ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI1239 good J KOG3255 Translation, ribosomal structure and biogenesis 60S ribosomal protein L9
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI1239 435144 434572 -191
(191 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YNL067w [J] KOG3255 60S ribosomal protein L9 327 5e-90
YGL147c [J] KOG3255 60S ribosomal protein L9 325 2e-89
SPAC4G9.16c [J] KOG3255 60S ribosomal protein L9 212 2e-55
SPCC613.06 [J] KOG3255 60S ribosomal protein L9 209 1e-54
CE01380 [J] KOG3255 60S ribosomal protein L9 191 5e-49
At4g10450 [J] KOG3255 60S ribosomal protein L9 190 1e-48
At1g33140 [J] KOG3255 60S ribosomal protein L9 189 2e-48
At1g33120 [J] KOG3255 60S ribosomal protein L9 189 2e-48
Hs14720157 [J] KOG3255 60S ribosomal protein L9 185 4e-47
7297799 [J] KOG3255 60S ribosomal protein L9 171 4e-43
7297798 [J] KOG3255 60S ribosomal protein L9 131 5e-31
Hs20472513 [J] KOG3255 60S ribosomal protein L9 127 9e-30
ECU02g0800 [J] KOG3255 60S ribosomal protein L9 122 4e-28
Hs18564427 [J] KOG3255 60S ribosomal protein L9 121 5e-28
Hs17480497 [J] KOG3255 60S ribosomal protein L9 81 1e-15
Hs17437872 [J] KOG3255 60S ribosomal protein L9 69 5e-12
Hs17454459 [J] KOG3255 60S ribosomal protein L9 67 1e-11
Hs18587684_2 [J] KOG3255 60S ribosomal protein L9 58 9e-09
YHR147c [J] KOG3254 Mitochondrial/chloroplast ribosomal protein L6 51 8e-07
Hs17442502 [J] KOG3255 60S ribosomal protein L9 51 1e-06
>YNL067w [J] KOG3255 60S ribosomal protein L9
Length = 191
Score = 327 bits (839), Expect = 5e-90
Identities = 155/190 (81%), Positives = 178/190 (93%)
Query: 1 MKYIQTDQVLDVPEGVTVQIRSRIIKVTGPRGVLTKNLKHIDVTFTKVSNRQIKITVHNG 60
MKYIQT+Q +++PEGVTV I+SRI+KV GPRG LTKNLKHIDVTFTKV+N+ IK+ VHNG
Sbjct: 1 MKYIQTEQQIEIPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNG 60
Query: 61 DRKHVAALRTVKSLISNLITGVTKGYKYKLRYVYAHFPINVNVIEKDGAKFIEIRNFLGD 120
DRKHVAALRTVKSL+ N+ITGVTKGYKYK+RYVYAHFPINVN++EKDGAKFIE+RNFLGD
Sbjct: 61 DRKHVAALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGD 120
Query: 121 KKVREVPVREGVSVDFSTNQKDEIVLSGNSVENVSQNAADIQQICRVRNKDIRKFLDGIY 180
KK+R VPVR+GV+++FSTN KDEIVLSGNSVE+VSQNAAD+QQICRVRNKDIRKFLDGIY
Sbjct: 121 KKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKFLDGIY 180
Query: 181 VSEKGLIEEE 190
VS KG I E+
Sbjct: 181 VSHKGFIVED 190
>YGL147c [J] KOG3255 60S ribosomal protein L9
Length = 191
Score = 325 bits (834), Expect = 2e-89
Identities = 155/190 (81%), Positives = 177/190 (92%)
Query: 1 MKYIQTDQVLDVPEGVTVQIRSRIIKVTGPRGVLTKNLKHIDVTFTKVSNRQIKITVHNG 60
MKYIQT+Q ++VPEGVTV I+SRI+KV GPRG LTKNLKHIDVTFTKV+N+ IK+ VHNG
Sbjct: 1 MKYIQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNG 60
Query: 61 DRKHVAALRTVKSLISNLITGVTKGYKYKLRYVYAHFPINVNVIEKDGAKFIEIRNFLGD 120
RKHVAALRTVKSL+ N+ITGVTKGYKYK+RYVYAHFPINVN++EKDGAKFIE+RNFLGD
Sbjct: 61 GRKHVAALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGD 120
Query: 121 KKVREVPVREGVSVDFSTNQKDEIVLSGNSVENVSQNAADIQQICRVRNKDIRKFLDGIY 180
KK+R VPVR+GV+++FSTN KDEIVLSGNSVE+VSQNAAD+QQICRVRNKDIRKFLDGIY
Sbjct: 121 KKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKFLDGIY 180
Query: 181 VSEKGLIEEE 190
VS KG I E+
Sbjct: 181 VSHKGFITED 190
>SPAC4G9.16c [J] KOG3255 60S ribosomal protein L9
Length = 190
Score = 212 bits (540), Expect = 2e-55
Identities = 107/188 (56%), Positives = 141/188 (74%), Gaps = 3/188 (1%)
Query: 4 IQTDQVLDVPEGVTVQIRSRIIKVTGPRGVLTKNLKHIDVTFTKVSNRQIKITVHNGDRK 63
I D+ L +P+GVTV I++R + VTGPRG L +NL+H+D+ K N IK V +G RK
Sbjct: 5 IYKDETLTIPKGVTVDIKARNVTVTGPRGTLKQNLRHVDIEMKKQGNT-IKFIVWHGSRK 63
Query: 64 HVAALRTVKSLISNLITGVTKGYKYKLRYVYAHFPINVNVIEKDGAKFIEIRNFLGDKKV 123
H A +R+V S+I+N+I GVT+G++YK+R VYAHFPIN+N+ E +EIRNFLG++
Sbjct: 64 HNACIRSVYSIINNMIIGVTQGFRYKMRLVYAHFPININLTEN--GTVVEIRNFLGERIT 121
Query: 124 REVPVREGVSVDFSTNQKDEIVLSGNSVENVSQNAADIQQICRVRNKDIRKFLDGIYVSE 183
R + GV+V S+ KDEI+L GNS+ENVSQ+AA+I+QIC VRNKDIRKFLDGIYVSE
Sbjct: 122 RVIKCLPGVTVSISSAVKDEIILEGNSLENVSQSAANIKQICNVRNKDIRKFLDGIYVSE 181
Query: 184 KGLIEEEE 191
+G IEE E
Sbjct: 182 RGNIEELE 189
>SPCC613.06 [J] KOG3255 60S ribosomal protein L9
Length = 189
Score = 209 bits (533), Expect = 1e-54
Identities = 105/188 (55%), Positives = 140/188 (73%), Gaps = 3/188 (1%)
Query: 4 IQTDQVLDVPEGVTVQIRSRIIKVTGPRGVLTKNLKHIDVTFTKVSNRQIKITVHNGDRK 63
I D+ L +PEGV+V I++R++ V GPRGVL +NL+ +D+ K N IK V +G RK
Sbjct: 5 IYKDETLTIPEGVSVDIKARLVTVKGPRGVLKQNLRRVDIELKKQGNT-IKFIVWHGSRK 63
Query: 64 HVAALRTVKSLISNLITGVTKGYKYKLRYVYAHFPINVNVIEKDGAKFIEIRNFLGDKKV 123
H A +RT S+I+N+I GVT+G++YK+R VYAHFPIN+N+ E +EIRNFLG++
Sbjct: 64 HNACIRTAYSIINNMIIGVTQGFRYKMRLVYAHFPININLTEN--GTVVEIRNFLGERIT 121
Query: 124 REVPVREGVSVDFSTNQKDEIVLSGNSVENVSQNAADIQQICRVRNKDIRKFLDGIYVSE 183
R + GV+V S+ KDEI++ GNS+ENVSQ+AA+I+QIC VRNKDIRKFLDGIYVSE
Sbjct: 122 RVIKCLPGVTVSISSAVKDEIIIEGNSLENVSQSAANIKQICNVRNKDIRKFLDGIYVSE 181
Query: 184 KGLIEEEE 191
+G IEE E
Sbjct: 182 RGNIEELE 189
>CE01380 [J] KOG3255 60S ribosomal protein L9
Length = 189
Score = 191 bits (485), Expect = 5e-49
Identities = 99/187 (52%), Positives = 132/187 (69%), Gaps = 2/187 (1%)
Query: 1 MKYIQTDQVLDVPEGVTVQIRSRIIKVTGPRGVLTKNLKHIDVTFTKVSNRQIKITVHNG 60
MK I+++ + PEGVT +++RI+ VTGPRG + K+ +H+ + ++ +++ G
Sbjct: 1 MKLIESNDTVVFPEGVTFTVKNRIVHVTGPRGTIRKDFRHLHMEMERIGKSTLRVRKWFG 60
Query: 61 DRKHVAALRTVKSLISNLITGVTKGYKYKLRYVYAHFPINVNVIEKDGAKFIEIRNFLGD 120
RK +AA+RTV S I N+I GVT G++YK+R VYAHFPINV + +DG + +EIRNFLG+
Sbjct: 61 VRKELAAIRTVCSHIKNMIKGVTVGFRYKMRSVYAHFPINVTL--QDGNRTVEIRNFLGE 118
Query: 121 KKVREVPVREGVSVDFSTNQKDEIVLSGNSVENVSQNAADIQQICRVRNKDIRKFLDGIY 180
K VR VP+ EGV ST QKDEIV+ GN V+ VSQ AA IQQ V+ KDIRKFLDGIY
Sbjct: 119 KIVRRVPLPEGVIATISTAQKDEIVVEGNDVQFVSQAAARIQQSTAVKEKDIRKFLDGIY 178
Query: 181 VSEKGLI 187
VSEK I
Sbjct: 179 VSEKTTI 185
>At4g10450 [J] KOG3255 60S ribosomal protein L9
Length = 194
Score = 190 bits (482), Expect = 1e-48
Identities = 99/197 (50%), Positives = 139/197 (70%), Gaps = 9/197 (4%)
Query: 1 MKYIQTDQVLDVPEGVTVQIRSRIIKVTGPRGVLTKNLKHIDVTFTKVSN-----RQIKI 55
MK I + + +D+P+GV +++ +++I+V GPRG LT++ KH+++ F + + RQ+KI
Sbjct: 1 MKTILSSETMDIPDGVAIKVNAKVIEVEGPRGKLTRDFKHLNLDFQLIKDQVTGKRQLKI 60
Query: 56 TVHNGDRKHVAALRTVKSLISNLITGVTKGYKYKLRYVYAHFPINVNVIEKDGA-KFIEI 114
G RK A++RT S + NLI GVT+G+ Y++R+VYAHFPIN ++ DG K IEI
Sbjct: 61 DSWFGSRKTSASIRTALSHVDNLIAGVTQGFLYRMRFVYAHFPINASI---DGNNKSIEI 117
Query: 115 RNFLGDKKVREVPVREGVSVDFSTNQKDEIVLSGNSVENVSQNAADIQQICRVRNKDIRK 174
RNFLG+KKVR+V + +GV + S KDEI+L GN +E VS++ A I Q C V+ KDIRK
Sbjct: 118 RNFLGEKKVRKVEMLDGVKIVRSEKVKDEIILEGNDIELVSRSCALINQKCHVKKKDIRK 177
Query: 175 FLDGIYVSEKGLIEEEE 191
FLDGIYVSEKG I EE
Sbjct: 178 FLDGIYVSEKGKIAVEE 194
>At1g33140 [J] KOG3255 60S ribosomal protein L9
Length = 194
Score = 189 bits (480), Expect = 2e-48
Identities = 99/196 (50%), Positives = 141/196 (71%), Gaps = 7/196 (3%)
Query: 1 MKYIQTDQVLDVPEGVTVQIRSRIIKVTGPRGVLTKNLKHIDVTFTKVSN-----RQIKI 55
MK I + + +D+P+ VT+++ +++I+V GPRG L ++ KH+++ F + + +++KI
Sbjct: 1 MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKI 60
Query: 56 TVHNGDRKHVAALRTVKSLISNLITGVTKGYKYKLRYVYAHFPINVNVIEKDGAKFIEIR 115
G RK A++RT S + NLI+GVT+G++YK+R+VYAHFPIN + I DG K IEIR
Sbjct: 61 DSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINAS-IGGDG-KSIEIR 118
Query: 116 NFLGDKKVREVPVREGVSVDFSTNQKDEIVLSGNSVENVSQNAADIQQICRVRNKDIRKF 175
NFLG+KKVR+V + +GV++ S KDEIVL GN +E VS++ A I Q C V+ KDIRKF
Sbjct: 119 NFLGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKF 178
Query: 176 LDGIYVSEKGLIEEEE 191
LDGIYVSEK I EEE
Sbjct: 179 LDGIYVSEKSKIVEEE 194
>At1g33120 [J] KOG3255 60S ribosomal protein L9
Length = 194
Score = 189 bits (480), Expect = 2e-48
Identities = 99/196 (50%), Positives = 141/196 (71%), Gaps = 7/196 (3%)
Query: 1 MKYIQTDQVLDVPEGVTVQIRSRIIKVTGPRGVLTKNLKHIDVTFTKVSN-----RQIKI 55
MK I + + +D+P+ VT+++ +++I+V GPRG L ++ KH+++ F + + +++KI
Sbjct: 1 MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKI 60
Query: 56 TVHNGDRKHVAALRTVKSLISNLITGVTKGYKYKLRYVYAHFPINVNVIEKDGAKFIEIR 115
G RK A++RT S + NLI+GVT+G++YK+R+VYAHFPIN + I DG K IEIR
Sbjct: 61 DSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINAS-IGGDG-KSIEIR 118
Query: 116 NFLGDKKVREVPVREGVSVDFSTNQKDEIVLSGNSVENVSQNAADIQQICRVRNKDIRKF 175
NFLG+KKVR+V + +GV++ S KDEIVL GN +E VS++ A I Q C V+ KDIRKF
Sbjct: 119 NFLGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKF 178
Query: 176 LDGIYVSEKGLIEEEE 191
LDGIYVSEK I EEE
Sbjct: 179 LDGIYVSEKSKIVEEE 194
>Hs14720157 [J] KOG3255 60S ribosomal protein L9
Length = 192
Score = 185 bits (469), Expect = 4e-47
Identities = 94/193 (48%), Positives = 138/193 (70%), Gaps = 4/193 (2%)
Query: 1 MKYIQTDQVLDVPEGVTVQIRSRIIKVTGPRGVLTKNLKHIDVTFTKVSNRQIKITVHN- 59
MK I ++Q +D+PE V + ++ R + V GPRG L ++ HI+V + + ++ ++ V
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKW 60
Query: 60 -GDRKHVAALRTVKSLISNLITGVTKGYKYKLRYVYAHFPINVNVIEKDGAKFIEIRNFL 118
G+RK +A +RT+ S + N+I GVT G++YK+R VYAHFPINV VI+++G+ +EIRNFL
Sbjct: 61 WGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINV-VIQENGS-LVEIRNFL 118
Query: 119 GDKKVREVPVREGVSVDFSTNQKDEIVLSGNSVENVSQNAADIQQICRVRNKDIRKFLDG 178
G+K +R V +R GV+ S QKDE++L GN +E VS +AA IQQ V+NKDIRKFLDG
Sbjct: 119 GEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDG 178
Query: 179 IYVSEKGLIEEEE 191
IYVSEKG +++ +
Sbjct: 179 IYVSEKGTVQQAD 191
>7297799 [J] KOG3255 60S ribosomal protein L9
Length = 190
Score = 171 bits (434), Expect = 4e-43
Identities = 87/191 (45%), Positives = 129/191 (66%), Gaps = 2/191 (1%)
Query: 1 MKYIQTDQVLDVPEGVTVQIRSRIIKVTGPRGVLTKNLKHIDVTFTKVSNRQIKITVHNG 60
M+ I ++Q + +P+ + +++R++ +TG RG L ++ KH+ + R +K+ G
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFG 60
Query: 61 DRKHVAALRTVKSLISNLITGVTKGYKYKLRYVYAHFPINVNVIEKDGAKFIEIRNFLGD 120
+K +AA+RTV S I N+I GVT G++YK+R VYAHFPIN + + IEIRNFLG+
Sbjct: 61 TKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINC--VTSENNTVIEIRNFLGE 118
Query: 121 KKVREVPVREGVSVDFSTNQKDEIVLSGNSVENVSQNAADIQQICRVRNKDIRKFLDGIY 180
K +R V + GV+V ST QKDE+++ GN +E+VS +AA IQQ V+NKDIRKFLDG+Y
Sbjct: 119 KYIRRVEMAPGVTVVNSTAQKDELIVEGNDIESVSGSAALIQQSTTVKNKDIRKFLDGLY 178
Query: 181 VSEKGLIEEEE 191
VSEK + + E
Sbjct: 179 VSEKTTVVKLE 189
>7297798 [J] KOG3255 60S ribosomal protein L9
Length = 208
Score = 131 bits (330), Expect = 5e-31
Identities = 64/154 (41%), Positives = 101/154 (65%), Gaps = 2/154 (1%)
Query: 1 MKYIQTDQVLDVPEGVTVQIRSRIIKVTGPRGVLTKNLKHIDVTFTKVSNRQIKITVHNG 60
M+ I ++Q + +P+ + +++R++ +TG RG L ++ KH+ + R +K+ G
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFG 60
Query: 61 DRKHVAALRTVKSLISNLITGVTKGYKYKLRYVYAHFPINVNVIEKDGAKFIEIRNFLGD 120
+K +AA+RTV S I N+I GVT G++YK+R VYAHFPI N + + IEIRNFLG+
Sbjct: 61 TKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPI--NCVTSENNTVIEIRNFLGE 118
Query: 121 KKVREVPVREGVSVDFSTNQKDEIVLSGNSVENV 154
K +R V + GV+V ST QKDE+++ GN +E+V
Sbjct: 119 KYIRRVEMAPGVTVVNSTAQKDELIVEGNDIESV 152
>Hs20472513 [J] KOG3255 60S ribosomal protein L9
Length = 125
Score = 127 bits (319), Expect = 9e-30
Identities = 63/117 (53%), Positives = 84/117 (70%), Gaps = 2/117 (1%)
Query: 68 LRTVKSLISNLITGVTKGYKYKLRYVYAHFPINVNVIEKDGAKFIEIRNFLGDKKVREVP 127
++T+ S + N+I GVT G+ YK+R VYAHFPIN+ + ++ F+EIRNFLG+K +R V
Sbjct: 2 VQTICSHVQNMIKGVTLGFHYKMRSVYAHFPINI--VTRENGSFVEIRNFLGEKYIRRVR 59
Query: 128 VREGVSVDFSTNQKDEIVLSGNSVENVSQNAADIQQICRVRNKDIRKFLDGIYVSEK 184
+R GV+ QK E++L GN +E VS +AA IQQ V+NK IRKFLDGIYVSEK
Sbjct: 60 MRPGVACSVCQTQKHELILEGNDIELVSNSAALIQQATTVKNKHIRKFLDGIYVSEK 116
>ECU02g0800 [J] KOG3255 60S ribosomal protein L9
Length = 204
Score = 122 bits (305), Expect = 4e-28
Identities = 67/184 (36%), Positives = 107/184 (57%), Gaps = 4/184 (2%)
Query: 4 IQTDQVLDVPEGVTVQIRSRIIKVTGPRGVLTKNLKHIDVTFTKVSNRQIKITVHNGDRK 63
I +++ VPE T +I GP+G + ++ +TF + I+I + NG RK
Sbjct: 24 ILVTRIVKVPEDCTATQEGKIFTFQGPKGSIVEDCTRHPLTFD-IHEGNIRIRLWNGKRK 82
Query: 64 HVAALRTVKSLISNLITGVTKGYKYKLRYVYAHFPINVNVIEKDGAKFIEIRNFLGDKKV 123
+A TV+SL+ N I VT G+ Y ++ VY HF IN+ + K+ K + ++NFLG+K V
Sbjct: 83 AMALAITVESLLRNAIKAVTVGFAYTMKAVYNHFSINMEI--KEDGKILLVKNFLGEKNV 140
Query: 124 REVPVREGVSVDFSTNQKDEIVLSGNSVENVSQNAADIQQICRVRNKDIRKFLDGIYVSE 183
+ +R V +KD IV+ G S+ +VSQ+A I C+ +N+D R FLDGI+V+E
Sbjct: 141 KRFRMRGAARVRLD-ERKDTIVIEGPSLSDVSQSAGTITNECKAKNRDSRVFLDGIFVTE 199
Query: 184 KGLI 187
+G++
Sbjct: 200 RGIM 203
>Hs18564427 [J] KOG3255 60S ribosomal protein L9
Length = 113
Score = 121 bits (304), Expect = 5e-28
Identities = 65/108 (60%), Positives = 81/108 (74%), Gaps = 2/108 (1%)
Query: 78 LITGVTKGYKYKLRYVYAHFPINVNVIEKDGAKFIEIRNFLGDKKVREVPVREGVSVDFS 137
+I GVT G+ YK+R VYAHFPINV VI+++G+ +EIRNFLG K +R V +R GV S
Sbjct: 1 MIKGVTLGFHYKMRSVYAHFPINV-VIQENGS-LVEIRNFLGKKYIRRVWMRAGVVCSVS 58
Query: 138 TNQKDEIVLSGNSVENVSQNAADIQQICRVRNKDIRKFLDGIYVSEKG 185
QKDE++L GN +E VS +AA IQQ V+ KDIR+FLDGIYVSEKG
Sbjct: 59 QAQKDELILEGNDIELVSNSAALIQQATTVKKKDIREFLDGIYVSEKG 106
>Hs17480497 [J] KOG3255 60S ribosomal protein L9
Length = 105
Score = 80.9 bits (198), Expect = 1e-15
Identities = 38/102 (37%), Positives = 64/102 (62%), Gaps = 2/102 (1%)
Query: 1 MKYIQTDQVLDVPEGVTVQIRSRIIKVTGPRGVLTKNLKHIDVTFTKVSNRQIKITVHN- 59
MK I ++Q +D+PE V + ++ + V GPRG L ++ HI + + + ++ ++ V
Sbjct: 1 MKTILSNQTVDIPENVDITLKGCTVIVKGPRGTLWRDFSHIHIELSLLGKKKQRLQVDKR 60
Query: 60 -GDRKHVAALRTVKSLISNLITGVTKGYKYKLRYVYAHFPIN 100
G+R+ +AA++ + S + N I GVT G YK+R VYAHFP+N
Sbjct: 61 WGNREELAAVQNICSHVQNTIKGVTLGLSYKMRSVYAHFPVN 102
>Hs17437872 [J] KOG3255 60S ribosomal protein L9
Length = 129
Score = 68.6 bits (166), Expect = 5e-12
Identities = 31/52 (59%), Positives = 41/52 (78%)
Query: 140 QKDEIVLSGNSVENVSQNAADIQQICRVRNKDIRKFLDGIYVSEKGLIEEEE 191
QKDE++L GN+++ VS +AA IQQ V+NKDIRK LDG YVSEKG +++ E
Sbjct: 56 QKDELILEGNNIQLVSNSAASIQQATTVKNKDIRKILDGTYVSEKGTVQQAE 107
>Hs17454459 [J] KOG3255 60S ribosomal protein L9
Length = 112
Score = 67.0 bits (162), Expect = 1e-11
Identities = 34/62 (54%), Positives = 42/62 (66%)
Query: 127 PVREGVSVDFSTNQKDEIVLSGNSVENVSQNAADIQQICRVRNKDIRKFLDGIYVSEKGL 186
P +E S QKDE++L GN +E VS + A IQQ V+ KDIRKFLDGIYVSEKG
Sbjct: 47 PWKEKEEAPVSQAQKDELILEGNDIELVSNSVALIQQATTVKIKDIRKFLDGIYVSEKGT 106
Query: 187 IE 188
++
Sbjct: 107 VQ 108
>Hs18587684_2 [J] KOG3255 60S ribosomal protein L9
Length = 87
Score = 57.8 bits (138), Expect = 9e-09
Identities = 41/126 (32%), Positives = 60/126 (47%), Gaps = 39/126 (30%)
Query: 62 RKHVAALRTVKSLISNLITGVTKGYKYKLRYVYAHFPINVNVIEKDGAKFIEIRNFLGDK 121
RK VA T+ + + N+I GVT G+ YK+R V+ FPIN+ VI++ G+ +I+NFLG+K
Sbjct: 1 RKEVATACTICNHVQNIIKGVTLGFHYKMRSVHTPFPINL-VIQEHGS-LDKIQNFLGEK 58
Query: 122 KVREVPVREGVSVDFSTNQKDEIVLSGNSVENVSQNAADIQQICRVRNKDIRKFLDGIYV 181
+ Q V+NKD RK D +YV
Sbjct: 59 YI-------------------------------------WMQSTTVKNKDNRKLSDDLYV 81
Query: 182 SEKGLI 187
+EKG +
Sbjct: 82 TEKGTV 87
>YHR147c [J] KOG3254 Mitochondrial/chloroplast ribosomal protein L6
Length = 214
Score = 51.2 bits (121), Expect = 8e-07
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 9/153 (5%)
Query: 12 VPEGVTVQIRSRIIKVTGPRGVLTKNLKHIDVTFTKVSNRQIKITVHNGDRKHVAAL-RT 70
+ +G T S+ I V GP+G L+ + + +I +TV N + KH ++ T
Sbjct: 43 IRKGRTSMNISQNITVKGPKGELSVEVPDFLHLDKDEKHGKINVTVQNSEDKHQRSMWGT 102
Query: 71 VKSLISNLITGVTKGYKYKLRYVYAHFPINVNVIEKDGAKFIEIRNFLGDKKVREVPVRE 130
V+SLI+N I GVT+G+ LR+V + +E DG KF+ ++ K+ +VP E
Sbjct: 103 VRSLINNHIIGVTEGHLAVLRFVGTGYRAQ---LENDG-KFVNVKVGASIKQGLDVP--E 156
Query: 131 GVSVDFSTNQKDEIVLSGNSVENVSQNAADIQQ 163
G+ V T +++ G + + V AA +++
Sbjct: 157 GIVV--KTPAPTSLIIEGCNKQQVLLFAAKLRK 187
>Hs17442502 [J] KOG3255 60S ribosomal protein L9
Length = 130
Score = 50.8 bits (120), Expect = 1e-06
Identities = 26/66 (39%), Positives = 39/66 (58%)
Query: 126 VPVREGVSVDFSTNQKDEIVLSGNSVENVSQNAADIQQICRVRNKDIRKFLDGIYVSEKG 185
V +R GV+ S ++DE++L N VE VS +A IQQ+ V+ RKF IYVS G
Sbjct: 48 VQMRPGVACSVSQAKRDELILEENDVELVSSSAGLIQQVATVKTSKNRKFWGAIYVSVTG 107
Query: 186 LIEEEE 191
+++ +
Sbjct: 108 TVQQAD 113
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.318 0.137 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,358,127
Number of Sequences: 60738
Number of extensions: 394490
Number of successful extensions: 1125
Number of sequences better than 1.0e-05: 20
Number of HSP's better than 0.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1082
Number of HSP's gapped (non-prelim): 23
length of query: 191
length of database: 30,389,216
effective HSP length: 100
effective length of query: 91
effective length of database: 24,315,416
effective search space: 2212702856
effective search space used: 2212702856
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)