ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI1202 good K KOG0051 Transcription RNA polymerase I termination factor, Myb superfamily
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI1202 419265 421049 595
(595 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YDR026c [K] KOG0051 RNA polymerase I termination factor Myb supe... 343 6e-94
YBR049c [K] KOG0051 RNA polymerase I termination factor Myb supe... 302 8e-82
SPBC1198.11c [K] KOG0051 RNA polymerase I termination factor Myb... 134 3e-31
SPAC22F8.07c [K] KOG0051 RNA polymerase I termination factor Myb... 99 2e-20
Hs10863947 [K] KOG0051 RNA polymerase I termination factor Myb s... 70 9e-12
At5g41020 [K] KOG0051 RNA polymerase I termination factor Myb su... 58 4e-08
At5g02320 [K] KOG0048 Transcription factor Myb superfamily 57 8e-08
At5g40360 [K] KOG0048 Transcription factor Myb superfamily 57 1e-07
At3g09370 [K] KOG0048 Transcription factor Myb superfamily 53 1e-06
At4g18770 [K] KOG0048 Transcription factor Myb superfamily 53 1e-06
At5g40430 [K] KOG0048 Transcription factor Myb superfamily 50 7e-06
At1g34670 [K] KOG0048 Transcription factor Myb superfamily 50 7e-06
Hs4885497_1 [K] KOG0048 Transcription factor Myb superfamily 50 1e-05
Hs13641706_1 [K] KOG0048 Transcription factor Myb superfamily 50 1e-05
>YDR026c [K] KOG0051 RNA polymerase I termination factor Myb superfamily
Length = 570
Score = 343 bits (879), Expect = 6e-94
Identities = 218/591 (36%), Positives = 292/591 (48%), Gaps = 72/591 (12%)
Query: 4 NDTNHESVEEAVFKYVGVGLEK--SGEDDAVNKQKS---------------VDWFLKEXX 46
N+ ESVEEAV +YVGV L+ + KQK +DW+LK
Sbjct: 15 NNDPKESVEEAVLRYVGVDLKNHIKKTKKKLKKQKKRKHGSKMSHEDEDTDMDWYLKTSG 74
Query: 47 XXXXXX-------XXXXXXXXXXXNAKHRDANDVSXXXXXXXXXXLSVKKRGRPSEQXXX 99
N+ R+ + S K R R S +
Sbjct: 75 SKDLRKVDDIEPNSVAVAAVAAAYNSSMREKDKRSCHKKSSNSRSERKKHRKRKSSKERK 134
Query: 100 XXXXXXXXXXXXXXXXXXXXXXXLHLAAVDPELASLDDNLVDGNDSEEQSHHQLVHKAIM 159
+DP+L +LDD + + + +
Sbjct: 135 AKIKM----------------------VLDPQLTTLDDGITTTAFLPDDLIAETAFDKYV 172
Query: 160 DTDNI-ASQHPDFQQYLNTEDDQEPKKEKSEE--RSYGDLSNIXXXXXXXXXXXXIPSQV 216
DT+ ++HP +N +D + S R Y DL I IP
Sbjct: 173 DTEKAYLAKHPSKSLEVNEDDKENNFNNNSSTLVRIYTDLEGIPNDGSYIKRTPKIP--- 229
Query: 217 RLKKTAEVLPKVLSSESHNDDQQDDVSNLIQEAAAKASHIINPATQSNGKSFDESEEEAL 276
+K + +L+ E +N D + L++ KAS I T+S GK F SEE AL
Sbjct: 230 --EKDVKSDDLILAPEENNGD-----TALLRSDIVKASVIDGAITKSIGKKFTPSEENAL 282
Query: 277 EQFIKEYQKIRGLSRRQICERIWSNERR-KDDFWTNICRVLPYRTRSSIYKHVRRKYHIF 335
+QFI+EY KIRGL RRQ+CERIWS + +D FW NI +VLPYRTRSSIYKH+RRKYHIF
Sbjct: 283 DQFIEEYMKIRGLDRRQMCERIWSTDGVIRDGFWANISKVLPYRTRSSIYKHIRRKYHIF 342
Query: 336 EQRGKWTPEEDAELARWCAEKEGQWSNIGKVLGRMPEDCRDRWRNYVKCGPNRAANKWSV 395
EQRGKWTPEED ELAR C EKEG W+ +GK+LGRMPEDCRDRWRNY+KCG R + +WS
Sbjct: 343 EQRGKWTPEEDQELARLCLEKEGHWTEVGKLLGRMPEDCRDRWRNYMKCGSKRGSKRWSK 402
Query: 396 EEEEKLKNVIHQMLDNASTAYEDGEDDEMKDSSTKIEDSGDADMLDVQXXXXXXXXXXXX 455
EEEE L V+++M++ A + MK +E + D + Q
Sbjct: 403 EEEELLTTVVNEMIEEAH------QYQRMK----ALEAANKNDRYN-QMYSRGPKGKRIS 451
Query: 456 XXXXXXDIINWTVVSEQMGGSRSRIQCRYKWNKLLKKEALNKIKNISDDDKFWLLTKLRD 515
D+INWTVVSE+M G+RSRIQCRYKWNKL+ EA + +I ++ WLL +L+
Sbjct: 452 DNPTFKDMINWTVVSERMSGTRSRIQCRYKWNKLVTDEAARSMLSIPVSERKWLLERLKQ 511
Query: 516 MGFTEDSQVDWEELSTLMPGRRWTGTELKLLYEKVRTTVRQYK-RKTINVI 565
+ T S +DW ++T PG TG EL+L YE++R + +K R T +I
Sbjct: 512 LPKTSYSNIDWNSIATYKPGYPRTGLELRLCYEQMREKIHDFKGRSTAEII 562
>YBR049c [K] KOG0051 RNA polymerase I termination factor Myb superfamily
Length = 810
Score = 302 bits (774), Expect = 8e-82
Identities = 169/349 (48%), Positives = 219/349 (62%), Gaps = 46/349 (13%)
Query: 128 VDPELASLDDNLVDGNDSEEQ--SHHQLVHKAIMDTDNIASQHPDFQQYLNTE---DDQE 182
VDPEL +L D D ND+ QLVHKAI+D D+I +QHPDFQQYLNT DD E
Sbjct: 225 VDPELTTLGD--ADDNDTNNDVIDRDQLVHKAIIDADSI-TQHPDFQQYLNTAADTDDNE 281
Query: 183 PKKEKSEE--RSYG-------------DLSNIXXXXXXXXXXXXIPSQVRLKKT-AEVLP 226
K + R++G DLSN + S + + EVLP
Sbjct: 282 KLKHIKDHLMRTHGLNHQNKNHNDDTDDLSNSTKQYSELQKDSMLDSSLNKSRNYMEVLP 341
Query: 227 KVLS---------SESHNDD----QQDDVSNLIQEAAAKASHIINPATQS---------N 264
KV+S S SH+++ ++S L+Q AA KAS +++ ++ S N
Sbjct: 342 KVISQDTQPHQQKSPSHDNEAGSVDNSEISQLLQSAATKASSLVSLSSSSATPSTSRSNN 401
Query: 265 GKSFDESEEEALEQFIKEYQKIRGLSRRQICERIWSNERRKDDFWTNICRVLPYRTRSSI 324
K+FD++E+ ALE+FI EY+ I L+R+Q+CERIWS++R KD+FW NI +VLPYR+ SSI
Sbjct: 402 SKAFDKAEDAALERFINEYEAIERLTRQQVCERIWSSDRPKDNFWNNIYKVLPYRSSSSI 461
Query: 325 YKHVRRKYHIFEQRGKWTPEEDAELARWCAEKEGQWSNIGKVLGRMPEDCRDRWRNYVKC 384
YKH+RRKYHIFEQRGKWT EE+ ELA+ CAEKEGQW+ IGK LGRMPEDCRDRWRNYVKC
Sbjct: 462 YKHMRRKYHIFEQRGKWTAEEEQELAKLCAEKEGQWAEIGKTLGRMPEDCRDRWRNYVKC 521
Query: 385 GPNRAANKWSVEEEEKLKNVIHQMLDNASTAYEDGEDDEMKDSSTKIED 433
G NRA+N+WSVEEEE LK VI ML+ A + +++ ++D
Sbjct: 522 GTNRASNRWSVEEEELLKKVISDMLEEAQQQQSQLHPNLLEEEQHLLQD 570
Score = 160 bits (405), Expect = 5e-39
Identities = 72/121 (59%), Positives = 95/121 (78%)
Query: 462 DIINWTVVSEQMGGSRSRIQCRYKWNKLLKKEALNKIKNISDDDKFWLLTKLRDMGFTED 521
DIINWT+VSE+MGG+RSRIQCRYKWNKL+K+EA+ KI+ + DDD W+ KLRD+G TED
Sbjct: 689 DIINWTIVSERMGGTRSRIQCRYKWNKLVKREAIAKIQTVKDDDMLWIFEKLRDLGITED 748
Query: 522 SQVDWEELSTLMPGRRWTGTELKLLYEKVRTTVRQYKRKTINVICKELVGYPEASLPLDD 581
SQVDW+EL+ L PG + G ELKL YE+++ V+ YK+K+IN I KELV Y +++ +
Sbjct: 749 SQVDWDELAALKPGMKLNGLELKLCYERMKKKVKGYKQKSINEISKELVDYFSSNISMKT 808
Query: 582 E 582
E
Sbjct: 809 E 809
>SPBC1198.11c [K] KOG0051 RNA polymerase I termination factor Myb superfamily
Length = 504
Score = 134 bits (338), Expect = 3e-31
Identities = 87/298 (29%), Positives = 139/298 (46%), Gaps = 56/298 (18%)
Query: 263 SNGKS-FDESEEEALEQFIKEYQKIRGLSRRQICERIWSNERRKDD--FWTNICRVLPYR 319
S+G+ F E + Q + + +G S Q C +IW+ + K F++N+ + L +R
Sbjct: 235 SSGRGDFGVQETAIISQEVHNFIMDQGWSEYQFCNQIWAGKCPKTIRMFYSNLYKKLSHR 294
Query: 320 TRSSIYKHVRRKYHIFEQRGKWTPEEDAELARWCAEKEGQWSNIGKVLGRMPEDCRDRWR 379
SIY HVRR Y+ FE R W+ EED EL + E W+ IG+ + RMP DCRDRWR
Sbjct: 295 DAKSIYHHVRRAYNPFEDRCVWSKEEDEELRKNVVEHGKCWTKIGRKMARMPNDCRDRWR 354
Query: 380 NYVKCGPNRAANKWSVEEEEKLKNVIHQMLDNASTAYEDGEDDEMKDSSTKIEDSGDADM 439
+ V+ G N WS+EEE +L ++ ++ + ED D
Sbjct: 355 DVVRFGDKLKRNAWSLEEETQLLQIVAELRNR-----EDLSSD----------------- 392
Query: 440 LDVQXXXXXXXXXXXXXXXXXXDIINWTVVSEQMGGSRSRIQCRYKWNKLLKKEALNKIK 499
INWT+V+ QM G+R+R+QCRYK+ +L K + +++
Sbjct: 393 ------------------------INWTLVA-QMLGTRTRLQCRYKFQQLTKAASKFELQ 427
Query: 500 NISDDDKFWLLTKLRDMGFTEDSQVDWEELSTLMPGRRWTGTELKLLYEKVRTTVRQY 557
+ WLL ++ D ++ WE + G RWT ++ + ++ + Y
Sbjct: 428 -----ENVWLLERIYDSLLNNGGKIHWENIVKEANG-RWTRDQMLFQFINLKKMIPSY 479
>SPAC22F8.07c [K] KOG0051 RNA polymerase I termination factor Myb superfamily
Length = 496
Score = 98.6 bits (244), Expect = 2e-20
Identities = 73/283 (25%), Positives = 125/283 (43%), Gaps = 71/283 (25%)
Query: 290 SRRQICERIWSNERRKDDFWT--NICRVLPYRTRSSIYKHVRRKYHIFEQRGKWTPEEDA 347
S Q + +WS+ R D+ T N L R + SIY ++RRKY+ F+++ KWT E++A
Sbjct: 222 SDEQFLQYVWSDNHR-DEMKTLYNCLYELIDRDKKSIYNYLRRKYNPFKKKCKWTIEDEA 280
Query: 348 ELARWCAEKEGQWSNIGKVLGRMPEDCRDRWRNYVKCGP-NRAANKWSVEEEEKLKNVIH 406
EL + + WS IGK+ R+P CRD WR+Y++ G NR + W+++E+EKL ++
Sbjct: 281 ELKKLVEKHGTSWSLIGKLSNRLPMHCRDHWRDYIQPGEINR--SPWTIQEKEKLIKTVN 338
Query: 407 QMLDNASTAYEDGEDDEMKDSSTKIEDSGDADMLDVQXXXXXXXXXXXXXXXXXXDIINW 466
Q L + ++ I W
Sbjct: 339 QYLQSNPSS-----------------------------------------------PIQW 351
Query: 467 TVVSEQMGGSRSRIQCRYKWNKLLKKEALNKIKNISDDDKFWLLT--------------- 511
+++S+ M +R R CR+K+ L+ ++ N D WL+
Sbjct: 352 SLISKNM-RNRHRHHCRWKYYTLISRDIHNS-SPFKLGDSIWLIERYSNYKILNKKLIKF 409
Query: 512 KLRDMGFTEDSQVDWEELSTLMPGRRWTGTELKLLYEKVRTTV 554
++ D+ E+ +DW+ LS WT K +E+++ T+
Sbjct: 410 RMMDLNVAEERMIDWKCLSE-YANHLWTADACKSHFERIKKTL 451
>Hs10863947 [K] KOG0051 RNA polymerase I termination factor Myb superfamily
Length = 760
Score = 70.1 bits (170), Expect = 9e-12
Identities = 73/306 (23%), Positives = 127/306 (40%), Gaps = 61/306 (19%)
Query: 236 DDQQDDVSNLIQEAAAKASH-----------IINPATQSNGKSFDESEEEALEQFIKEYQ 284
++Q D++S L E + S + N + + + E + L I+ Y
Sbjct: 113 NEQLDEISPLGNEEVSAVSQAWFTTKEDKDSLTNKGHKWKQGMWSKEEIDILMNNIERYL 172
Query: 285 KIRGLSRRQICERIWSNERRKDDFWTNICRVLPYRTRSSIYKHVRRKYHIFEQRGKWTPE 344
K RG+ S + RKD F+ I L R ++Y+ V R Y GK+TPE
Sbjct: 173 KARGIKDATEIIFEMSKDERKD-FYRTIAWGLN-RPLFAVYRRVLRMYDDRNHVGKYTPE 230
Query: 345 EDAELARWCAEKEGQWSNIGKVLGRMPEDCRDRWRNYVKCGPNRAANKWSVEEEEKLKNV 404
E +L + W+ IG LGR +DR R +K N KW+ EEE++L V
Sbjct: 231 EIEKLKELRIKHGNDWATIGAALGRSASSVKDRCR-LMKDTCN--TGKWTEEEEKRLAEV 287
Query: 405 IHQMLDNASTAYEDGEDDEMKDSSTKIEDSGDADMLDVQXXXXXXXXXXXXXXXXXXDII 464
+H++ T+ E G+ I G +
Sbjct: 288 VHEL-----TSTEPGD----------IVTQG----------------------------V 304
Query: 465 NWTVVSEQMGGSRSRIQCRYKWNKLLKKEALNKIKNISDDDKFWLLTKLRDMGFTEDSQV 524
+W V+E++ G+RS QCR KW L + + + +D+ L+ ++ ++ +++ +
Sbjct: 305 SWAAVAERV-GTRSEKQCRSKWLNYLNWKQSGGTE-WTKEDEINLILRIAELDVADENDI 362
Query: 525 DWEELS 530
+W+ L+
Sbjct: 363 NWDLLA 368
>At5g41020 [K] KOG0051 RNA polymerase I termination factor Myb superfamily
Length = 588
Score = 58.2 bits (139), Expect = 4e-08
Identities = 81/398 (20%), Positives = 144/398 (35%), Gaps = 83/398 (20%)
Query: 175 LNTEDDQEPKKEKSEERSYGDLSNIXXXXXXXXXXXXIPS----QVRLKKTAEVLPKVLS 230
LN+ D + +++K +++ ++S PS +V+ E P
Sbjct: 230 LNSTKDAKKRRKKKKKKKQSEVSEAEEKSDKSDEDLTTPSTSSKRVKFSDQVEFFPSD-D 288
Query: 231 SESHNDDQQDDVSNLIQEAAAKASHIINPATQSNGKSFDESEEEALEQFIKEYQKIRGLS 290
E DD +++V + GK F + E+E ++ + EY L
Sbjct: 289 DEGTEDDDEEEVKVV------------------RGKRFTKEEDEMVKNAVLEYIDNHALG 330
Query: 291 RRQI-----CERIWSNERRKDDFWTNICRVLPYRTRSSIYKHVRRKYHIFE--QRGKWTP 343
I C+ + W I LP+RT +S+Y R + IFE +G WT
Sbjct: 331 DEGIKMVMECKAY----PQLKGCWKEITSALPWRTYNSVY---HRAHTIFEAGSQGIWT- 382
Query: 344 EEDAELARWCAEKEGQ-WSNIGKVLGRMPEDCRDRWRNYVKCGPNRAANKWSVEEEEKLK 402
+ED EL + G W + +G+ + +D WR G + W EE + L
Sbjct: 383 KEDIELVMEFQKTHGNDWKTLADAMGKHRKHVKDAWRRGRLAGKKK--GHWMREEYQNLF 440
Query: 403 NVIHQMLDNASTAYEDGEDDEMKDSSTKIEDSGDADMLDVQXXXXXXXXXXXXXXXXXXD 462
+++++ L + + + +KD+
Sbjct: 441 DLVNKDLRMKAFKEKHSKHGMLKDN----------------------------------- 465
Query: 463 IINWTVVSEQMGGSRSRIQCRYKWNKLLKKEALNKIKNISDDDKFWLLTKLRDMGFTEDS 522
I W +S+ + +R + C KW + L + K + DD + LL +L +
Sbjct: 466 -IPWMAISDVL-ETRDHVTCCQKWYEQLISPMVAKGMWANVDD-YRLLEELLKLDAACID 522
Query: 523 QVDWEELSTLMPG----RRWTGTELKLLYEKVRTTVRQ 556
VDW+ L G +RW + + K +T Q
Sbjct: 523 DVDWDNLLENRDGEACRKRWNQMIIHIGVPKSKTFAEQ 560
>At5g02320 [K] KOG0048 Transcription factor Myb superfamily
Length = 529
Score = 57.0 bits (136), Expect = 8e-08
Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 302 ERRKDDFWTNICRVLPYRTRSSIYKHVRRKYHIFEQRGKWTPEEDAELARWCAEKEG--Q 359
E+ K W I P RT ++ + +G WT EED ++ +K G +
Sbjct: 72 EKYKGKRWKKIAEFFPERTEVQCLHRWQKVLNPELVKGPWTQEEDDKIVE-LVKKYGPAK 130
Query: 360 WSNIGKVL-GRMPEDCRDRWRNYVKCGPNRAANKWSVEEEEKLKNVIHQMLDN 411
WS I K L GR+ + CR+RW N++ G + A W+VEEE L N H+M N
Sbjct: 131 WSVIAKSLPGRIGKQCRERWHNHLNPGIRKDA--WTVEEESALMN-SHRMYGN 180
>At5g40360 [K] KOG0048 Transcription factor Myb superfamily
Length = 267
Score = 56.6 bits (135), Expect = 1e-07
Identities = 30/79 (37%), Positives = 49/79 (61%), Gaps = 5/79 (6%)
Query: 338 RGKWTPEEDAELARWCAEKEGQ-WSNIGKVL-GRMPEDCRDRWRNYVKCGPNRAANKWSV 395
+G+WTP ED L R K + W++I K+ GR+ + CR+RW N+++ PN N WS
Sbjct: 66 KGQWTPTEDELLVRMVKSKGTKNWTSIAKMFQGRVGKQCRERWHNHLR--PNIKKNDWS- 122
Query: 396 EEEEKLKNVIHQMLDNAST 414
EEE+++ +H+++ N T
Sbjct: 123 EEEDQILIEVHKIVGNKWT 141
>At3g09370 [K] KOG0048 Transcription factor Myb superfamily
Length = 496
Score = 53.1 bits (126), Expect = 1e-06
Identities = 35/102 (34%), Positives = 51/102 (49%), Gaps = 6/102 (5%)
Query: 305 KDDFWTNICRVLPYRTRSSIYKHVRRKYHIFEQRGKWTPEEDAELARWCAEKEG--QWSN 362
K W NI + P RT ++ + +G WT EED ++ EK G +WS
Sbjct: 88 KGKSWKNIAKSFPDRTEVQCLHRWQKVLNPDLIKGPWTHEEDEKIVE-LVEKYGPAKWSI 146
Query: 363 IGKVL-GRMPEDCRDRWRNYVKCGPNRAANKWSVEEEEKLKN 403
I + L GR+ + CR+RW N++ N+ A W+ EEE L N
Sbjct: 147 IAQSLPGRIGKQCRERWHNHLNPDINKDA--WTTEEEVALMN 186
>At4g18770 [K] KOG0048 Transcription factor Myb superfamily
Length = 427
Score = 52.8 bits (125), Expect = 1e-06
Identities = 35/103 (33%), Positives = 59/103 (56%), Gaps = 10/103 (9%)
Query: 312 ICRVLPYRTRSSIYKHVRRKYHIFEQRGKWTPEEDAELARWCAEKEG--QWSNIGKVL-G 368
+ R L + SS +K ++ + +G+WT EED L + EK G +WS+I +VL G
Sbjct: 194 LTRKLSSSSSSSSWKETKKSTLV---KGQWTAEEDRVLIQ-LVEKYGLRKWSHIAQVLPG 249
Query: 369 RMPEDCRDRWRNYVKCGPNRAANKWSVEEEEKLKNVIHQMLDN 411
R+ + CR+RW N+++ P+ WS EEE+++ H+ + N
Sbjct: 250 RIGKQCRERWHNHLR--PDIKKETWS-EEEDRVLIEFHKEIGN 289
>At5g40430 [K] KOG0048 Transcription factor Myb superfamily
Length = 431
Score = 50.4 bits (119), Expect = 7e-06
Identities = 24/71 (33%), Positives = 41/71 (56%), Gaps = 4/71 (5%)
Query: 340 KWTPEEDAELARWCAEKEGQWSNIGKVL-GRMPEDCRDRWRNYVKCGPNRAANKWSVEEE 398
+WT ED +L A + +W+ + K GR P+ CR+RW N+ + PN WS EEE
Sbjct: 231 RWTESEDIKLKEMVALEPKKWTKVAKHFEGRTPKQCRERWHNHAR--PNVKKTTWS-EEE 287
Query: 399 EKLKNVIHQML 409
+++ +H+++
Sbjct: 288 DQILIEVHKVI 298
>At1g34670 [K] KOG0048 Transcription factor Myb superfamily
Length = 365
Score = 50.4 bits (119), Expect = 7e-06
Identities = 32/97 (32%), Positives = 54/97 (54%), Gaps = 10/97 (10%)
Query: 337 QRGKWTPEEDAELARWCAEK-EGQWSNIGKV--LGRMPEDCRDRWRNYVKCGPNRAANKW 393
++G WTPEED +L + + G W + K+ L R + CR RW NY++ P+ K+
Sbjct: 13 KKGPWTPEEDQKLIDYIHKHGHGSWRALPKLADLNRCGKSCRLRWTNYLR--PDIKRGKF 70
Query: 394 SVEEEEKLKNVIHQMLDN----ASTAYEDGEDDEMKD 426
S EEE+ + + +H +L N +T + D+E+K+
Sbjct: 71 SAEEEQTILH-LHSILGNKWSAIATHLQGRTDNEIKN 106
>Hs4885497_1 [K] KOG0048 Transcription factor Myb superfamily
Length = 394
Score = 50.1 bits (118), Expect = 1e-05
Identities = 36/113 (31%), Positives = 54/113 (46%), Gaps = 7/113 (6%)
Query: 302 ERRKDDFWTNICRVLPYRTRSSIYKHVRRKYHIFEQRGKWTPEEDAELARWCAEKEG--Q 359
E+ D W I LP RT ++ + +G WT EED + +K G +
Sbjct: 56 EQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQRVIE-LVQKYGPKR 114
Query: 360 WSNIGKVL-GRMPEDCRDRWRNYVKCGPNRAANKWSVEEEEKLKNVIHQMLDN 411
WS I K L GR+ + CR+RW N++ P W+ EEE+++ H+ L N
Sbjct: 115 WSVIAKHLKGRIGKQCRERWHNHL--NPEVKKTSWT-EEEDRIIYQAHKRLGN 164
>Hs13641706_1 [K] KOG0048 Transcription factor Myb superfamily
Length = 394
Score = 50.1 bits (118), Expect = 1e-05
Identities = 36/113 (31%), Positives = 54/113 (46%), Gaps = 7/113 (6%)
Query: 302 ERRKDDFWTNICRVLPYRTRSSIYKHVRRKYHIFEQRGKWTPEEDAELARWCAEKEG--Q 359
E+ D W I LP RT ++ + +G WT EED + +K G +
Sbjct: 56 EQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQRVIE-LVQKYGPKR 114
Query: 360 WSNIGKVL-GRMPEDCRDRWRNYVKCGPNRAANKWSVEEEEKLKNVIHQMLDN 411
WS I K L GR+ + CR+RW N++ P W+ EEE+++ H+ L N
Sbjct: 115 WSVIAKHLKGRIGKQCRERWHNHL--NPEVKKTSWT-EEEDRIIYQAHKRLGN 164
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.312 0.130 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,367,497
Number of Sequences: 60738
Number of extensions: 1385724
Number of successful extensions: 4651
Number of sequences better than 1.0e-05: 14
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 4605
Number of HSP's gapped (non-prelim): 40
length of query: 595
length of database: 30,389,216
effective HSP length: 112
effective length of query: 483
effective length of database: 23,586,560
effective search space: 11392308480
effective search space used: 11392308480
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)