha subunit
Length = 410
Score = 129 bits (324), Expect = 1e-29
Identities = 103/364 (28%), Positives = 181/364 (49%), Gaps = 23/364 (6%)
Query: 62 LRGVFAAEPRTLLEFGIFPPIATALILQLLAGFKLIKVNFNQRTDRELFQTLIKIVSIGS 121
+R + A+ TL++ G P + ++LI+Q L +++KV+++ + D+ L +++S+
Sbjct: 1 MRAMMASNRGTLMDLGTSPVVTSSLIMQFLTMSEILKVDWSIKEDKNLHNATQRLISLIM 60
Query: 122 YAILANIFIASGYYGEDLSLMAKF--LINSQLIGAGFFVTLLIEVIDKGHGFASGAMAII 179
A + + +G+YG SL + L+ QLI +G + LL E++ KG+G +G I
Sbjct: 61 TVGQALVQVYTGFYGSPKSLGTIYCLLLVVQLIFSGIIIILLDELLQKGYGLGNGVNLFI 120
Query: 180 AISLSTGLVDDLFGVQQIPVGQEGHREPRGAVINLLQGFRAKHKTFLGALVNAFQRDYLP 239
A ++ ++ F + + G+ E G+VI L + F A+ AF R LP
Sbjct: 121 AANVCESIIWKAFSPKVLFTGRGIEFE--GSVIALFHLLVVRKNKF-AAIYEAFFRQNLP 177
Query: 240 NLTSGLLVIVLGGTVCYLQNIRTELSIRSTKARGMSNVYPIRLLYTXXXXXXXXXXXXXX 299
NL S L I+L V YLQ +R EL S++ RG +PI+LLYT
Sbjct: 178 NLFSLLSTILLFVFVIYLQGMRVELPTESSQVRGHVGKFPIKLLYT------STMPIIAQ 231
Query: 300 XHILGFV--IIQLIGGNQEGSIINKVLGGYESTEFFYLARF-PLS----LLTPPTSFFAV 352
+I+G + I + ++ ++LG + +++ R+ P+S +T P S F
Sbjct: 232 SYIVGHISSISSFLYKRWPQYLVVRILGVWNTSKG---GRYMPVSGVSYYITSPESIFEG 288
Query: 353 FKQPLTVVTFSAFLIVTGVWFATNWQEISGSSSRDVSKQFKEQDVALAGHRDA--SKELI 410
F+ PL V + A + +T +T+W E++ S +++ KE + L G R+A + L
Sbjct: 289 FRDPLRFVIYLAIMFLTSAILSTSWLELNELSPEKAAQKLKESRMRLKGVREANTANVLS 348
Query: 411 RIIP 414
R IP
Sbjct: 349 RYIP 352
>SPBC19G7.17 [UO] KOG1373 Transport protein Sec61 alpha subunit
Length = 179
Score = 91.3 bits (225), Expect = 3e-18
Identities = 61/175 (34%), Positives = 89/175 (50%), Gaps = 5/175 (2%)
Query: 2 IDLAKPFLAFVPEIELPYDNLPFDDKLVITLTTALIY-LFGQFPLAGITKESVDVKDPIF 60
I+ KP + +PE+E P +L +KL ++Y + P+ G E D DPI
Sbjct: 7 INFIKPLSSLLPEVEGPKTHLELVEKLGWMAGCVVVYQILSIIPVYGA--EKTDTLDPIN 64
Query: 61 FLRGVFAAEPRTLLEFGIFPPIATALILQLLAGFKLIKVNFNQRTDRELFQTLIKIVSIG 120
R + + L+ G+ P ++ +LQ+LA K I VNFN DR LFQ K+VS
Sbjct: 65 NFRVLDGSSASGLMITGLAPIYLSSFLLQILASKKKIAVNFNLIIDRVLFQNAQKVVSAL 124
Query: 121 SYAILANIFIASGYYG--EDLSLMAKFLINSQLIGAGFFVTLLIEVIDKGHGFAS 173
Y ILA +++SGYYG DL + ++ Q+ G L E+I+KGHG S
Sbjct: 125 LYLILAVTYVSSGYYGSFSDLGIFRFIMLILQIFLPGIVCIYLCEIIEKGHGLGS 179
>Hs17449156 [UO] KOG1373 Transport protein Sec61 alpha subunit
Length = 114
Score = 46.2 bits (108), Expect = 1e-04
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 42 QFPLAGITKESVDVKDPIFFLRGVFAAEPRTL--LEFGIFPPIATALILQLLAGFKLIKV 99
Q PL GI S D DP +++R + A+ TL LE GI P + + LI+QLLAG K+I+V
Sbjct: 28 QIPLFGIM--SSDSVDPFYWMRVILASNRGTLMELELGISPIVMSGLIMQLLAGAKIIEV 85
Query: 100 NFNQRTD---RELFQTLIKIVSIG 120
+ E + L I++IG
Sbjct: 86 GGTPKDQVLINEAQKLLHMIITIG 109
>At4g05130 [F] KOG1479 Nucleoside transporter
Length = 418
Score = 33.5 bits (75), Expect = 0.72
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 82 IATALILQLLAGFKLIKVNFNQRTDRELFQTLIKIVSIGSYAILANIFIASGYYGEDLSL 141
I T IL ++ F LI ++ + + ++ + S+ LA+ + G G DLSL
Sbjct: 85 ILTGYILFTISTFLLIVLDLTTKGHGGIGHYIVLCTIVASFG-LADATVKGGLVG-DLSL 142
Query: 142 MAKFLINSQLIGAGF--FVTLLIEVIDK------GHGFASGAMAIIAIS 182
M LI S + G+G +T ++ +I K + GAM +AIS
Sbjct: 143 MCPELIQSYMAGSGMAGALTSVLRLITKAAFEKSNNSLRKGAMIFLAIS 191
>At3g03440 [S] KOG0167 FOG: Armadillo/beta-catenin-like repeats
Length = 417
Score = 32.3 bits (72), Expect = 1.6
Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 14/140 (10%)
Query: 90 LLAGFKLIKVNFNQRTDRELFQTLIKIVSIGSYAILANIFIASG-----YYGEDLSLMAK 144
LLA L + N ++ F+ + I+ G+ + N ++ Y L ++
Sbjct: 126 LLALLNLAVKDENFVSNFSNFRNKVSIIEAGALEPIINFLQSNSPTLQEYASASLLTLSA 185
Query: 145 FLINSQLIGAGFFVTLLIEVIDKGHGFASGAMAIIAISLSTGLVDDLFGVQQIPVGQEGH 204
N +IGA V LL++VI G A A A++A+S + L D+L +
Sbjct: 186 SANNKPIIGANGVVPLLVKVIKHGSPQAK-ADAVMALSNLSTLPDNLSMILA-------- 236
Query: 205 REPRGAVINLLQGFRAKHKT 224
+P ++NLL+ + KT
Sbjct: 237 TKPLSPILNLLKSSKKSSKT 256
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.326 0.143 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,176,944
Number of Sequences: 60738
Number of extensions: 868491
Number of successful extensions: 2165
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2112
Number of HSP's gapped (non-prelim): 15
length of query: 479
length of database: 30,389,216
effective HSP length: 110
effective length of query: 369
effective length of database: 23,708,036
effective search space: 8748265284
effective search space used: 8748265284
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)