ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI0592 good H KOG3159 Coenzyme transport and metabolism Lipoate-protein ligase A
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI0592 199224 200426 401
(401 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YJL046w [H] KOG3159 Lipoate-protein ligase A 328 1e-89
SPBC17A3.09c [H] KOG3159 Lipoate-protein ligase A 141 1e-33
7302974 [H] KOG3159 Lipoate-protein ligase A 110 3e-24
CE15713 [H] KOG3159 Lipoate-protein ligase A 108 1e-23
Hs7706252 [H] KOG3159 Lipoate-protein ligase A 107 4e-23
>YJL046w [H] KOG3159 Lipoate-protein ligase A
Length = 451
Score = 328 bits (840), Expect = 1e-89
Identities = 166/373 (44%), Positives = 253/373 (67%), Gaps = 23/373 (6%)
Query: 38 ETDEKYKELNNIYRELFTPT-DKANILTTK---DIESNKRSEVDE----INEELNSLYSV 89
+ D+KY ++N++Y +FTP+ D +IL + D ++ K S ++E N++L + Y++
Sbjct: 78 DADDKYHDINSMYENMFTPSNDNVSILQDEGKSDYDTTKASSMEEDISAFNKDLYNFYNI 137
Query: 90 G----VLSPAELEDAVKSNGRFVIRSVSTNPYFNLALEDYVFRNTPLTENKTGNERILLY 145
G ++S ++LE+ VK+ GRFVI+S+ST+PY+NLALE+YVF+NTP + N R+L Y
Sbjct: 138 GYAKQIMSASQLENIVKAKGRFVIQSLSTSPYYNLALENYVFKNTPRAKRGPDNCRLLFY 197
Query: 146 TNDKCVVVGKNQNPWKETYMRNIASRGYNFVRRRSGGGAVVHDLGNVNYSYLTSRESFRR 205
ND+C V+GKNQN W+E + + S+ + +RR SGGG V+HDLGNVNYSYLTSRE F
Sbjct: 198 INDRCAVIGKNQNLWQEVDLAKLKSKNFELLRRFSGGGTVLHDLGNVNYSYLTSREKFET 257
Query: 206 EFFNQQLVQWLSNEN----ITLNDRGDLIYKGYKISGSAFKIAKGKAYHHGTMLIDSDLA 261
+FFN+ +++WL++ N + LN+RGD+I G+KISGSA+KIA GKAYHH TML+++DL
Sbjct: 258 KFFNKMIIKWLNSLNPELRLDLNERGDIIQDGFKISGSAYKIAGGKAYHHATMLLNADLE 317
Query: 262 QFKGLLKPDVIPGVEWTCNSVESVRSKVDNIGGKAISSIDDFCNLITDQFRNLVD-DSEI 320
QF GLL+P + +EW + V SV+SK+ N+G I + + F +++++F+ D EI
Sbjct: 318 QFSGLLEPSLPNNMEWESSGVHSVKSKIKNVG---IITPNQFIAVVSERFQKTFKVDGEI 374
Query: 321 PMFYCDXXXXXXXXXXXXXN-LRSKEWKFMSGPRFEVICND--VTIKVEKGVIIESDWPE 377
P++YCD N L+S++WK+ SGP+F V D +TIKVEKG+I + D +
Sbjct: 375 PIYYCDEFKSINDEIKDAMNTLQSEQWKYFSGPKFSVKIKDKGLTIKVEKGMIYDCDRND 434
Query: 378 LVGMPFYKFYDEV 390
L+G+ F F + +
Sbjct: 435 LIGLEFKGFLENI 447
>SPBC17A3.09c [H] KOG3159 Lipoate-protein ligase A
Length = 363
Score = 141 bits (356), Expect = 1e-33
Identities = 80/188 (42%), Positives = 107/188 (56%), Gaps = 13/188 (6%)
Query: 108 VIRSVSTNPYFNLALEDYVFRNTPLTENKTGNERILLYTNDKCVVVGKNQNPWKETYMRN 167
V+ S NPYFNLALE+Y++ EN T +LLYTN V++G+NQNPW E ++
Sbjct: 27 VVVCKSVNPYFNLALENYLY------ENSTAKHCLLLYTNSPSVIIGRNQNPWVEANVKL 80
Query: 168 IASRGYNFVRRRSGGGAVVHDLGNVNYSYLTSRESFRREFFNQQLVQWLSNENI--TLND 225
N +RR+SGGG V HD GN+NYS L +RE F ++Q L N + LN
Sbjct: 81 CRDNFVNIIRRKSGGGTVFHDFGNLNYSVLMNREEFSHTENASIMIQALRNLGVHARLNQ 140
Query: 226 RGDLI--YKGYKISGSAFKIAKGKAYHHGTMLIDSDLAQFKGLLKPDVIPGVEWTCNSVE 283
R D++ KISGSA+KI++ + YHHGTML++SDL + L+ P V
Sbjct: 141 RHDIVLAQSQRKISGSAYKISRNRCYHHGTMLLNSDLEGVREYLRS---PSTGILSKGVS 197
Query: 284 SVRSKVDN 291
S RS V N
Sbjct: 198 STRSPVSN 205
>7302974 [H] KOG3159 Lipoate-protein ligase A
Length = 394
Score = 110 bits (276), Expect = 3e-24
Identities = 57/155 (36%), Positives = 93/155 (59%), Gaps = 7/155 (4%)
Query: 108 VIRSVSTNPYFNLALEDYVFRNTPLTENKTGNERILLYTNDKCVVVGKNQNPWKETYMRN 167
V S S++ + NLALED++++N + + +LL+ ND CVV+G++QNP+ E +
Sbjct: 58 VFISQSSDVFTNLALEDWLYKNFDFSRHHV----LLLWANDPCVVIGRHQNPFTEANVSQ 113
Query: 168 IASRGYNFVRRRSGGGAVVHDLGNVNYSYLTSRESFRREFFNQQLVQWLSNE---NITLN 224
+ RG RR SGGGAV HDLGN+N ++ + RE + R++ + + L E +N
Sbjct: 114 LVERGITLARRNSGGGAVYHDLGNLNCTFFSPRERYDRKYNLNIVTRALFREWAIKAEIN 173
Query: 225 DRGDLIYKGYKISGSAFKIAKGKAYHHGTMLIDSD 259
+R D++ KISG+A K+ +YHH T+L ++
Sbjct: 174 ERDDIVVMNKKISGTAAKLGHPNSYHHCTILASAN 208
>CE15713 [H] KOG3159 Lipoate-protein ligase A
Length = 912
Score = 108 bits (271), Expect = 1e-23
Identities = 80/257 (31%), Positives = 130/257 (50%), Gaps = 15/257 (5%)
Query: 108 VIRSVSTNPYFNLALEDYVFRNTPLTENKTGNERILLYTNDKCVVVGKNQNPWKETYMRN 167
V++S S+ + NLA E+++FR + +N E +L+++N VV+G++QNPW E +
Sbjct: 12 VLKSTSSCIFENLAYEEHIFRTHNVAQN---GEILLMWSNRPAVVIGRHQNPWIEVNIPY 68
Query: 168 IASRGYNFVRRRSGGGAVVHDLGNVNYSYLTSRESFRR----EFFNQQLVQWLSNENITL 223
VRR SGGG V HDLGN+N S LT+ R +F + L Q S I
Sbjct: 69 ANKNNIQIVRRHSGGGTVYHDLGNLNISLLTTHAQHCRPKNLKFISDALNQQFS-VKIVP 127
Query: 224 NDRGDL-IYKG-YKISGSAFKIAKGKAYHHGTMLIDSDLAQFKGLLKPDVIPGVEWTCNS 281
N R D+ ++ G K SG+A +IA+G+AYHH T+L+ +DL LK +E N+
Sbjct: 128 NKRDDMELHPGERKCSGTAARIARGQAYHHLTLLVGADLQVLSKSLKSPWRDKIE--SNA 185
Query: 282 VESVRSKVDNI--GGKAISSIDDFCNLITDQFRNLVDDSEI-PMFYCDXXXXXXXXXXXX 338
SVR+ A ++++ I + +R L ++S I + +
Sbjct: 186 TRSVRAPAVGFLKQDDANANVEQSKLAIVEAYRKLFEESHIKTVNVAEEVKKNAEISKIF 245
Query: 339 XNLRSKEWKFMSGPRFE 355
L++ +W + P+F+
Sbjct: 246 DELKAWKWIYGKSPKFQ 262
>Hs7706252 [H] KOG3159 Lipoate-protein ligase A
Length = 373
Score = 107 bits (266), Expect = 4e-23
Identities = 64/190 (33%), Positives = 104/190 (54%), Gaps = 12/190 (6%)
Query: 108 VIRSVSTNPYFNLALEDYVFRNTPLTENKTGNERILLYTNDKCVVVGKNQNPWKETYMRN 167
+++S+S + Y NLA+ED++ + N G + + N VV+G++QNPW+E +
Sbjct: 33 ILQSISNDVYQNLAVEDWIHDHM----NLEGKPILFFWQNSPSVVIGRHQNPWQECNLNL 88
Query: 168 IASRGYNFVRRRSGGGAVVHDLGNVNYSYLTSRESFRREFFNQQLVQWLS----NENITL 223
+ G RRRSGGG V HD+GN+N ++ T+++ + R + +V+ L+ ++
Sbjct: 89 MREEGIKLARRRSGGGTVYHDMGNINLTFFTTKKKYDRMENLKLIVRALNAVQPQLDVQA 148
Query: 224 NDRGDLIYKG-YKISGSAFKIAKGKAYHHGTMLIDSDLAQFKGLLKPDVIPGVEWTCNSV 282
R DL+ G +KISG+A KI + AYHH T+L +D LLK P N+
Sbjct: 149 TKRFDLLLDGQFKISGTASKIGRTTAYHHCTLLCSTDGTFLSSLLKS---PYQGIRSNAT 205
Query: 283 ESVRSKVDNI 292
S+ S V N+
Sbjct: 206 ASIPSLVKNL 215
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.318 0.137 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,406,865
Number of Sequences: 60738
Number of extensions: 1066773
Number of successful extensions: 2899
Number of sequences better than 1.0e-05: 5
Number of HSP's better than 0.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2881
Number of HSP's gapped (non-prelim): 5
length of query: 401
length of database: 30,389,216
effective HSP length: 109
effective length of query: 292
effective length of database: 23,768,774
effective search space: 6940482008
effective search space used: 6940482008
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)