ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI0796 good R KOG1844 General function prediction only PHD Zn-finger proteins
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI0796 269162 271549 796
(796 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YKR029c [R] KOG1844 PHD Zn-finger proteins 494 e-139
YJL105w [R] KOG1844 PHD Zn-finger proteins 301 2e-81
SPAC22E12.11c [R] KOG1844 PHD Zn-finger proteins 113 1e-24
Hs20543055 [R] KOG1844 PHD Zn-finger proteins 80 2e-14
Hs8923726 [R] KOG1844 PHD Zn-finger proteins 75 3e-13
7299595_2 [R] KOG1844 PHD Zn-finger proteins 64 7e-10
SPBC1685.08 [R] KOG1844 PHD Zn-finger proteins 63 2e-09
SPCC645.13 [K] KOG1634 Predicted transcription factor DATF1 cont... 61 6e-09
YPL181w [R] KOG1844 PHD Zn-finger proteins 59 2e-08
Hs8922081 [K] KOG1083 Putative transcription factor ASH1/LIN-59 57 1e-07
CE25361 [R] KOG1844 PHD Zn-finger proteins 56 2e-07
Hs18034775_1 [R] KOG1844 PHD Zn-finger proteins 55 3e-07
CE16990 [R] KOG1844 PHD Zn-finger proteins 54 1e-06
At2g01810 [R] KOG1844 PHD Zn-finger proteins 52 3e-06
7304310_2 [B] KOG1973 Chromatin remodeling protein contains PHD ... 52 3e-06
7293772 [K] KOG1083 Putative transcription factor ASH1/LIN-59 52 4e-06
>YKR029c [R] KOG1844 PHD Zn-finger proteins
Length = 751
Score = 494 bits (1273), Expect = e-139
Identities = 297/703 (42%), Positives = 403/703 (57%), Gaps = 84/703 (11%)
Query: 159 AANNSVPMPRSGAEEKSPSKQAKSEDKVVEQEDSFKEAVEEQKLEKSETDRFSSVPESYV 218
A ++V +P A E+S ++ A S + KE E Q ++ + VP+SY+
Sbjct: 63 ATASTVSLPLKKATEQSAAEAATST--------AAKEETENQPQKQPQWP----VPDSYI 110
Query: 219 VDPDAGIITCICGYEDDDGFTIQCDHCFRWQHAICYGIEHEKDAPDDFLCNICNSRFVDV 278
VDPDAGIITCIC DDDGFTIQCDHC RWQHAICYGI+ APDD+LCN C+ R VD+
Sbjct: 111 VDPDAGIITCICDLNDDDGFTIQCDHCNRWQHAICYGIKDIGMAPDDYLCNSCDPREVDI 170
Query: 279 KLAKKKQQERIR-----------NAQNKK--RRRTANGNIKEV----KTKEATSGTKDSR 321
LA+K QQERI +A NK R R ++ I +V T + + +D R
Sbjct: 171 NLARKIQQERINVKTVEPSSSNNSASNKNNGRDRASSTTISDVGDSFSTDQDNTNHRDKR 230
Query: 322 ---NPGTSEATDHRIEPEAIPSADPLTNIV-----LINAKEAYPTVYLPLTSNDYKDKYV 373
NP ++ + D + E ++ S+D LT++ ++AK+AY +YLPL N +K +
Sbjct: 231 RKRNP-SNNSIDSKNESASVNSSDGLTSMPKKKEHFLSAKDAYGAIYLPLKDNVFKSDLI 289
Query: 374 ELFVKDHADDDWVIPYHKLTFKPIPIEIKPYSDSNHSRLFPGYPKLAVYLKQGCDEGDYI 433
E F+ H DD+WVI Y TFK + IE+KPY+D +SR +PG+ KL VYLK+ C +GD+I
Sbjct: 290 EPFLNKHMDDNWVIQYPHKTFKSVSIEVKPYADIAYSRTYPGFTKLGVYLKKDCIKGDFI 349
Query: 434 DEFLGEIDFQRKYLEDPRNNYRVWGTAKPKVIIHPHWPIYIDARLSGNLTRYLRRSCNPN 493
E LGE+DF + YL DPRN+YR+WGTAK +VI H HWPIYIDARLSGN TRYLRRSC PN
Sbjct: 350 QEILGELDFYKNYLTDPRNHYRIWGTAKRRVIFHSHWPIYIDARLSGNSTRYLRRSCQPN 409
Query: 494 VELVTIKLTNSNNQDE---------IKFVLRALRFIDKGEELHIKWDWDLRHPIWKLINH 544
VELVTIKL +++N+++ IKFVLRALR I + EEL+IKW WD +HPI KLI
Sbjct: 410 VELVTIKLQDTDNRNDKSSGRKSSRIKFVLRALRDISEDEELYIKWQWDSKHPILKLIK- 468
Query: 545 NESIDSIEEPQRYLFIHSIDTILGSCDCACGSNSKDCYLLKIKRHSQSLYRSVKS--KMN 602
+IDS+++ +RY I+S++TIL + +C CG+NSKDCYLLK+KR++QSLY+SVKS KMN
Sbjct: 469 GMTIDSLDDLERYGLINSVETILSNGECGCGNNSKDCYLLKVKRYAQSLYKSVKSRGKMN 528
Query: 603 NRYKLNEILHGNKLQTKKQSSILSKLAHATISDAARANEFLLKFNAVKLKMLEPVSDTVQ 662
NRYKLNEIL+ + +++ IL +L + RA L F K Q
Sbjct: 529 NRYKLNEILNQYNCKKRREPPILHRLEEKAQNTIERAPILLNNFYRQKFLNRNNGPKIPQ 588
Query: 663 KKSFHT--NAGSI-RGNKYRVSVTESKNRVDPLKESLS----FISDPSKFDESQIKHPAD 715
K + + N I + K+ + S N P K S I+ + +DES I + +
Sbjct: 589 KNTIDSTNNPDDIAKPFKFALFAQHSSNISVPKKNETSEKPLIITKSTDYDESHITNIEE 648
Query: 716 LPIPIQTISXXXXXXXXXXXXXXXXXISNQGQTSVTSDSNSIKNSLKRGIDSVPG----- 770
LPIP+ + N+ + S T ++ L +
Sbjct: 649 LPIPV--LLPINKTSRQTANDVEESQSKNEHKLSRTPSLSNFNKELSKEAQHSQAKTKEI 706
Query: 771 -------------PSSTIH-------QAQMKKKLSFADYKKKI 793
P S +H Q KKKLSFADY+KK+
Sbjct: 707 MTEASVNSRRESTPESIMHLSDFSSSQLHSKKKLSFADYRKKL 749
>YJL105w [R] KOG1844 PHD Zn-finger proteins
Length = 560
Score = 301 bits (772), Expect = 2e-81
Identities = 187/557 (33%), Positives = 276/557 (48%), Gaps = 89/557 (15%)
Query: 82 NPMTSPGPASVALIKXXXXXXHLKGSPVDNGI--HRSNSNSEKTKKSGNKKGMVXXXXXX 139
N M + GP + L + D GI H S+S S KT S NK+G+
Sbjct: 69 NTMPTAGPTPLHLFQN------------DRGIFNHHSSSGSSKTA-STNKRGIAAAVALA 115
Query: 140 XXXTMPLPLKRKAENDRKPAANNSVPMPRSGAEEK-SPSKQAKSEDKVVEQEDSFKEAVE 198
T+P PLK++ ++D SV S E K +PS +A E
Sbjct: 116 TAATIPFPLKKQNQDDNSKV---SVTHNESSKENKITPSMRA-----------------E 155
Query: 199 EQKLEKSETDRFSSVPESYVVDPDAGIITCICGYEDD-DGFTIQCDHCFRWQHAICYGIE 257
+ K P G CICG D D IQC+ C WQH +CY +
Sbjct: 156 DNK-------------------PKNG---CICGSSDSKDELFIQCNKCKTWQHKLCYAFK 193
Query: 258 HEKDAPDDFLCNICNSRF-VDVKLAK------KKQQERI--------RNAQNKKRRRTAN 302
DF+C C+S V V K K ER+ +A N + + +
Sbjct: 194 KSDPIKRDFVCKRCDSDTKVQVNQVKPMIFPRKMGDERLFQFSSIVTTSASNTNQHQQSV 253
Query: 303 GNIKEVKTKEATSGTKDSRNPGTSEATDHRIEPEAIPSADPLTNIVLINAKEAYPTVYLP 362
NI+E K T + S + ++ E + + +L + T +
Sbjct: 254 NNIEEQPKKRQLHYTAPTTE--NSNSIRKKLRQEKLVVSSHFLKPLLNEVSSSNDTEFKA 311
Query: 363 LTSNDYKDKYVELFVKDHADDDWVIPYHKLTFKPIPIEIKPYSDSNHSRLFPGYPKLAVY 422
+T ++YKDKYV++F+ +H DDDWV+ + + + IE++ S+ V+
Sbjct: 312 ITISEYKDKYVKMFIDNHYDDDWVVCSNWESSRSADIEVRKSSNERD---------FGVF 362
Query: 423 LKQGCDEGDYIDEFLGEIDFQRKYLEDPRNNYRVWGTAKPKVIIHPHWPIYIDARLSGNL 482
C +G+ I E+LG+IDFQ+ Y DP N+YR+ GT KPKV+ HPHWP+YID+R +G L
Sbjct: 363 AADSCVKGELIQEYLGKIDFQKNYQTDPNNDYRLMGTTKPKVLFHPHWPLYIDSRETGGL 422
Query: 483 TRYLRRSCNPNVELVTIK----LTNSNNQDEIKFVLRALRFIDKGEELHIKWDWDLRHPI 538
TRY+RRSC PNVELVT++ +N +KFVLRA+R I KGEE+ ++W WDLR+PI
Sbjct: 423 TRYIRRSCEPNVELVTVRPLDEKPRGDNDCRVKFVLRAIRDIRKGEEISVEWQWDLRNPI 482
Query: 539 WKLINHNESIDSIEEPQRYLFIHSIDTILGSCDCACGSNSKDCYLLKIKRHSQSLYRSVK 598
W++IN ++ +DS+ +P ++ + SI TIL +CDCACG +C + KIK S+ R+ K
Sbjct: 483 WEIINASKDLDSLPDPDKFWLMGSIKTILTNCDCACGYLGHNCPITKIKNFSEEFMRNTK 542
Query: 599 SKMNNRYKLNEILHGNK 615
++N+ N I+H K
Sbjct: 543 ESLSNKSYFNTIMHNCK 559
>SPAC22E12.11c [R] KOG1844 PHD Zn-finger proteins
Length = 859
Score = 113 bits (283), Expect = 1e-24
Identities = 96/410 (23%), Positives = 174/410 (42%), Gaps = 52/410 (12%)
Query: 226 ITCICGYEDDDGFTIQCDHCFRWQHAICYGIEHEKDAPDDFLCNICNSRFVD-------- 277
I C+C +EDDDGFTIQC+ C WQHA+C I+ + P+ + C C R +D
Sbjct: 4 IRCVCPFEDDDGFTIQCESCEVWQHAVCVNID-ANNVPEKYFCEQCQPRPIDADKAHKIQ 62
Query: 278 -VKLAKKKQQERI--RNAQNKKRRRTANGNIKEVKTKEAT---------SGTKDSRNPGT 325
+L ++++Q RI R+ + +RRT+ G T A+ +G S++ +
Sbjct: 63 LARLQREEEQSRILSRSRSSNNKRRTSFGKNGASPTHSASPRQGNNTGANGALFSQSTNS 122
Query: 326 SEATDHR--IEPEAIPSAD-PLTNIVLINAKEAYPTVYLPLTSNDYKDKYVELFVKDHAD 382
S + +R + +P+A P + + P+T + ++YV F ++
Sbjct: 123 SNSGSYRNSVTGATLPNAHAPHSQNRRRRSNHLNNPPEAPIT--EASNEYVYSFHLEY-- 178
Query: 383 DDWVIPYHKLTFKPIPIEIKPYSD----SNHSRLFPGYPKLAVYLKQGC----------- 427
+P TF +E D L G + + + C
Sbjct: 179 ----VPLESNTFSASALEYSKNLDLKNLDESEVLMDGCQVVPISSSKFCCSRFGLVSTCE 234
Query: 428 -DEGDYIDEFLGEIDFQRKYLEDPRNNYRVWGTAKPKVIIHPHWPIYIDARLSGNLTRYL 486
I E G + Q +Y DP+N Y + G KP V + + +D+R++G+ R+
Sbjct: 235 IPPNTPIMEVKGRVCTQNEYKSDPKNQYNILGAPKPHVFFDSNSQLVVDSRVAGSKARFA 294
Query: 487 RRSCNPNVELVTIKLTNSNNQDEIKFVLRALRFIDKGEELHIKWDWDLRHPIWKLINHNE 546
R+ C N + ++ + SN+ +F+L + I E+ W D+ HP ++
Sbjct: 295 RKGCQSNSVVSSVYMNGSNSVP--RFILYSTTHIAPETEIIGDWTLDISHP-FRQFAPGM 351
Query: 547 SIDSIEEPQRYLFIHSIDTILGSCDCACGSNSKDCYLLKIKRHSQSLYRS 596
S S + L + T L +CA + K+C ++ ++ ++ R+
Sbjct: 352 SRPSFNMEELELLSEVLSTFLSFNECA-SQDKKNCVFSRVTKYIKAARRA 400
>Hs20543055 [R] KOG1844 PHD Zn-finger proteins
Length = 609
Score = 79.7 bits (195), Expect = 2e-14
Identities = 102/447 (22%), Positives = 170/447 (37%), Gaps = 101/447 (22%)
Query: 206 ETDRFSSVPESYVVDPDAGIITCICGYEDDDGFTIQCDHCFRWQHAICYGIEHEKDAPDD 265
ET +++ S + CICG+ DDG+ I CD C WQH C GI+ + PD
Sbjct: 99 ETSSATTISTSEDGSYGTDVTRCICGFTHDDGYMICCDKCSVWQHIDCMGIDRQ-HIPDT 157
Query: 266 FLCNICNSRFVDVKLAKKKQQERIRNAQNKKRRRTANGNIKEVK--------------TK 311
+LC C R +D + A Q+ + N + T +G+ V+ T
Sbjct: 158 YLCERCQPRNLDKERAVLLQRRKRENMSDGDTSATESGDEVPVELYTAFQHTPTSITLTA 217
Query: 312 EATSGTKDSRNPGTSEATDH----------------RIE---PEAIPSADPLTNIVLINA 352
S D R + E H R++ PE PS+D +N
Sbjct: 218 SRVSKVNDKRRKKSGEKEQHISKCKKAFREGSRKSSRVKGSAPEIDPSSDG-SNFGWETK 276
Query: 353 KEAYPTVYLPLTSNDYKD------KYVELFVKDHADDDWV----IPYHKLTFKPIPIEIK 402
+A+ Y +N Y + + + L + + D + + + L FKP P+E
Sbjct: 277 IKAWMDRYEEANNNQYSEGVQREAQRIALRLGNGNDKKEMNKSDLNTNNLLFKP-PVESH 335
Query: 403 PYSDSNHSRLFPGYPKLAVYLKQGCDEGDYIDEFLGEIDFQRKYLEDPRNNYRVWGTAKP 462
+ + P A+ + +Y +F+ F+ N Y + P
Sbjct: 336 IQKNKKILKSAKDLPPDALII-------EYRGKFMLREQFE-------ANGY-FFKRPYP 380
Query: 463 KVIIHPHW---PIYIDARLSGNLTRYLRRSCNPNVELVTIKLTNSNNQDEIKFVLRALRF 519
V+ + + + +DAR GN R++RRSC PN E + + I + ++
Sbjct: 381 FVLFYSKFHGLEMCVDARTFGNEARFIRRSCTPNAE-----VRHEIQDGTIHLYIYSIHS 435
Query: 520 IDKGEELHIKWDWDLRHPIWKLINHNESIDSIEEPQRYLFIHSIDTILGSCDCACGSNSK 579
I KG E+ I +D+D + +K+ DCAC +
Sbjct: 436 IPKGTEITIAFDFDYGNCKYKV-----------------------------DCACLKENP 466
Query: 580 DCYLLKIKRHSQSLYRSVKSKMNNRYK 606
+C +L KR S+S+ ++ S R K
Sbjct: 467 ECPVL--KRSSESM-ENINSGYETRRK 490
>Hs8923726 [R] KOG1844 PHD Zn-finger proteins
Length = 453
Score = 75.5 bits (184), Expect = 3e-13
Identities = 100/457 (21%), Positives = 167/457 (35%), Gaps = 98/457 (21%)
Query: 206 ETDRFSSVPESYVVDPDAGIITCICGYEDDDGFTIQCDHCFRWQHAICYGIEHEKDAPDD 265
ET +++ S + CICG+ DDG+ I CD C WQH C GI+ + PD
Sbjct: 33 ETSSATTISTSEDGSYGTDVTRCICGFTHDDGYMICCDKCSVWQHIDCMGIDRQ-HIPDT 91
Query: 266 FLCNICNSRFVDVKLAKKKQQERIRNAQNKKRRRTANGNIKEVK--------------TK 311
+LC C R +D + A Q+ + N + T +G+ V+ T
Sbjct: 92 YLCERCQPRNLDKERAVLLQRRKRENMSDGDTSATESGDEVPVELYTAFQHTPTSITLTA 151
Query: 312 EATSGTKDSRNPGTSEATDH----------------RIE---PEAIPSADPLTNIVLINA 352
S D R + E H R++ PE PS+D +N
Sbjct: 152 SRVSKVNDKRRKKSGEKEQHISKCKKAFREGSRKSSRVKGSAPEIDPSSDG-SNFGWETK 210
Query: 353 KEAYPTVYLPLTSNDYKD------KYVELFVKDHADDDWV----IPYHKLTFKPIPIEIK 402
+A+ Y +N Y + + + L + + D + + + L FKP P+E
Sbjct: 211 IKAWMDRYEEANNNQYSEGVQREAQRIALRLGNGNDKKEMNKSDLNTNNLLFKP-PVESH 269
Query: 403 PYSDSNHSRLFPGYPKLAVYLKQGCDEGDYIDEFLGEIDFQRKYLEDPRNNYRVWGTAKP 462
+ + P A+ + +Y +F+ F+ N Y + P
Sbjct: 270 IQKNKKILKSAKDLPPDALII-------EYRGKFMLREQFE-------ANGY-FFKRPYP 314
Query: 463 KVIIHPHW---PIYIDARLSGNLTRYLRRSCNPNVELVTIKLTNSNNQDEIKFVLRALRF 519
V+ + + + +DAR GN R++RRS PN E + + I + ++
Sbjct: 315 FVLFYSKFHGLEMCVDARTFGNEARFIRRSRTPNAE-----VRHEIQDGTIHLYIYSIHS 369
Query: 520 IDKGEELHIKWDWDLRHPIWKLINHNESIDSIEEPQRYLFIHSIDTILGSCDCACGSNSK 579
I KG E+ I +D+D + +K+ DCAC +
Sbjct: 370 IPKGTEITIAFDFDYGNCKYKV-----------------------------DCACLKENP 400
Query: 580 DCYLLKIKRHSQSLYRSVKSKMNNRYKLNEILHGNKL 616
+C +LK S S + K +I K+
Sbjct: 401 ECPVLKRSSESMENINSGYETRRKKGKKTKIFQKKKI 437
>7299595_2 [R] KOG1844 PHD Zn-finger proteins
Length = 254
Score = 64.3 bits (155), Expect = 7e-10
Identities = 25/49 (51%), Positives = 31/49 (63%)
Query: 225 IITCICGYEDDDGFTIQCDHCFRWQHAICYGIEHEKDAPDDFLCNICNS 273
II CIC Y ++DG IQC+ C WQH C GI E D PD ++C IC +
Sbjct: 2 IINCICEYGEEDGLMIQCELCLCWQHGACNGIVKEADVPDKYVCYICRN 50
>SPBC1685.08 [R] KOG1844 PHD Zn-finger proteins
Length = 424
Score = 63.2 bits (152), Expect = 2e-09
Identities = 44/149 (29%), Positives = 63/149 (41%), Gaps = 25/149 (16%)
Query: 198 EEQKLEKSETDRFSSVPESYVVDPDAG-------IITCICGYEDDD------GFTIQCDH 244
E +K++KS D P V D + + C+CG + D G IQCD
Sbjct: 15 ESEKIQKSPVDT-PHTPNGSVSDNEENETSSTGEVTRCVCGIVESDDEASDGGLYIQCDQ 73
Query: 245 CFRWQHAICYGIEHEKDAPDDFLCNICNSRFVDVKLAKKKQQERIRNAQNKKRRRTANGN 304
C WQH C G E + P+ + C IC+ F K +R R A K+ + NG
Sbjct: 74 CSVWQHGNCVGFADESEVPEVYYCEICHPEF-------HKVYQRGRGA--KQSKYLGNGK 124
Query: 305 IKEVKTKEATSGTKDSRNPGTSEATDHRI 333
E E +S T S P T +++ R+
Sbjct: 125 PIEASQTEESSSTPPS--PATKKSSKQRL 151
>SPCC645.13 [K] KOG1634 Predicted transcription factor DATF1 contains PHD and
TFS2M domains
Length = 721
Score = 61.2 bits (147), Expect = 6e-09
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 14/119 (11%)
Query: 221 PDAGIITCICGYEDDDGFT-IQCDHCFRWQHAICYGIEHEKDAPDDFLCNICNSR---FV 276
P ++ C+C ++D G T +QCD C WQHA C G+ +KD P+ + C +C+SR
Sbjct: 16 PPETVVRCVCKSQEDIGDTWVQCDGCDCWQHASCVGLA-DKDIPESYYCEVCHSRSDVSS 74
Query: 277 DVKLAKKKQQERIR---------NAQNKKRRRTANGNIKEVKTKEATSGTKDSRNPGTS 326
V+ + K +E N +N + + + KE TKE+ + + S T+
Sbjct: 75 QVQNSPNKDEEHQTADLLASNEGNEKNNEENNVVSSDSKEAITKESGAELESSEPASTN 133
>YPL181w [R] KOG1844 PHD Zn-finger proteins
Length = 506
Score = 59.3 bits (142), Expect = 2e-08
Identities = 54/207 (26%), Positives = 79/207 (38%), Gaps = 32/207 (15%)
Query: 189 QEDSFKEAVEEQKLEKSETDRFSSVPESYVVDPDAGIITCICGY---EDDDGFTIQCDHC 245
QE+S K+ E+ +E E + V+ + G CICG DD GF IQC+ C
Sbjct: 48 QEESVKQ--EDVPMEGGEGE----------VEEEEGETRCICGELDTPDDSGFFIQCEQC 95
Query: 246 FRWQHAICYGIEHEKDAPDDFLCNICNSRF--------VDVKLAKKKQQERIRNAQNKKR 297
WQH C I + +APD + C C + + K QE+ R ++ K R
Sbjct: 96 SSWQHGYCVSITQD-NAPDKYWCEQCRPELHQLFTTDTGEARSIYKPVQEKRRQSRRKAR 154
Query: 298 RRTANGNIKEVKTKEATSGTKDSRNPGTSEATDHRIEPEAIPSADPLTNIVLINAKEAYP 357
A+ K+ A K RN ++ I E D + + L AK+
Sbjct: 155 SAAAS------KSHAANEAEKSPRNTSNTDDNVDDIGDEEDEVEDEASAVAL--AKDGNT 206
Query: 358 TVYLPLTSNDYKDKYVELFVKDHADDD 384
N D + + D D D
Sbjct: 207 RSSRRRRRNSMDDASTDQYSLDPGDSD 233
>Hs8922081 [K] KOG1083 Putative transcription factor ASH1/LIN-59
Length = 2969
Score = 56.6 bits (135), Expect = 1e-07
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 220 DPDAGIITCICGYEDDDGFTIQCDHCFRWQHAICYGIEHEKDAPDDFLCNICNSRFVD 277
+ D +I CICG +D+G IQCD C WQH C G+ + + +LC C+ R VD
Sbjct: 2580 EKDDDVIRCICGLYNDEGLMIQCDKCMVWQHCDCMGVNSD---VEHYLCEQCDPRPVD 2634
>CE25361 [R] KOG1844 PHD Zn-finger proteins
Length = 1645
Score = 56.2 bits (134), Expect = 2e-07
Identities = 72/315 (22%), Positives = 129/315 (40%), Gaps = 50/315 (15%)
Query: 228 CICGYEDDDGFTIQCDHCFRWQHAICYGIEHEKDAPDDFLCNICNSRFVDVKLAK-KKQQ 286
C CG + DG TI+C+ C WQH C G+ K + C +C R + V A+ ++Q
Sbjct: 797 CHCGMDHGDGDTIECEGCKTWQHMACMGLT-LKSNTSKYKCEMCLPRRLPVSKAEAAREQ 855
Query: 287 ERIRN---AQNKKRRRTANGNIKEVKTKEATSGTKDSRNPGTSEATDHRIEPEAIPSAD- 342
ERI N A KK++R + ++ K++ +T SR EP D
Sbjct: 856 ERILNRLRAAAKKQKRKSEPVEQKQKSQPST-----SRKSAPMALQQQPAEPRVAQLNDY 910
Query: 343 -PLTNIVLINAKEAYPTVYLPLTSNDYKDKYVELFVKDHADDDWVIPYHKLTFKPIPIEI 401
+ +L ++ L S +K K +FV++ + ++ + + + +E+
Sbjct: 911 SKQASALLFGMEQTAGADTLLAESRLHK-KARRMFVEEAVEA--LVTTDLVQIRQVILEV 967
Query: 402 KPY-SDSNHSRLFPGYPKLAVYLKQGCDEGDYIDEFLGEIDFQRKYLEDPRNNYRVWGTA 460
+ S SN + PG +++ G +G ++ G
Sbjct: 968 NGHVSMSNEVKRQPGGGN-CIFMYDGLMKGTAGEDM---------------------GDG 1005
Query: 461 KPKVIIHPHWPIYIDARLSGNLTRYLRRSCNPNVELVTIKLTNSNNQDEIKFVLRALRFI 520
+ V I D + GN T++ RRSC PN L + +N+ + ++ A + I
Sbjct: 1006 QELVCI--------DTKRKGNDTKFTRRSCVPNCVLKHVLGSNAT----LGIMIVATKDI 1053
Query: 521 DKGEELHIKWDWDLR 535
+ E+ + +D D R
Sbjct: 1054 TRNTEVTLPFDADWR 1068
>Hs18034775_1 [R] KOG1844 PHD Zn-finger proteins
Length = 830
Score = 55.5 bits (132), Expect = 3e-07
Identities = 26/93 (27%), Positives = 46/93 (48%), Gaps = 17/93 (18%)
Query: 195 EAVEEQKLEKSETDRFSSVPESYVVDPDAG----------------IITCICGYEDDDGF 238
+A+EE L +S ++ F + Y D D ++ CIC ++++ F
Sbjct: 606 KALEEDNLSESSSESFLWSDDEYGQDVDVTTNPDEELDGDDRYDFEVVRCICEVQEENDF 665
Query: 239 TIQCDHCFRWQHAICYGIEHEKDAPDDFLCNIC 271
IQC+ C WQH +C G+ E++ P+ + C +C
Sbjct: 666 MIQCEECQCWQHGVCMGL-LEENVPEKYTCYVC 697
>CE16990 [R] KOG1844 PHD Zn-finger proteins
Length = 1655
Score = 53.5 bits (127), Expect = 1e-06
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 228 CICGYEDDDGFTIQCDHCFRWQHAICYGIEHEKDAPDDFLCNICNSRFVDVKLAK-KKQQ 286
C CG + DG TI+C+ C WQH C G+ K + C +C R + V A+ ++Q
Sbjct: 821 CHCGMDHGDGDTIECEGCKTWQHMACMGLT-LKSNTSKYKCEMCLPRRLPVSKAEAAREQ 879
Query: 287 ERIRN----AQNKKRRRTANGNIKEVKTKEATS 315
ERI N A K++R++ K+ ++ +TS
Sbjct: 880 ERILNRLRAAARKQKRKSEPVEQKQKSSQPSTS 912
>At2g01810 [R] KOG1844 PHD Zn-finger proteins
Length = 697
Score = 52.4 bits (124), Expect = 3e-06
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 222 DAGIITCICGYEDDDGFT-IQCDHCFRWQHAICYGIEHEKDAPDDFLCNIC 271
D + C CG DDDG + CD C W H +C IE ++ P FLCN+C
Sbjct: 632 DDWTVDCKCGARDDDGERMVACDACKVWHHTLCNSIEDDEAVPSVFLCNMC 682
>7304310_2 [B] KOG1973 Chromatin remodeling protein contains PHD Zn-finger
Length = 1274
Score = 52.4 bits (124), Expect = 3e-06
Identities = 47/187 (25%), Positives = 64/187 (34%), Gaps = 29/187 (15%)
Query: 113 IHRSNSNSEKTKKSGNKKGMVXXXXXXXXXTMPLPLKRKAENDRKPAANNSVPMPRSGAE 172
+ +++SNS + N +P L NN VP +
Sbjct: 1112 VSQTSSNSAGWLSNPNNSNTASSTLSASSVLLPQQLMLAPHT----IMNNFVPAMCNSTG 1167
Query: 173 EKSPSKQAKSEDKVVEQEDSFKEAVEEQKLEKSETDRFSSVPESYVVDPDAGIITC-ICG 231
S S S E+ + + E SS P SYV I C CG
Sbjct: 1168 TVSKSGLCSSPPNTSEENANAMQIAE------------SSRPSSYVDAEGNRIWICPACG 1215
Query: 232 YEDDDGFTIQCDHCFRWQHAICYGIEHEKDAPDDFLCNICNSRFVDVKLAKKKQQERIRN 291
DD I CD C W H IC GI DD+ C +C ++ +RI
Sbjct: 1216 KVDDGSAMIGCDGCDAWYHWICVGITFAPKDNDDWFCRVCVTK------------KRIHG 1263
Query: 292 AQNKKRR 298
++ KKRR
Sbjct: 1264 SEKKKRR 1270
>7293772 [K] KOG1083 Putative transcription factor ASH1/LIN-59
Length = 2167
Score = 52.0 bits (123), Expect = 4e-06
Identities = 25/57 (43%), Positives = 31/57 (53%), Gaps = 3/57 (5%)
Query: 221 PDAGIITCICGYEDDDGFTIQCDHCFRWQHAICYGIEHEKDAPDDFLCNICNSRFVD 277
PD +I CICG D+G IQC C WQH C + + DA D++ C C R VD
Sbjct: 1794 PDEDVIRCICGLYKDEGLMIQCSKCMVWQHTEC--TKADIDA-DNYQCERCEPREVD 1847
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.313 0.131 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,051,103
Number of Sequences: 60738
Number of extensions: 2179543
Number of successful extensions: 7958
Number of sequences better than 1.0e-05: 16
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 7921
Number of HSP's gapped (non-prelim): 36
length of query: 796
length of database: 30,389,216
effective HSP length: 114
effective length of query: 682
effective length of database: 23,465,084
effective search space: 16003187288
effective search space used: 16003187288
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)