ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI0841 suspect: LH OT KOG4041 Posttranslational modification, protein turnover, chaperones Protein phosphatase 1, regulatory (inhibitor) subunit PPP1R2 r_klactVI0841 suspect: LH OT KOG4041 Signal transduction mechanisms Protein phosphatase 1, regulatory (inhibitor) subunit PPP1R2
Only best alignment is shown:

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactVI0841  287169 286588 -194 
         (194 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Hs5453946 [OT] KOG4041 Protein phosphatase 1 regulatory (inhibit...    49   3e-06

>Hs5453946 [OT] KOG4041 Protein phosphatase 1 regulatory (inhibitor) subunit
           PPP1R2
          Length = 205

 Score = 49.3 bits (116), Expect = 3e-06
 Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 26/146 (17%)

Query: 63  EQDPESLKWNKKN-LEENEITKQEFGDIHIDEPKTPYQGAVDPNGEYYKIDDDDEDLGGF 121
           E   +S KW++ N L       +++G + IDEP TPY   +  + +     +  E +   
Sbjct: 39  ELSKKSQKWDEMNILATYHPADKDYGLMKIDEPSTPYHSMMGDDEDACSDTEATEAMAPD 98

Query: 122 SLG---------EPQVDLKEDKEPVTLLNNEDPQVSPPVLETEEDEAAKKHRKFEEMRKK 172
            L          EP+  ++E +        ED  +SP        E  +K R+FE  RK 
Sbjct: 99  ILARKLAAAEGLEPKYRIQEQESS----GEEDSDLSP--------EEREKKRQFEMKRKL 146

Query: 173 HYNVKADLQNAKQ----NLPDDDDDE 194
           HYN   +++ A+Q    +L DDD+DE
Sbjct: 147 HYNEGLNIKLARQLISKDLHDDDEDE 172


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.305    0.130    0.363 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,975,754
Number of Sequences: 60738
Number of extensions: 691351
Number of successful extensions: 2160
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2158
Number of HSP's gapped (non-prelim): 1
length of query: 194
length of database: 30,389,216
effective HSP length: 101
effective length of query: 93
effective length of database: 24,254,678
effective search space: 2255685054
effective search space used: 2255685054
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)