ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactVI0577   suspect: LH   D     KOG2166  Cell cycle control, cell division, chromosome partitioning     Cullins

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactVI0577  195395 193242 -718 
         (718 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YJL047c [D] KOG2166 Cullins                                            65   3e-10

>YJL047c [D] KOG2166 Cullins
          Length = 842

 Score = 65.5 bits (158), Expect = 3e-10
 Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 23/224 (10%)

Query: 497 SSEIS-GLILPEPL----NGMVNKQWEYYKVLDRN-DHKTMSLQCQLNLLELKSPFRHGI 550
           S+E+    +LP+ +    N  +    E  KV D +   K +     L+  E++SP+    
Sbjct: 606 SNEVKKNFVLPQEMDDTWNQFLRNYHEQNKVEDSDASKKELYPMWNLHHCEVESPYIIQD 665

Query: 551 SSEIVILHVNLLQASIFHLFNNSARLSLEQIKNTLTETKHNIPQIDSNMEMFLQMNMFKK 610
            + + I  + L Q  +  LFN S  L+L+ I     +TK     +   ++ F    +  +
Sbjct: 666 GTNL-IFELTLFQTCVLTLFNESDHLTLQVISE---QTKLAYKDLALVLKSFCNYKILTR 721

Query: 611 DSEDCFYLNTKYKPKKEALNDGKLTLYHLPKISPKIMEN-----------DKADNRWFTE 659
           D ++ + +N  +KP  + + +GKL +  LP+ +     N           + ++++W  E
Sbjct: 722 DIDNTYSINESFKPDMKKVKNGKLRVV-LPRTASLQSSNTGGERTSSAHHEGSNSQWTQE 780

Query: 660 IVCACIIRTLKQRRK-CTKTKLFEYVASAFPGISRGEFKDALGR 702
           ++ ACI R++K  R       LFE V     G S GEFKDAL +
Sbjct: 781 LLKACITRSVKSERNGLDYDHLFETVKQQIKGFSVGEFKDALAK 824


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.321    0.137    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,603,109
Number of Sequences: 60738
Number of extensions: 1768136
Number of successful extensions: 4604
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4601
Number of HSP's gapped (non-prelim): 2
length of query: 718
length of database: 30,389,216
effective HSP length: 114
effective length of query: 604
effective length of database: 23,465,084
effective search space: 14172910736
effective search space used: 14172910736
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)