ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI0961 check: MH YU KOG3630 Intracellular trafficking, secretion, and vesicular transport Nuclear pore complex, Nup214/CAN component
r_klactVI0961 check: MH YU KOG3630 Nuclear structure Nuclear pore complex, Nup214/CAN component
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI0961 333227 328833 -1465
(1465 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YIL115c [YU] KOG3630 Nuclear pore complex Nup214/CAN component 335 4e-91
YDR192c [YU] KOG0845 Nuclear pore complex Nup98 component (sc Nu... 118 8e-26
At1g10390 [YU] KOG0845 Nuclear pore complex Nup98 component (sc ... 115 7e-25
At1g59660 [YU] KOG0845 Nuclear pore complex Nup98 component (sc ... 95 9e-19
7300534 [YU] KOG0845 Nuclear pore complex Nup98 component (sc Nu... 87 3e-16
SPAC23D3.06c [YU] KOG3630 Nuclear pore complex Nup214/CAN component 85 1e-15
7303453 [YU] KOG3091 Nuclear pore complex p54 component (sc Nup57) 83 3e-15
7301054 [YU] KOG0845 Nuclear pore complex Nup98 component (sc Nu... 77 2e-13
Hs4826874 [YU] KOG3630 Nuclear pore complex Nup214/CAN component 77 3e-13
At3g10650 [YU] KOG0845 Nuclear pore complex Nup98 component (sc ... 76 5e-13
7293246 [YU] KOG4719 Nuclear pore complex protein 76 5e-13
7299479 [R] KOG1721 FOG: Zn-finger 75 1e-12
7291503 [YU] KOG3630 Nuclear pore complex Nup214/CAN component 71 1e-11
SPAC26A3.15c [Y] KOG2196 Nuclear porin 70 2e-11
SPAC1486.05 [YU] KOG0845 Nuclear pore complex Nup98 component (s... 70 2e-11
CE05198 [YU] KOG3630 Nuclear pore complex Nup214/CAN component 68 1e-10
CE28184 [YU] KOG0845 Nuclear pore complex Nup98 component (sc Nu... 65 6e-10
CE28183 [YU] KOG0845 Nuclear pore complex Nup98 component (sc Nu... 65 6e-10
YJL041w_1 [YU] KOG4719 Nuclear pore complex protein 65 1e-09
YKL068w [YU] KOG0845 Nuclear pore complex Nup98 component (sc Nu... 64 1e-09
7294642 [W] KOG3544 Collagens (type IV and type XIII) and relate... 60 3e-08
Hs4885225 [R] KOG1995 Conserved Zn-finger protein 59 6e-08
CE13738 [YU] KOG0845 Nuclear pore complex Nup98 component (sc Nu... 59 6e-08
Hs4826872 [YU] KOG4719 Nuclear pore complex protein 58 1e-07
Hs19923345 [R] KOG4307 RNA binding protein RBM12/SWAN 58 1e-07
CE29052 [A] KOG0335 ATP-dependent RNA helicase 58 1e-07
CE04240 [W] KOG3544 Collagens (type IV and type XIII) and relate... 58 1e-07
CE10988_1 [YU] KOG0845 Nuclear pore complex Nup98 component (sc ... 57 2e-07
Hs7669490 [R] KOG1995 Conserved Zn-finger protein 56 4e-07
YGR119c [YU] KOG3091 Nuclear pore complex p54 component (sc Nup57) 54 2e-06
SPAC22G7.09c [YU] KOG0845 Nuclear pore complex Nup98 component (... 54 2e-06
CE23858 [YU] KOG3091 Nuclear pore complex p54 component (sc Nup57) 54 2e-06
YOR098c [YU] KOG4719 Nuclear pore complex protein 53 3e-06
YLR335w_1 [YU] KOG4719 Nuclear pore complex protein 53 3e-06
ECU02g0460 [YU] KOG0845 Nuclear pore complex Nup98 component (sc... 53 4e-06
CE17939 [U] KOG0864 Ran-binding protein RANBP1 and related RanBD... 53 4e-06
YKR092c [Y] KOG2992 Nucleolar GTPase/ATPase p130 52 5e-06
Hs19923191 [UD] KOG1860 Nuclear protein export factor 52 7e-06
SPBC1711.05 [Y] KOG2992 Nucleolar GTPase/ATPase p130 52 9e-06
CE29051 [A] KOG0335 ATP-dependent RNA helicase 52 9e-06
>YIL115c [YU] KOG3630 Nuclear pore complex Nup214/CAN component
Length = 1460
Score = 335 bits (858), Expect = 4e-91
Identities = 266/849 (31%), Positives = 411/849 (48%), Gaps = 91/849 (10%)
Query: 3 SSVVDALNVETTESLGFKFLFSKQIVPGFNEDLPFSKLANASIHPLKKLLAVASSKTVSV 62
SS+ D + ET+E GFKFL KQI+P FNE LPF+ L N I K L AS V
Sbjct: 2 SSLKDEVPTETSEDFGFKFLGQKQILPSFNEKLPFASLQNLDISNSKSLFVAASGSKAVV 61
Query: 63 YDLQSVRDE--SFITLNTKEFTAKVVGVFFVAESLATVLEDGSVWVTELDQFAWEQYWDG 120
+LQ +RD S T T ++ ++ V FV VL + LD ++
Sbjct: 62 GELQLLRDHITSDSTPLTFKWEKEIPDVIFVCFHGDQVLVSTRNALYSLDLEELSEFRTV 121
Query: 121 NGVNEVICSVIFQGNVLLASNA-NVVFKISLSQKHSSEQLHSITGCIAIDTLKHQLYVLH 179
+ + + N L+ N+ N + + L K + + ++T + D QL VL
Sbjct: 122 TSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQLAQNVT---SFDVTNSQLAVLL 178
Query: 180 KNGSI-------AVLDEQFNVTSSIEKPSLD-EPNEPLSINALSESSLLVSYGEPVDASE 231
K+ S +++QF + E L E PLS+ LS L +G + ++
Sbjct: 179 KDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFGNVISETD 238
Query: 232 EDIMYDLTVYFVNV--NTKSFTPSMDIAPPYSTVKRNPSYYSQTLYQLAQQLPHLFVIGS 289
+++ YD +Y + + SF + DI PP+ + R P Y TL L + ++ V+ S
Sbjct: 239 DEVSYDQKMYIIKHIDGSASFQETFDITPPFGQIVRFPYMYKVTLSGLIEPDANVNVLAS 298
Query: 290 SCASELSIATPNVMYKPDQDAACAILPINPETDNDTQPIGMALDVFSSGTVYEPCSGVEA 349
SC+SE+SI + +P QD+ A+LPI+ ETD DT PIG+A+DV +SGT+ EPCSGV+
Sbjct: 299 SCSSEVSIWDSKQVIEPSQDSERAVLPISEETDKDTNPIGVAVDVVTSGTILEPCSGVDT 358
Query: 350 ADNLPILYVLTNLGELFCWALFHHSALQNSSFTLEPTKTQYVQSFEILSHKIESGSSSME 409
+ LP++Y+L N G L LFH +A+++ +++ ++ +S S KI E
Sbjct: 359 IERLPLVYILNNEGSLQIVGLFHVAAIKSGHYSINLESLEHEKSLSPTSEKIPIAGQEQE 418
Query: 410 KEKVTLISPQDTKNTITEVRKVPEQSSFFETTNSFAKGFSFTPKNMTDSTNAESEGSQNP 469
++K KN E K ++ F T++ GF+F + + +S+ S
Sbjct: 419 EKK---------KN--NESSKALSENPF---TSANTSGFTFLKTQPAAANSLQSQSS--- 461
Query: 470 LLSSGSSPAFGKPAFG------QATFGQVTSSQATPGQSAFGQPAFGLPTFGKPVSSQPT 523
S+ +P+FG AF +T V SS+ A +P FG P FG ++ +P+
Sbjct: 462 --STFGAPSFGSSAFKIDLPSVSSTSTGVASSEQDATDPASAKPVFGKPAFG-AIAKEPS 518
Query: 524 SGQSAFGQPAFGEPAFGKPASS--QPTSGQSAVGQPAFGQPAFGEPAFGKPASS-QPTSG 580
+ + AFG+P+FG P+FG SS P SG AFG+P+FG P+FG SS +P +
Sbjct: 519 TSEYAFGKPSFGAPSFGSGKSSVESPASGS------AFGKPSFGTPSFGSGNSSVEPPAS 572
Query: 581 QSAFGQAAFGPPTFG------KPASSQPTSGQPAFGQPAFGQPVSDQSAPSKPAFGKPTF 634
SAFG+ +FG P+FG +P +S G+P+FG AFG S+++ S FGK F
Sbjct: 573 GSAFGKPSFGTPSFGSGNSSAEPPASGSAFGKPSFGTSAFGTASSNET-NSGSIFGKAAF 631
Query: 635 GSTSFG-----------TQSQTNTTSPLSEEAETSSVFGTPSFGSTSFGIQGANVTS--- 680
GS+SF T S+ SP +E +++S F PS G S ++V S
Sbjct: 632 GSSSFAPANNELFGSNFTISKPTVDSP--KEVDSTSPF--PSSGDQSEDESKSDVDSSST 687
Query: 681 PFGTNTKISSESSFGKSLFGTSQFGSDSAVTNPAPNSFATSAKLSSPFSAFATDQKTINP 740
PFGT S++ FG+S FGS + + S T+ K + S F++ +P
Sbjct: 688 PFGTKPNTSTKPKTNAFDFGSSSFGSGFSKALESVGS-DTTFKFGTQASPFSSQLGNKSP 746
Query: 741 FETQTSDPFGHLNSKKEDTKSFNFTGFGESISEANHSLPSVTQDSLNSKEVSDSTIENDQ 800
F + T D + + K T N + E + P+V + +++DST+E
Sbjct: 747 FSSFTKDDTENGSLSKGSTSEIN-----DDNEEHESNGPNV-----SGNDLTDSTVEQTS 796
Query: 801 S----EVPS 805
S E PS
Sbjct: 797 STRLPETPS 805
Score = 133 bits (334), Expect = 2e-30
Identities = 161/618 (26%), Positives = 248/618 (40%), Gaps = 141/618 (22%)
Query: 545 SQPTSGQSAVGQPA--FGQPAFGEPAF--GKPASSQPTSGQSAFGQAAFGPPTFGKPASS 600
+QP + S Q + FG P+FG AF P+ S ++G ++ Q A +
Sbjct: 448 TQPAAANSLQSQSSSTFGAPSFGSSAFKIDLPSVSSTSTGVASSEQDA-----------T 496
Query: 601 QPTSGQPAFGQPAFGQPVSDQSAPSKPAFGKPTFGSTSFGTQSQTNTTSPLSEEAETSSV 660
P S +P FG+PAFG ++ + + S+ AFGKP+FG+ SFG+ +++ SP S S
Sbjct: 497 DPASAKPVFGKPAFGA-IAKEPSTSEYAFGKPSFGAPSFGS-GKSSVESPAS-----GSA 549
Query: 661 FGTPSFGSTSFGIQGANVTSPFGTNTKISSESSFGKSLFGTSQFGSDSAVTNPAPNSFAT 720
FG PSFG+ SFG ++V P +S S+FGK FGT FGS ++ P P S +
Sbjct: 550 FGKPSFGTPSFGSGNSSVEPP-------ASGSAFGKPSFGTPSFGSGNSSAEP-PASGSA 601
Query: 721 SAKLSSPFSAFATDQKTINPFETQTSDPFGHLNSKKEDTKS-FNFTGFGES-ISEANHSL 778
K S SA FG +S + ++ S F FG S + AN+ L
Sbjct: 602 FGKPSFGTSA------------------FGTASSNETNSGSIFGKAAFGSSSFAPANNEL 643
Query: 779 PSVTQDSLNSKEVSDSTIENDQSEVPSPANXXXXXXXXXXXXXNIVSSTDESDSLYGEDR 838
+ SK DS E D + P P SS D+S+
Sbjct: 644 --FGSNFTISKPTVDSPKEVDSTS-PFP------------------SSGDQSE------- 675
Query: 839 EIYDNDRSDIHIEASSKPSSTVLNSNSDIXXXXXXXXXXXXXKVETKDGQXXXXXXXXXX 898
D +SD+ ++SS P T N+++ K +T
Sbjct: 676 ---DESKSDV--DSSSTPFGTKPNTST---------------KPKTN-----AFDFGSSS 710
Query: 899 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQAQDEEQVKDDTKDVSKEK-------- 950
++ KDDT++ S K
Sbjct: 711 FGSGFSKALESVGSDTTFKFGTQASPFSSQLGNKSPFSSFTKDDTENGSLSKGSTSEIND 770
Query: 951 KQEEDKGNDKQVKGDLLTEGSFPSAESTT-PVAAS----YVTEEDDTRSSVASFTDRIKK 1005
EE + N V G+ LT+ + ST P S V EE+ +S + T+ IKK
Sbjct: 771 DNEEHESNGPNVSGNDLTDSTVEQTSSTRLPETPSDEDGEVVEEEAQKSPIGKLTETIKK 830
Query: 1006 AANLSTENIANPFMKSTAVENKDSSPFSGFTNSLSKDTGKAPAFSFAN--LKKDGSEITS 1063
+AN+ + NP V+ K SPFS F +++K + PAFSF N + K + S
Sbjct: 831 SANIDMAGLKNPVF-GNHVKAKSESPFSAFATNITKPSSTTPAFSFGNSTMNKSNTSTVS 889
Query: 1064 PLSNVNS--------ISNESVMREPEPELKQKTGD------EPDP--------EVATPST 1101
P+ ++ I+ +SV P +++TG+ DP E++ ++
Sbjct: 890 PMEEADTKETSEKGPITLKSVENPFLPAKEERTGESSKKDHNDDPKDGYVSGSEISVRTS 949
Query: 1102 NLASSEQKKEALSKDQEI 1119
A E + K Q++
Sbjct: 950 ESAFDTTANEEIPKSQDV 967
Score = 112 bits (281), Expect = 3e-24
Identities = 119/540 (22%), Positives = 222/540 (41%), Gaps = 39/540 (7%)
Query: 950 KKQEEDKGNDKQVKGDLLTEGSFPSAESTTPVAASYVTEEDDTRSSVASFTD-RIKKAAN 1008
KK D D V G ++ + SA TT A + + D + S TD + + A
Sbjct: 927 KKDHNDDPKDGYVSGSEISVRTSESAFDTT--ANEEIPKSQDVNNHEKSETDPKYSQHAV 984
Query: 1009 LSTENIANPFMKSTAVENKDSSPFSGFTN---SLSKDTGKAPAFSFANLKKDGSEITSPL 1065
+ +N + +++ + P G +L KD K S +K+
Sbjct: 985 VDHDNKSKEMNETSKNNERSGQPNHGVQGDGIALKKDNEKENFDSNMAIKQ--------F 1036
Query: 1066 SNVNSISNESVMREPEPELKQKTGDEPDPEVATPSTNLASSEQKKEALSKDQEIXXXXXX 1125
+ S ++ ++ + K D+ + +++ S K E ++ D+
Sbjct: 1037 EDHQSSEEDASEKDSRQSSEVKESDDNMSLNSDRDESISESYDKLEDINTDELPHGGEAF 1096
Query: 1126 XXXXXXXXXXXXXXXXXXXKMSKSSGTTTKEYVSQHVQA---SVPVGSASTQSLTKESAD 1182
++S T S+ + ++PV STQ++ KE+ D
Sbjct: 1097 KAREVSASADFDVQTSLEDNYAESGIQTDLSESSKENEVQTDAIPVKHNSTQTVKKEAVD 1156
Query: 1183 ------------FTLQAFENDEQYIAERYLPEMPSAFYSTAELKEFSTISSDEVVQAVEK 1230
F++Q FE DE Y+AE+ P+ +Y++A++ +S + ++ +E
Sbjct: 1157 NGLQTEPVETCNFSVQTFEGDENYLAEQCKPKQLKEYYTSAKVSNIPFVSQNSTLRLIES 1216
Query: 1231 TNAQVLANIQVLRSNIDNIGKFIGDHSQ-NLFKRTEKTVPIVSSWRLGEAATLLDILTS- 1288
T V A VL NI N+ F D S L KRT +++ + +WR+ EA LL+I +
Sbjct: 1217 TFQTVEAEFTVLMENIRNMDTFFTDQSSIPLVKRTVRSINNLYTWRIPEAEILLNIQNNI 1276
Query: 1289 KAKQSYELKQSYQRLADSSSAVTNFDML-----ITTLKRQYDILELSNRTSNHSNRKLSW 1343
K +Q + Q L + + D+ + K +Y L + S+ + LS
Sbjct: 1277 KCEQMQITNANIQDLKEKVTDYVRKDIAQITEDVANAKEEYLFLMHFDDASSGYVKDLST 1336
Query: 1344 SQHHISTMVKRKLEEVSSKLDEIRESIQVLKLYNLTNTKEALHAVQQLSLNGGIGRENLL 1403
Q + +++KL +VS+K++ E + +LKL+ + N + + + + R+ LL
Sbjct: 1337 HQFRMQKTLRQKLFDVSAKINHTEELLNILKLFTVKNKRLDDNPLVAKLAKESLARDGLL 1396
Query: 1404 TEIQSLREEISVLKL--SAEKPNQLEPENLLINXXXXXXXXXXXXXXXXXRAQLGDFFSS 1461
EI+ LRE++S L+L +K + + + I + Q+GDFF +
Sbjct: 1397 KEIKLLREQVSRLQLEEKGKKASSFDASS-SITKDMKGFKVVEVGLAMNTKKQIGDFFKN 1455
>YDR192c [YU] KOG0845 Nuclear pore complex Nup98 component (sc
Nup145/Nup100/Nup116)
Length = 430
Score = 118 bits (295), Expect = 8e-26
Identities = 120/378 (31%), Positives = 157/378 (40%), Gaps = 75/378 (19%)
Query: 442 NSFAKGFSFTPKNMTDSTNAESEGSQNPLLSSGSSPAFGKPAFGQAT----------FGQ 491
N F + T + S G+ N + ++ AFG P FG T FG
Sbjct: 23 NPFTNNAASTNNMGGSAFGRPSFGTANTMTGGTTTSAFGMPQFGTNTGNTGNTSISAFGN 82
Query: 492 VTSSQATPGQSAFGQPAFGLPTFGKPVSSQPTSGQSAFGQPAFGEPAFGKPASSQPTSGQ 551
TS+ A P SAFG PAFG P++ P S SAFG P+FG FG A++ G+
Sbjct: 83 -TSNAAKP--SAFGAPAFGSSA---PINVNPPSTTSAFGAPSFGSTGFGAMAATSNPFGK 136
Query: 552 SAVGQ-PAFGQPAFGEPAFGKPASSQPTSGQSAFGQAAFGPPTFGKPASSQPTSGQPAFG 610
S AFGQPAFG P+SS S SAFG A+ P T P FG
Sbjct: 137 SPGSMGSAFGQPAFGANKTAIPSSSVSNSNNSAFGAASNTPLTTTSP-----------FG 185
Query: 611 QPAFGQPVSDQSAPSKPAFGKPTFGSTSFGTQSQTNTTSPLSEEAETSSVFGTPSFGSTS 670
+ Q S ++ + AFGKPTFG+ TNT SP TS+ GT G +
Sbjct: 186 --SLQQNASQNASSTSSAFGKPTFGAA-------TNTQSPFGTIQNTSTSSGT---GVSP 233
Query: 671 FGIQGANV----------------TSPFGTNT-KISSESSFGKSLFGTSQ---------- 703
FG G N +SPFGT T K ++ ++ G S FGT+
Sbjct: 234 FGTFGTNSNNKSPFSNLQSGAGAGSSPFGTTTSKANNNNNVGSSAFGTTNNQSPFSGGSG 293
Query: 704 --FGSDSAVTNPAPNSFATSAKLSSPFSAFATDQKTINPFETQTSDPFGHLNSKKEDTKS 761
FGS S + +F +S + FS T Q N +Q++ FG + S
Sbjct: 294 GTFGSASNLNKNTNGNFQSSFG-NKGFSFGITPQNDANKV-SQSNPSFGQTMPNTDPNIS 351
Query: 762 F----NFTGFGESISEAN 775
N T FG + N
Sbjct: 352 LKSNGNATSFGFGQQQMN 369
Score = 109 bits (273), Expect = 3e-23
Identities = 106/339 (31%), Positives = 138/339 (40%), Gaps = 63/339 (18%)
Query: 487 ATFGQVTSSQATPGQSAFGQPAFGLPTFGKPVSSQPTSGQSAFGQPAFG----------E 536
+ FG +S A P S G+ F +S G SAFG+P+FG
Sbjct: 2 SAFGNPFTSGAKPNLSNTS----GINPFTNNAASTNNMGGSAFGRPSFGTANTMTGGTTT 57
Query: 537 PAFGKPASSQPTSGQSAVGQPAFGQ-------PAFGEPAFGK--PASSQPTSGQSAFGQA 587
AFG P T AFG AFG PAFG P + P S SAFG
Sbjct: 58 SAFGMPQFGTNTGNTGNTSISAFGNTSNAAKPSAFGAPAFGSSAPINVNPPSTTSAFGAP 117
Query: 588 AFGPPTFG-KPASSQPTSGQPAFGQPAFGQPVSDQSAPSKPAFGKPTFGSTSFGTQSQT- 645
+FG FG A+S P P AFGQP + + P+ +++FG S T
Sbjct: 118 SFGSTGFGAMAATSNPFGKSPGSMGSAFGQPAFGANKTAIPSSSVSNSNNSAFGAASNTP 177
Query: 646 -NTTSPL--------SEEAETSSVFGTPSFGSTSFGIQGANVTSPFGTNTKISSESSFGK 696
TTSP + TSS FG P+FG+ + N SPFGT S+ S G
Sbjct: 178 LTTTSPFGSLQQNASQNASSTSSAFGKPTFGAAT------NTQSPFGTIQNTSTSSGTGV 231
Query: 697 SLFGTSQFGSDSAVTNPAPNSFATSAKLSSPF---------------SAFATDQKTINPF 741
S FGT FG++S +P N + + SSPF SAF T +PF
Sbjct: 232 SPFGT--FGTNSNNKSPFSNLQSGAGAGSSPFGTTTSKANNNNNVGSSAFGTTNNQ-SPF 288
Query: 742 ETQTSDPFGHLNSKKEDT-----KSFNFTGFGESISEAN 775
+ FG ++ ++T SF GF I+ N
Sbjct: 289 SGGSGGTFGSASNLNKNTNGNFQSSFGNKGFSFGITPQN 327
Score = 92.4 bits (228), Expect = 5e-18
Identities = 85/295 (28%), Positives = 124/295 (41%), Gaps = 51/295 (17%)
Query: 527 SAFGQP--AFGEPAFGKPASSQPTSGQSAVGQPAFGQPAFGEPAFGKPASSQPTSGQSAF 584
SAFG P + +P + P + +A G AFG P+FG ++ T G +
Sbjct: 2 SAFGNPFTSGAKPNLSNTSGINPFTNNAA-STNNMGGSAFGRPSFG--TANTMTGGTTT- 57
Query: 585 GQAAFGPPTFGKPASSQPTSGQPAFGQ-------PAFGQPVSDQSAP-------SKPAFG 630
+AFG P FG + + AFG AFG P SAP + AFG
Sbjct: 58 --SAFGMPQFGTNTGNTGNTSISAFGNTSNAAKPSAFGAPAFGSSAPINVNPPSTTSAFG 115
Query: 631 KPTFGSTSFGTQSQTNTTSPLSEEAETSSVFGTPSFGSTSFGIQGANVT----SPFG--T 684
P+FGST FG + T+ S S FG P+FG+ I ++V+ S FG +
Sbjct: 116 APSFGSTGFGAMAATSNPFGKS-PGSMGSAFGQPAFGANKTAIPSSSVSNSNNSAFGAAS 174
Query: 685 NTKISSESSFG-------------KSLFGTSQFGSDSAVTNP---APNSFATSAKLSSPF 728
NT +++ S FG S FG FG+ + +P N+ +S SPF
Sbjct: 175 NTPLTTTSPFGSLQQNASQNASSTSSAFGKPTFGAATNTQSPFGTIQNTSTSSGTGVSPF 234
Query: 729 SAFATDQKTINPFET------QTSDPFGHLNSKKEDTKSFNFTGFGESISEANHS 777
F T+ +PF S PFG SK + + + FG + +++ S
Sbjct: 235 GTFGTNSNNKSPFSNLQSGAGAGSSPFGTTTSKANNNNNVGSSAFGTTNNQSPFS 289
>At1g10390 [YU] KOG0845 Nuclear pore complex Nup98 component (sc
Nup145/Nup100/Nup116)
Length = 1043
Score = 115 bits (287), Expect = 7e-25
Identities = 118/356 (33%), Positives = 151/356 (42%), Gaps = 69/356 (19%)
Query: 465 GSQNPL-LSSGSSPAFGKPAFGQAT-------------FGQVTSSQATPGQSAFGQPA-- 508
GS NP SSG+SP + FGQ + FG A G S FG +
Sbjct: 3 GSSNPFGQSSGTSPFGSQSLFGQTSNTSSNNPFAPATPFGTSAPFAAQSGSSIFGSTSTG 62
Query: 509 -FGLPTFGKPVSSQPTSGQSAFGQPAFGE--PAFGKPASSQPTSGQSAVGQPAFGQPAFG 565
FG P P +S PT G S+ PAFG PAFG +S P G S GQ G
Sbjct: 63 VFGAPQTSSPFASTPTFGASS--SPAFGNSTPAFGASPASSPFGGSSGFGQKPLGFSTPQ 120
Query: 566 EPAFGKPA-SSQPTSGQSAFGQA----AFGPPTFGKP------ASSQPT---SGQPAFG- 610
FG SQP G ++FG + A P FG P A+S P+ S PAFG
Sbjct: 121 SNPFGNSTQQSQPAFGNTSFGSSTPFGATNTPAFGAPSTPSFGATSTPSFGASSTPAFGA 180
Query: 611 --QPAFGQPVSDQ-SAPSKPAFGK----------PTFGSTSFGTQSQTNTTSPLSEEAET 657
PAFG S A + PAFG TFG+T FG+ ++ + A
Sbjct: 181 TNTPAFGASNSPSFGATNTPAFGASPTPAFGSTGTTFGNTGFGSGGAFGASNTPAFGASG 240
Query: 658 SSVF---GTPSFGSTSFGIQGANVTSPFGTNTKISSESSFGKSLFGTSQFGSDSAVTNPA 714
+ F GTP+FG++S GA+ T FG SS +FG S T FG+ +N +
Sbjct: 241 TPAFGASGTPAFGASSTPAFGASSTPAFGA----SSTPAFGGS--STPSFGA----SNTS 290
Query: 715 PNSFATSAKLSSPFSAFATDQKTINPFETQTSDPFGHLNSKKEDTKSFNFTGFGES 770
SF +S SAF + P PFG + T +F +GFG+S
Sbjct: 291 SFSFGSSPAFGQSTSAFGSSAFGSTP------SPFGG-QGAQASTPTFGGSGFGQS 339
Score = 108 bits (270), Expect = 6e-23
Identities = 142/448 (31%), Positives = 183/448 (40%), Gaps = 80/448 (17%)
Query: 448 FSFTPKNMTDSTNAESEGSQNPLLSSGSSPAFGK--PAFGQATFGQVTSSQATPGQSAFG 505
F T + + S + P + SSPAFG PAFG + +S G S FG
Sbjct: 56 FGSTSTGVFGAPQTSSPFASTPTFGASSSPAFGNSTPAFGASP-----ASSPFGGSSGFG 110
Query: 506 QPAFGLPT-----FGKPVS-SQPTSGQSAFGQP----AFGEPAFGKP------ASSQPTS 549
Q G T FG SQP G ++FG A PAFG P A+S P+
Sbjct: 111 QKPLGFSTPQSNPFGNSTQQSQPAFGNTSFGSSTPFGATNTPAFGAPSTPSFGATSTPSF 170
Query: 550 GQS------AVGQPAFG---QPAFG---EPAFGKPASSQPTSGQ--SAFGQAAFGP-PTF 594
G S A PAFG P+FG PAFG AS P G + FG FG F
Sbjct: 171 GASSTPAFGATNTPAFGASNSPSFGATNTPAFG--ASPTPAFGSTGTTFGNTGFGSGGAF 228
Query: 595 GKPASSQP---TSGQPAF---GQPAFGQPVSDQ-SAPSKPAFG---KPTFGSTSFGTQSQ 644
G AS+ P SG PAF G PAFG + A S PAFG P FG +S +
Sbjct: 229 G--ASNTPAFGASGTPAFGASGTPAFGASSTPAFGASSTPAFGASSTPAFGGSSTPSFGA 286
Query: 645 TNTTS----PLSEEAETSSVFGTPSFGST--SFGIQGANVTSP-FGTNTKISSESSFGKS 697
+NT+S +++S FG+ +FGST FG QGA ++P FG S FG+S
Sbjct: 287 SNTSSFSFGSSPAFGQSTSAFGSSAFGSTPSPFGGQGAQASTPTFG-------GSGFGQS 339
Query: 698 LFGTSQFGSDS---AVTNPAPNSFAT--SAKLSSPFSAFATDQKTINPF---ETQTSDPF 749
FG Q GS + A T A T + KL S + A +K + Q D
Sbjct: 340 TFGGQQGGSRAVPYAPTVEADTGTGTQPAGKLESISAMPAYKEKNYEELRWEDYQRGDKG 399
Query: 750 GHLNSKKEDTKSFNFTGFGESISEANHSLPSVT--QDSLNSKEVSDSTIENDQSEVPSPA 807
G L + + + GFG S S+ N PS Q S N S+ + +P
Sbjct: 400 GPLPAGQSPGNA----GFGISPSQPNPFSPSPAFGQTSANPTNPFSSSTSTNPFAPQTPT 455
Query: 808 NXXXXXXXXXXXXXNIVSSTDESDSLYG 835
+ S +L+G
Sbjct: 456 IASSSFGTATSNFGSSPFGVTSSSNLFG 483
Score = 95.1 bits (235), Expect = 7e-19
Identities = 126/392 (32%), Positives = 165/392 (41%), Gaps = 76/392 (19%)
Query: 438 FETTNSFAKGFSFTPKNMTDSTNAESEGSQNPLLSSGSSPAFGK---PAFGQAT---FGQ 491
F +N+ A G S TP T A S P + S+PAFG PAFG ++ FG
Sbjct: 228 FGASNTPAFGASGTPAFGASGTPAFG-ASSTPAFGASSTPAFGASSTPAFGGSSTPSFGA 286
Query: 492 VTSSQATPGQS-AFGQP--AFGLPTFGKPVS---------SQPTSGQSAFGQPAFGEPAF 539
+S + G S AFGQ AFG FG S S PT G S FGQ FG
Sbjct: 287 SNTSSFSFGSSPAFGQSTSAFGSSAFGSTPSPFGGQGAQASTPTFGGSGFGQSTFGGQQG 346
Query: 540 GKPASSQPTSGQSAVG---QPA------FGQPAFGEPAF----------GKPASSQPTSG 580
G A + ++ G QPA PA+ E + G P +G
Sbjct: 347 GSRAVPYAPTVEADTGTGTQPAGKLESISAMPAYKEKNYEELRWEDYQRGDKGGPLP-AG 405
Query: 581 QSAFGQAAFGPPTFGKPASSQPTSGQPAFGQPAFG--QPVSDQSAPSKPAFGKPTFGSTS 638
QS G A FG P+ P S PAFGQ + P S ++ + A PT S+S
Sbjct: 406 QSP-GNAGFGI----SPSQPNPFSPSPAFGQTSANPTNPFSSSTSTNPFAPQTPTIASSS 460
Query: 639 FGTQSQTNTTSPLSEEAETSSVFGTPSFGSTSFGIQGANVTSPFGTNTKISSESSFGKSL 698
FGT + +SP +S++FG+ S ST+ + G+ +S FGT T FG S
Sbjct: 461 FGTATSNFGSSPFG-VTSSSNLFGSGS--STTTSVFGS--SSAFGTTT---PSPLFGSS- 511
Query: 699 FGTSQFGSDSAVTNPAPNSFATSA-KLSSPFSAFATDQKTINPFETQTSDPFGHLNSKKE 757
T FGS S++ AP AT A S P + F + P QT FG S
Sbjct: 512 -STPGFGSSSSIFGSAPGQGATPAFGNSQPSTLFNS-----TPSTGQTGSAFGQTGSA-- 563
Query: 758 DTKSFNFTGFGESISEANHSLPSVTQDSLNSK 789
F FG+S S P+ Q+S+ +K
Sbjct: 564 ------FGQFGQS------SAPAFGQNSIFNK 583
Score = 68.2 bits (165), Expect = 9e-11
Identities = 96/300 (32%), Positives = 118/300 (39%), Gaps = 59/300 (19%)
Query: 465 GSQNPLLSSGSSPAFGKPAFGQATFGQVTSSQATP--GQSAFGQPA------FGLPTFGK 516
G + L +G SP G A FG ++ SQ P AFGQ + F T
Sbjct: 396 GDKGGPLPAGQSP-------GNAGFG-ISPSQPNPFSPSPAFGQTSANPTNPFSSSTSTN 447
Query: 517 PVSSQ-PTSGQSAFGQPA--FGEPAFGKPASSQPTSGQSAVGQPAFGQP-AFG----EPA 568
P + Q PT S+FG FG FG +SS S+ FG AFG P
Sbjct: 448 PFAPQTPTIASSSFGTATSNFGSSPFGVTSSSNLFGSGSSTTTSVFGSSSAFGTTTPSPL 507
Query: 569 FGKPASSQPTSGQSAFGQA-------AFGPPTFGKPASSQPTSGQP--AFGQP--AFGQP 617
FG ++ S S FG A AFG +S P++GQ AFGQ AFGQ
Sbjct: 508 FGSSSTPGFGSSSSIFGSAPGQGATPAFGNSQPSTLFNSTPSTGQTGSAFGQTGSAFGQ- 566
Query: 618 VSDQSAPS---KPAFGKPTFGSTSFGTQSQTNTTSPLSEEAETSSVFGTP---------- 664
SAP+ F KP+ G + + S T TTS S +T TP
Sbjct: 567 FGQSSAPAFGQNSIFNKPSTGFGNMFSSSSTLTTSSSSPFGQTMPAGVTPFQSAQPGQAS 626
Query: 665 -SFGSTSFGI-QGANVTSPFGTNTKISSESSFGKSLFGTSQFGSDSAVTNP--APNSFAT 720
FG +FG Q AN T G FG+ FG S +S V P N F T
Sbjct: 627 NGFGFNNFGQNQAANTTGNAG------GLGIFGQGNFGQSPAPLNSVVLQPVAVTNPFGT 680
>At1g59660 [YU] KOG0845 Nuclear pore complex Nup98 component (sc
Nup145/Nup100/Nup116)
Length = 997
Score = 94.7 bits (234), Expect = 9e-19
Identities = 128/423 (30%), Positives = 163/423 (38%), Gaps = 100/423 (23%)
Query: 465 GSQNPLLSSGSSPAFGK---PAFGQATFGQVTSSQATPGQSAFG------QPAFGLPTFG 515
GS + S+P+FG P G +TFGQ + +TP S FG QPAFG TFG
Sbjct: 84 GSSTQAFGASSTPSFGSSNSPFGGTSTFGQKSFGLSTPQSSPFGSTTQQSQPAFGNSTFG 143
Query: 516 K--PVSSQPTSGQSAFGQPAFG-----------EPAFGKPASS----QPTSGQSAVGQPA 558
P + T A PAFG P FG ++ T G A PA
Sbjct: 144 SSTPFGASTTPAFGASSTPAFGVSNTSGFGATNTPGFGATNTTGFGGSSTPGFGASSTPA 203
Query: 559 FGQ---PAFGE---PAFGKPASSQPTSGQS---AFGQA--AFGPPTFGKP----ASSQPT 603
FG PAFG P FG +SS P G S AFG + AFG TF +SS PT
Sbjct: 204 FGSTNTPAFGASSTPLFG--SSSSPAFGASPAPAFGSSGNAFGNNTFSSGGAFGSSSTPT 261
Query: 604 SGQP---AFG---QPAFGQPVSDQSAPSKPAFGKPTFGSTSFGTQSQTNTTSPLSEEAET 657
G AFG P+F S S AFG +FGST S +T SP +
Sbjct: 262 FGASNTSAFGASSSPSFNFGSSPAFGQSTSAFGSSSFGSTQ---SSLGSTPSPFGAQGAQ 318
Query: 658 SSVFGTPSFG--STSFGIQGANVTSPFG--TNTKISSESSF------------------- 694
+S T +FG ST G QG + P+ T+T +ES
Sbjct: 319 AS---TSTFGGQSTIGGQQGGSRVIPYAPTTDTASGTESKSERLQSISAMPAHKGKNMEE 375
Query: 695 ------------GKSLFGTSQFGSDSAVTNPAPNSFATSAKLS----SPFSAFATDQKTI 738
G+ G S G+ VTN P+ F+TS S +P + F+ T
Sbjct: 376 LRWEDYQRGDKGGQRSTGQSPEGAGFGVTNSQPSIFSTSPAFSQTPVNPTNPFSQTTPTS 435
Query: 739 N-----PFETQTSDPFGHLNSKK-EDTKSFNFTGFGESISEANHSLPSVTQDSLNSKEVS 792
N F T+ FG + T S + FG S S ++ + S
Sbjct: 436 NTNFSPSFSQPTTPSFGQPTTPSFRSTVSNTTSVFGSSSSLTTNTSQPLGSSIFGSTPAH 495
Query: 793 DST 795
ST
Sbjct: 496 GST 498
Score = 90.9 bits (224), Expect = 1e-17
Identities = 104/332 (31%), Positives = 138/332 (41%), Gaps = 44/332 (13%)
Query: 466 SQNPLLSSGSSPAFGKPAFGQATFGQVTSSQATPGQSAFGQPAFGLPTFGKPVSSQPTSG 525
+ NP S S FG + FGQ ++ + + F FG T P +Q +G
Sbjct: 6 NNNPFGQSSISSPFGTQT--HSLFGQTNNNASN---NPFATKPFGTST---PFGAQ--TG 55
Query: 526 QSAFGQPAFGEPAFGKPASSQPTSGQ-SAVGQPAFGQPAFGEPAFGKPASSQPTSGQSAF 584
S FG + G FG P +S P A G A P+FG +S+ P G S F
Sbjct: 56 SSMFGGTSTG--VFGAPQTSSPFGASPQAFGSSTQAFGASSTPSFG--SSNSPFGGTSTF 111
Query: 585 GQAAFGPPT-FGKPASSQPTSGQPAFGQPAFGQ--PVSDQSAP-----SKPAFGKPT--- 633
GQ +FG T P S QPAFG FG P + P S PAFG
Sbjct: 112 GQKSFGLSTPQSSPFGSTTQQSQPAFGNSTFGSSTPFGASTTPAFGASSTPAFGVSNTSG 171
Query: 634 FGSTSFGTQSQTNTTSPLSEEAETSSVFGTPSFGSTSFGIQGANVTSPFGTNTKISSESS 693
FG+T+ TNTT TP+FGST+ GA+ T FG+ SS +
Sbjct: 172 FGATNTPGFGATNTTGFGGSSTPGFGASSTPAFGSTNTPAFGASSTPLFGS----SSSPA 227
Query: 694 FGKS---LFGTS--QFGSDSAVTNPAPNSFATSAKLSSPFSAFATDQKTINPFETQTSDP 748
FG S FG+S FG+++ + A S +T +S SAF F +S
Sbjct: 228 FGASPAPAFGSSGNAFGNNTFSSGGAFGSSSTPTFGASNTSAFGASSSP--SFNFGSSPA 285
Query: 749 FGHLNSKKEDTKSFNFTGFGESISEANHSLPS 780
FG + T +F + FG + S S PS
Sbjct: 286 FG------QSTSAFGSSSFGSTQSSLG-STPS 310
Score = 84.3 bits (207), Expect = 1e-15
Identities = 131/446 (29%), Positives = 172/446 (38%), Gaps = 135/446 (30%)
Query: 443 SFAKGFSFTPKNMTDSTNAESEG-SQNPLLSSGSSPAFGK---PAFGQA--TFGQVT--- 493
S GF + STN + G S PL S SSPAFG PAFG + FG T
Sbjct: 191 SSTPGFGASSTPAFGSTNTPAFGASSTPLFGSSSSPAFGASPAPAFGSSGNAFGNNTFSS 250
Query: 494 ----SSQATPGQSAFGQPAFGL---PTFGKPVSSQPTSGQS--AFGQPAFGEP------- 537
S +TP A AFG P+F S P GQS AFG +FG
Sbjct: 251 GGAFGSSSTPTFGASNTSAFGASSSPSFN--FGSSPAFGQSTSAFGSSSFGSTQSSLGST 308
Query: 538 -----AFGKPASSQPTSGQSAVGQPAFGQPAFG-----EPAFGKPASSQPTSGQSAF--- 584
A G AS+ GQS +G G + A G + S+ SA
Sbjct: 309 PSPFGAQGAQASTSTFGGQSTIGGQQGGSRVIPYAPTTDTASGTESKSERLQSISAMPAH 368
Query: 585 -------------------GQAAFGPPTFGKP---ASSQPT--SGQPAFGQ--------- 611
GQ + G G +SQP+ S PAF Q
Sbjct: 369 KGKNMEELRWEDYQRGDKGGQRSTGQSPEGAGFGVTNSQPSIFSTSPAFSQTPVNPTNPF 428
Query: 612 ------------PAFGQPVSDQ-SAPSKPAFGKPTFGSTS-FGTQSQ--TNTTSPLSEEA 655
P+F QP + P+ P+F +TS FG+ S TNT+ PL
Sbjct: 429 SQTTPTSNTNFSPSFSQPTTPSFGQPTTPSFRSTVSNTTSVFGSSSSLTTNTSQPLG--- 485
Query: 656 ETSSVFG-TPSFGST-SFGIQGAN--VTSP-FGTNTKISSES----SFGKSLFG---TSQ 703
SS+FG TP+ GST F I G N +SP FG+N + + S LFG T
Sbjct: 486 --SSIFGSTPAHGSTPGFSIGGFNNSQSSPLFGSNPSFAQNTTPAFSQTSPLFGQNTTPA 543
Query: 704 FGSDSAV----TNPA--------------PNSFATSAKLSSPFSAFATDQKTINPFET-Q 744
G S+V TNPA N+F++S+ L++ S F + PF++ Q
Sbjct: 544 LGQSSSVFGQNTNPALVQSNTFSTPSTGFGNTFSSSSSLTTSISPFGQITPAVTPFQSAQ 603
Query: 745 TSDPFGHLNSKKEDTKSFNFTGFGES 770
+ P G +F F FG++
Sbjct: 604 PTQPLG----------AFGFNNFGQT 619
>7300534 [YU] KOG0845 Nuclear pore complex Nup98 component (sc
Nup145/Nup100/Nup116)
Length = 546
Score = 86.7 bits (213), Expect = 3e-16
Identities = 90/276 (32%), Positives = 120/276 (42%), Gaps = 58/276 (21%)
Query: 437 FFETTNSFAKGFSFTPKNMTDSTNAESEGSQNPLLSSGSSPAFGK----PAFGQATFGQV 492
F TTN+ G T +T A + G++ P ++ P+FG P FG A
Sbjct: 2 FTPTTNNAIGG-------ATAATGAFAFGAR-PATTTAPPPSFGAATSTPTFGAAP--AT 51
Query: 493 TSSQATPGQS-AFGQPAFGLPTFGKPVSSQPTSGQSAFGQPAFGE----PAFGKPASSQ- 546
TS A P + AFG PA P FG P S+ P G ++ PAFG PAFG PA++
Sbjct: 52 TSLFAAPAATPAFGAPA-ATPAFGAPAST-PGFGATSTAAPAFGTAAATPAFGIPAATSA 109
Query: 547 -------PTSGQSAVGQPAFGQPA----FGEPA----FGKPASSQPTSGQSAFGQAAFGP 591
P G +A PAFG PA FG PA FG PA++ ++ +AFG
Sbjct: 110 FGAPAATPAFG-AAAATPAFGAPAATPAFGAPAATSAFGAPAATTAFGAPASTQASAFGA 168
Query: 592 P-----------TFGKPASSQPTSGQPAFG------QPAFGQPVSDQSAPSKPAFGKP-- 632
P +F PA+S PT+ PAFG A P S S +F KP
Sbjct: 169 PAPAVGTVAPTFSFATPATSAPTTAPPAFGFGTTATTAAAAMPASLSSGIGSFSFPKPQA 228
Query: 633 -TFGSTSFGTQSQTNTTSPLSEEAETSSVFGTPSFG 667
T S +F T + T T P + + + T + G
Sbjct: 229 TTAASLNFNTTTTTATAQPFNTGLKLGTTNATTTLG 264
>SPAC23D3.06c [YU] KOG3630 Nuclear pore complex Nup214/CAN component
Length = 1325
Score = 84.7 bits (208), Expect = 1e-15
Identities = 161/710 (22%), Positives = 274/710 (37%), Gaps = 141/710 (19%)
Query: 135 NVLLASNANV-VFKISLSQKHSSEQLHSITGCIAIDTLKHQLYVLHKNGSIAVLDEQFNV 193
N+++ N + VF +SLS+ L C A Q + NG+++ +
Sbjct: 176 NLVILRNLKLEVFLLSLSKFQVESPLAKDATCAAWSRRGKQCVIGFNNGTMSQYTPAGEI 235
Query: 194 TSSIEKPSLDEPNEPLSINALSESSLLVSYGEPVDASEE--DIMYDLTVYFVNVNTK--- 248
I +P E I+ + +V Y S E + ++ + ++V
Sbjct: 236 KLRIPRPPSLENYFVECISWIENREFVVFYSPLTSLSNESDEPPHESECFVISVGMNGHF 295
Query: 249 SFTPSMDIAPPYSTVKRNPSYYSQTLYQLAQQLPHLFVIGSSCASELSIATPNV------ 302
+F + D PP+ V R +Y +L+ L L V+ ++ +++L + ++
Sbjct: 296 NFGKAGDPTPPFGAVNRRDHHYIASLHAWKPDLRSLVVVANTASADLGVLALSMEKNQWS 355
Query: 303 MYKPDQDAACAILPINPETDNDTQPIGMALDVFSSGTVYEPCSGVEAADN---LPILYVL 359
+ + A LP + + D+D+ P + +D ++ + +P EA + LPI++V
Sbjct: 356 ILNIVDETKRASLPYSNKKDSDSSPTALVMDFTATDRISKPLDPTEAPADCSPLPIVWVF 415
Query: 360 TNLGELFCWALFHHSALQNSSFTLEPTKTQYVQSFEILSHKIESGSSSMEKEKVTLISPQ 419
+ +L + +F+ A+ S S++ ++ +I +
Sbjct: 416 NDEFQLVAYRIFYADAI----------------------------SKSIDYPEMNVIKDK 447
Query: 420 DTKNTITEVRKVPEQSSFFETTNSFAKGFSFTPKNMTDSTNAESEGSQNPLLSSGSSPAF 479
+ +T+ ++S E + K S KN LSS SSP
Sbjct: 448 NKDSTV--------RASNNENIPTPDKQASPFVKN----------------LSSTSSPFS 483
Query: 480 GKPAFGQATFGQVTSSQATPGQSAFGQPAFGLPTFGKPVSSQPTSGQSAFGQ-PAFGEPA 538
AFG FGQ TS A P FG+P S FGQ P FG+P
Sbjct: 484 QSSAFGNFKFGQATSFDKGLSTDASSGAKSNTPVFGQP---------STFGQAPVFGQP- 533
Query: 539 FGKPASSQPTSGQSAVGQ-PAFGQPAFGEPAFGKPASSQPTSGQSAFGQAAFGPPTFGKP 597
SA GQ P FGQP+ AFG+ + S TS + + FG TF P
Sbjct: 534 -------------SAFGQAPVFGQPS----AFGQSSFSFGTSNMNQ--KLDFG--TFKSP 572
Query: 598 ASSQPTSGQPAFGQPAFGQPVSDQSAPSKPAFGKPTFGSTSFGTQSQTNTTSPLSEEAET 657
S T G+ + SA K +F T + S T S N S + ++ E
Sbjct: 573 LSGAAT------GEAKTNLEKAVTSASGKASF---TGFAPSQSTTSGLNFDS-IPKDNEA 622
Query: 658 SSVFGTPSFGS-TSFGIQGANVT---------SPFGTNTKISS------ESSFGKSLFGT 701
+S+FG+ + + G Q +N T +TKI E S +++ G
Sbjct: 623 ASIFGSSQVSTKNTSGFQFSNNTLLADNVDEDIESDHDTKIEELANSDVEPSTEQNIGGD 682
Query: 702 SQFGSDSAVTNPAPN-SFATSA--KLSSPFSAFATDQKTI-------NPFETQTSDPFGH 751
+G+ + + P P+ SF + K ++P F+ KT P + PF
Sbjct: 683 VSWGASTFQSKPQPSFSFGLTLDDKSNTPGKNFSIFGKTAETQVEQKKPENNVLTKPFSF 742
Query: 752 LNSKKEDTKSFNFTGFGESISE--ANHSLPS--VTQDSLNSKEVSDSTIE 797
S K + N GE + + + +LPS +T+ S N E ++ + E
Sbjct: 743 APSDK-SMFAANIPSAGEGLDQQKTSKALPSTGITKLSENDNEKAEESNE 791
Score = 57.8 bits (138), Expect = 1e-07
Identities = 68/246 (27%), Positives = 100/246 (40%), Gaps = 54/246 (21%)
Query: 573 ASSQPTSGQSAFGQAAFGPPT-FGKPASSQPTSGQPAFGQPAFGQPVSDQSAPSKPAFGK 631
++S P S SAFG FG T F K S+ +SG + P FGQP + A P FG+
Sbjct: 477 STSSPFSQSSAFGNFKFGQATSFDKGLSTDASSGAKS-NTPVFGQPSTFGQA---PVFGQ 532
Query: 632 PTFGSTSFGTQSQTNTTSPLSEEAETSSVFGTPS-FGSTSFGIQGANVTSPFGTNTKISS 690
P ++FG + VFG PS FG +SF +N+ N K+
Sbjct: 533 P----SAFG----------------QAPVFGQPSAFGQSSFSFGTSNM------NQKLD- 565
Query: 691 ESSFGKSLFGTSQFGSDSAVTNPAPNSF---ATSAKLSSPFSAFATDQKTIN-------P 740
FGT + A T A + TSA + F+ FA Q T + P
Sbjct: 566 --------FGTFKSPLSGAATGEAKTNLEKAVTSASGKASFTGFAPSQSTTSGLNFDSIP 617
Query: 741 FETQTSDPFGHLNSKKEDTKSFNF---TGFGESISEANHSLPSVTQDSLNSKEVSDSTIE 797
+ + + FG ++T F F T +++ E S + L + +V ST +
Sbjct: 618 KDNEAASIFGSSQVSTKNTSGFQFSNNTLLADNVDEDIESDHDTKIEELANSDVEPSTEQ 677
Query: 798 NDQSEV 803
N +V
Sbjct: 678 NIGGDV 683
>7303453 [YU] KOG3091 Nuclear pore complex p54 component (sc Nup57)
Length = 610
Score = 83.2 bits (204), Expect = 3e-15
Identities = 91/280 (32%), Positives = 113/280 (39%), Gaps = 49/280 (17%)
Query: 436 SFFETTNSFAKGFSFTPKNMTDSTNAESEGSQNPLLSSGSSPAFGKPAFGQATFGQVTSS 495
SFF + S G + TP T G +S +PAFG A FG ++
Sbjct: 2 SFFGSNTSL--GATSTPAKTTGGLFGSPFGGT--AATSQPAPAFGAQATSTPAFGAQPAT 57
Query: 496 QATPGQSAFGQPAFGLPTFGKPVSSQPTSGQSAFGQPAFGE-PAFGKPASSQPTSGQSAV 554
A SAFG A P FG +G SAFG AFG PAFG ++ +G
Sbjct: 58 SAFGAGSAFGATA-AAPAFGA------ATGTSAFGGSAFGSTPAFGAATTTTAGTGLGGG 110
Query: 555 GQPAFGQ-PAFGEPA-FGKPASSQPTSGQSAFGQAAFGPPTFGKPASSQPTSGQPAFGQ- 611
G FG PA + FG PA+S S FGQ A AS+ P SG FG
Sbjct: 111 GFGGFGAAPATSQAGLFGAPATSAAPPAFSGFGQQA--------AASTAPASGFSGFGTT 162
Query: 612 ----PAFGQPVSDQSAPSKPAFGKPTFGSTSFGTQSQTNTTSPLSEEAETSSVFGTPSFG 667
PAFG + QS FG FGST FG + T T G FG
Sbjct: 163 TTSAPAFGGFGTSQST----GFGGGAFGST-FGKPANTTVTP------------GFGGFG 205
Query: 668 STSFGIQGANVTSPFGTNTKISSESSFGKSLFGTSQFGSD 707
TSF + P IS++ +F +S+ S FG +
Sbjct: 206 GTSFMLG-----QPQQQPAPISADEAFAQSILNVSIFGDE 240
>7301054 [YU] KOG0845 Nuclear pore complex Nup98 component (sc
Nup145/Nup100/Nup116)
Length = 1601
Score = 77.0 bits (188), Expect = 2e-13
Identities = 111/367 (30%), Positives = 146/367 (39%), Gaps = 107/367 (29%)
Query: 474 GSSPAFGKPAFGQATFGQVTSSQATP-GQSAFGQPAFGLPTFG--KPVSSQPTSGQSAFG 530
G+ P+FG + G ++ TP GQSAFG+PA P FG ++QP QS FG
Sbjct: 4 GAKPSFGATPAATSFGGFSGTTTTTPFGQSAFGKPA--APAFGNTSTFAAQPAQ-QSLFG 60
Query: 531 ------QPAFG------EPAFGKPASSQPT----------------SGQSAVGQPAFGQP 562
QPA G FG A++QPT S Q+A FGQ
Sbjct: 61 AAATPAQPAGGLFGANTSTGFGSTATAQPTAFGAFSQPQQTSNIFGSTQTAASTSLFGQS 120
Query: 563 AFGEPAFGKPASSQPTSGQSAFGQAAFGPPT---FGKPASSQPTSGQPAFGQPA------ 613
PAFG +++PT +AFGQ A PT FG+PA++ T+G FG A
Sbjct: 121 TL--PAFG---AAKPT--MTAFGQTAAAQPTGSLFGQPAAATSTTGFGGFGTSAPTTTNV 173
Query: 614 FGQPVSDQSA-PSKPAFG-------------KPTFGSTSFGTQSQTNTTS------PLSE 653
FG + A P A G +PT G+ + Q N+ + +
Sbjct: 174 FGSGTASAFAQPQATAVGASGVNTGTAVAKYQPTIGTDTLMKSGQANSVNTKQHCITAMK 233
Query: 654 EAETSSVFGT-----------PSFGST--SFGIQGANVTSP--------FGTNTKISSES 692
E E S+ P G+ +FG GA VT P FG +T S
Sbjct: 234 EFEGKSLEELRLEDYMCGRKGPQAGNAPGAFGF-GAQVTQPAQPASGGLFG-STAQPSTG 291
Query: 693 SFG------KSLFGTSQFGSDSAVTNPAPNSFATSAKLSSPFSAFATDQKTINPFETQTS 746
FG KS+FGT+ FG A N + + L PF A T PF +
Sbjct: 292 LFGQTVTENKSMFGTTAFGQQPATNNAFGAATQQNNFLQKPFGA-----TTTTPFAAPAA 346
Query: 747 D---PFG 750
D PFG
Sbjct: 347 DASNPFG 353
Score = 63.5 bits (153), Expect = 2e-09
Identities = 76/257 (29%), Positives = 105/257 (40%), Gaps = 49/257 (19%)
Query: 512 PTFGKPVSSQPTSGQSAFGQPA-FGEPAFGKPASSQPTSGQSAVGQPAFGQPAFGEPAFG 570
P+FG ++ G S FG+ AFGKPA+ + + QPA Q FG A
Sbjct: 7 PSFGATPAATSFGGFSGTTTTTPFGQSAFGKPAAPAFGNTSTFAAQPA-QQSLFGAAA-- 63
Query: 571 KPASSQPTSGQSAFGQAAFGPPT---FGKPASSQPTSGQPAFGQPAFGQPV-------SD 620
+QP G FG T FG A++QPT AFG AF QP S
Sbjct: 64 --TPAQPAGG-------LFGANTSTGFGSTATAQPT----AFG--AFSQPQQTSNIFGST 108
Query: 621 QSAPSKPAFGKPTFGSTSFGTQSQTNTTSPLSEEAE-TSSVFGTPSFGSTSFGIQGANVT 679
Q+A S FG+ T +FG T T + A+ T S+FG P+ +++ G G +
Sbjct: 109 QTAASTSLFGQSTL--PAFGAAKPTMTAFGQTAAAQPTGSLFGQPAAATSTTGFGGFGTS 166
Query: 680 SPFGTNTKISSESSFGKSLFGTSQFGSDSAVTNPAPNSFATSAKLSSPFSAFATDQKTIN 739
+P TN FGS +A P + A A + +A A Q TI
Sbjct: 167 APTTTNV-----------------FGSGTASAFAQPQATAVGASGVNTGTAVAKYQPTIG 209
Query: 740 PFETQTSDPFGHLNSKK 756
S +N+K+
Sbjct: 210 TDTLMKSGQANSVNTKQ 226
Score = 62.8 bits (151), Expect = 4e-09
Identities = 75/245 (30%), Positives = 98/245 (39%), Gaps = 40/245 (16%)
Query: 474 GSSPAFGKPAFGQATFGQVTSSQ----ATPGQSAFGQPAFGLPT---FGKPVS--SQPTS 524
G + K FG FGQ ++ A Q+ F Q FG T F P + S P
Sbjct: 294 GQTVTENKSMFGTTAFGQQPATNNAFGAATQQNNFLQKPFGATTTTPFAAPAADASNPFG 353
Query: 525 GQSAFGQPAFGEPAFGK-PASSQ-PTSGQSAVGQPAFGQPAFG---EPAFGKPASSQPTS 579
+ AFGQ G FG+ PA+S P GQ+ G FG A FG ++ P
Sbjct: 354 AKPAFGQ---GGSLFGQAPATSAAPAFGQTNTGFGGFGTTAGATQQSTLFGATPAADPNK 410
Query: 580 GQSAFGQAAFGPPT---FGKPASSQPTSGQPAFGQPAFGQPVSDQSAPSKPA--FGKPTF 634
G AA T FG PA+S T+G FG +KPA F PTF
Sbjct: 411 SAFGLGTAASAATTGFGFGAPATS--TAGGGLFG--------------NKPATSFAAPTF 454
Query: 635 GSTSFGTQSQTNTTSPLSEEAETSSVF--GTPSFGSTSFGIQGANVTSPFGTNTKISSES 692
G+TS + +N S A +F G ++ FG GA +P N + S
Sbjct: 455 GATSTASTPFSNFGLNTSTAATGGGLFNSGLNKPATSGFGGFGATSAAPLNFNAGNTGGS 514
Query: 693 SFGKS 697
FG +
Sbjct: 515 LFGNT 519
Score = 62.0 bits (149), Expect = 7e-09
Identities = 117/433 (27%), Positives = 159/433 (36%), Gaps = 125/433 (28%)
Query: 440 TTNSFAKGFSFTPKNMTDSTNAESEGSQNPLLSSGSSPAFGKPAFGQATFGQVTSSQATP 499
T A G P+ ++ + + L + PAFG FGQ ++Q P
Sbjct: 86 TAQPTAFGAFSQPQQTSNIFGSTQTAASTSLFGQSTLPAFGAAKPTMTAFGQTAAAQ--P 143
Query: 500 GQSAFGQPAFGLPT--FGKPVSSQPTSGQ-------SAFGQP------AFGEPAFGKPAS 544
S FGQPA T FG +S PT+ SAF QP A G A
Sbjct: 144 TGSLFGQPAAATSTTGFGGFGTSAPTTTNVFGSGTASAFAQPQATAVGASGVNTGTAVAK 203
Query: 545 SQPTSG----------------------------------------------QSAVGQPA 558
QPT G Q+ A
Sbjct: 204 YQPTIGTDTLMKSGQANSVNTKQHCITAMKEFEGKSLEELRLEDYMCGRKGPQAGNAPGA 263
Query: 559 FG------QPAFGEPAFGK--PASSQPTSG---------QSAFGQAAFG--PPT---FGK 596
FG QPA +PA G +++QP++G +S FG AFG P T FG
Sbjct: 264 FGFGAQVTQPA--QPASGGLFGSTAQPSTGLFGQTVTENKSMFGTTAFGQQPATNNAFG- 320
Query: 597 PASSQPTSGQPAFGQPA---FGQPVSDQSAP--SKPAFGKPTFGSTSFGTQSQTNTTSPL 651
A+ Q Q FG F P +D S P +KPAFG+ G + FG Q TS
Sbjct: 321 AATQQNNFLQKPFGATTTTPFAAPAADASNPFGAKPAFGQ---GGSLFG---QAPATSAA 374
Query: 652 SEEAETSSVFGTPSFGSTSFGIQGANV----------TSPFGTNTKISSESS-FG----- 695
+T++ FG FG+T+ Q + + S FG T S+ ++ FG
Sbjct: 375 PAFGQTNTGFG--GFGTTAGATQQSTLFGATPAADPNKSAFGLGTAASAATTGFGFGAPA 432
Query: 696 KSLFGTSQFGSDSAVTNPAPNSFATSAKLSSPFSAFATDQKTINPFETQTSDPFGHLNSK 755
S G FG+ A + AP +F ++ S+PFS F + T + G NS
Sbjct: 433 TSTAGGGLFGNKPATSFAAP-TFGATSTASTPFSNFGLNTST-------AATGGGLFNSG 484
Query: 756 KEDTKSFNFTGFG 768
+ F GFG
Sbjct: 485 LNKPATSGFGGFG 497
>Hs4826874 [YU] KOG3630 Nuclear pore complex Nup214/CAN component
Length = 2090
Score = 76.6 bits (187), Expect = 3e-13
Identities = 122/432 (28%), Positives = 164/432 (37%), Gaps = 73/432 (16%)
Query: 403 SGSSSMEKEKVTL---ISPQDTKNTITEVRKVPEQSSFFETTNSFAKGFSFTPKNMTDST 459
SG+++ V L +P T VP SSF S + T ++ +
Sbjct: 1551 SGTAASSTSLVALSAEATPATTGVPDARTEAVPPASSF-----SVPGQTAVTAAAISSAG 1605
Query: 460 NAESEGSQNPLLSSGSSPAFGKPAFGQATFGQVTSSQ-------ATPGQSAFGQ------ 506
E S P+ SS +S P+ A FG VTS A SAF Q
Sbjct: 1606 PVAVETSSTPIASSTTSIVAPGPSAEAAAFGTVTSGSSVFAQPPAASSSSAFNQLTNNTA 1665
Query: 507 -PAFGLPTFGKPVSSQPTSGQSAFGQP-------AFGEPAFGKPASSQPTSGQSAVGQPA 558
P FG+ +S + S FGQ A P S P G +A G
Sbjct: 1666 TAPSATPVFGQVAAS---TAPSLFGQQTGSTASTAAATPQVSSSGFSSPAFGTTAPG--V 1720
Query: 559 FGQPAFGEPA-FGKPASSQPTSGQSAFGQAAFGP-PTFGKPASSQPT------------- 603
FGQ FG+ + FG+ ASS + +F Q F P FG+PASS PT
Sbjct: 1721 FGQTTFGQASVFGQSASS--AASVFSFSQPGFSSVPAFGQPASSTPTSTSGSVFGAASST 1778
Query: 604 --SGQPAFGQ--PAFGQPVSDQSAPSKPAFGK-PTF---GSTSFGTQSQTNTTSPLSEEA 655
S +FGQ P G + QS + PAFG+ P F GS GT + T T +
Sbjct: 1779 SSSSSFSFGQSSPNTGGGLFGQS--NAPAFGQSPGFGQGGSVFGGTSAATTTAATSGFSF 1836
Query: 656 ETSSVFGTPSFGSTSFGIQGANVTSPFGTNTKISSESSFGKSLFGT-----SQFGSDSAV 710
+S FG+ + GS FG + FG + SS S FG G S G +
Sbjct: 1837 CQASGFGSSNTGSV-FGQAASTGGIVFGQQSSSSSGSVFGSGNTGRGGGFFSGLGGKPSQ 1895
Query: 711 TNPAPNSFATSAKLSSPFSAFATDQKTINPFETQTSDPFGHLNSKK--EDTKSFNFTGFG 768
N F+++ S F + AT T N F + FG S E + F+ G
Sbjct: 1896 DAANKNPFSSA---SGGFGSTAT-SNTSNLFGNSGAKTFGGFASSSFGEQKPTGTFSSGG 1951
Query: 769 ESISEANHSLPS 780
S++ S
Sbjct: 1952 GSVASQGFGFSS 1963
Score = 65.1 bits (157), Expect = 8e-10
Identities = 94/346 (27%), Positives = 134/346 (38%), Gaps = 83/346 (23%)
Query: 431 VPEQSSFFETTNSFAKGFSFTPKNMTDSTNAESEGSQNP-----LLSSGSSPAFGK-PAF 484
VP +T + G F + T S+++ S G +P L ++PAFG+ P F
Sbjct: 1753 VPAFGQPASSTPTSTSGSVFGAASSTSSSSSFSFGQSSPNTGGGLFGQSNAPAFGQSPGF 1812
Query: 485 GQ--ATFG---QVTSSQATPGQSAFGQPAFGLPTFGKPVSSQPTSGQSAFGQPAF----- 534
GQ + FG T++ AT G S FG G ++G FGQ +
Sbjct: 1813 GQGGSVFGGTSAATTTAATSGFSFCQASGFGSSNTGSVFGQAASTGGIVFGQQSSSSSGS 1872
Query: 535 ------------------GEPA---------------FGKPASSQPTSGQSAVGQPAFGQ 561
G+P+ FG A+S ++ G FG
Sbjct: 1873 VFGSGNTGRGGGFFSGLGGKPSQDAANKNPFSSASGGFGSTATSNTSNLFGNSGAKTFG- 1931
Query: 562 PAFGEPAFG--KPASSQPTSGQSA---------------FGQA-AFG-PPTFGKPASSQP 602
F +FG KP + + G S FG A FG PPTFG S
Sbjct: 1932 -GFASSSFGEQKPTGTFSSGGGSVASQGFGFSSPNKTGGFGAAPVFGSPPTFG---GSPG 1987
Query: 603 TSGQPAFGQ-PAFGQPVSDQSAPSKPAFGKPTFGSTS--FGTQSQTNTTSPLSEEAETSS 659
G PAFG PAF P+ FG+ T +++ FG S +NTTS + ++ +
Sbjct: 1988 FGGVPAFGSAPAFTSPLGSTGGK---VFGEGTAAASAGGFGFGSSSNTTSFGTLASQNAP 2044
Query: 660 VFGTPSFGSTSFGIQGANVTSPFGTNTKISSESSFGKSLFGTSQFG 705
FG+ S ++ FG Q + S FG+ T SFG + FG
Sbjct: 2045 TFGSLSQQTSGFGTQSSGF-SGFGSGT---GGFSFGSNNSSVQGFG 2086
>At3g10650 [YU] KOG0845 Nuclear pore complex Nup98 component (sc
Nup145/Nup100/Nup116)
Length = 1309
Score = 75.9 bits (185), Expect = 5e-13
Identities = 121/469 (25%), Positives = 186/469 (38%), Gaps = 78/469 (16%)
Query: 371 FHHSALQNSSFTLEPTKTQYVQSFEILSHKIESGSSSMEKEKVTLISPQDTKNTITEVRK 430
F A+Q S+ EPT ++++Q E S I SG + E++++ L P+ +
Sbjct: 627 FPIEAVQQSNMASEPT-SKFIQGTEKSS--ISSGKPTSEEKRIPLEEPKKPAAVFPNISF 683
Query: 431 VPEQSSFF------------ETTNSFAKGFSFTPKNMTDS--------TNAESEGSQNPL 470
P + E T+S A G S T+S + AES S P
Sbjct: 684 SPPATGLLNQNSGASADIKLEKTSSTAFGVSEAWAKPTESKKTFSNSASGAESSTSAAPT 743
Query: 471 LSSGSSPAFGKPAFGQATFGQVTSSQATPGQSAFGQPAFGLPTFGKPVSSQPTSGQSAFG 530
L+ A + G +TSS + P P+ V P++ QS F
Sbjct: 744 LNGSIFSAGANAVTPPPSNGSLTSSPSFP-------PSISNIPSDNSVGDMPSTVQS-FA 795
Query: 531 QPAFGEPAFGKPASSQPTSGQSAVGQPA-------FGQPA--FGEPAFGKPASSQPTSGQ 581
FGK +S ++ QS P FGQPA F PA + SS S +
Sbjct: 796 ATHNSSSIFGKLPTSNDSNSQSTSASPLSSTSPFKFGQPAAPFSAPAVSE--SSGQISKE 853
Query: 582 SAFGQAAFGPPT---FGKPASSQPTSGQPAFGQPAFGQPVSDQSAPSKPAFGKPTFGSTS 638
+ A FG + FG AS+ ++G FG ++ S+P F FGS+S
Sbjct: 854 TEVKNATFGNTSTFKFGGMASADQSTGI------VFGAKSAENK--SRPGF---VFGSSS 902
Query: 639 FGTQSQTNTTSPLSEEAETSSVFGTPSFGSTSFGIQGANVTSPFGTNTKISSESSF---G 695
S N ++ + E+S GS FG+ ++ +P +KIS+ S+ G
Sbjct: 903 VVGGSTLNPSTAAASAPESS--------GSLIFGVTSSS--TPGTETSKISASSAATNTG 952
Query: 696 KSLFGTSQFGSDSAVTNPAPNSFATSAKLSSPFSAFATDQKTINPFETQTSDPFGHLNSK 755
S+FGTS F S+ ++ A++ SS F A + ++Q S+ FG N++
Sbjct: 953 NSVFGTSSFAFTSSGSSMVGGVSASTG--SSVFGFNAVSSASATSSQSQASNLFGAGNAQ 1010
Query: 756 KEDTKSFNFTG-------FGESISEANHSLPSVTQDSLNSKEVSDSTIE 797
+T S T FG S S + L + + NS S E
Sbjct: 1011 TGNTGSGTTTSTQSIPFQFGSSPSAPSFGLSGNSSLASNSSPFGFSKSE 1059
Score = 62.8 bits (151), Expect = 4e-09
Identities = 93/311 (29%), Positives = 118/311 (37%), Gaps = 44/311 (14%)
Query: 441 TNSFAKGFSFTPKNMTDSTNAESEGSQNPLLSSGSSPAFGKPAFGQATFGQVTSSQAT-P 499
++S G + P S ES GS ++S S+P G T SS AT
Sbjct: 900 SSSVVGGSTLNPSTAAASA-PESSGSLIFGVTSSSTP-------GTETSKISASSAATNT 951
Query: 500 GQSAFGQPAFGLPTFGKPVSSQPTSGQSAFGQPAFGEPAFGKPASSQPTSGQSAVGQPAF 559
G S FG +F + G SS ++ G FG F +S+ TS QS F
Sbjct: 952 GNSVFGTSSFAFTSSG---SSMVGGVSASTGSSVFG---FNAVSSASATSSQSQASN-LF 1004
Query: 560 GQPAFGEPAFGKPASSQPTSGQSAFGQAAFGP--PTFGKPASSQPTSGQPAFG----QPA 613
G G G S TS QS Q P P+FG +S S FG +PA
Sbjct: 1005 GA---GNAQTGNTGSGTTTSTQSIPFQFGSSPSAPSFGLSGNSSLASNSSPFGFSKSEPA 1061
Query: 614 FGQPVS-------DQSAPSKPAFGKPTFGSTSFGTQSQTNTTSPLSEEAETSSVFGTPSF 666
VS + SA S P FG++ S N+ S TSS T SF
Sbjct: 1062 VFTSVSTPQLSSTNSSASSSSTMSSPLFGTSWQAPNSSPNSGPVFSSSFTTSSTPTTFSF 1121
Query: 667 GSTSFGIQGANVTSPFGTNTKISSESSFGKSLFGTSQFGSDSAVTNPAP---NSFATSAK 723
G +S + T FG +T + S +FG FGS T P NS S
Sbjct: 1122 GGSSAATVSSTTTPIFGASTNNTPSPS---PIFG---FGSTPPTTPQQPVFGNSGTPSQS 1175
Query: 724 L---SSPFSAF 731
L S+P AF
Sbjct: 1176 LFGNSTPGFAF 1186
>7293246 [YU] KOG4719 Nuclear pore complex protein
Length = 1836
Score = 75.9 bits (185), Expect = 5e-13
Identities = 106/383 (27%), Positives = 147/383 (37%), Gaps = 60/383 (15%)
Query: 468 NPLLSSGSSPAFGKPAFG----------QATFGQVTSSQATPGQSAFGQPAFGLPTFGKP 517
NP ++ +S A P F + + T+ T Q +FG FG GK
Sbjct: 1269 NPAATTANSAASSVPKFRFGFSHVKEVVKPSVETTTTPAPTSAQFSFG---FGQSNQGKD 1325
Query: 518 VS-SQPTSGQSAF--GQPAFGEP---AFGK-------PASSQPTSGQSAVGQPAFGQPAF 564
V+ S+ T F G EP +FG +S++ T+ A PA Q F
Sbjct: 1326 VADSKKTEAPKTFMFGVSKVEEPKTVSFGTGIKETTATSSTEATAPTPAAAAPAPVQFVF 1385
Query: 565 GEPAFGKPASSQPTSGQSAFGQAAFGPPTFGKPASSQ-------PTSGQPAFGQPAF--- 614
P ASS T+ + A G +FG P+SS TS PA +P F
Sbjct: 1386 KAPTTATTASSLTTTISTTSNAPALGGFSFGAPSSSSTVSSSTTSTSANPAAVKPMFSWS 1445
Query: 615 --GQPVSDQSAPSKPAFGKPTFGSTSFGTQSQTNTTSPLSEEA-ETSSVFGTPSFGSTSF 671
G VS S+ +P PT G FG S T TT+ S + + G +TS
Sbjct: 1446 GAGSAVSSTSSSQQPVAKAPTLG---FGVSSSTVTTTTTSTKVFAFTPASGLDPAAATSA 1502
Query: 672 GIQGANVTSPFGTNTKISSESSFGKSLFGTSQFGSDSAVTNPAPNSF----ATSAKLSSP 727
GA + FG+ +K ++ + G FG + + TNP+ +S ATS S+
Sbjct: 1503 PAAGAGFS--FGSQSKPATTQNTGTFFFGQPTAVAPATPTNPSVSSIFGAPATSTTASTS 1560
Query: 728 FSAFATDQKTINPF-----ETQTSDPFGHLNSKKEDTKSFNFTGFGESISEANHSLPSVT 782
SA T T N T T FG+ KK D T FG S + PS
Sbjct: 1561 VSA-TTSTSTANAIASSFAPTSTPQLFGNWGEKKTD-----LTTFGASSGSGTTTTPSFG 1614
Query: 783 QDSLNSKEVSDSTIENDQSEVPS 805
S N ++ + VPS
Sbjct: 1615 WSS-NGDAAKSNSAAVGSAAVPS 1636
Score = 68.9 bits (167), Expect = 6e-11
Identities = 89/334 (26%), Positives = 130/334 (38%), Gaps = 43/334 (12%)
Query: 452 PKNMTDSTNAESEGSQNPLLSSGSSPAFGKPA-----FGQATFGQVTSSQATPGQSAFGQ 506
PK ++ T + + + ++ +PA PA F T SS T +
Sbjct: 1348 PKTVSFGTGIKETTATSSTEATAPTPAAAAPAPVQFVFKAPTTATTASSLTTTISTTSNA 1407
Query: 507 PAFGLPTFGKPVSSQPTSGQ--SAFGQPAFGEPAFGKPASSQPTSGQSAVGQPAFGQPAF 564
PA G +FG P SS S S PA +P F + S S+ QP P
Sbjct: 1408 PALGGFSFGAPSSSSTVSSSTTSTSANPAAVKPMFSWSGAGSAVSSTSSSQQPVAKAPTL 1467
Query: 565 GEPAFGKPASSQPTSGQS----AFGQAAFGPP-------------TFG---KPASSQPTS 604
G FG +S+ T+ S AF A+ P +FG KPA++Q T
Sbjct: 1468 G---FGVSSSTVTTTTTSTKVFAFTPASGLDPAAATSAPAAGAGFSFGSQSKPATTQNT- 1523
Query: 605 GQPAFGQPAFGQPVSDQSAPSKPAFGKPTFGSTSFGTQSQTNTTSPLSEEAETSSVFGTP 664
G FGQP P + + FG P +T+ + S T +TS + A + + TP
Sbjct: 1524 GTFFFGQPTAVAPATPTNPSVSSIFGAPATSTTASTSVSATTSTSTANAIASSFAPTSTP 1583
Query: 665 ----SFGSTSFGIQGANVTSPFGTNTKISSESSFGKSLFGTSQFGSDSAVTNPAPNSFAT 720
++G + +S GT T SFG S G + + +AV + A S +
Sbjct: 1584 QLFGNWGEKKTDLTTFGASSGSGTTT----TPSFGWSSNGDAAKSNSAAVGSAAVPSSSA 1639
Query: 721 SAKLSSPF---SAFATDQKTINPFETQTSD-PFG 750
S + F S F + N T T+ PFG
Sbjct: 1640 STMATPIFGSSSMFGPSSSSNNTTSTSTTSLPFG 1673
Score = 67.8 bits (164), Expect = 1e-10
Identities = 101/361 (27%), Positives = 144/361 (38%), Gaps = 52/361 (14%)
Query: 435 SSFFETTNSFAKGFSFTPKNMTDSTNAESEGSQNPLLSSGSSPAFGKPAFGQATFGQVTS 494
SS TT + K F+FTP + D A S + S GS KPA Q T
Sbjct: 1473 SSTVTTTTTSTKVFAFTPASGLDPAAATSAPAAGAGFSFGSQ---SKPATTQNT------ 1523
Query: 495 SQATPGQSAFGQPAFGLPTFGKPVSSQPTSGQSAFGQPAFGEPAFGKPASSQPTSGQSAV 554
G FG PT P + S S FG PA A +++ TS +A+
Sbjct: 1524 ----------GTFFFGQPTAVAPATPTNPSVSSIFGAPATSTTASTSVSATTSTSTANAI 1573
Query: 555 GQ---PAFGQPAFGEPAFGKPASSQPTSGQSAFGQAAFGPPTFGKPASSQPT-SGQPAFG 610
P FG +G+ + T G S+ G P+FG ++ S A G
Sbjct: 1574 ASSFAPTSTPQLFGN--WGEKKTDLTTFGASS-GSGTTTTPSFGWSSNGDAAKSNSAAVG 1630
Query: 611 QPAFGQPVSDQSAPSKPAFGKPT-FG--STSFGTQSQTNTTSPLSEEAETSSVFGTPSFG 667
A P S S + P FG + FG S+S T S + T+ P A T++ TP+ G
Sbjct: 1631 SAAV--PSSSASTMATPIFGSSSMFGPSSSSNNTTSTSTTSLPFGSAATTAAT--TPAGG 1686
Query: 668 STS----FGIQG---ANVTSPFGTNTKISSESSFGKSLFGTSQ--------FGSDSAVTN 712
+ + FG G A V +P T T ++ ++ ++FG FGS S + +
Sbjct: 1687 NAALTGLFGNVGNSLAGVGAPVAT-TPAATAAAPLTNIFGNPTPVAAAAPVFGSGSTIPS 1745
Query: 713 PAPNSFATSAKLSSPF--SAFATDQKT-INPFETQTSDPFGHLNSKKEDTKSFNFTGFGE 769
+ A +A L++P AF T P + FG ++ SFNFTG
Sbjct: 1746 AGFGAPAAAAPLAAPALPGAFNFGGATAATPAASSAPFVFGSSTNEPLAKPSFNFTGSAA 1805
Query: 770 S 770
S
Sbjct: 1806 S 1806
>7299479 [R] KOG1721 FOG: Zn-finger
Length = 1659
Score = 74.7 bits (182), Expect = 1e-12
Identities = 90/301 (29%), Positives = 122/301 (39%), Gaps = 41/301 (13%)
Query: 460 NAESEGSQNPLLSSGSSPAFGKPAFGQATFGQVTSSQATPGQSAFG-----QPAFGLPTF 514
N + + + + S G + PAFG T VTS+ ATP + FG +PA P F
Sbjct: 1305 NNSAVANPSGVFSFGGTDKSAPPAFGSGTTS-VTSATATPTNNTFGFSTTQKPA--TPMF 1361
Query: 515 GKPVSSQPTSGQSAFGQP-AFGEPAFGKPASSQPTSGQS--AVGQPAFGQPAFGEPAFGK 571
G + Q ++ A +P G A P++S + G S AV P G FG
Sbjct: 1362 GSGSTQQSSTPAVAATKPFTLGGGAPTTPSASPASGGFSFSAVATKNTTAPTAGTNLFGS 1421
Query: 572 PASSQPTS----GQSAFGQAAFGPP----TFGKPASSQPTSGQPAFGQPAFGQPVSDQSA 623
PAS+ S G +A AA G P +F + ++ FG P G + S
Sbjct: 1422 PASASKPSFNFGGNTATQAAAAGSPAGGFSFATTTKKEDSASTNMFGSPNTGVVKPNFSF 1481
Query: 624 PSKPAFGKPTFG-----STSFGTQSQTNTTSPLSEEAETSSVFGTPSFGSTSFGIQGANV 678
S PTFG + + T + TN + P + A T + P G F AN
Sbjct: 1482 SSNNPTPAPTFGGFGAPAAAAPTATSTNQSKPFAFGASTPAAAPQPPLGGNLF----ANA 1537
Query: 679 TSPFGTNTKISSESSFG--KSLFGTS------QFGSDSA--VTNPAPNSFATSAKLSSPF 728
S TK S SFG KS GT+ FG SA + +P N +AK PF
Sbjct: 1538 VSATQNQTKPSGVFSFGAAKSTAGTTAGNAPFSFGGASAGGIASPPSNQGLNTAK---PF 1594
Query: 729 S 729
S
Sbjct: 1595 S 1595
Score = 54.3 bits (129), Expect = 1e-06
Identities = 107/413 (25%), Positives = 150/413 (35%), Gaps = 92/413 (22%)
Query: 416 ISPQDTKNTITEVRKVPEQSSFFETTNSF-AKGFSFTPKNMTDSTNAESEGSQNPLLSSG 474
++P T T+ V +F + SF A P +N S G+ ++G
Sbjct: 1086 VTPPKTTTTVAPTTTV--SLNFGQPMPSFGAADTGVKPMFSFGKSNNLSSGTPT---TNG 1140
Query: 475 SSPAFGKPA---FGQATFGQVTSSQATPGQSAFGQP---AFGLPTFGKPVSSQPT----- 523
S A KPA FG +T Q ++ TP + +P F P K +++P+
Sbjct: 1141 SDAAAAKPAVFSFGGSTT-QPAAAAPTPVFGSLSKPLGEGFASPGANKSETTKPSIFGNL 1199
Query: 524 ------SGQSAFGQPAFGEPAFGKPASSQPTSGQSAVGQPAFGQPAFGEPAFGKPASSQP 577
+ +S+ A KP T+ + G A +FG A K A P
Sbjct: 1200 DNGLGNAMKSSTNVAATTAAELPKPFGFAATTTAAGGGSTATNLFSFGGTATSKAAEPAP 1259
Query: 578 TSGQSAFG-------QAAFGPPTFGKPASSQPTSGQP---AFG----------QPAFGQP 617
S ++ FG AFG G S+ +P AFG F
Sbjct: 1260 ASQKNLFGLNATTTTPFAFGGAAAGAADKSENKDNKPIAFAFGAGNNSAVANPSGVFSFG 1319
Query: 618 VSDQSAPSKPAFGKPTFGSTSFGTQSQTNTTSPLSEEAETSSVFGTPSFGSTS---FGIQ 674
+D+SAP PAFG T TS T + TN T S T+ TP FGS S
Sbjct: 1320 GTDKSAP--PAFGSGTTSVTS-ATATPTNNTFGFS----TTQKPATPMFGSGSTQQSSTP 1372
Query: 675 GANVTSPF----GTNTKISSESSFGKSLF-------------GTSQFGSDSAVTNPA--- 714
T PF G T S+ + G F GT+ FGS ++ + P+
Sbjct: 1373 AVAATKPFTLGGGAPTTPSASPASGGFSFSAVATKNTTAPTAGTNLFGSPASASKPSFNF 1432
Query: 715 -PNSFATSAKLSSPFSAFATDQKTINPFETQTSDPFGHLNSKKEDTKSFNFTG 766
N+ +A SP F+ F T T KKED+ S N G
Sbjct: 1433 GGNTATQAAAAGSPAGGFS--------FATTT---------KKEDSASTNMFG 1468
>7291503 [YU] KOG3630 Nuclear pore complex Nup214/CAN component
Length = 1714
Score = 71.2 bits (173), Expect = 1e-11
Identities = 85/316 (26%), Positives = 117/316 (36%), Gaps = 40/316 (12%)
Query: 444 FAKGFSFTPKNMTDSTNAESEGSQNPLLSS---GSSPAFGKPAFGQATFGQVTSSQAT-- 498
F GF+ + +++P+ S+ GS P FG AT ++ A
Sbjct: 1356 FGGGFAVATSTAAPVASPFQSAAKSPVSSANIFGSIPKAETSVFGGATTAPSNTTAAATP 1415
Query: 499 --PGQSAFGQPAFGLPT-FGKPVSSQPTSGQSAFGQPAFGEPAFGKPASSQPTSGQSAVG 555
P F A P+ FG P + P SG + FGQ A FG+PA + SG S G
Sbjct: 1416 DAPPAGLFASAAISNPSPFGSPTTRAPASGGNIFGQ-AVKPSVFGQPAQAGD-SGGSIFG 1473
Query: 556 QPAFGQPAFGEPAFGKPASSQPTSGQSAFGQAAFGPPTFGKPASSQPTSGQPAFGQP--- 612
+ P FG + +A + FG FG+ +++ P +G F P
Sbjct: 1474 GGSASTPFGSSSIFGGGNTQGAVGAPAAGSTSIFGQKVFGQSSAAAPAAGGNIFSNPVGS 1533
Query: 613 -------AFGQPVSDQSAPSKPAFGKPTF--GSTSFGTQSQTNTTSPLSEEAETSSVFGT 663
G + A + PA G F GS+S G S T TT G
Sbjct: 1534 PQASPFGGGGNSIFGSPATAPPASGGSIFGGGSSSGGFGSFTQTTPAQGGFGGGFGQGGG 1593
Query: 664 PSFGSTSFGIQGA---NVTSP--FGTNTKISSESSFGKS-------LFGTSQ----FGSD 707
S T FG A T+P FG +FG S FG+ + FG
Sbjct: 1594 GSVAQTGFGSPQAPQQQTTTPGGFGAKPVFGGSPAFGASPTFGGGATFGSPKGFGGFGGA 1653
Query: 708 SAVTNPAPNSFATSAK 723
S V +P P F +AK
Sbjct: 1654 SPVASPPP--FGAAAK 1667
Score = 60.5 bits (145), Expect = 2e-08
Identities = 61/226 (26%), Positives = 80/226 (34%), Gaps = 21/226 (9%)
Query: 474 GSSPAFGKPAFGQATFGQVTSSQATPGQSAFGQPAFGLPTFGKPVSSQPTSGQSAFGQPA 533
GSS FG A S + GQ FGQ + P G + S P A
Sbjct: 1482 GSSSIFGGGNTQGAVGAPAAGSTSIFGQKVFGQSSAAAPAAGGNIFSNPVGSPQASPFGG 1541
Query: 534 FGEPAFGKPASSQPTSGQSAVG----QPAFGQPAFGEPAFGKPASSQPTSGQSAFGQAAF 589
G FG PA++ P SG S G FG PA G G + Q F
Sbjct: 1542 GGNSIFGSPATAPPASGGSIFGGGSSSGGFGSFTQTTPAQGGFGGGFGQGGGGSVAQTGF 1601
Query: 590 GPPTFGKPASSQP--TSGQPAF-GQPAFGQPVSDQSAPSKPAF-GKPTFGST----SFGT 641
G P + ++ P +P F G PAFG + P F G TFGS FG
Sbjct: 1602 GSPQAPQQQTTTPGGFGAKPVFGGSPAFG---------ASPTFGGGATFGSPKGFGGFGG 1652
Query: 642 QSQTNTTSPLSEEAETSSVFGTPSFGSTSFGIQGANVTSPFGTNTK 687
S + P A+ + + G G+ N+ +N +
Sbjct: 1653 ASPVASPPPFGAAAKPAQGNIFETLGGQESGLSFGNLAQTGNSNAQ 1698
Score = 53.5 bits (127), Expect = 2e-06
Identities = 87/337 (25%), Positives = 128/337 (37%), Gaps = 58/337 (17%)
Query: 309 DAACAILPINPETDNDTQPIGMALDVFSSGTVYEPCSGVEAADNLPILYVLTNLGELFCW 368
D A +P++ + D +T P+G A D + T ++ + +P+++VL++ GEL +
Sbjct: 329 DEARIEMPLSEDKD-ETFPLGFAFD---TSTTHQLTINEKKLQTMPMVHVLSSDGELLSF 384
Query: 369 ALFHHSALQNSSFTLEPTKTQYVQSFEILSHKIESGSSSMEKEKVTLISPQDTKNTITEV 428
+ S + P F+ L+ + +S E++ SP
Sbjct: 385 NFLNVLPTAVSVCSPPPPVADTSGQFKPLNMLL---ASEEEEQPAWAASPS--------- 432
Query: 429 RKVPEQSSFFETTNSFAKGFSFTPKNMTDSTNAESEGSQNPLLSSGSSPAFGKPAFGQAT 488
K P + + SFA FTP +T ST A S+ Q P L SG A K Q +
Sbjct: 433 -KAPAATPAASSDISFA----FTPNTVT-STPAPSKDKQ-PSLFSGFGAAAAKAPAPQLS 485
Query: 489 FGQVTSSQATPGQSAFGQPAFGLPTFGKPVSSQPTSGQ-------------SAFGQPAFG 535
FG +S +FG PT + P G SA G AFG
Sbjct: 486 FGTAPTSSPV---------SFGAPTTNAAKPTTPFGGFGTQATTTAMGSMFSASGANAFG 536
Query: 536 EPAFGKPASSQPTSGQSAVGQPAFGQPAFGEPAFGKPASSQPTSGQSAFGQAAFGPPTFG 595
A KPA + T +A G PA PA KP + P + P
Sbjct: 537 GMALNKPAIASVTPRTAAPGSTVPATPA-SAPA-NKPLYTVPLT----------FTPVDT 584
Query: 596 KPASSQPTSGQPAFGQPAFGQP-VSDQSAPSKPAFGK 631
KPA+S P +P +P + D A AF K
Sbjct: 585 KPATSAPPQIADESLKPDDTEPIIKDMIALQIEAFSK 621
>SPAC26A3.15c [Y] KOG2196 Nuclear porin
Length = 598
Score = 70.5 bits (171), Expect = 2e-11
Identities = 109/376 (28%), Positives = 158/376 (41%), Gaps = 82/376 (21%)
Query: 442 NSFAKGFSFTPKNMTDSTNAE--SEGSQNPLLSSGSSPAFG-----KPAFGQATFGQVTS 494
++F+ G + T N T+++ + S GS N ++G+ P FG A + T+
Sbjct: 66 STFSFGKAATTGNSTNASTSSPFSFGSTNTNNTAGAKPLFGGLGSTGSANSTGDKSKNTA 125
Query: 495 SQAT------PGQSAFGQPAFGLP----TFGKPVSSQPT------SGQSAFGQP-AFGEP 537
S AT P S F FG FGKP S+ T S S FG+P A G
Sbjct: 126 SSATGAATTNPSGSTFN---FGSSNNSFNFGKPASTTNTTTPAAASTGSLFGKPAATGTT 182
Query: 538 AFGKPASSQPTSGQSAVGQPAFGQPA-FGEP-------------AFGKPA-SSQPTSGQS 582
+ PASS T+ + G +FG+PA G +FGKPA +S P S +
Sbjct: 183 SNAPPASSTSTTPATGSGGFSFGKPASLGSTNNASTSTTANSGFSFGKPATTSAPGSNTT 242
Query: 583 AFGQAAFGPPTFGKPASSQ----PTSGQPAFGQPAFGQPVS---------DQSAPSKPAF 629
++ KPA+S PT+G +FG+PA GQ S SA + +F
Sbjct: 243 VTPSSSITGTNDSKPAASNTGSAPTTGF-SFGKPA-GQAASTATDKGTTTTSSAGTGFSF 300
Query: 630 GKP-TFGSTSFGTQSQTNTTSPLSEEAETSSVFGTPSFGSTSFGIQGANVTS----PFGT 684
GKP T T+ T + T P + + F SFG+TS + + T+ P
Sbjct: 301 GKPATTEDTNKPTAPNSAFTKPATSTGDNKPTF---SFGNTSKPTENTSTTATSAPPLSN 357
Query: 685 NTK-------ISSESSFGKSLFGTSQ--------FGSDSAVTNPAPNSFATSAKLSSPFS 729
NTK SS SFGK T+ FG+ A + P + A++ P S
Sbjct: 358 NTKPAEGANQTSSGFSFGKPATDTTTSTSKTGPLFGNKPADPSAKPGATASTTPSEPPPS 417
Query: 730 AF--ATDQKTINPFET 743
+ T Q+ +N + T
Sbjct: 418 SIKHKTLQEILNKWST 433
Score = 55.1 bits (131), Expect = 8e-07
Identities = 65/222 (29%), Positives = 94/222 (42%), Gaps = 48/222 (21%)
Query: 440 TTNSFAKGFSFTPKNMTDSTNAESEGSQNPLLSSGSSP----AFGKPAFGQATFGQVTSS 495
TT++ + TP + TN + N +GS+P +FGKPA GQ S+
Sbjct: 233 TTSAPGSNTTVTPSSSITGTNDSKPAASN----TGSAPTTGFSFGKPA------GQAAST 282
Query: 496 QATPGQSAFGQPAFGLPTFGKPVSSQ----PTSGQSAFGQPAF----GEPAFGKPASSQP 547
G + G +FGKP +++ PT+ SAF +PA +P F +S+P
Sbjct: 283 ATDKGTTTTSSAGTGF-SFGKPATTEDTNKPTAPNSAFTKPATSTGDNKPTFSFGNTSKP 341
Query: 548 TSGQSAVGQPAFGQPAFGEPAFGKPASSQPTSGQSAFGQAAFGPPTFGKPASSQPTSGQP 607
T S A +PA G ++Q +SG S FGKPA+ TS
Sbjct: 342 TENTSTTATSAPPLSNNTKPAEG---ANQTSSGFS-----------FGKPATDTTTSTSK 387
Query: 608 AFGQPAFGQPVSDQSAPSKPAFGKPTFGSTSFGTQSQTNTTS 649
P FG +D SA KP G+T+ T S+ +S
Sbjct: 388 T--GPLFGNKPADPSA--KP-------GATASTTPSEPPPSS 418
Score = 53.1 bits (126), Expect = 3e-06
Identities = 102/438 (23%), Positives = 166/438 (37%), Gaps = 63/438 (14%)
Query: 466 SQNPLLSSGSSPAFGKPAF------GQATFGQVTSSQATPGQSAFGQPAFGLPTFGKPVS 519
S NP + S +FGKPA G AT T ++ P+ GL FG +
Sbjct: 2 SFNPGNNQNSGFSFGKPAQPNSAAQGAATPAATGLFGNTNNNTSSTAPSGGL--FGSNNA 59
Query: 520 SQPTSGQSAFGQPAFGEPAFGKPASSQPTSGQSAVGQPAFGQPAFGEPAFGKPASSQPTS 579
S TS S F +FG+ A +++ TS + G A +P FG S+ S
Sbjct: 60 SN-TSAPSTF---SFGKAATTGNSTNASTSSPFSFGSTNTNNTAGAKPLFGGLGSTG--S 113
Query: 580 GQSAFGQAAFGPPTFGKPASSQPTSGQPAFGQPA----FGQPVSDQSAPSKPAFGKPTFG 635
S ++ + A++ P+ FG FG+P S + + P
Sbjct: 114 ANSTGDKSKNTASSATGAATTNPSGSTFNFGSSNNSFNFGKPASTTNTTT------PAAA 167
Query: 636 STS--FGTQSQTNTTSPLSEEAETSSVFGTPSFGSTSFGIQGA-NVTSPFGTNTKISSES 692
ST FG + T TTS + TS+ T S G SFG + T+ T+T +S
Sbjct: 168 STGSLFGKPAATGTTSNAPPASSTSTTPATGS-GGFSFGKPASLGSTNNASTSTTANSGF 226
Query: 693 SFGK-----------------SLFGTSQFGSDSAVTNPAPNSFATSAKLSSPFSAFATDQ 735
SFGK S+ GT+ ++ T AP + + K + ++ ATD+
Sbjct: 227 SFGKPATTSAPGSNTTVTPSSSITGTNDSKPAASNTGSAPTTGFSFGKPAGQAASTATDK 286
Query: 736 KTINPFETQTSDPFGHLNSKKEDTK------SFNFTGFGESISEANHSLPSVTQDSLNSK 789
T T FG + ++ K +F ++ S + ++ + N+
Sbjct: 287 GTTTTSSAGTGFSFGKPATTEDTNKPTAPNSAFTKPATSTGDNKPTFSFGNTSKPTENTS 346
Query: 790 EVSDSTIENDQSEVPSP-ANXXXXXXXXXXXXXNIVSSTDESDSLYGEDREIYDNDRSDI 848
+ S + P+ AN + +ST ++ L+G N +D
Sbjct: 347 TTATSAPPLSNNTKPAEGANQTSSGFSFGKPATDTTTSTSKTGPLFG-------NKPAD- 398
Query: 849 HIEASSKPSSTVLNSNSD 866
S+KP +T + S+
Sbjct: 399 ---PSAKPGATASTTPSE 413
>SPAC1486.05 [YU] KOG0845 Nuclear pore complex Nup98 component (sc
Nup145/Nup100/Nup116)
Length = 1778
Score = 70.5 bits (171), Expect = 2e-11
Identities = 98/377 (25%), Positives = 131/377 (33%), Gaps = 72/377 (19%)
Query: 446 KGFSFTPKNMTDSTNAESEG---SQNPLLSSGSSPAFGKPA--FGQ---------ATFGQ 491
+ +SF + D G S N + GS+PAFG FGQ FG
Sbjct: 209 RSYSFEELRLQDYNQGRRFGNASSTNTTSAFGSTPAFGASTTPFGQNLSGTTNNATPFGT 268
Query: 492 VTSSQATPGQSAFGQ-PAFGLPT----------------FGKPVSSQPTSGQSAFGQPAF 534
++ TPG FG AFG T FG+ ++ T FG F
Sbjct: 269 SNATNTTPGSGLFGGGSAFGSNTTNTGFGSGTNNASGGLFGQNNNTTSTPSTGLFGGSTF 328
Query: 535 GE--PAFGKPASSQPTSGQSAVGQPAFGQPAFGEPAFGKPASSQPTSGQSAFGQAAFGPP 592
+ PAF S+ T+ G FG + Q T G FG AA G
Sbjct: 329 NQQKPAFSGFGSTTNTTNTGT------GTGLFGSNNATNTGTGQTTGG--LFGGAATGTG 380
Query: 593 T--------FGKPASSQPTSGQPAFGQPAFG---QPVSDQSAPSKPAFGKPTFGSTSFGT 641
T FG ++QP SG G FG ++ +AP+ FG + SFG
Sbjct: 381 TGFGSSTGGFGSNTNNQPNSGTMGTGLFGFGANNNTANNNTAPTS-TFGGNNSSNFSFGA 439
Query: 642 QSQTNTTSPLSEEAETSSVFGTPSFGSTSFGIQGANVTSPFGTNTKISSESSFGKSLFGT 701
+ T T++ TP+ G SFG N P +T ++ G LFG
Sbjct: 440 NNNAATKPSGFGFGSTTT---TPASGGFSFGQNANNAPKPAFGSTATTAPKPAGTGLFGG 496
Query: 702 SQFGSDSAVTNPAPNSFATSAKLSSPFSAFATDQKTINPFETQTSDPFGHLNSKKEDTKS 761
G++ TN A N+ T L T S+ FG NS T
Sbjct: 497 LGAGAN---TNTATNATGTGGSL-------------FGNANTAGSNMFGSANSSTPGTGL 540
Query: 762 FNFTGFGESISEANHSL 778
F T + S L
Sbjct: 541 FGSTQTNNATSNTGTGL 557
Score = 64.7 bits (156), Expect = 1e-09
Identities = 74/289 (25%), Positives = 114/289 (38%), Gaps = 48/289 (16%)
Query: 435 SSFFETTNSFAKGFSFTPKNMTDSTNAESEGSQNPLLSSGSSPA--FGKPAFGQATFGQV 492
+ F +T F + P + T T G+ N ++ ++P FG +FG
Sbjct: 381 TGFGSSTGGFGSNTNNQPNSGTMGTGLFGFGANNNTANNNTAPTSTFGGNNSSNFSFGAN 440
Query: 493 TSSQATPGQSAFGQPAFGLPTFGKPVSSQPTSGQSAFGQPAFG--EPAFGKPASSQPTS- 549
++ P FG ++ P SG +FGQ A +PAFG A++ P
Sbjct: 441 NNAATKPSGFGFGS-----------TTTTPASGGFSFGQNANNAPKPAFGSTATTAPKPA 489
Query: 550 --------GQSAVGQPAFGQPAFGEPAFGKPASSQPTSGQSAFGQAAFGPPTFGKPASSQ 601
G A A G FG + T+G + FG A P G S+Q
Sbjct: 490 GTGLFGGLGAGANTNTATNATGTGGSLFG----NANTAGSNMFGSANSSTPGTGLFGSTQ 545
Query: 602 PTSGQPAFGQPAFGQPVSDQSAPSKPAFGKPT------FGSTSFGTQSQTNTTSPL---- 651
+ G FG ++ + F KP+ FG+T+ Q + TTS L
Sbjct: 546 TNNATSNTGTGLFGSNNANTTNTGGSLFNKPSTTTGGLFGNTT--AQQPSTTTSGLFGAS 603
Query: 652 --SEEAETSSVFGTPSFGSTSFG-----IQGANVTSPFGTNTKISSESS 693
+ +A+TS+ FGT FG + G +Q + +P+G N SS +S
Sbjct: 604 NTNNQAQTSN-FGTGLFGGSQAGQQQQPLQASIDQNPYGNNPLFSSTTS 651
Score = 59.3 bits (142), Expect = 4e-08
Identities = 94/342 (27%), Positives = 134/342 (38%), Gaps = 54/342 (15%)
Query: 465 GSQNPLLSSGSSPAFGKPAFGQATFGQVTSSQATPGQSAFGQPAFGLPTFGKPVSSQPTS 524
G N G + AFG+ Q T G S+ TPG + FG FG+ ++QP
Sbjct: 3 GQNNSSGFGGGTGAFGQN--NQQTGGLFGSNSNTPGNTLFGSQNTSTTGFGQN-TTQPLF 59
Query: 525 GQSAFGQPAFGEPAFGKPASSQPTSGQS---AVGQPAFGQPAFGEPAFGKPASSQPTSGQ 581
G + G FG ++ T G + G FGQ PAFG ++ SG
Sbjct: 60 GSNTNG------GLFGNRNNTTTTGGTGFGMSSGTGMFGQS--NTPAFGGTNNATNPSGG 111
Query: 582 SAFG-QAAFGPPTFGKPASSQPTSGQPAFGQPAFGQPV--SDQSAPSKPAFGKPTFGSTS 638
FG A G S +G FG G + S + + AFG F S++
Sbjct: 112 GLFGSNTANNNANTGTSFSFGSNAGSTGFGSQGTGGGLFGSSTTPATTNAFGTSGFVSSN 171
Query: 639 FGTQSQT-----NTTSPLSEEAETSSVFGT----PSFGSTSF---------------GIQ 674
+ T TS + +SVF + P++ S SF
Sbjct: 172 ANAVNGTANPPYAVTSEKDPQTNGTSVFQSITCMPAYRSYSFEELRLQDYNQGRRFGNAS 231
Query: 675 GANVTSPFGTNTKI-SSESSFGKSLFGTSQ----FGSDSAVTNPAPNSFATSAKLSSPFS 729
N TS FG+ +S + FG++L GT+ FG+ +A TN P S L S
Sbjct: 232 STNTTSAFGSTPAFGASTTPFGQNLSGTTNNATPFGTSNA-TNTTPGS-----GLFGGGS 285
Query: 730 AFATDQKTINPFETQTSDPFGHLNSKKEDTKSFNFTG-FGES 770
AF ++ T F + T++ G L + +T S TG FG S
Sbjct: 286 AFGSN-TTNTGFGSGTNNASGGLFGQNNNTTSTPSTGLFGGS 326
Score = 58.2 bits (139), Expect = 1e-07
Identities = 76/305 (24%), Positives = 122/305 (39%), Gaps = 37/305 (12%)
Query: 489 FGQVTSSQATPGQSAFGQPAFGLPTFGKPVSSQPTSGQSAFGQPAFGEPAFGKPASSQPT 548
FGQ SS G AFGQ ++Q T G G FG +S
Sbjct: 2 FGQNNSSGFGGGTGAFGQ------------NNQQTGGLFGSNSNTPGNTLFGSQNTSTTG 49
Query: 549 SGQSAVGQPAFGQPAFGEPAFGKPASSQPTSGQSAFGQAAFGPPTFGK---PASSQPTSG 605
GQ+ QP FG G FG ++ T+G + FG ++ G FG+ PA +
Sbjct: 50 FGQNTT-QPLFGSNTNGG-LFGN-RNNTTTTGGTGFGMSS-GTGMFGQSNTPAFGGTNNA 105
Query: 606 QPAFGQPAFGQPVSDQSAPSKPAFG-KPTFGSTSFGTQSQTNTTSPLSEEAETSSVFGTP 664
G FG ++ +A + +F GST FG+Q S T++ FGT
Sbjct: 106 TNPSGGGLFGSNTANNNANTGTSFSFGSNAGSTGFGSQGTGGGLFGSSTTPATTNAFGTS 165
Query: 665 SFGSTSFGIQGANVTSPFGTNTKISSESSFGKSLFGTSQFGSDSAVTNPAPNSFATSAKL 724
F S++ P+ ++ +++ GTS F S + + PA S++
Sbjct: 166 GFVSSNANAVNGTANPPYAVTSEKDPQTN------GTSVFQSITCM--PAYRSYSFEELR 217
Query: 725 SSPFSAFATDQKTINPFETQTSDPFGHLNSKKEDTKSFNFTGFGESIS-EANHSLPSVTQ 783
++ ++ N T T+ FG + T T FG+++S N++ P T
Sbjct: 218 LQDYN---QGRRFGNASSTNTTSAFGSTPAFGAST-----TPFGQNLSGTTNNATPFGTS 269
Query: 784 DSLNS 788
++ N+
Sbjct: 270 NATNT 274
Score = 58.2 bits (139), Expect = 1e-07
Identities = 102/389 (26%), Positives = 137/389 (34%), Gaps = 62/389 (15%)
Query: 440 TTNSFAKGFSFTP-KNMTDSTNAESEGSQNPLLSSGSSPAFGK-PAFGQATFGQVTSSQA 497
TT + GF + M +N + G N + FG A A G S +
Sbjct: 74 TTTTGGTGFGMSSGTGMFGQSNTPAFGGTNNATNPSGGGLFGSNTANNNANTGTSFSFGS 133
Query: 498 TPGQSAFGQPAFGLPTFGKPVSSQPTSGQSAFGQPAF-----------GEPAFGKPASSQ 546
G + FG G FG SS + +AFG F P + +
Sbjct: 134 NAGSTGFGSQGTGGGLFG---SSTTPATTNAFGTSGFVSSNANAVNGTANPPYAVTSEKD 190
Query: 547 PTSGQSAVGQPAFGQPAFGEPAFGKPASSQPTSGQSAFGQAAFGPPTFGKPASSQPTSGQ 606
P + ++V Q PA+ +F + G+ FG +S+ TS
Sbjct: 191 PQTNGTSVFQSITCMPAYRSYSFEELRLQDYNQGR-----------RFGNASSTNTTS-- 237
Query: 607 PAFGQ-PAFGQPVSDQSAPSKPAFGKPTFGSTSFGTQSQTNTTSPLSEEAETSSVFGTPS 665
AFG PAFG + P T +T FGT + TNTT P S S FG+ +
Sbjct: 238 -AFGSTPAFGA----STTPFGQNLSGTTNNATPFGTSNATNTT-PGSGLFGGGSAFGS-N 290
Query: 666 FGSTSFGIQGANVTSP--FGTNTKISSESSFGKSLFGTSQFGSD-------SAVTNPAPN 716
+T FG G N S FG N +S S G LFG S F + TN
Sbjct: 291 TTNTGFG-SGTNNASGGLFGQNNNTTSTPSTG--LFGGSTFNQQKPAFSGFGSTTNTTNT 347
Query: 717 SFATSAKLSSPFSAFATDQKTINPF---ETQTSDPFGHL---------NSKKEDTKSFNF 764
T S+ + T Q T F T T FG N T
Sbjct: 348 GTGTGLFGSNNATNTGTGQTTGGLFGGAATGTGTGFGSSTGGFGSNTNNQPNSGTMGTGL 407
Query: 765 TGFGESISEA-NHSLPSVTQDSLNSKEVS 792
GFG + + A N++ P+ T NS S
Sbjct: 408 FGFGANNNTANNNTAPTSTFGGNNSSNFS 436
>CE05198 [YU] KOG3630 Nuclear pore complex Nup214/CAN component
Length = 1390
Score = 67.8 bits (164), Expect = 1e-10
Identities = 97/408 (23%), Positives = 150/408 (35%), Gaps = 65/408 (15%)
Query: 375 ALQNSSFTLEPTKTQYVQS-FEILSHKIESGSSSMEKEKVTLISPQDTKNTITEVRKVP- 432
+L NSS ++ P + + S E L+ E E E + ++ K+ T+V++ P
Sbjct: 974 SLINSSLSISPQEIEKASSKVETLNKTEEVKDEKSENEVTPDLKSEEPKSLETKVKEEPK 1033
Query: 433 ----------EQSSFFETTNSFAKGFSFTPKNMTDSTNAESEGSQNPLLSSGSSPAFGKP 482
E S + T SF+ + TPK+ + +++ G + SS +S
Sbjct: 1034 PAVQTPVKEEETGSNIQKTPSFSFNSTTTPKSTSSTSSIFGGGLKTQTPSSSNSTNI--- 1090
Query: 483 AFGQATFGQVTSSQATPGQSAFGQPAFGLPTFGKPVSSQPTSGQSAFGQPAFGEPAFGKP 542
FG T++ ATP ++ FG G +S P +FGQ P
Sbjct: 1091 ------FGARTTTTATPTPASNTSSIFG---GGSKAASSPFG---SFGQAGCQPAKTSNP 1138
Query: 543 ASSQP-------TSGQSAVGQPAFGQPAFGEPAFGKPASSQPTSGQSAFGQAAFGPPTFG 595
A+S T SA +PA G +FG AS++P+S FG + P
Sbjct: 1139 ATSTASVTFSFNTGATSASAKPA------GFGSFGAGASAKPSS---VFGGSVTAPTVPN 1189
Query: 596 KPASSQPTSGQPAFGQPAFGQPVSDQSAPSKPAFGKPTFGSTSFGTQSQTNT-------T 648
+ S G F + + + P TS GT + +++
Sbjct: 1190 VDDGMEDDSMANGGGSGGFMSGLGNARTSNTSGGNNPFAPKTSTGTSASSSSWLFGGGGN 1249
Query: 649 SPLSEEAETSSVFGTPSFGSTSFGIQGANVTSPFGTNTKISSESSFGKSLFG-------- 700
++ + S F T + +S FG K S+ +FG FG
Sbjct: 1250 QQQQQQQKPSFSFNTAGSSAQQASAPATGTSSVFGGAPKFGSQPAFGAKPFGGGANAGLS 1309
Query: 701 --TSQFG--SDSAVTNPAPNSFATSA---KLSSPFSAFATDQKTINPF 741
S FG + S NPA FA A K SS F AT Q + F
Sbjct: 1310 KNASIFGGATSSTTNNPATGGFAQFASGQKTSSLFGGGATPQTNTSIF 1357
>CE28184 [YU] KOG0845 Nuclear pore complex Nup98 component (sc
Nup145/Nup100/Nup116)
Length = 1652
Score = 65.5 bits (158), Expect = 6e-10
Identities = 83/311 (26%), Positives = 121/311 (38%), Gaps = 63/311 (20%)
Query: 473 SGSSPAFGKPAFGQATFGQVTSSQATPGQSAFGQPAFGLPTFGKPVSSQPTSGQSAFGQP 532
S S +FG + G FGQ ++Q + FGQPA T G ++Q S FG
Sbjct: 7 SFGSSSFGGGSSGSGLFGQ--NNQNNQNKGLFGQPANNSGTTGLFGAAQNKPAGSIFGAA 64
Query: 533 AFGEPAFGKPASSQPTSGQSAV---GQPAFGQPAFGEPAFGKPASSQ-------PTSGQS 582
+ FG P QP + QS++ GQ + FG + PASS T S
Sbjct: 65 SNTSSIFGSP--QQPQNNQSSLFGGGQNNANRSIFGSTSSAAPASSSLFGNNANNTGTSS 122
Query: 583 AFGQ--------AAFGPPTF-GKPASSQPTSGQPAFGQPAFGQPVSDQ----SAPSK--- 626
FG FG T G +P + Q +S + SA SK
Sbjct: 123 IFGSNNNAPSGGGLFGASTVSGTTVKFEPPISSDTMMRNGTTQTISTKHMCISAMSKYDG 182
Query: 627 -----------------PAFGKPTFGSTSFGTQSQTNTTSPLSEEAETSSVFGTPSFGST 669
P G + G FG + TN +A +S +FG+ +
Sbjct: 183 KSIEELRVEDYIANRKAPGTGTTSTGGGLFGASNTTN-------QAGSSGLFGSSNAQQK 235
Query: 670 SFGIQGANVTSPFGTNTKISSESSFGKSLFGTSQFGSDSAVTNPAPNS-FATSAKLSSPF 728
+ GA+ +SPFG NT ++ G+S FG+++A T+ A S F SS F
Sbjct: 236 TSLFGGASTSSPFGGNTSTANT--------GSSLFGNNNANTSAASGSLFGAKPAGSSLF 287
Query: 729 SAFATDQKTIN 739
+ ++ +IN
Sbjct: 288 GSTGKNKSSIN 298
>CE28183 [YU] KOG0845 Nuclear pore complex Nup98 component (sc
Nup145/Nup100/Nup116)
Length = 955
Score = 65.5 bits (158), Expect = 6e-10
Identities = 83/311 (26%), Positives = 121/311 (38%), Gaps = 63/311 (20%)
Query: 473 SGSSPAFGKPAFGQATFGQVTSSQATPGQSAFGQPAFGLPTFGKPVSSQPTSGQSAFGQP 532
S S +FG + G FGQ ++Q + FGQPA T G ++Q S FG
Sbjct: 7 SFGSSSFGGGSSGSGLFGQ--NNQNNQNKGLFGQPANNSGTTGLFGAAQNKPAGSIFGAA 64
Query: 533 AFGEPAFGKPASSQPTSGQSAV---GQPAFGQPAFGEPAFGKPASSQ-------PTSGQS 582
+ FG P QP + QS++ GQ + FG + PASS T S
Sbjct: 65 SNTSSIFGSP--QQPQNNQSSLFGGGQNNANRSIFGSTSSAAPASSSLFGNNANNTGTSS 122
Query: 583 AFGQ--------AAFGPPTF-GKPASSQPTSGQPAFGQPAFGQPVSDQ----SAPSK--- 626
FG FG T G +P + Q +S + SA SK
Sbjct: 123 IFGSNNNAPSGGGLFGASTVSGTTVKFEPPISSDTMMRNGTTQTISTKHMCISAMSKYDG 182
Query: 627 -----------------PAFGKPTFGSTSFGTQSQTNTTSPLSEEAETSSVFGTPSFGST 669
P G + G FG + TN +A +S +FG+ +
Sbjct: 183 KSIEELRVEDYIANRKAPGTGTTSTGGGLFGASNTTN-------QAGSSGLFGSSNAQQK 235
Query: 670 SFGIQGANVTSPFGTNTKISSESSFGKSLFGTSQFGSDSAVTNPAPNS-FATSAKLSSPF 728
+ GA+ +SPFG NT ++ G+S FG+++A T+ A S F SS F
Sbjct: 236 TSLFGGASTSSPFGGNTSTANT--------GSSLFGNNNANTSAASGSLFGAKPAGSSLF 287
Query: 729 SAFATDQKTIN 739
+ ++ +IN
Sbjct: 288 GSTGKNKSSIN 298
>YJL041w_1 [YU] KOG4719 Nuclear pore complex protein
Length = 590
Score = 64.7 bits (156), Expect = 1e-09
Identities = 107/404 (26%), Positives = 150/404 (36%), Gaps = 69/404 (17%)
Query: 438 FETTNSFAKGFSF-TPKNMTDSTNAESEGSQNPLLSSGSSPAFGK--------------P 482
F T FSF T N +++TN S + S+ F P
Sbjct: 3 FNTPQQNKTPFSFGTANNNSNTTNQNSSTGAGAFGTGQSTFGFNNSAPNNTNNANSSITP 62
Query: 483 AFGQATFGQVTSSQATPGQSAFGQPAFGLPTFGKPVSSQPTSGQSAFGQPAFGEPAFGKP 542
AFG G + P + FG TFG + G S+ Q A G
Sbjct: 63 AFGSNNTGNTAFGNSNPTSNVFGSNNSTTNTFGSNSAGTSLFGSSSAQQTKSNGTAGGNT 122
Query: 543 ASSQPTSGQSAVGQPAFGQPAFGEPAFGKPASSQPTSGQSAFGQAAFGPPTFGKPASSQP 602
S S +PAFG FG ++ P S+ G A FG A+
Sbjct: 123 FGSSSLFNNSTNSNTT--KPAFGGLNFGGGNNTTP----SSTGNANTSNNLFGATAN--- 173
Query: 603 TSGQPAFGQPAFGQPVSD--QSAPSKPAFG------------KPTFGSTSFGTQSQTNTT 648
+ +PAF +FG +D ++ P KPAF PT G SFG+Q N T
Sbjct: 174 -ANKPAF---SFGATTNDDKKTEPDKPAFSFNSSVGNKTDAQAPTTG-FSFGSQLGGNKT 228
Query: 649 SPLSEEAETSSVFGTPSFGSTSFGIQGANVTSPFGTNTKISSESSFGKSLFGTSQFGSDS 708
++E A+ S FG+ S G+ G T TN SFG + SD+
Sbjct: 229 --VNEAAKPSLSFGSGSAGANPAGASQPEPT----TNEPAKPALSFGTAT-------SDN 275
Query: 709 AVTNPAPNSFATSAK--------LSSP-FSAFATDQKTINPFETQTSDPFG-HLNSKKED 758
TN P SF+ AK S P FS A ++ + ++ + FG N K+D
Sbjct: 276 KTTNTTP-SFSFGAKSDENKAGATSKPAFSFGAKPEEKKDDNSSKPAFSFGAKSNEDKQD 334
Query: 759 TKSFNFTGFGESISEANHSLPSVTQDSLNSKEVSDSTIENDQSE 802
+ FG +E N++ S S +K SD + D S+
Sbjct: 335 GTAKPAFSFGAKPAEKNNNETSKPAFSFGAK--SDEKKDGDASK 376
>YKL068w [YU] KOG0845 Nuclear pore complex Nup98 component (sc
Nup145/Nup100/Nup116)
Length = 959
Score = 64.3 bits (155), Expect = 1e-09
Identities = 88/351 (25%), Positives = 135/351 (38%), Gaps = 48/351 (13%)
Query: 436 SFFETTNSFAKGFSFTPKNMTDSTNAESEGSQNPLLSSGSSPAFGKPAFGQATFGQVTSS 495
SF T+SF S P ++ ++N + + N S + + FG +
Sbjct: 15 SFGSNTSSFGGQQSQQPNSLFGNSNNNNNSTSNNAQSGFGGFTSAAGSNSNSLFG----N 70
Query: 496 QATPGQSAFGQP--AFGLPTFGKPVSSQPTSGQSAFGQPAFGEPAFGKPASSQPTSGQSA 553
T AFGQ A FG SS ++G + G + G +FG ++ + ++
Sbjct: 71 NNTQNNGAFGQSMGATQNSPFGSLNSSNASNGNTFGGSSSMG--SFGGNTNNAFNNNSNS 128
Query: 554 VGQP-AFGQPAFGEPAFGKPASSQPTSGQSAFGQAAFGPPTFGKPASSQPTSGQPAFGQP 612
P F +P G FG ++ + GQ+ TFG SS FG
Sbjct: 129 TNSPFGFNKPNTGGTLFGSQNNNSAGTSSLFGGQSTSTTGTFGNTGSS--------FGTG 180
Query: 613 AFGQPVSDQSAPSKPAFGKPTFGSTSFGTQSQTNTTSPLSEEAETSSVFGTPSFGSTSFG 672
G G FG+ G SQ+NTT L + SS FGT + + FG
Sbjct: 181 LNGN-------------GSNIFGA---GNNSQSNTTGSLFGNQQ-SSAFGTNNQQGSLFG 223
Query: 673 IQGANVTSPFGTNTKISSESSFGK------SLFGTSQ--FGSDSAVTNPAPNSFATSAKL 724
Q N + FG ++ SSFG SLFG S G+ + N +S +
Sbjct: 224 QQSQNTNNAFGNQNQLGG-SSFGSKPVGSGSLFGQSNNTLGNTTNNRNGLFGQMNSSNQG 282
Query: 725 SSPFSAFATDQKTINPFETQTSDPFGHLNSKKEDTKSFNFTGFGESISEAN 775
SS F N + T FG N++ + + N + FG++ + +N
Sbjct: 283 SSNSGLFGQ-----NSMNSSTQGVFGQNNNQMQINGNNNNSLFGKANTFSN 328
Score = 54.7 bits (130), Expect = 1e-06
Identities = 90/340 (26%), Positives = 129/340 (37%), Gaps = 59/340 (17%)
Query: 436 SFFETTNSFAKGFSFTPKNMTDSTNAESEGSQNPLLSSGSSPAFGKPAFGQATFGQVTSS 495
+F T +SF G + N+ + N + L + S AFG + FGQ
Sbjct: 169 TFGNTGSSFGTGLNGNGSNIFGAGNNSQSNTTGSLFGNQQSSAFGTNNQQGSLFGQ---- 224
Query: 496 QATPGQSAFG-QPAFGLPTFG-KPVSSQPTSGQS--AFGQPAFGEPA-FGKPASSQPTSG 550
Q+ +AFG Q G +FG KPV S GQS G FG+ SS S
Sbjct: 225 QSQNTNNAFGNQNQLGGSSFGSKPVGSGSLFGQSNNTLGNTTNNRNGLFGQMNSSNQGSS 284
Query: 551 QSAV-GQPAFG---QPAFGE-------------PAFGKPASSQPTSGQSAFGQ------- 586
S + GQ + Q FG+ FGK + ++ FGQ
Sbjct: 285 NSGLFGQNSMNSSTQGVFGQNNNQMQINGNNNNSLFGKANTFSNSASGGLFGQNNQQQGS 344
Query: 587 AAFGPPT--------FGKPASSQP-TSGQPAFGQPAFGQPVSDQSAPSKPAFGKPTFGST 637
FG + FG+ QP T Q G FGQ ++Q S FG G+T
Sbjct: 345 GLFGQNSQTSGSSGLFGQNNQKQPNTFTQSNTGIGLFGQN-NNQQQQSTGLFGAKPAGTT 403
Query: 638 S--FGTQSQT---------NTTSPLSEEAETSSVFGTPSFGSTSFG-----IQGANVTSP 681
FG S T N + ++ + +S+FG + FG Q + S
Sbjct: 404 GSLFGGNSSTQPNSLFGTTNVPTSNTQSQQGNSLFGATKLTNMPFGGNPTANQSGSGNSL 463
Query: 682 FGTNTKISSESSFGKSLFGTSQFGSDSAVTNPAPNSFATS 721
FGT ++ S FG + T+ ++ N A NS +T+
Sbjct: 464 FGTKPASTTGSLFGNNTASTTVPSTNGLFGNNANNSTSTT 503
>7294642 [W] KOG3544 Collagens (type IV and type XIII) and related proteins
Length = 1039
Score = 59.7 bits (143), Expect = 3e-08
Identities = 96/440 (21%), Positives = 156/440 (34%), Gaps = 54/440 (12%)
Query: 474 GSSPAFG-KPAFGQATFGQVTSSQATPG---QSAFGQPAFG-LPTFG-KPV--SSQPTSG 525
GS P G + GQ +G + PG Q+A G+P +G P G PV + Q T G
Sbjct: 370 GSQPGVGGQTGAGQPGYGVIPGFGGQPGIGGQTAAGKPGYGGQPGIGGSPVYGTQQGTGG 429
Query: 526 QSAF--GQPAFGEPAFGKPASSQP-------TSGQSAVGQPAFGQPAFGEPAFGKPASSQ 576
QS GQP +G G+ + QP T GQ+ GQP +G + +P G Q
Sbjct: 430 QSGISGGQPGYGTQP-GQTGAGQPGYGSLPGTGGQATAGQPGYGPGS--QPGIG----GQ 482
Query: 577 PTSGQSAFGQ--AAFGPPTFG-KPASSQPT---SGQPA-----FGQPAFGQPVSDQSAPS 625
G +G G P +G +P T GQP GQP +G AP
Sbjct: 483 TVGGHGGYGSQPGIGGAPVYGTQPGGGGQTGVIGGQPGQIGDRVGQPGYGTQTGQIGAPG 542
Query: 626 KPAFGKPTF-GSTSFGTQSQTNTTSPLSEEAETSSVFGTPSFGSTSFGIQGANVTSPFGT 684
+ G T G+ G T+ ++ S G +++ G + +
Sbjct: 543 RYTDGSQTVPGAVGTGGVVAAGTSGADDAFSQAESSIGDGQASASAQGKKNGGTAKTQVS 602
Query: 685 NTKISSESSFGKSLFGTSQFGSDSAVTNPAPNSFATSAKLSSPFSAFATDQKTINPFETQ 744
T S + ++ + + + VT A + + S P + A Q +
Sbjct: 603 GTYSSGGTFSASAMTSDADRAASAQVTGNADGAVSQSQGSGGPAQSQAQVQVAKDGGTKA 662
Query: 745 TSDPFGHLNSKKEDTKSFNFTGFGESISEANHSLPSVTQ-----------DSLNSKEVSD 793
+S G + + + + + G ++ S S Q + N +
Sbjct: 663 SSQSGGIIQQSQSEVHANDKGGLADAQSSGPGQTSSQAQIGFRPGQEANPIAANGGGQAS 722
Query: 794 STIENDQSEVPSPANXXXXXXXXXXXXXNIVSSTDESDSLYGE-DREIYD------NDRS 846
S+ S+ S + S T E + Y E +RE+++ N+ +
Sbjct: 723 SSSGTHSSQSSSQIHGTSSFGVSYHGAAQSASGTKEQVATYREANRELFNTISQFGNNAN 782
Query: 847 DIHIEASSKPSSTVLNSNSD 866
+ A + S L SD
Sbjct: 783 AVTDRADAVYSGPALTDESD 802
Score = 57.4 bits (137), Expect = 2e-07
Identities = 82/300 (27%), Positives = 113/300 (37%), Gaps = 86/300 (28%)
Query: 474 GSSPAFG-KPAFGQATFGQVTSSQATPGQSAFGQPAFG-------LPTFGKP-------- 517
GS P G + GQ+ +G GQ+ GQP +G LP +G
Sbjct: 124 GSQPGIGDQTGTGQSGYG---GQPGISGQTGGGQPGYGGQATISGLPGYGTQPGIGALTA 180
Query: 518 -------VSSQPTSGQSAFGQPAFGEPAFGKPASSQP-TSGQSAVGQPAF---GQPAFG- 565
+QP G GQ +P FG QP GQ+ GQP + GQP G
Sbjct: 181 VPGGHYGYETQPGIG----GQTGTNQPGFG----GQPGIGGQTGAGQPGYGFIGQPGIGG 232
Query: 566 -------EPAF-------GKPASSQP-------TSGQSAFGQAAFG--PPTFGKPASSQP 602
+P + G+ A+ QP GQ GQ +G P G+ + QP
Sbjct: 233 QTGTSGRQPGYGTQPGIGGQTAAGQPGYGSQTGVGGQIGAGQPGYGSQPGIGGQTGAGQP 292
Query: 603 TSG-QPAF-GQPAFG-QP-VSDQSAPSKPAF-------GKPTFGSTSFGTQ----SQTNT 647
G QP F GQP +G QP V Q+ +P + G+ G +G Q Q
Sbjct: 293 GYGAQPGFGGQPGYGNQPGVGGQTGAGQPGYGSQPGIGGQTGAGQPGYGAQPGFGGQLGY 352
Query: 648 TSPLSEEAETSSVFGTPSFGS-------TSFGIQGANVTSPFGTNTKISSESSFGKSLFG 700
+ +T + G P +GS T G G V FG I +++ GK +G
Sbjct: 353 GNQPGVGGQTGA--GQPGYGSQPGVGGQTGAGQPGYGVIPGFGGQPGIGGQTAAGKPGYG 410
>Hs4885225 [R] KOG1995 Conserved Zn-finger protein
Length = 656
Score = 58.9 bits (141), Expect = 6e-08
Identities = 66/284 (23%), Positives = 114/284 (39%), Gaps = 45/284 (15%)
Query: 494 SSQATPGQS----AFGQPAFGLPTFGKPVSSQPTSGQSAFGQPAFGEPAFGKPASSQPTS 549
++Q T G + A+GQ ++G T+G+P T Q+ +G+ A+ PT
Sbjct: 22 TAQPTQGYAQTTQAYGQQSYG--TYGQPTDVSYTQAQTT---ATYGQTAYATSYGQPPTG 76
Query: 550 GQSAVGQPAFGQPA--FGEPAFGKPASSQPTSGQSAFGQAAFGP----PTFGK-PASSQP 602
+ A+ QP +G A+ ++ T+ S Q+A+G P +G+ PA++ P
Sbjct: 77 YTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAYPAYGQQPAATAP 136
Query: 603 T----------SGQP------------AFGQPAFGQPVSDQSAPSKPAFGKPTFGSTSFG 640
T + QP +GQ + P S P +P P++ TS+
Sbjct: 137 TRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSY- 195
Query: 641 TQSQTNTTSPLSEEAETSSVFGTP-SFG-STSFGIQGANVTSPFGTNTKISSESSFGKSL 698
S T TS + +G P S+G +S+G Q + P + + S S
Sbjct: 196 --SSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPSQ 253
Query: 699 FG--TSQFGSDSAVTNPAPNSFATSAKLSSPFSAFATDQKTINP 740
+ +S +G S+ P+S + S FS ++ P
Sbjct: 254 YSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGP 297
>CE13738 [YU] KOG0845 Nuclear pore complex Nup98 component (sc
Nup145/Nup100/Nup116)
Length = 1217
Score = 58.9 bits (141), Expect = 6e-08
Identities = 83/321 (25%), Positives = 116/321 (35%), Gaps = 50/321 (15%)
Query: 414 TLISPQDTKNTITEVRKVPEQSSFFETTNSFAKGFSFTPKNMTDSTNAESEGSQ---NPL 470
T +P T V +S +T+ F G S T N+ + A+S S P+
Sbjct: 922 TAAAPVSTATAEAVKTNVFGSNSASASTSLFGAGSSSTATNLFTTKPADSTTSSIFGKPI 981
Query: 471 L---SSGSSPAFGKPAFGQATFGQVTSSQATPGQSAFGQPAFGLPTFGKPVSSQPTSGQS 527
SG++ G PA + F + GQ P F FG P S+ T+ S
Sbjct: 982 SFGDDSGTTTTDGAPA-KRGLFSSDSQKLQFGGQQKVEMPKF--TGFGNPASTASTTSGS 1038
Query: 528 AFGQPAFGEPAFGKPASSQPTSGQSAVGQPAFGQPAFGEPAFGKPASSQPTSGQSAFGQA 587
FG + P FG P+SS + ++ G P+ FG + TS FG
Sbjct: 1039 LFGGASTNPPMFGGPSSSSIPAFSTSNSSSTSGFPSSTATPFGNAGT---TSTSGVFG-- 1093
Query: 588 AFGPPTFGKPASSQPTSGQPAFGQPAFGQPVSDQSAPSKPAFGKPTFGSTSFGTQSQTNT 647
AFG KP SQP + FGQ +D S P FG + +FG S T
Sbjct: 1094 AFG----NKP--SQPGLSSSSSTNSLFGQAPADSSNP----FGGTSNNGFNFGASSSTT- 1142
Query: 648 TSPLSEEAETSSVFGTPSFGSTSFGIQGANVTSPFGTNTKISSESSFGKSLFGTSQFGSD 707
T+ G FG+ + A +P G G QFG +
Sbjct: 1143 -------GATAGGGGVFQFGNAATSAP-APTAAPGG----------------GAFQFGGN 1178
Query: 708 SAVTN-PAPNSFATSAKLSSP 727
+V PAP + +P
Sbjct: 1179 MSVPQAPAPGGMENAFSYQAP 1199
Score = 57.0 bits (136), Expect = 2e-07
Identities = 112/369 (30%), Positives = 139/369 (37%), Gaps = 90/369 (24%)
Query: 458 STNAESEGSQNPLLSSGSSPAFGKPAFGQATFGQVTSSQATPGQSAFGQPAFGLPTFGKP 517
S+N + PL S+GS+ +FG V S AT SAF AFGL K
Sbjct: 704 SSNVFGNRAFKPLSSTGSTISFG-----------VGGSTATTQPSAF---AFGL---SKT 746
Query: 518 VSSQPTSGQSAFGQPAFGEPAFGKPA-SSQPTSGQSAVGQPAFGQPAFGEPAFGKPASSQ 576
PTS PAFG A KPA SS P SA P FG A KPA S
Sbjct: 747 TEVAPTS------TPAFGLSA--KPAVSSAPVEKPSAPEVPKTAGSLFGNIA--KPADSA 796
Query: 577 PTSGQSAFGQAAFGPPTFGKPASSQPTSGQPAFGQPA---FGQPVSDQSAPSKPA-FG-- 630
TS P +S PT+G FG F ++ + +KP FG
Sbjct: 797 TTS--------FLAPGAASSTSSLAPTAGSSLFGGSTGSIFNLNKTNTTETAKPGLFGSI 848
Query: 631 --KPTFGST---SFGTQSQTNTT---SPLSEEAETSSVFG---TPSFGSTS-FG-----I 673
K T +T S S T++T S + A T S+FG T SFG +S FG +
Sbjct: 849 LDKETHVTTTPVSVALPSSTDSTQSKSAIPTIAPTMSLFGNSSTGSFGGSSMFGNSKTEL 908
Query: 674 QGANVTSPFG------------------TNTKISSESSFGKSLFGTSQFGSDSAVTN--- 712
+ T FG TN S+ +S SLFG GS S TN
Sbjct: 909 PKISSTLSFGNPTTAAAPVSTATAEAVKTNVFGSNSASASTSLFGA---GSSSTATNLFT 965
Query: 713 PAPNSFATSAKLSSPFSAFATDQKTINPFETQTSDPFGHLNSKK------EDTKSFNFTG 766
P TS+ P S F D T +S+K + + FTG
Sbjct: 966 TKPADSTTSSIFGKPIS-FGDDSGTTTTDGAPAKRGLFSSDSQKLQFGGQQKVEMPKFTG 1024
Query: 767 FGESISEAN 775
FG S A+
Sbjct: 1025 FGNPASTAS 1033
>Hs4826872 [YU] KOG4719 Nuclear pore complex protein
Length = 1475
Score = 58.2 bits (139), Expect = 1e-07
Identities = 88/292 (30%), Positives = 113/292 (38%), Gaps = 58/292 (19%)
Query: 458 STNAESEGSQNPLLS----SGSSPAFGKPAFGQATFGQVTSSQATP-GQSAFGQPA--FG 510
ST A+ +G+ P+ S S SS + + G FG TSS P FGQ +
Sbjct: 1178 STTAD-QGAAKPVFSFLNNSSSSSSTPATSAGGGIFGSSTSSSNPPVATFVFGQSSNPVS 1236
Query: 511 LPTFGKPVSSQPTSGQSAFGQ-----------PAFGEPAFGKPASSQPTS------GQSA 553
FG S TS F Q A FG ASS T+ G +
Sbjct: 1237 SSAFGNTAESS-TSQSLLFSQDSKLATTSSTGTAVTPFVFGPGASSNNTTTSGFGFGATT 1295
Query: 554 VGQPAFGQPAFG--------EPAFGKPASSQPTSGQSAFGQAAFGPPTFGKPASSQ---P 602
A FG PAFG A+ PT GQS G + PP FG +SS P
Sbjct: 1296 TSSSAGSSFVFGTGPSAPSASPAFG--ANQTPTFGQSQ-GASQPNPPGFGSISSSTALFP 1352
Query: 603 TSGQPAFGQPAFG------QPVSDQSAPSKPAFGKPTFGSTSFGTQSQTNTTSPLSEEAE 656
T QPA P FG QP PS+ AFG T ++S Q ++TT+
Sbjct: 1353 TGSQPA--PPTFGTVSSSSQPPVFGQQPSQSAFGSGTTPNSSSAFQFGSSTTNFNFTNNS 1410
Query: 657 TSSVF------GTPSFGSTSFGIQGANVTSPFGTNTKISSESSFGKSLFGTS 702
S VF TP+ + G G PF + + S GK++F +S
Sbjct: 1411 PSGVFTFGANSSTPAASAQPSGSGG----FPFNQSPAAFTVGSNGKNVFSSS 1458
Score = 56.6 bits (135), Expect = 3e-07
Identities = 88/334 (26%), Positives = 120/334 (35%), Gaps = 26/334 (7%)
Query: 464 EGSQNPLLSSGSSPAFGKPAFG-----QATFGQVTSSQATPGQSAFGQPAFGLPTFGKPV 518
E Q P+ S+ S FGK A Q F S Q S+ +F + +
Sbjct: 1105 EKQQEPVTST--SLVFGKKADNEEPKCQPVFSFGNSEQTKDENSSKSTFSFSMTKPSEKE 1162
Query: 519 SSQPTSGQSAFGQPAF--GEPAFGKPASSQPTSGQSAVGQPAFGQPAFGEPAFGKP-ASS 575
S QP AFG + KP S + S+ PA + G FG +SS
Sbjct: 1163 SEQPAKATFAFGAQTSTTADQGAAKPVFSFLNNSSSSSSTPA---TSAGGGIFGSSTSSS 1219
Query: 576 QPTSGQSAFGQAA--FGPPTFGKPASSQPTSGQPAFGQPAFGQPVSDQSAPSKPAFGKPT 633
P FGQ++ FG A S TS F Q + S P P
Sbjct: 1220 NPPVATFVFGQSSNPVSSSAFGNTAESS-TSQSLLFSQDSKLATTSSTGTAVTPFVFGPG 1278
Query: 634 FGSTSFGTQSQTNTTSPLSEEAETSSVFGTPSFGSTSFGIQGANVTSPFGTNTKISSES- 692
S + T + S A +S VFGT ++ GAN T FG + S +
Sbjct: 1279 ASSNNTTTSGFGFGATTTSSSAGSSFVFGTGPSAPSASPAFGANQTPTFGQSQGASQPNP 1338
Query: 693 -SFGKSLFGTSQFGSDSAVTNPAPNSFATSAKLSSPFSAFATDQKTINPFETQTSDPFGH 751
FG T+ F + S PAP +F T + S P Q + + F + T+
Sbjct: 1339 PGFGSISSSTALFPTGS---QPAPPTFGTVSSSSQP--PVFGQQPSQSAFGSGTTPNSSS 1393
Query: 752 LNSKKEDTKSFNFTG---FGESISEANHSLPSVT 782
T +FNFT G AN S P+ +
Sbjct: 1394 AFQFGSSTTNFNFTNNSPSGVFTFGANSSTPAAS 1427
>Hs19923345 [R] KOG4307 RNA binding protein RBM12/SWAN
Length = 932
Score = 58.2 bits (139), Expect = 1e-07
Identities = 50/160 (31%), Positives = 65/160 (40%), Gaps = 23/160 (14%)
Query: 492 VTSSQATPGQSAFGQPAFGLPTFGKPVSSQPTSGQSAFGQPAFGEPAFGKPASSQPTSG- 550
V + A PG G P GLP+ G P + P++G + G P G P++ P++G
Sbjct: 643 VPGNPAVPGMPNAGLPGVGLPSAGLPGAGLPSTGLPGSAITSAGLPGAGMPSAGIPSAGG 702
Query: 551 ----------QSAVGQPAFGQPA--FGEPAFGKPASSQPTSGQSAFGQAAFGPPTFGKPA 598
+ A P F P G AFG P P G AFG A G P+ G
Sbjct: 703 EEHAFLTVGSKEANNGPPFNFPGNFGGSNAFGPPI-PPPGLGGGAFGDARPGMPSVG--- 758
Query: 599 SSQPTSGQPAFG--QPAFGQPVSDQSAPSKPAFGKPTFGS 636
SG P G P FG ++ S PS G FG+
Sbjct: 759 ----NSGLPGLGLDVPGFGGGPNNLSGPSGFGGGPQNFGN 794
>CE29052 [A] KOG0335 ATP-dependent RNA helicase
Length = 1156
Score = 57.8 bits (138), Expect = 1e-07
Identities = 72/241 (29%), Positives = 97/241 (39%), Gaps = 31/241 (12%)
Query: 445 AKGFSFTPKNMT--DSTNAESEGSQNPLLSSGSSPAFGKPAFGQATFGQVTSSQATPGQS 502
+KGF KN DS+++ GS+ + SS G+ + G T +T G
Sbjct: 319 SKGFGGATKNGFGGDSSSSFGSGSKAGFGGTSSSGIGGQKPGATESSGFPTKETSTSG-G 377
Query: 503 AFGQPAFGLPT---FGKPVSSQPTSGQSAFGQPAFGEPAFGKPASSQPTSGQSA--VGQP 557
FG G PT FG P ++ +SGQ G +P FG +S+ SG A G
Sbjct: 378 TFGSGFGGKPTSTGFGAPSTTDSSSGQQTAGFGGASKPGFGGDSSTGFGSGLKAGFGGHR 437
Query: 558 AFGQPAFGEP----AFG---KPAS-SQPTSGQSAFGQAA--FGPPT---FGKPASSQPTS 604
A G P FG PA +S +SAFGQ + FG T FG +S+
Sbjct: 438 ASTAENSGLPTETTGFGGKLPPAGFGASSSNESAFGQQSKGFGGATKNGFGGDSSNSFGK 497
Query: 605 GQPAFGQPAFGQPVSDQSAPSKPAFG---------KPTFGSTSFGTQSQTNTTSPLSEEA 655
FG P Q D APSK G K FG+ FG+ S + E +
Sbjct: 498 RDSGFGGPQ-DQGFGDTDAPSKSGLGSFNTGGGAVKSAFGAAGFGSSSNFGNGNTFGEPS 556
Query: 656 E 656
+
Sbjct: 557 D 557
Score = 53.1 bits (126), Expect = 3e-06
Identities = 73/263 (27%), Positives = 99/263 (36%), Gaps = 42/263 (15%)
Query: 476 SPAFGKPAFGQATFGQVTSSQATPGQSAFGQPAFGLPTFGKPVSSQPTSGQSAFGQPAFG 535
S FG + ++ FGQ + ++ FG + G TS GQ
Sbjct: 302 SAGFGASSSNESAFGQQSKGFGGATKNGFGGDSSSSFGSGSKAGFGGTSSSGIGGQKPGA 361
Query: 536 EPAFGKPASSQPTSGQSAVGQPAFGQPAFGEP---AFGKPASSQPTSGQSAFGQAAFGPP 592
+ G P TSG + FG G+P FG P+++ +SGQ G P
Sbjct: 362 TESSGFPTKETSTSGGT------FGSGFGGKPTSTGFGAPSTTDSSSGQQTAGFGGASKP 415
Query: 593 TFGKPASSQPTSGQPA-FG------QPAFGQPVSDQSAPSK--PA-FGKPTFGSTSFGTQ 642
FG +S+ SG A FG G P K PA FG + ++FG Q
Sbjct: 416 GFGGDSSTGFGSGLKAGFGGHRASTAENSGLPTETTGFGGKLPPAGFGASSSNESAFGQQ 475
Query: 643 SQTNTTSPLSEEAETSSVFGTPSFGSTSFGIQGANVTSP----FGTNTKISSESSFG--- 695
S+ T + FG S S SFG + + P FG +T S+S G
Sbjct: 476 SK-------GFGGATKNGFGGDS--SNSFGKRDSGFGGPQDQGFG-DTDAPSKSGLGSFN 525
Query: 696 ------KSLFGTSQFGSDSAVTN 712
KS FG + FGS S N
Sbjct: 526 TGGGAVKSAFGAAGFGSSSNFGN 548
Score = 52.0 bits (123), Expect = 7e-06
Identities = 83/335 (24%), Positives = 122/335 (35%), Gaps = 24/335 (7%)
Query: 447 GFSFTPKNMTDSTNAESEGSQNPLLSSGSSPAFGKPAFGQATFGQVTSSQATPGQSAFGQ 506
G +F+ N D + G+ + +GS K T G S T S+FGQ
Sbjct: 152 GGAFSSANNFDQQDKGFGGAASSGFGNGSMLTNQKVGLENQTTGVGASEVPTSKPSSFGQ 211
Query: 507 PAFGLPTFGKPV-------SSQPTSGQSAFGQPAFGEPAFGKPASSQPTSGQSAVGQPAF 559
+ FG SS GQ A + G P S G S+ G +
Sbjct: 212 QPAVVSGFGGAAKMGFGGSSSSGFGGQKAGATESSGFPTKETSTSQPGFGGDSSTGFGSG 271
Query: 560 GQPAFGEPAFGKPASSQPTSGQSAFG----QAAFGPPTFGKPASSQPTSGQPAFGQPAFG 615
+ FG G +S + + FG A FG + + A Q + G + FG
Sbjct: 272 LKAGFGGHGAGAAENSGLPTETTGFGGKLPSAGFGASSSNESAFGQQSKGFGGATKNGFG 331
Query: 616 QPVSDQ-SAPSKPAFGKPTFGSTSFGTQSQTNTTSPLSEEAETSSVFGTPSFGSTSFGIQ 674
S + SK FG + S+ G Q T S ETS+ GT FGS G
Sbjct: 332 GDSSSSFGSGSKAGFGGTS--SSGIGGQKPGATESSGFPTKETSTSGGT--FGS---GFG 384
Query: 675 GANVTSPFGTNTKISSESSFGKSLFGTSQFGSDSAVTNPAPNSFATSAKLSSPFSAFATD 734
G ++ FG + +++SS G+ T+ FG S +S + L + F
Sbjct: 385 GKPTSTGFGAPS--TTDSSSGQQ---TAGFGGASKPGFGGDSSTGFGSGLKAGFGGHRAS 439
Query: 735 QKTINPFETQTSDPFGHLNSKKEDTKSFNFTGFGE 769
+ T+T+ G L S N + FG+
Sbjct: 440 TAENSGLPTETTGFGGKLPPAGFGASSSNESAFGQ 474
>CE04240 [W] KOG3544 Collagens (type IV and type XIII) and related proteins
Length = 589
Score = 57.8 bits (138), Expect = 1e-07
Identities = 46/187 (24%), Positives = 71/187 (37%), Gaps = 10/187 (5%)
Query: 452 PKNMTDSTNAE-SEGSQNPLLSSGSSPAFGKPAFGQATFGQVTSSQATPGQSAFG--QPA 508
P + D + A S G P SG+ P+ G P G S+A P G P+
Sbjct: 166 PPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPP-------GPFNPSEAPPSGGPTGPFDPS 218
Query: 509 FGLPTFGKPVSSQPTSGQSAFGQPAFGEPAFGKPASSQPTSGQSAVGQPAFGQPAFGEPA 568
P+ G P P+ + G P +P+ P+ P + P+ G P +P+
Sbjct: 219 GAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPS 278
Query: 569 FGKPASSQPTSGQSAFGQAAFGPPTFGKPASSQPTSGQPAFGQPAFGQPVSDQSAPSKPA 628
P+ P + + GPP P+ +QP+ G P P+ P P P+
Sbjct: 279 GAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPS 338
Query: 629 FGKPTFG 635
P+ G
Sbjct: 339 GAPPSGG 345
Score = 57.0 bits (136), Expect = 2e-07
Identities = 66/271 (24%), Positives = 94/271 (34%), Gaps = 15/271 (5%)
Query: 452 PKNMTDSTNAE-SEGSQNPLLSSGSSPAFGKPAFGQATFGQVTSSQATPGQSAFGQPAFG 510
P D + A+ S G P SG+ P+ G P + + P + P+ G
Sbjct: 301 PPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGG 360
Query: 511 LPTFGKPVSSQPTSGQSAFGQPAFGEPAFGKPASSQPTSGQSAVGQPAFGQPAFGEPAFG 570
P P + P+ G P+ P+ G P P+ + G P P+ P+ G
Sbjct: 361 PPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGG 420
Query: 571 KPASSQPTSGQSAFGQAAFGPPTFGKPASSQPTSGQPAFGQPAFGQPVSDQSAPSKPAFG 630
P P SG G GPP P+ + P+ G P P+ P P P+
Sbjct: 421 PPGPFNP-SGAPPSG----GPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGA 475
Query: 631 KPTFGSTS----FGTQSQTNTTSPLSEEAETSSVFGTPSFGSTSFGIQGANVTSPFGTNT 686
P+ G G P + S G P S P T+
Sbjct: 476 PPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPS-GGPPGPFDPSGAPPSGMPPVPLPTDL 534
Query: 687 KISSES-SFGKSLFGTSQFGSDSAVTNPAPN 716
I SES SF + +FG + S PAP+
Sbjct: 535 PIPSESPSFFQWIFGRPK---PSGPAGPAPS 562
Score = 56.2 bits (134), Expect = 4e-07
Identities = 44/173 (25%), Positives = 64/173 (36%), Gaps = 5/173 (2%)
Query: 463 SEGSQNPLLSSGSSPAFGKPAFGQATFGQVTSSQATPGQSAFGQPAFGLPTFGKPVSSQP 522
S G P SG+ P+ G P + Q + P + P+ G P P + P
Sbjct: 283 SGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPP 342
Query: 523 TSGQSAFGQPAFGEPAFGKPASSQPTSGQSAVGQPAFGQPAFGEPAFGKPASSQPTSGQS 582
+ G P+ P+ G P P+ + G P P+ P+ G P P SG
Sbjct: 343 SGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDP-SGAP 401
Query: 583 AFGQAAFGPPTFGKPASSQPTSGQPAFGQPAFGQPVSDQSAPSKPAFGKPTFG 635
G GPP P+ + P+ G P P+ P P P+ P+ G
Sbjct: 402 PSG----GPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGG 450
Score = 56.2 bits (134), Expect = 4e-07
Identities = 44/173 (25%), Positives = 64/173 (36%), Gaps = 5/173 (2%)
Query: 463 SEGSQNPLLSSGSSPAFGKPAFGQATFGQVTSSQATPGQSAFGQPAFGLPTFGKPVSSQP 522
S G P SG+ P+ G P + + P + P+ G P P + P
Sbjct: 223 SGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPP 282
Query: 523 TSGQSAFGQPAFGEPAFGKPASSQPTSGQSAVGQPAFGQPAFGEPAFGKPASSQPTSGQS 582
+ G P+ P+ G P P+ Q + G P P+ P+ G P P SG
Sbjct: 283 SGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDP-SGAP 341
Query: 583 AFGQAAFGPPTFGKPASSQPTSGQPAFGQPAFGQPVSDQSAPSKPAFGKPTFG 635
G GPP P+ + P+ G P P+ P P P+ P+ G
Sbjct: 342 PSG----GPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGG 390
Score = 55.8 bits (133), Expect = 5e-07
Identities = 43/173 (24%), Positives = 65/173 (36%), Gaps = 5/173 (2%)
Query: 463 SEGSQNPLLSSGSSPAFGKPAFGQATFGQVTSSQATPGQSAFGQPAFGLPTFGKPVSSQP 522
S G P SG+ P+ G P + + P + P+ G P P + P
Sbjct: 148 SGGPPGPFDPSGAPPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPP 207
Query: 523 TSGQSAFGQPAFGEPAFGKPASSQPTSGQSAVGQPAFGQPAFGEPAFGKPASSQPTSGQS 582
+ G + P+ P+ G P P+ + G P P+ P+ G P P SG
Sbjct: 208 SGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNP-SGAP 266
Query: 583 AFGQAAFGPPTFGKPASSQPTSGQPAFGQPAFGQPVSDQSAPSKPAFGKPTFG 635
G GPP P+ + P+ G P P+ P P P+ +P+ G
Sbjct: 267 PSG----GPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGG 315
Score = 54.7 bits (130), Expect = 1e-06
Identities = 43/175 (24%), Positives = 67/175 (37%), Gaps = 10/175 (5%)
Query: 463 SEGSQNPLLSSGSSPAFGKPAFGQATFGQVTSSQATPGQSAFGQPAFGLPTFGKPVSSQP 522
S G P SG+ P+ G P + + P + QP+ G P P + P
Sbjct: 268 SGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPP 327
Query: 523 TSGQSAFGQPAFGEPAFG-----KPASSQPTSGQSAVGQPAFGQPAFGEPAFGKPASSQP 577
+ G P+ P+ G P+ + P+ G P+ P+ G P P+ + P
Sbjct: 328 SGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPP 387
Query: 578 TSGQSAFGQAAFGPPTFGKPASSQPTSGQPAFGQPAFGQPVSDQSAPSKPAFGKP 632
+ G + PP+ G P P+ P+ G P P + AP P+ G P
Sbjct: 388 SGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPG---PFNPSGAP--PSGGPP 437
Score = 54.7 bits (130), Expect = 1e-06
Identities = 45/186 (24%), Positives = 68/186 (36%), Gaps = 10/186 (5%)
Query: 452 PKNMTDSTNAESEGSQNPLLSSGSSPAFGKPAFGQATFGQVTSSQATPGQSAFGQPAFGL 511
P S S G P SG+ P+ G P + + P + P+ G
Sbjct: 197 PGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGP 256
Query: 512 PTFGKPVSSQPTSGQSAFGQPAFGEPAFGKP-----ASSQPTSGQSAVGQPAFGQPAFGE 566
P P + P+ G P+ P+ G P + + P+ G P+ QP+ G
Sbjct: 257 PGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGP 316
Query: 567 PAFGKPASSQPTSGQSAFGQAAFGPPTFGKPASSQPTSGQPAFGQPAFGQPVSDQSAPSK 626
P P+ + P+ G + PP+ G P P+ P+ G P P AP
Sbjct: 317 PGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPG---PFDPSGAP-- 371
Query: 627 PAFGKP 632
P+ G P
Sbjct: 372 PSGGPP 377
Score = 54.7 bits (130), Expect = 1e-06
Identities = 43/173 (24%), Positives = 63/173 (35%), Gaps = 5/173 (2%)
Query: 463 SEGSQNPLLSSGSSPAFGKPAFGQATFGQVTSSQATPGQSAFGQPAFGLPTFGKPVSSQP 522
S G P SG+ P+ G P + + P + P+ G P P + P
Sbjct: 298 SGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPP 357
Query: 523 TSGQSAFGQPAFGEPAFGKPASSQPTSGQSAVGQPAFGQPAFGEPAFGKPASSQPTSGQS 582
+ G P+ P+ G P P+ + G P P+ P+ G P P SG
Sbjct: 358 SGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNP-SGAP 416
Query: 583 AFGQAAFGPPTFGKPASSQPTSGQPAFGQPAFGQPVSDQSAPSKPAFGKPTFG 635
G GPP P+ + P+ G P P+ P P P+ P+ G
Sbjct: 417 PSG----GPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGG 465
Score = 54.3 bits (129), Expect = 1e-06
Identities = 43/175 (24%), Positives = 65/175 (36%), Gaps = 10/175 (5%)
Query: 463 SEGSQNPLLSSGSSPAFGKPAFGQATFGQVTSSQATPGQSAFGQPAFGLPTFGKPVSSQP 522
S G P SG+ P+ G P + + P + P+ G P P +QP
Sbjct: 253 SGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQP 312
Query: 523 TSGQSAFGQPAFGEPAFGKPASSQPTSGQSAVGQPAFGQPAFGEPAFGKPASSQPTSGQS 582
+ G P+ P+ G P P+ + G P P+ P+ G P P+
Sbjct: 313 SGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPP 372
Query: 583 AFG-----QAAFGPPTFGKPASSQPTSGQPAFGQPAFGQPVSDQSAPSKPAFGKP 632
+ G + PP+ G P P+ P+ G P P + AP P+ G P
Sbjct: 373 SGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPG---PFNPSGAP--PSGGPP 422
Score = 54.3 bits (129), Expect = 1e-06
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 10/175 (5%)
Query: 463 SEGSQNPLLSSGSSPAFGKPAFGQATFGQVTSSQATPGQSAFGQPAFGLPTFGKPVSSQP 522
S G P SG+ P+ G P + + P + P+ G P P + P
Sbjct: 238 SGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPP 297
Query: 523 TSG-----QSAFGQPAFGEPAFGKPASSQPTSGQSAVGQPAFGQPAFGEPAFGKPASSQP 577
+ G + QP+ G P P+ + P+ G P+ P+ G P P+ + P
Sbjct: 298 SGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPP 357
Query: 578 TSGQSAFGQAAFGPPTFGKPASSQPTSGQPAFGQPAFGQPVSDQSAPSKPAFGKP 632
+ G + PP+ G P P+ P+ G P P AP P+ G P
Sbjct: 358 SGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPG---PFDPSGAP--PSGGPP 407
Score = 51.6 bits (122), Expect = 9e-06
Identities = 56/214 (26%), Positives = 78/214 (36%), Gaps = 22/214 (10%)
Query: 463 SEGSQNPLLSSGSSPAFGKPAFGQATFGQVTSSQATPGQSAFGQPAFGLPTFGKPVSSQP 522
S G P SG+ P+ G P + + P + P+ G P P + P
Sbjct: 388 SGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPP 447
Query: 523 TSGQSAFGQPAFGEPAFGKPASSQPTSGQSAVGQPAFGQPAFGEPAFGKPASSQPTSGQS 582
+ G P+ P+ G P P+ + G P P+ P+ G P P+
Sbjct: 448 SGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPP 507
Query: 583 AFGQAA----FGPPTFGKPASSQPT-----SGQPAFGQPAFGQPVSDQSAPSKPA-FGKP 632
+ G G P G P PT S P+F Q FG+P S P+ PA G+P
Sbjct: 508 SGGPPGPFDPSGAPPSGMPPVPLPTDLPIPSESPSFFQWIFGRP--KPSGPAGPAPSGEP 565
Query: 633 TFGSTSFGTQSQTNTTSPLSEEAETSSVFGTPSF 666
G P SE +E S + PSF
Sbjct: 566 PGPFDPSG--------PPPSESSEGSGI--PPSF 589
>CE10988_1 [YU] KOG0845 Nuclear pore complex Nup98 component (sc
Nup145/Nup100/Nup116)
Length = 608
Score = 57.0 bits (136), Expect = 2e-07
Identities = 73/253 (28%), Positives = 95/253 (36%), Gaps = 51/253 (20%)
Query: 472 SSGSSPAFGKPAFGQAT------FGQVTSSQATPGQSAFG--------QPAFGLPTFGKP 517
SS S+ A PA A FG T++ A P S G PA LPT G
Sbjct: 330 SSASTTAAAAPATAPAAASTGGLFGATTAAAAAPTSSTTGGLFGSTAAAPAASLPTGGLF 389
Query: 518 VSSQPTSGQSAFGQPAFGE--------PAFGKPASSQPTSGQSAVGQPAFGQPA-FGEPA 568
SS P +A FG PA G + P + + PA FG +
Sbjct: 390 GSSTPAKTPAAPTAGLFGASSTTTTSAPATGSLFGTAPATTTATSAAPAASTGGLFGASS 449
Query: 569 FGKPASSQPTSGQSAFGQAAFGPPTFGKPASSQPTSG--------QPAFGQPA---FGQP 617
PAS+ PT G FG T PA++ PT G PA P FG
Sbjct: 450 TTTPASTAPTGG-------LFGAATTTAPAAAAPTGGLFGAATTTAPATVGPTGGLFGAA 502
Query: 618 VSDQSAPSKPAFGKPTFGSTSFGTQSQTNTTSPLSEEAETSSVFG-------TP---SFG 667
+ A + P+ S + + T+TTS L + AE + G TP G
Sbjct: 503 TTTTPATAATLGQTPSTVSATPSLPTTTSTTSTLPKPAEATPTLGLGLGLTSTPLAKGTG 562
Query: 668 STSFGIQGANVTS 680
T+ G++GA TS
Sbjct: 563 WTTSGLKGAATTS 575
Score = 57.0 bits (136), Expect = 2e-07
Identities = 83/323 (25%), Positives = 116/323 (35%), Gaps = 55/323 (17%)
Query: 465 GSQNPLLSSGSSPAFGKPAFGQATFGQVTSSQATPGQSAFGQPAFGLPTFGKPVSSQPTS 524
GS SSG + PA FG ++S A P FG A P S+ P
Sbjct: 160 GSSTAAPSSGLFGSTAAPAAPGGLFGSTSTSTAAPSGGLFGSSA-------APTSTAPAP 212
Query: 525 GQSAFGQPAFGEPAFGKPASSQPTSGQSAVGQPAFGQPAFG------EPAFGKPASSQP- 577
FG PA A + G SA A FG P+ G S+ P
Sbjct: 213 SGGLFG----AAPATSNAAPTSGLFGNSAPAATASSGGLFGAAPKPAAPSGGLFGSTAPA 268
Query: 578 -TSGQSAFGQAAFGPPTFGKPASSQPTSGQ-PAFGQPA------FGQPVSDQSAPSKPAF 629
T+ + FG PT P+S+ T G A PA F + S PS F
Sbjct: 269 TTAATTTATSGLFGAPT-SAPSSAPATGGLFGASTAPAAATGGLFSIGAASASTPSVGLF 327
Query: 630 GKPTFGSTSFGTQSQTNTTSPLSEEAETSSVFGTPS------FGSTSFGIQGANVTSP-- 681
G S++ T + T+P + A T +FG + ST+ G+ G+ +P
Sbjct: 328 G----NSSASTTAAAAPATAPAA--ASTGGLFGATTAAAAAPTSSTTGGLFGSTAAAPAA 381
Query: 682 -------FGTNTKISSESSFGKSLFGTSQFGSDSAV-------TNPAPNSFATSAKLSSP 727
FG++T + ++ LFG S + SA T PA + ++A +S
Sbjct: 382 SLPTGGLFGSSTPAKTPAAPTAGLFGASSTTTTSAPATGSLFGTAPATTTATSAAPAAST 441
Query: 728 FSAFATDQKTINPFETQTSDPFG 750
F T T FG
Sbjct: 442 GGLFGASSTTTPASTAPTGGLFG 464
Score = 55.5 bits (132), Expect = 6e-07
Identities = 72/265 (27%), Positives = 105/265 (39%), Gaps = 36/265 (13%)
Query: 479 FGKPAFGQATFGQVTSSQATPGQSAFGQPAFGLPTFGKPVSSQPTSGQSAFG--QPAFGE 536
FG A + FG ++ +FG + G + T+G +FG QP+ G
Sbjct: 2 FGGSAPKPSIFGGTAATTTASSGFSFGNSSTSTANTG---GNTNTTGGFSFGSAQPSTGS 58
Query: 537 PA-FGKPASSQPTSGQSAVGQPAFGQPA-FGEPAFGKPASSQPTSGQSAFGQAAFGPPTF 594
FG ++ G S+ PA FG PA + + S+ AA TF
Sbjct: 59 TGLFGNSTATGSMFGGSSAAAPAPASAGIFGNSGAAAPAPASTSIFGSSANSAAPATVTF 118
Query: 595 GKPASSQPTSGQPAFGQPAFGQPVSDQSAPSKPAFGKPTFGSTSFGTQSQTNTTSPLSEE 654
G +S P++G FG + +AP+ FG STS T + T S
Sbjct: 119 G---ASAPSAGAGMFG-------ANKPAAPTGGLFGS----STSTATTAPTGGLFGSSTA 164
Query: 655 AETSSVFGTPSFGSTSFGIQGANVTSPFGTNTKISSESSFGKSLFGTSQ--------FGS 706
A +S +FG+ + + G+ G+ TS T S FG S TS FG+
Sbjct: 165 APSSGLFGSTAAPAAPGGLFGSTSTS-----TAAPSGGLFGSSAAPTSTAPAPSGGLFGA 219
Query: 707 DSAVTNPAPNS--FATSAKLSSPFS 729
A +N AP S F SA ++ S
Sbjct: 220 APATSNAAPTSGLFGNSAPAATASS 244
>Hs7669490 [R] KOG1995 Conserved Zn-finger protein
Length = 583
Score = 56.2 bits (134), Expect = 4e-07
Identities = 52/221 (23%), Positives = 95/221 (42%), Gaps = 26/221 (11%)
Query: 494 SSQATPGQS----AFGQPAFGLPTFGKPVSSQPTSGQSAFGQPAFGEPAFGKPASSQPTS 549
++Q T G + A+GQ ++G T+G+P T Q+ +G+ A+ PT
Sbjct: 22 TAQPTQGYAQTTQAYGQQSYG--TYGQPTDVSYTQAQTT---ATYGQTAYATSYGQPPTG 76
Query: 550 GQSAVGQPAFGQPA--FGEPAFGKPASSQPTSGQSAFGQAAFGP----PTFGK-PASSQP 602
+ A+ QP +G A+ ++ T+ S Q+A+G P +G+ PA++ P
Sbjct: 77 YTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAYPAYGQQPAATAP 136
Query: 603 TSGQPAFGQPAFGQPVSDQSAPSKPAFGKPTFGSTSF------GTQSQTNTTSPLSEEAE 656
T Q QP S ++P+ G +G +++ G+ T+P S
Sbjct: 137 TRPQDGNKPTETSQPQSSTGGYNQPSLG---YGQSNYSYPQVPGSYPMQPVTAPPSYPPT 193
Query: 657 TSSVFGTPSFGSTSFGIQGA-NVTSPFGTNTKISSESSFGK 696
+ S S+ +S+ Q S +G + +SS+G+
Sbjct: 194 SYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQ 234
>YGR119c [YU] KOG3091 Nuclear pore complex p54 component (sc Nup57)
Length = 541
Score = 53.9 bits (128), Expect = 2e-06
Identities = 66/234 (28%), Positives = 91/234 (38%), Gaps = 25/234 (10%)
Query: 447 GFSFTPKNMTDSTNAESEGSQNPLLSSGSSPAFGKPAFGQATFGQVTSSQATPGQSAFGQ 506
GFSF N +T + G GS P G G Q T++ + QS+ G
Sbjct: 20 GFSFGQNNNNTNTQPSASGFG----FGGSQPNSGTATTGGFGANQATNTFGSNQQSSTGG 75
Query: 507 PAFG-LPTFGKPVSSQPT-SGQSAFGQPAFGEPAFGKPASSQPTSGQSAVGQPAFGQPAF 564
FG P G SS T SG +A G FG+ ++QP QS +G FG
Sbjct: 76 GLFGNKPALGSLGSSSTTASGTTATGTGLFGQ------QTAQPQ--QSTIGGGLFGNKPT 127
Query: 565 GEPA--FGKPASSQPTSGQSAFGQAAFGPPTFGKPASSQPTSGQPAFGQPAFGQPVSDQS 622
FG A + T+ FG + S+Q TS A G FG + +
Sbjct: 128 TTTGGLFGNSAQNNSTTSGGLFGNKVGSTGSLMGGNSTQNTSNMNAGG--LFGAKPQNTT 185
Query: 623 APSKPAFGKPTFGSTS----FGTQSQTNTT---SPLSEEAETSSVFGTPSFGST 669
A + FG GST+ FG+ +Q N T L +++ P G+T
Sbjct: 186 ATTGGLFGSKPQGSTTNGGLFGSGTQNNNTLGGGGLFGQSQQPQTNTAPGLGNT 239
>SPAC22G7.09c [YU] KOG0845 Nuclear pore complex Nup98 component (sc
Nup145/Nup100/Nup116)
Length = 425
Score = 53.9 bits (128), Expect = 2e-06
Identities = 86/320 (26%), Positives = 129/320 (39%), Gaps = 73/320 (22%)
Query: 463 SEGSQNPLLSSGSSPAFGKPAFGQATFGQVTSSQATPGQSAFGQPAFGLPTFGKPVSSQP 522
S G+QN ++G+S G F TFG T + TP + FG G FG+ ++P
Sbjct: 12 STGTQNQ--NTGTSAGTG--LFSSNTFGNNTQAN-TPASTGFGGVTGG--AFGQ---TKP 61
Query: 523 TSGQSAFGQPAFGEPAFGKPASSQPTSGQSAVGQPAFGQPAFGEPAFGKPASSQPTSGQS 582
+G S FG KP ++ T G + GQ Q A G FG ++++P +
Sbjct: 62 QTGGSLFGN---------KPNATSTTPGLNLFGQNP--QAAPGGSLFGA-STTKPQAPGG 109
Query: 583 AFGQAAFGPPTFGKPASSQPTSG--------------QPA------FGQPAFGQP--VSD 620
F Q T +PA + PT G QPA FGQ G + D
Sbjct: 110 LFNQNQ----TQAQPAQAAPTGGLFGLSGQNQTQSQTQPAQANTSLFGQSNIGTTGGLFD 165
Query: 621 QSAPSKPAFGK---------------PTFGSTSFGTQSQTNTT---SPLSEEAETSSVFG 662
Q+ P+ FG+ GST FG + T TT S ++ T+ +
Sbjct: 166 QNRPNTSTFGQFSTQPASAGLFGQSTQPSGSTGFGLSNNTQTTPFFSAAQQQPSTTQLPS 225
Query: 663 TPSFGSTS-FGIQGANVTSPF--GTNTKISSESSFGKSLFGTSQFGSDSAVTNPAPNSFA 719
P+ +T+ + AN T F + +I S+ + L ++ G+ S + PN A
Sbjct: 226 NPAINATTRYSSLNAN-TQKFLDDLDKEIFSQIQLAEEL--QTKLGTVSELVESVPNDVA 282
Query: 720 -TSAKLSSPFSAFATDQKTI 738
+LSS +A D I
Sbjct: 283 EVQRRLSSVSTALLIDSDEI 302
>CE23858 [YU] KOG3091 Nuclear pore complex p54 component (sc Nup57)
Length = 639
Score = 53.5 bits (127), Expect = 2e-06
Identities = 59/212 (27%), Positives = 86/212 (39%), Gaps = 37/212 (17%)
Query: 559 FGQPAFGEPAFGKPASSQPT-SGQSAFGQAAFGPPTFGKPASSQPTSGQPAFGQPAFGQP 617
FG + AF P + PT S + FG P FG A Q +S FG
Sbjct: 4 FGSSTPQKQAFTFPTPNAPTTSSGTLFGSTTPSKPLFGSTA--QASSTPSLFG------- 54
Query: 618 VSDQSAPSKPAFGKPTFGSTS-------FGTQSQTNTTSPLSEEAETSSVFGTPSFGSTS 670
++ S PS FGK +T+ FG T+T +P A T+ +FGT S +TS
Sbjct: 55 TTNTSTPSGGLFGKTGTSTTTTSTAGTLFGAAPTTSTATPSLFGASTTGLFGTSS--TTS 112
Query: 671 FGIQGANVTSPFGTNTKISSESSFGKSLFGTSQFGSDSAVTNPAPNSFATSAKL---SSP 727
G+ G T + + ++F G ++ P SFAT + L ++P
Sbjct: 113 GGLGGIGSTQQTAKSPVATRLAAFKSGTLGAGSLSGNT------PTSFATPSALPGTNAP 166
Query: 728 FSAFATDQKTIN--------PFET-QTSDPFG 750
S+F + +N P+ T S PFG
Sbjct: 167 QSSFLSPANNLNVAPAAYRPPYSTFGGSTPFG 198
>YOR098c [YU] KOG4719 Nuclear pore complex protein
Length = 1076
Score = 53.1 bits (126), Expect = 3e-06
Identities = 101/416 (24%), Positives = 151/416 (36%), Gaps = 63/416 (15%)
Query: 400 KIESGSSSMEKEKVTLISPQDTKNTITEVRKVPEQSSF-----FETTNSFAKGFSFTPKN 454
K + + + E ++ Q T VP + F +T S ++ F F +
Sbjct: 369 KTDKSTKTAEAPTLSFNFSQKANKTKAVDNTVPSTTLFNFGGKSDTVTSASQPFKFGKTS 428
Query: 455 MTDSTNAESEG---SQNPLLSSGSSPAFGKPAFGQATFGQVTSSQATPGQSAFGQPAFGL 511
+ ES+ S P+ S G G G + + +P F
Sbjct: 429 EKSENHTESDAPPKSTAPIFSFGKQEENGDE--GDDENEPKRKRRLPVSEDTNTKPLFD- 485
Query: 512 PTFGKPVSSQPTS-GQSAFGQPAFGEPAFGKPASSQPTSGQSAVGQPAFGQPAFGEPAFG 570
FGK + T G+S + A GKP+ S + A G P F FG
Sbjct: 486 --FGKTGDQKETKKGESE-------KDASGKPSFVFGASDKQAEGTPLF--------TFG 528
Query: 571 KPA---SSQPTSGQSAFGQAAFGPPTFGKPASSQPT-SGQPAFGQPAFGQPVSDQSAPSK 626
K A S+ +S Q FG+AA T KP+ + T +P F FGQ S+
Sbjct: 529 KKADVTSNIDSSAQFTFGKAATAKETHTKPSETPATIVKKPTF---TFGQSTSENKISEG 585
Query: 627 PAFGKPTFGSTSFGTQSQTNTTSPLSEEAETSSVFGTPSFGSTSFGIQGANVTSPFGTNT 686
A KPTF SF + +SP+S EA PSF SF + +V +P T
Sbjct: 586 SA--KPTF---SFSKSEEERKSSPISNEA------AKPSF---SFPGKPVDVQAPTDDKT 631
Query: 687 KISSESSFGKSLFGTSQFGSDSAVTNPAPNSFATSAKLSS---PFSAFATDQKTINPFET 743
+ S F S V+ P SF ++ +S P +F P +
Sbjct: 632 LKPTFS------FTEPAQKDSSVVSEPKKPSFTFASSKTSQPKPLFSFGKSDAAKEPPGS 685
Query: 744 QTS----DPFGHLNSKKEDTKSFNFTGFGESISEANHSLPSVTQDSLNSKEVSDST 795
TS P + K+ SF F G + + + PS + + S + + ST
Sbjct: 686 NTSFSFTKPPANETDKRPTPPSFTFGGSTTNNTTTTSTKPSFSFGAPESMKSTAST 741
>YLR335w_1 [YU] KOG4719 Nuclear pore complex protein
Length = 556
Score = 53.1 bits (126), Expect = 3e-06
Identities = 91/373 (24%), Positives = 153/373 (40%), Gaps = 82/373 (21%)
Query: 403 SGSSSMEKEKVTLISPQDTKNTITEVRKVPEQSSFFETTNSFAKGFSFTPKNMTDST--- 459
SG+ S + K+ + ++ K T T + SF T++ + S P ++T++T
Sbjct: 219 SGTVSSDVFKLNPSTDKNEKKTETNAKPF----SFSSATSTTEQTKSKNPLSLTEATKTN 274
Query: 460 ---NAESE-----GSQNPLLSSGSSPAFGKPAFGQA-----------TFGQVT------- 493
N+++E G+++ S + P+F FGQA TFG T
Sbjct: 275 VDNNSKAEASFTFGTKHAADSQNNKPSF---VFGQAAAKPSLEKSSFTFGSTTIEKKNDE 331
Query: 494 --SSQATPGQSAFGQPAFGLPTFGKPVSSQPTSGQSAFGQPAFGEPAFGKPASSQPTSGQ 551
+S + P +S+ + +F P + P + + +F +FG P K +S+P
Sbjct: 332 NSTSNSKPEKSSDSNDSNPSFSFSIPSKNTPDASKPSF---SFGVPNSSKNETSKPVFSF 388
Query: 552 SAVGQPAFG----------QPAFGEPAFG--KPASSQPTSGQSAFGQAAFGPPTFG-KPA 598
A A + +PAF A ++ + AF +FG
Sbjct: 389 GAATPSAKEASQEDDNNNVEKPSSKPAFNLISNAGTEKEKESKKDSKPAF---SFGISNG 445
Query: 599 SSQPTSGQPAFGQPAFGQPVSDQSAPSKPAFGKPTFGSTSFGTQSQTNTTSPLSEEAETS 658
S S +P+ G+ +D+ +KPAF SFG TNTT +A T
Sbjct: 446 SESKDSDKPSLPSAVDGE--NDKKEATKPAF--------SFGIN--TNTTKTADTKAPTF 493
Query: 659 SVFGTPSFGSTSFGIQGANVTSPFGTNTKISSES---SFGKSLFGTSQFGSDSAVTNPAP 715
+ FGS++ +V PF T + + SFGK+ T+ ++S+ T+PAP
Sbjct: 494 T------FGSSALADNKEDVKKPFSFGTSQPNNTPSFSFGKT---TANLPANSS-TSPAP 543
Query: 716 NSFATSAKLSSPF 728
+ +T K S PF
Sbjct: 544 SIPSTGFKFSLPF 556
>ECU02g0460 [YU] KOG0845 Nuclear pore complex Nup98 component (sc
Nup145/Nup100/Nup116)
Length = 620
Score = 52.8 bits (125), Expect = 4e-06
Identities = 90/319 (28%), Positives = 119/319 (37%), Gaps = 45/319 (14%)
Query: 442 NSFAKGFSFTPKNMTDSTNAESEGSQNPLLSSGSSPAFG--KPAFGQATFGQV--TSSQA 497
N F F D+ + G+Q P + S FG + F Q + G T S
Sbjct: 12 NKFFNSSFFAQTPQKDNKQGQFSGAQQPSIFGQSQAGFGSAQNPFLQGSGGMKSNTFSGV 71
Query: 498 TP--GQSAFGQ-PAFGLPTFGKPVS--SQPTSGQSAFGQ---PAFGEPAFGKPASSQPTS 549
TP G S+FG A FG+P S QP++ + FG P+ G FG TS
Sbjct: 72 TPFGGTSSFGSGAASSSGGFGQPFSGQQQPSTSLARFGSGGTPSTGSNIFG------GTS 125
Query: 550 GQSAVGQPAFGQPAFGEPAFGKPASSQPTSGQSAFG-QAAFGPPTFGKPASSQPTS-GQP 607
GQ FG G FG +QP S A G Q P T G +SQP+ GQ
Sbjct: 126 NALGTGQTQFGGTG-GTMNFG----AQPQSSVFASGAQNGLQPFTMGGSTASQPSIWGQG 180
Query: 608 AFGQPAFGQPVSDQSAPSKPAFGK--PTFGSTSFGTQSQTNTTSPLSE----EAETSSVF 661
+ FG S S K P +S GT+ + E E +
Sbjct: 181 STSYSPFGGTQSTFSNDRNSTLNKTFPGLAGSSTGTKDHPYIQRKIREDNGGEVTLMHIN 240
Query: 662 GTPSF--------GSTSFGIQGANVTSPFGTNTKISSESSFGKSLFGTSQFGSDSAVTNP 713
G ++ S + + +TS G+ T+ S S FG L SAV P
Sbjct: 241 GNENYTQKSVEELRSEDYMLGRKPMTS--GSMTEPKSISGFGLPLGAAM---PSSAVNKP 295
Query: 714 APNS-FATSAKLSSPFSAF 731
NS F T+A + F F
Sbjct: 296 QGNSVFGTAATSGTSFQPF 314
>CE17939 [U] KOG0864 Ran-binding protein RANBP1 and related RanBD domain
proteins
Length = 860
Score = 52.8 bits (125), Expect = 4e-06
Identities = 74/260 (28%), Positives = 101/260 (38%), Gaps = 49/260 (18%)
Query: 506 QPAFGLP--TFGKPVSS---QPTSGQSAFGQPAFGEPAFGKPASSQPTSGQSAVGQPAFG 560
QPA G P TFG S+ +P + S FG G P+ SS G + G FG
Sbjct: 480 QPAPGTPKVTFGFGASAPAKEPLAQTSQFGGSLSGSPS----TSSSIFGGGTPKGTSVFG 535
Query: 561 QPAFGEP--AFGKPASS-QPTSGQSAFGQAAFGPPTFGKPASSQPTSGQPAFGQPAFGQP 617
A P +F KPA++ T+ F A + PA+S T G FG +
Sbjct: 536 GGAANTPTFSFNKPAAAVNATTPSFNFNNPA---ASTASPATST-TPGNSLFGG-GLSKT 590
Query: 618 VSDQSAPSKP----------AFGKPTFGSTSFGTQSQTNTTSPLSEEAETSSVFGTPSFG 667
S S+ + P AF KPTF SFG Q +TT+P +E S
Sbjct: 591 ESTASSTTTPSFMFAKNSESAFPKPTF---SFGKQQTPSTTAPAKQEENKQS-------- 639
Query: 668 STSFGIQGANVTSPFGTNTKISSESSFGKSLFGTSQFGSDSAVTNPAPNSFATSAKLSSP 727
T + G+ TS T +S+ S+ S+F D+A A A K
Sbjct: 640 ETPKSVFGSGFTSGGATFAALSANSAKSGSIF-------DAANVKKAQEELAAQKKA--- 689
Query: 728 FSAFATDQKTINPFETQTSD 747
S F + T+N + D
Sbjct: 690 -SIFGSKNTTLNTTSATSHD 708
>YKR092c [Y] KOG2992 Nucleolar GTPase/ATPase p130
Length = 406
Score = 52.4 bits (124), Expect = 5e-06
Identities = 60/314 (19%), Positives = 122/314 (38%), Gaps = 13/314 (4%)
Query: 543 ASSQPTSGQSAVGQPAFGQPAFGEPAFGKPASSQPTSGQSAFGQAAFGPPTFGKPASSQP 602
+SS +SG+S+ + + + + + S +S S+ ++ + S
Sbjct: 43 SSSSSSSGESSSSSSSSSSSSSSDSSDSSDSESSSSSSSSSSSSSS------SSDSESSS 96
Query: 603 TSGQPAFGQPAFGQPVSDQSAPSKPAFGKPTFGSTSFGTQSQTNT----TSPLSEEAETS 658
S + G + SD+S+ + + + + T T P S + S
Sbjct: 97 ESDSSSSGSSSSSSSSSDESSSESESEDETKKRARESDNEDAKETKKAKTEPESSSSSES 156
Query: 659 SVFGTPSFGSTSFGIQGANVTSPFGTNTKISSESSFGKSLFGTSQFGSDSAVTNPAPNSF 718
S G+ S + G + + +S +++ S S S +S SDS+ + + +S
Sbjct: 157 SSSGSSSSSESESGSESDSDSSSSSSSSSDSESDSESDSQSSSSSSSSDSSSDSDSSSSD 216
Query: 719 ATSAKLSSPFSAFATDQKTINPFETQTSDPFGHLNSKKEDTKSFNFTGFGESISEANHSL 778
++S SS S+ ++ + + SD G +S S + + +S S+++
Sbjct: 217 SSSDSDSSSSSSSSSSDSDSDSDSSSDSDSSGSSDSSSSSDSSSDESTSSDS-SDSDSDS 275
Query: 779 PSVTQDSLNSKEVSDSTIENDQSEVPSPANXXXXXXXXXXXXXNIVSSTDESDSLYGEDR 838
S + L +KE + + +++ S + NI + TDE G+ +
Sbjct: 276 DSGSSSELETKEATADESKAEETPASSNESTPSASSSSSANKLNIPAGTDEIKE--GQRK 333
Query: 839 EIYDNDRSDIHIEA 852
DRS I+ EA
Sbjct: 334 HFSRVDRSKINFEA 347
>Hs19923191 [UD] KOG1860 Nuclear protein export factor
Length = 1980
Score = 52.0 bits (123), Expect = 7e-06
Identities = 68/233 (29%), Positives = 91/233 (38%), Gaps = 27/233 (11%)
Query: 467 QNPLLSSGSSPAFGKPAFGQATFGQVTSSQATPG--QSAFGQPAFGLPTFGKPVSSQPTS 524
QN LS SS +F ++ +SS T G Q++ P GL V++ S
Sbjct: 41 QNSTLSGKSSGFSQVSSFPASSGVSHSSSVQTLGFTQTSSVGPFSGLEHTSTFVATSGPS 100
Query: 525 GQSAFGQPAFGEPAFGKPASSQPTSGQSAVGQPA-------FGQPAFG----EPAFGKP- 572
S G F +F P S SA GQ A FG+ F E A KP
Sbjct: 101 SSSVLGNTGF---SFKSPTSVGAFPSTSAFGQEAGEIVNSGFGKTEFSFKPLENAVFKPI 157
Query: 573 --ASSQPTSGQSAFGQAAFGPPTFGKPASSQPTSGQPAFGQPAFGQPVSDQSAPSKPAFG 630
A S+P QS Q A G TF P SS P P +F Q S + S F
Sbjct: 158 LGAESEPEKTQS---QIASGFFTFSHPISSAPGGLAPF----SFPQVTSSSATTSNFTFS 210
Query: 631 KPTFGSTSFGTQSQTNTTSPLSEEAE-TSSVFGTPSFGSTSFGIQGANVTSPF 682
KP + S + + + EE S+FG+ + +SF + A + PF
Sbjct: 211 KPVSSNNSLSAFTPALSNQNVEEEKRGPKSIFGSSNNSFSSFPVSSAVLGEPF 263
>SPBC1711.05 [Y] KOG2992 Nucleolar GTPase/ATPase p130
Length = 451
Score = 51.6 bits (122), Expect = 9e-06
Identities = 67/255 (26%), Positives = 114/255 (44%), Gaps = 20/255 (7%)
Query: 616 QPVSDQSAPSKPAFGKPTFGSTSFGTQSQTNTTSPLSEEAETSSVFGTPSFGSTSFGIQG 675
Q +S + AP + A S + G+ S ++ + S E+E+SS S S+ +
Sbjct: 84 QKISKKGAPPEKAHSS----SEASGSGSSSDESDSSSSESESSSEDNDSSSSSSDSESES 139
Query: 676 ANVTSPFGTNTKIS-SESSFGKSLFGTSQFGSDSAVTNPAPNSFATSAKLSSPFSAFATD 734
++ S +++ S SESS S +S S+S ++ +S ++S+ S S+ +D
Sbjct: 140 SSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSD 199
Query: 735 QKTINPFETQTSDPFGHLNSKKEDTKSFNFTGFGESISEANHSLPSVTQ-DSLNSKEVSD 793
+ +SD +S+ D+ S + + ES SE N S S + +S +S E SD
Sbjct: 200 SSS------SSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSD 253
Query: 794 STIE--NDQSEVPSPANXXXXXXXXXXXXXNIVSSTDESDSLYGEDREIYDNDRSDIHIE 851
S+ + +SE S + SS+D SDS E D+D + +
Sbjct: 254 SSSSSSDSESESSSKDSDSSSNSSDSEDD----SSSDSSDSESESSSE--DSDSTSSSSD 307
Query: 852 ASSKPSSTVLNSNSD 866
+ S SS NSN+D
Sbjct: 308 SDSSSSSEDGNSNTD 322
>CE29051 [A] KOG0335 ATP-dependent RNA helicase
Length = 1016
Score = 51.6 bits (122), Expect = 9e-06
Identities = 63/214 (29%), Positives = 83/214 (38%), Gaps = 27/214 (12%)
Query: 435 SSFFETTNSFAKGFSFTPKNMTDSTNAESEGSQNPLLSSGSSPAFG----------KPAF 484
S+ FE ++S F K +T G + SGS FG KP
Sbjct: 305 SAGFEASSSNESAFGQQSKGFGGATKNGFGGDSSSSFGSGSKAGFGGTSSSGIGGQKPGA 364
Query: 485 GQATFGQVTSSQATPGQSAFGQPAFGLPT---FGKPVSSQPTSGQSAFGQPAFGEPAFGK 541
+++ G T +T G FG G PT FG P ++ +SGQ G + FG
Sbjct: 365 TESS-GFPTKETSTSG-GTFGSGFGGKPTSTGFGAPSTTDSSSGQQTAGFGGASKLGFGG 422
Query: 542 PASSQPTSGQSAVGQPAFGQPAFGEPAFGKPASSQPTSGQSAFGQAA--FGPPT---FGK 596
+S + FG P+ G ASS S +SAFGQ + FG T FG
Sbjct: 423 HRASTAKNSGLPTETTGFGGKL---PSAGFGASS---SNESAFGQQSKGFGGATKNGFGG 476
Query: 597 PASSQPTSGQPAFGQPAFGQPVSDQSAPSKPAFG 630
+S+ FG P Q D APSK G
Sbjct: 477 DSSNSFGKRDSGFGGPQ-DQGFGDTDAPSKSGLG 509
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.308 0.125 0.338
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,953,450
Number of Sequences: 60738
Number of extensions: 3623214
Number of successful extensions: 16495
Number of sequences better than 1.0e-05: 40
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 15195
Number of HSP's gapped (non-prelim): 309
length of query: 1465
length of database: 30,389,216
effective HSP length: 119
effective length of query: 1346
effective length of database: 23,161,394
effective search space: 31175236324
effective search space used: 31175236324
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)