ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI1249 check: MH BK KOG0386 Chromatin structure and dynamics Chromatin remodeling complex SWI/SNF, component SWI2 and related ATPases (DNA/RNA helicase superfamily)
r_klactVI1249 check: MH BK KOG0386 Transcription Chromatin remodeling complex SWI/SNF, component SWI2 and related ATPases (DNA/RNA helicase superfamily)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI1249 439683 435652 -1344
(1344 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YIL126w [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 1495 0.0
YOR290c [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 939 0.0
SPAC1250.01 [BK] KOG0386 Chromatin remodeling complex SWI/SNF co... 902 0.0
Hs21071056 [BK] KOG0386 Chromatin remodeling complex SWI/SNF com... 698 0.0
7294205 [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 682 0.0
CE27114 [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 672 0.0
Hs21071050 [BK] KOG0386 Chromatin remodeling complex SWI/SNF com... 669 0.0
Hs21071048 [BK] KOG0386 Chromatin remodeling complex SWI/SNF com... 669 0.0
CE05553 [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 644 0.0
At3g06010 [BK] KOG0386 Chromatin remodeling complex SWI/SNF comp... 615 e-175
At5g19310 [BK] KOG0386 Chromatin remodeling complex SWI/SNF comp... 595 e-169
At2g28290 [BK] KOG0386 Chromatin remodeling complex SWI/SNF comp... 555 e-157
7303422 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 480 e-135
At3g06400 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 475 e-133
At5g18620 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 464 e-130
Hs21071058 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 461 e-129
Hs21071044 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 455 e-127
YOR304w [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 454 e-127
CE00789 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 451 e-126
At2g46020 [BK] KOG0386 Chromatin remodeling complex SWI/SNF comp... 433 e-121
YBR245c [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 433 e-120
At2g13370 [K] KOG0384 Chromodomain-helicase DNA-binding protein 425 e-118
Hs21071046 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 419 e-116
Hs4557449 [K] KOG0384 Chromodomain-helicase DNA-binding protein 416 e-115
YER164w [K] KOG0384 Chromodomain-helicase DNA-binding protein 410 e-114
Hs4557447 [K] KOG0384 Chromodomain-helicase DNA-binding protein 407 e-113
7295870 [K] KOG0384 Chromodomain-helicase DNA-binding protein 404 e-112
SPAC3G6.01 [K] KOG0384 Chromodomain-helicase DNA-binding protein 402 e-111
SPAC1783.05 [K] KOG0384 Chromodomain-helicase DNA-binding protein 399 e-110
ECU10g1320 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 395 e-109
CE11572 [K] KOG0384 Chromodomain-helicase DNA-binding protein 393 e-109
Hs4557453 [R] KOG0383 Predicted helicase 389 e-107
At5g66750 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 389 e-107
Hs4557451 [R] KOG0383 Predicted helicase 378 e-104
Hs20533808 [R] KOG0383 Predicted helicase 376 e-103
At2g25170 [R] KOG0383 Predicted helicase 371 e-102
CE03657 [R] KOG0383 Predicted helicase 369 e-101
CE17716 [R] KOG0383 Predicted helicase 366 e-100
YFR038w [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 365 e-100
Hs21362042 [K] KOG0384 Chromodomain-helicase DNA-binding protein 364 e-100
Hs22047300 [K] KOG0384 Chromodomain-helicase DNA-binding protein 363 1e-99
CE18196 [K] KOG0384 Chromodomain-helicase DNA-binding protein 362 2e-99
7293795 [R] KOG0383 Predicted helicase 361 4e-99
Hs22047966 [K] KOG0384 Chromodomain-helicase DNA-binding protein 360 6e-99
Hs21914927 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 352 2e-96
Hs20536191 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 349 1e-95
SPBP35G2.10 [R] KOG0383 Predicted helicase 342 2e-93
At5g44800 [R] KOG0383 Predicted helicase 340 1e-92
ECU01g0350 [K] KOG0384 Chromodomain-helicase DNA-binding protein 339 2e-92
At2g44980 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 318 5e-86
7297570 [B] KOG0389 SNF2 family DNA-dependent ATPase 307 6e-83
Hs14149730 [B] KOG0389 SNF2 family DNA-dependent ATPase 306 1e-82
CE16277 [B] KOG0389 SNF2 family DNA-dependent ATPase 305 4e-82
YPL082c [K] KOG0392 SNF2 family DNA-dependent ATPase domain-cont... 301 4e-81
YAL019w [B] KOG0389 SNF2 family DNA-dependent ATPase 284 8e-76
SPCC1235.05c [B] KOG0389 SNF2 family DNA-dependent ATPase 283 2e-75
YJR035w [KL] KOG0387 Transcription-coupled repair protein CSB/RA... 279 2e-74
SPAC20G8.08c [B] KOG0389 SNF2 family DNA-dependent ATPase 276 1e-73
SPBC1826.01c [K] KOG0392 SNF2 family DNA-dependent ATPase domain... 275 4e-73
At2g02090 [B] KOG0389 SNF2 family DNA-dependent ATPase 274 8e-73
Hs4557565 [KL] KOG0387 Transcription-coupled repair protein CSB/... 272 2e-72
SPCP25A2.02c [KL] KOG0387 Transcription-coupled repair protein C... 269 3e-71
At2g18760 [KL] KOG0387 Transcription-coupled repair protein CSB/... 267 1e-70
7300091 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-cont... 259 2e-68
ECU09g1890 [L] KOG0388 SNF2 family DNA-dependent ATPase 258 6e-68
At3g54280 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-co... 255 3e-67
CE25717 [R] KOG0391 SNF2 family DNA-dependent ATPase 254 5e-67
ECU09g0410 [KL] KOG0387 Transcription-coupled repair protein CSB... 254 6e-67
YDR334w [R] KOG0391 SNF2 family DNA-dependent ATPase 254 8e-67
At3g12810 [R] KOG0391 SNF2 family DNA-dependent ATPase 253 1e-66
YGL150c [L] KOG0388 SNF2 family DNA-dependent ATPase 253 2e-66
SPCC1620.14c [BK] KOG0386 Chromatin remodeling complex SWI/SNF c... 251 7e-66
SPAC25A8.01c [B] KOG0389 SNF2 family DNA-dependent ATPase 251 7e-66
Hs5730067 [R] KOG0391 SNF2 family DNA-dependent ATPase 249 2e-65
Hs17454125 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-c... 249 2e-65
CE11028 [KL] KOG0387 Transcription-coupled repair protein CSB/RA... 245 4e-64
At3g57300 [L] KOG0388 SNF2 family DNA-dependent ATPase 243 2e-63
At1g03750 [KL] KOG0387 Transcription-coupled repair protein CSB/... 241 6e-63
7295868 [L] KOG0390 DNA repair protein SNF2 family 240 1e-62
ECU03g1530 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-c... 231 4e-60
CE15856 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-cont... 231 4e-60
Hs6912622_2 [L] KOG0390 DNA repair protein SNF2 family 226 1e-58
CE25143 [L] KOG0390 DNA repair protein SNF2 family 223 2e-57
Hs4506397 [L] KOG0390 DNA repair protein SNF2 family 218 7e-56
SPAC15A10.03c [L] KOG0390 DNA repair protein SNF2 family 217 9e-56
YGL163c [L] KOG0390 DNA repair protein SNF2 family 214 6e-55
At3g19210 [L] KOG0390 DNA repair protein SNF2 family 210 1e-53
7300511 [L] KOG0388 SNF2 family DNA-dependent ATPase 206 2e-52
Hs13376715 [K] KOG0384 Chromodomain-helicase DNA-binding protein 206 2e-52
YBR073w [L] KOG0390 DNA repair protein SNF2 family 206 3e-52
At4g31900 [R] KOG0383 Predicted helicase 194 6e-49
SPAC22F3.03c [L] KOG0390 DNA repair protein SNF2 family 184 6e-46
At5g63950 [KL] KOG0387 Transcription-coupled repair protein CSB/... 184 6e-46
SPAC3G6.12 [L] KOG0388 SNF2 family DNA-dependent ATPase 183 1e-45
Hs14767157 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 183 2e-45
Hs15805014 [R] KOG0391 SNF2 family DNA-dependent ATPase 180 2e-44
HsM8922362 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 179 3e-44
CE23323 [L] KOG0390 DNA repair protein SNF2 family 171 9e-42
At1g08600 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box ... 169 2e-41
HsM14149926 [K] KOG0384 Chromodomain-helicase DNA-binding protein 162 3e-39
7296236 [K] KOG0384 Chromodomain-helicase DNA-binding protein 154 9e-37
Hs20538502 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily 137 2e-31
At1g02670 [L] KOG1002 Nucleotide excision repair protein RAD16 137 2e-31
7293730 [R] KOG0383 Predicted helicase 126 3e-28
CE27689 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 D... 122 4e-27
CE27688 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 D... 122 4e-27
ECU06g0820 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL... 117 1e-25
SPBC582.10c [KL] KOG1001 Helicase-like transcription factor HLTF... 116 3e-25
At1g48310 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1... 116 3e-25
Hs21071060 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL... 115 4e-25
Hs4757978 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 111 7e-24
Hs20336209 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box... 105 4e-22
Hs20336207 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box... 105 4e-22
Hs20336205 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box... 105 4e-22
7296909 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 D... 105 5e-22
Hs17437081 [B] KOG0389 SNF2 family DNA-dependent ATPase 102 4e-21
7301343 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box su... 102 5e-21
SPBC23E6.02 [KL] KOG1001 Helicase-like transcription factor HLTF... 101 7e-21
CE17477 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily 100 2e-20
At5g07810 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1... 99 6e-20
SPCC330.01c [L] KOG1002 Nucleotide excision repair protein RAD16 97 1e-19
7298963 [KL] KOG4439 RNA polymerase II transcription termination... 97 1e-19
At2g21450 [L] KOG0390 DNA repair protein SNF2 family 97 2e-19
YBR114w [L] KOG1002 Nucleotide excision repair protein RAD16 96 4e-19
At5g22750 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 93 2e-18
At5g43530 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 92 4e-18
SPAC17A2.12 [KL] KOG1001 Helicase-like transcription factor HLTF... 91 9e-18
YLR032w [KL] KOG1001 Helicase-like transcription factor HLTF/DNA... 91 1e-17
Hs21071052 [KL] KOG1001 Helicase-like transcription factor HLTF/... 88 8e-17
CE17314 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box su... 87 1e-16
At5g05130 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 86 3e-16
YOR191w [KL] KOG1001 Helicase-like transcription factor HLTF/DNA... 86 4e-16
7291744 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily 86 4e-16
At1g11100 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 85 9e-16
Hs19923174 [KL] KOG4439 RNA polymerase II transcription terminat... 84 2e-15
At1g05480 [L] KOG0390 DNA repair protein SNF2 family 82 4e-15
Hs22048060 [K] KOG0384 Chromodomain-helicase DNA-binding protein 82 6e-15
At3g20010 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 81 1e-14
At1g61140 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 81 1e-14
CE11083 [KL] KOG4439 RNA polymerase II transcription termination... 81 1e-14
SPBC4B4.03 [BK] KOG1827 Chromatin remodeling complex RSC subunit... 80 3e-14
At2g16390 [L] KOG0390 DNA repair protein SNF2 family 79 5e-14
7301208 [BK] KOG1827 Chromatin remodeling complex RSC subunit RS... 78 8e-14
CE14110 [KL] KOG4439 RNA polymerase II transcription termination... 77 2e-13
At1g05120 [L] KOG1002 Nucleotide excision repair protein RAD16 77 2e-13
At3g16600 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 76 3e-13
At1g50410 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 76 4e-13
7298962 [KL] KOG4439 RNA polymerase II transcription termination... 75 7e-13
SPBC1734.15 [BK] KOG1827 Chromatin remodeling complex RSC subuni... 74 1e-12
CE11450 [KL] KOG4439 RNA polymerase II transcription termination... 70 2e-11
Hs20532976 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL... 69 4e-11
SPAC1952.05 [BK] KOG1472 Histone acetyltransferase SAGA/ADA cata... 69 7e-11
CE24921 [R] KOG1632 Uncharacterized PHD Zn-finger protein 68 9e-11
CE15910 [R] KOG1632 Uncharacterized PHD Zn-finger protein 68 9e-11
CE15909 [R] KOG1632 Uncharacterized PHD Zn-finger protein 68 9e-11
CE05310 [BK] KOG1827 Chromatin remodeling complex RSC subunit RS... 65 6e-10
At3g24340 [L] KOG0390 DNA repair protein SNF2 family 64 2e-09
7302099 [B] KOG1245 Chromatin remodeling complex WSTF-ISWI large... 64 2e-09
Hs17441908 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL... 63 4e-09
YGR056w [BK] KOG1827 Chromatin remodeling complex RSC subunit RS... 62 5e-09
At2g34900 [K] KOG1474 Transcription initiation factor TFIID subu... 62 6e-09
SPAC13G6.01c [KL] KOG1001 Helicase-like transcription factor HLT... 60 3e-08
At2g40770 [L] KOG0298 DEAD box-containing helicase-like transcri... 60 3e-08
Hs4502453 [K] KOG1474 Transcription initiation factor TFIID subu... 59 5e-08
YGR252w [BK] KOG1472 Histone acetyltransferase SAGA/ADA catalyti... 58 1e-07
Hs7304919 [B] KOG1245 Chromatin remodeling complex WSTF-ISWI lar... 58 1e-07
CE23294 [KL] KOG4439 RNA polymerase II transcription termination... 58 1e-07
CE27187 [B] KOG1245 Chromatin remodeling complex WSTF-ISWI large... 57 2e-07
SPAC11E3.01c [R] KOG0391 SNF2 family DNA-dependent ATPase 56 3e-07
CE19384 [K] KOG1474 Transcription initiation factor TFIID subuni... 56 3e-07
Hs7657218 [K] KOG1474 Transcription initiation factor TFIID subu... 55 6e-07
Hs19718731 [K] KOG1474 Transcription initiation factor TFIID sub... 55 6e-07
YLR357w [BK] KOG1827 Chromatin remodeling complex RSC subunit RS... 55 8e-07
Hs6382076 [BK] KOG1472 Histone acetyltransferase SAGA/ADA cataly... 55 8e-07
At5g46550 [K] KOG1474 Transcription initiation factor TFIID subu... 55 8e-07
At3g42670 [L] KOG0390 DNA repair protein SNF2 family 55 8e-07
7290870 [K] KOG1474 Transcription initiation factor TFIID subuni... 55 8e-07
At5g20420 [L] KOG0390 DNA repair protein SNF2 family 55 1e-06
Hs11426183 [BK] KOG1472 Histone acetyltransferase SAGA/ADA catal... 54 2e-06
Hs10835101 [BK] KOG1472 Histone acetyltransferase SAGA/ADA catal... 54 2e-06
CE28069 [K] KOG1778 CREB binding protein/P300 and related TAZ Zn... 54 2e-06
CE21117 [K] KOG1778 CREB binding protein/P300 and related TAZ Zn... 54 2e-06
7302505 [K] KOG1474 Transcription initiation factor TFIID subuni... 53 4e-06
7301065 [K] KOG1474 Transcription initiation factor TFIID subuni... 53 4e-06
7298896 [K] KOG0008 Transcription initiation factor TFIID subuni... 53 4e-06
Hs4557557 [K] KOG1778 CREB binding protein/P300 and related TAZ ... 52 6e-06
Hs11067749 [K] KOG1474 Transcription initiation factor TFIID sub... 52 8e-06
ECU08g1640 [K] KOG1474 Transcription initiation factor TFIID sub... 52 8e-06
7295362 [L] KOG0298 DEAD box-containing helicase-like transcript... 52 8e-06
>YIL126w [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1359
Score = 1495 bits (3871), Expect = 0.0
Identities = 781/1319 (59%), Positives = 937/1319 (70%), Gaps = 63/1319 (4%)
Query: 83 VILPLPETKEQLENLIYRYRYISQYRDHNKLEVEAIEQIFTQISDKQEEYKEXXXXXXEN 142
+ +P P + QLE L+YRYR I + NKLE++AIE F IS Q+ Y+ ++
Sbjct: 44 ITIPKPRSSAQLEQLLYRYRAIQNHPKENKLEIKAIEDTFRNISRDQDIYETKLDTLRKS 103
Query: 143 AAKDIQWDEKLLKEQMVSLQLLSKDINIPDGLLXXXXXXXXXXXXXXXXXQLEK-VKLSV 201
K Q+DE LL + +V+LQLL KD ++PD L +K +K+S
Sbjct: 104 IDKGFQYDEDLLNKHLVALQLLEKDTDVPDYFLDLPDTKNDNTTAIEVDYSEKKPIKISA 163
Query: 202 DFDETSVRLGLPEALSNFRLKSGNEASLGDWEVEKIISTLIAKRIKQLENLPSNLGTYSL 261
DF+ + LGL SN + +LGD + E IS I+ RI +LE LP+NLGTYSL
Sbjct: 164 DFNAKAKSLGLESKFSN-----ATKTALGDPDTEIRISARISNRINELERLPANLGTYSL 218
Query: 262 NDALDFVTKDDIPTGADDFKLRALVELKSLKMLTKQKSLRKRLIESVAAKSHNIIPSLRD 321
+D L+F+TKDD+ + D FK++ALVELKSLK+LTKQKS+R++LI +VA+++H+ IP LRD
Sbjct: 219 DDCLEFITKDDLSSRMDTFKIKALVELKSLKLLTKQKSIRQKLINNVASQAHHNIPYLRD 278
Query: 322 SPYTLAAQRSIHVRPKTIVPQTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVSSINERL 381
SP+T AAQRS+ +R K IVPQT I+ I ER
Sbjct: 279 SPFTAAAQRSVQIRSKVIVPQTVRLAEELERQQLLEKRKKERNLHLQKINSIIDFIKERQ 338
Query: 382 ENDTTQRDRCYQMGRSIGNLHGHLEKDEQRRMERTAKQRLAALKSNDEEAYLKLLDQTKD 441
++++RC+Q GR +LH +EKDEQ+R+ERTAKQRLAALKSNDEEAYLKLLDQTKD
Sbjct: 339 SEQWSRQERCFQFGRLGASLHNQMEKDEQKRIERTAKQRLAALKSNDEEAYLKLLDQTKD 398
Query: 442 TRITHLLKQTNSFLDSLAQAVRVQQNEVRIKRGEEIPPITDEEREKIDYYEVSHRIKETV 501
TRIT LL+QTNSFLDSL++AVR QQNE +I GEE+ PITDEEREK DYYEV+HRIKE +
Sbjct: 399 TRITQLLRQTNSFLDSLSEAVRAQQNEAKILHGEEVQPITDEEREKTDYYEVAHRIKEKI 458
Query: 502 DKQPSILVGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNE 561
DKQPSILVGGTLKEYQL+GLEWMVSLYNNHLNGILADEMGLGKTIQSISLI+YLYE+K +
Sbjct: 459 DKQPSILVGGTLKEYQLRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITYLYEVKKD 518
Query: 562 RQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKALQHTIKMGNFDVVLTTYEY 621
PFLVIVPLSTITNWT+EFEKWAPSL TI+YKG PNQR +LQH I++GNFDV+LTTYEY
Sbjct: 519 IGPFLVIVPLSTITNWTLEFEKWAPSLNTIIYKGTPNQRHSLQHQIRVGNFDVLLTTYEY 578
Query: 622 IIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELW 681
IIKD+ LL+KHDWAHMIIDEGHRMKNAQSKLS+T++HYY+T+NRLILTGTPLQNNLPELW
Sbjct: 579 IIKDKSLLSKHDWAHMIIDEGHRMKNAQSKLSFTISHYYRTRNRLILTGTPLQNNLPELW 638
Query: 682 ALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRL 741
ALLNFVLPKIFNS+KTF++WFNTPFANTG +IRRLHKVLRPFLLRRL
Sbjct: 639 ALLNFVLPKIFNSAKTFEDWFNTPFANTGTQEKLELTEEETLLIIRRLHKVLRPFLLRRL 698
Query: 742 KKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKVMQ 801
KKEVEKDLPDKVEKV+KCKLS LQQQLY+QMLKHNA F+GAGTEGATK GIKGLNNK+MQ
Sbjct: 699 KKEVEKDLPDKVEKVIKCKLSGLQQQLYQQMLKHNALFVGAGTEGATKGGIKGLNNKIMQ 758
Query: 802 LRKICNHPFVFDEVENVINPTRENSSILYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQ 861
LRKICNHPFVFDEVE V+NP+R NS +L+RV+GKFELLDRVLPKFKASGHRVLMFFQMTQ
Sbjct: 759 LRKICNHPFVFDEVEGVVNPSRGNSDLLFRVAGKFELLDRVLPKFKASGHRVLMFFQMTQ 818
Query: 862 VMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQT 921
VMDIMEDFLRM+DLKYMRLDG TK E+RT ML FNAPDS+YFCFLLSTRAGGLGLNLQT
Sbjct: 819 VMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCFLLSTRAGGLGLNLQT 878
Query: 922 ADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGK 981
ADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGK
Sbjct: 879 ADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGK 938
Query: 982 VIQAGKFDNKSTAXXXXXXXXXXXXGDTNKDDEYSGELDDEELNEILARTEDEKVLFKKI 1041
VIQAGKFDNKSTA +TN+DD+ ELDD+ELN+ LAR+ DEK+LF KI
Sbjct: 939 VIQAGKFDNKSTAEEQEAFLRRLIESETNRDDDDKAELDDDELNDTLARSADEKILFDKI 998
Query: 1042 DEERVANEKREAIDLGLRKPLPRLITKEELPSVFTEDITDHLNVEPA-AIGRIRERKRVY 1100
D+ER+ E+ +A GLR P PRLI +ELP VF EDI +H E + +GRIR++KRVY
Sbjct: 999 DKERMNQERADAKAQGLRVPPPRLIQLDELPKVFREDIEEHFKKEDSEPLGRIRQKKRVY 1058
Query: 1101 YDDGLTEEQWLQAVDNDE-DLDETIXXXXXXXXXXXXXXLG-----LESLENSVEPEESS 1154
YDDGLTEEQ+L+AV++D L++ I G +E+LEN+ E E+S
Sbjct: 1059 YDDGLTEEQFLEAVEDDNMSLEDAIKKRREARERRRLRQNGTKENEIETLENTPEASETS 1118
Query: 1155 STSNTVISA--EQAVTPARENGRTRSRRKVVATPSTTPXXXXXXXXXXXAKPVKQDAG-- 1210
N +A ++ +E +RS+R+ T + Q+ G
Sbjct: 1119 LIENNSFTAAVDEETNADKETTASRSKRRSSRKKRTISIVTAEDKENTQEESTSQENGGA 1178
Query: 1211 ------------------------PXXXXXXXXXXXXXDDAPTKRKEEPP---------- 1236
++ KR EE P
Sbjct: 1179 KVEEEVKSSSVEIINGSESKKKKPKLTVKIKLNKTTVLENNDGKRAEEKPESKSPAKKTA 1238
Query: 1237 -----LKDK-------VEALLALLRELTDPTDEHSRTFIFERLPSRKEYPDYYKVIEKPV 1284
K K VE L+ +RE D D H RT IFE+LPS+++YPDY+KVIEKP+
Sbjct: 1239 AKKTKTKSKSLGIFPTVEKLVEEMREQLDEVDSHPRTSIFEKLPSKRDYPDYFKVIEKPM 1298
Query: 1285 ALETITKKLNKKQYQSINEVKSDLETMFNNAKLYNEEGSWVFNDAEALEEFAIDWFSKN 1343
A++ I K Y+++ EV+ L+TMF NA+ YNEEGSWV+ DA+ L EF +WF ++
Sbjct: 1299 AIDIILKNCKNGTYKTLEEVRQALQTMFENARFYNEEGSWVYVDADKLNEFTDEWFKEH 1357
>YOR290c [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1703
Score = 939 bits (2426), Expect = 0.0
Identities = 521/975 (53%), Positives = 663/975 (67%), Gaps = 69/975 (7%)
Query: 255 NLGTYSLNDALDFVTKDDIPTGADDFKLRALVELKSLKMLTKQKSLRKRLIESVAAKSHN 314
NL T ++ND LD + D+ + + AL + +L++L QK++R +++ + H
Sbjct: 504 NLDT-TVNDCLDKLLNDEC---TESTRENALYDYYALQLLPLQKAVRGHVLQF---EWHQ 556
Query: 315 IIPSLRDSPYTLAAQRSIHVRPKTIVPQTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXIV 374
P L+ R+I+V+ + Q +
Sbjct: 557 NSLLTNTHPNFLSKIRNINVQDALLTNQLYKNHELLKLERKKTEAVARLKSMNKSA---I 613
Query: 375 SSINERLENDTTQRDRCYQMGRSIGNLHGHLEKDEQRRMERTAKQRLAALKSNDEEAYLK 434
+ N R + ++++ + G + H +LE+DEQ+R E+ AK+RL ALK+NDEEAY+K
Sbjct: 614 NQYNRRQD----KKNKRLKFGHRLIATHTNLERDEQKRAEKKAKERLQALKANDEEAYIK 669
Query: 435 LLDQTKDTRITHLLKQTNSFLDSLAQAVRVQQNEVR------IKRGEE-------IPPIT 481
LLDQTKDTRITHLL+QTN+FLDSL +AV+ QQ + IK E +P +
Sbjct: 670 LLDQTKDTRITHLLRQTNAFLDSLTRAVKDQQKYTKEMIDSHIKEASEEVDDLSMVPKMK 729
Query: 482 DEERE------KIDYYEVSHRIKETVDKQPSILVGGTLKEYQLKGLEWMVSLYNNHLNGI 535
DEE + +DYY V+HRIKE + KQPSILVGGTLK+YQ+KGL+WMVSL+NNHLNGI
Sbjct: 730 DEEYDDDDDNSNVDYYNVAHRIKEDIKKQPSILVGGTLKDYQIKGLQWMVSLFNNHLNGI 789
Query: 536 LADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKG 595
LADEMGLGKTIQ+ISL++YLYE+KN R P+LVIVPLST++NW+ EF KWAP+LRTI +KG
Sbjct: 790 LADEMGLGKTIQTISLLTYLYEMKNIRGPYLVIVPLSTLSNWSSEFAKWAPTLRTISFKG 849
Query: 596 NPNQRKALQHTIKMGNFDVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYT 655
+PN+RKA Q I+ G FDVVLTT+EYIIK+R LL+K W HMIIDEGHRMKNAQSKLS T
Sbjct: 850 SPNERKAKQAKIRAGEFDVVLTTFEYIIKERALLSKVKWVHMIIDEGHRMKNAQSKLSLT 909
Query: 656 LTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXX 715
L +Y RLILTGTPLQNNLPELWALLNFVLPKIFNS K+FDEWFNTPFANTG
Sbjct: 910 LNTHYHADYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKI 969
Query: 716 XXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKH 775
VIRRLHKVLRPFLLRRLKK+VEK+LPDKVEKVVKCK+S+LQQ +Y+QMLK+
Sbjct: 970 ELSEEETLLVIRRLHKVLRPFLLRRLKKDVEKELPDKVEKVVKCKMSALQQIMYQQMLKY 1029
Query: 776 NAFFIGAGTEGATKAGIKGLNNKVMQLRKICNHPFVFDEVENVINPTRENSSILYRVSGK 835
FIG G++G NN++MQL+KICNHPFVF+EVE+ INPTRE + ++RV+GK
Sbjct: 1030 RRLFIG-DQNNKKMVGLRGFNNQIMQLKKICNHPFVFEEVEDQINPTRETNDDIWRVAGK 1088
Query: 836 FELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKL 895
FELLDR+LPK KA+GHRVL+FFQMTQ+MDIMEDFLR ++KY+RLDG TK+++R+ +L+L
Sbjct: 1089 FELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLRL 1148
Query: 896 FNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRI 955
FNAPDSEY CF+LSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRI
Sbjct: 1149 FNAPDSEYLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRI 1208
Query: 956 LRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKSTAXXXXXXXXXXXXGDTNKDD-- 1013
LRLITT+SVEEVILERA +KLDIDGKVIQAGKFDNKST+ + +
Sbjct: 1209 LRLITTNSVEEVILERAYKKLDIDGKVIQAGKFDNKSTSEEQEALLRSLLDAEEERRKKR 1268
Query: 1014 ----EYSGELDDEELNEILARTEDEKVLFKKIDEERVANEKREAIDLGLRKPLPRLITKE 1069
E EL D E+NEILAR ++E + ++DE+R E+ +LG++ RL+ K
Sbjct: 1269 ESGVEEEEELKDSEINEILARNDEEMAVLTRMDEDRSKKEE----ELGVKS---RLLEKS 1321
Query: 1070 ELPSVFTEDITDHL---NVEPAAI--GR-IRERKRVYYDDGLTEEQWLQ--AVDNDEDLD 1121
ELP +++ DI L E AA+ GR RERK Y+D ++EEQWL+ V +DE D
Sbjct: 1322 ELPDIYSRDIGAELKREESESAAVYNGRGARERKTATYNDNMSEEQWLRQFEVSDDEKND 1381
Query: 1122 ETIXXXXXXXXXXXXXXLGLESLE-------------NSVEPEESSSTSNTVISAEQAVT 1168
+ G ++ N++ E+ + T + ++ + ++
Sbjct: 1382 KQARKQRTKKEDKSEAIDGNGEIKGENIDADNDGPRINNISAEDRADT-DLAMNDDDFLS 1440
Query: 1169 PARENGRTRSRRKVV 1183
R+ GR R R K V
Sbjct: 1441 KKRKAGRPRGRPKKV 1455
Score = 64.7 bits (156), Expect = 9e-10
Identities = 30/72 (41%), Positives = 43/72 (59%)
Query: 1263 IFERLPSRKEYPDYYKVIEKPVALETITKKLNKKQYQSINEVKSDLETMFNNAKLYNEEG 1322
IF PS+ YPDYY +I+ PVA + I + Y S+ E D +F+NA++YN EG
Sbjct: 1575 IFLSKPSKALYPDYYMIIKYPVAFDNINTHIETLAYNSLKETLQDFHLIFSNARIYNTEG 1634
Query: 1323 SWVFNDAEALEE 1334
S V+ D+ LE+
Sbjct: 1635 SVVYEDSLELEK 1646
>SPAC1250.01 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1199
Score = 902 bits (2332), Expect = 0.0
Identities = 559/1281 (43%), Positives = 737/1281 (56%), Gaps = 164/1281 (12%)
Query: 90 TKEQLENLIYRYRYISQY--RDHNKLEVEAIEQIFTQISDKQEEYKEXXXXXXEN-AAKD 146
T+ ++E I R++ + + +H+ E + + + E ++ ++ D
Sbjct: 8 TRNEVEETIVRWKKLKESGATEHDNTEYAQLCDVLRSAQSEIEARRDLKGHIKRCFSSVD 67
Query: 147 IQWDEKLLKEQMVSLQLLSKDINIPDGLLXXXXXXXXXXXXXXXXXQLEKVKLSVDFDET 206
++ +LK+Q+++ + LS+++ PD + V L + DE
Sbjct: 68 KNTEKLILKQQVLAYKKLSQNLPAPDDCILS-------------------VLLRLSKDEQ 108
Query: 207 SVRLGLPEALSNFRLKSGNEASLGDWEV-----------------EKIISTLIAKRIKQL 249
++ + + L N ++ G ++ + I + +R+ L
Sbjct: 109 LLQSIVKQPLQNSKVDGKVRRDFGSCQITPSAKQQRKYLQYQISEDDAIKNRMFRRMSDL 168
Query: 250 ENLPSNLGTYSLNDALDFVTKDDIPTGADDFKLRALVELKSLKMLTKQKSLRKRLIESVA 309
E+ P+ + D + + D+ D K ALVELK L+++ +Q+SLR +++
Sbjct: 169 ESYPA-----VMRDVAE-LKDDNERLNLDTIKRNALVELKKLRLIKQQESLRHQVMHCQ- 221
Query: 310 AKSHNIIPSLRDSPYTLAAQRSIHVRPKTIVPQTAXXXXXXXXXXXXXXXXXXXXXXXXX 369
P LR A +R RPK +VPQ
Sbjct: 222 -------PHLRT--IVNAVERMSCRRPK-LVPQATRLTEVLERQQRSDRERRLKQKQCDY 271
Query: 370 XXXIVS---SINERLENDTTQRDRCYQMGRSIGNLHGHLEKDEQRRMERTAKQRLAALKS 426
+ + IN R +N + R + R++ H H+EK+EQRR ER AKQRL ALK
Sbjct: 272 LQTVCAHGREINVRTKN---AQARAQKANRAVLAYHSHIEKEEQRRAERNAKQRLQALKE 328
Query: 427 NDEEAYLKLLDQTKDTRITHLLKQTNSFLDSLAQAVRVQQNEVRIKRGEEIPP--ITDEE 484
NDEEAYLKL+DQ KDTRITHLL+QT+ +LDSLA AV+VQQ++ +E + E+
Sbjct: 329 NDEEAYLKLIDQAKDTRITHLLRQTDHYLDSLAAAVKVQQSQFGESAYDEDMDRRMNPED 388
Query: 485 REKIDYYEVSHRIKETVDKQPSILVGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGK 544
KIDYY V+H I+E V +QPSILVGG LKEYQL+GL+WM+SLYNNHLNGILADEMGLGK
Sbjct: 389 DRKIDYYNVAHNIREVVTEQPSILVGGKLKEYQLRGLQWMISLYNNHLNGILADEMGLGK 448
Query: 545 TIQSISLISYLYEIKNERQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKALQ 604
TIQ+ISLI++L E K + PFLVIVPLST+TNWT+EFE+WAPS+ IVYKG P RKAL
Sbjct: 449 TIQTISLITHLIEKKRQNGPFLVIVPLSTLTNWTMEFERWAPSIVKIVYKGPPQVRKALH 508
Query: 605 HTIKMGNFDVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKN 664
++ NF V+LTTYEYIIKDRPLL++ W +MIIDEGHRMKN QSKL+ TLT YY ++
Sbjct: 509 PQVRHSNFQVLLTTYEYIIKDRPLLSRIKWIYMIIDEGHRMKNTQSKLTNTLTTYYSSRY 568
Query: 665 RLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXX 724
RLILTGTPLQNNLPELWALLNFVLP+IFNS K+FDEWFNTPFANTG
Sbjct: 569 RLILTGTPLQNNLPELWALLNFVLPRIFNSIKSFDEWFNTPFANTGGQDKMELTEEESLL 628
Query: 725 VIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGT 784
VIRRLHKVLRPFLLRRLKK+VE +LPDKVEKV++C++S LQQ+LY QM KH ++
Sbjct: 629 VIRRLHKVLRPFLLRRLKKDVEAELPDKVEKVIRCQMSGLQQKLYYQMKKHGMLYVEDAK 688
Query: 785 EGATKAGIKGLNNKVMQLRKICNHPFVFDEVENVINPTRENSSILYRVSGKFELLDRVLP 844
G K GIKGL N VMQL+KICNHPFVF++VE I+PT N +L+RVSGKFELLDR+LP
Sbjct: 689 RG--KTGIKGLQNTVMQLKKICNHPFVFEDVERSIDPTGFNYDMLWRVSGKFELLDRILP 746
Query: 845 KFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYF 904
K SGHR+LMFFQMTQ+M+IMED+L R +Y+RLDG TKA+DR+ +L +FN P +E
Sbjct: 747 KLFRSGHRILMFFQMTQIMNIMEDYLHYRQWRYLRLDGSTKADDRSKLLGVFNDPTAEVN 806
Query: 905 CFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSV 964
FLLSTRAGGLGLNLQTADTVIIFD+DWNPHQDLQAQDRAHRIGQ EVRI RLIT SV
Sbjct: 807 LFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRIYRLITEKSV 866
Query: 965 EEVILERAMQKLDIDGKVIQAGKFDNKSTAXXXXXXXXXXXXGDTNKDDEYSGELDDEEL 1024
EE IL RA KLDIDGKVIQAGKFDNKST E
Sbjct: 867 EENILARAQYKLDIDGKVIQAGKFDNKSTP----------------------------EE 898
Query: 1025 NEILARTEDEKVLFKKIDEERVANEKREAIDLGLRKPLPRLITKEELPSVFTEDITDHLN 1084
E R+ L + + E +EK E D L + L R + L TED+
Sbjct: 899 REAFLRS-----LLENENGEEENDEKGELDDDELNEILARGDDELRLFKQMTEDLE---- 949
Query: 1085 VEPAAIGRIRERKRVYYDDGLTEEQWLQAVDNDEDLDETIXXXXXXXXXXXXXXLGLESL 1144
+ G+ +E++R+ L E + + DL +
Sbjct: 950 -RESPYGKNKEKERLIQVSELPEFYQREEPEKTTDLLQE--------------------- 987
Query: 1145 ENSVEPEESSSTSNTVISAEQAVTPAR---------ENGRTRSR-RKVVATPSTTPXXXX 1194
EP + T + ++AV A+ E TR R ++ +A+ TP
Sbjct: 988 ----EPLGRGARRRTPVVYDEAVRDAQWMAEMDMESEARPTRGRPKRNIASVDETPALTL 1043
Query: 1195 XXXXXXXAKPVKQDAGPXXXXXXXXXXXXXDDAPTKRKEEPPLKDKVEALLALLRELTDP 1254
KP K+ GP T E L +V L + + + +
Sbjct: 1044 N------GKP-KKKRGPA--------------PDTLTSEHRSLLRRV--CLEIYKAVNEL 1080
Query: 1255 TDEHSRTF--IFERLPSRKEYPDYYKVIEKPVALETITKKLNKKQYQSINEVKSDLETMF 1312
D++ R +F LPS+K YPDYY +I+ P+AL+ I K +N Y+++ +KSDL TMF
Sbjct: 1081 EDDNGRPLNKLFLELPSKKLYPDYYMIIKSPIALDAIRKHINGTFYKTLEAMKSDLMTMF 1140
Query: 1313 NNAKLYNEEGSWVFNDAEALE 1333
NNA+ YNEEGS+V+ DA ++
Sbjct: 1141 NNARTYNEEGSFVYEDANKMQ 1161
>Hs21071056 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1647
Score = 698 bits (1802), Expect = 0.0
Identities = 398/889 (44%), Positives = 521/889 (57%), Gaps = 110/889 (12%)
Query: 490 YYEVSHRIKETVDKQPSILVGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSI 549
YY V+H + E VDKQ +++V G LK+YQ+KGLEW+VSLYNN+LNGILADEMGLGKTIQ+I
Sbjct: 731 YYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTI 790
Query: 550 SLISYLYEIKNERQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKALQHTIKM 609
+LI+YL E K PFL+IVPLST++NW EF+KWAPS+ + YKG+P R+A ++
Sbjct: 791 ALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRS 850
Query: 610 GNFDVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILT 669
G F+V+LTTYEYIIKD+ +LAK W +MI+DEGHRMKN KL+ L +Y RL+LT
Sbjct: 851 GKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLT 910
Query: 670 GTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRL 729
GTPLQN LPELWALLNF+LP IF S TF++WFN PFA TG +IRRL
Sbjct: 911 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTG--EKVDLNEEETILIIRRL 968
Query: 730 HKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFI-GAGTEGAT 788
HKVLRPFLLRRLKKEVE LP+KVE V+KC +S+LQ+ LY M G+ +
Sbjct: 969 HKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKG 1028
Query: 789 KAGIKGLNNKVMQLRKICNHPFVFDEVENVINPTR------ENSSILYRVSGKFELLDRV 842
K G K L N +MQLRKICNHP++F +E + LYR SGKFELLDR+
Sbjct: 1029 KGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRI 1088
Query: 843 LPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSE 902
LPK +A+ H+VL+F QMT +M IMED+ R KY+RLDG TKAEDR +LK FN P SE
Sbjct: 1089 LPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSE 1148
Query: 903 YFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTD 962
YF FLLSTRAGGLGLNLQ+ADTVIIFD+DWNPHQDLQAQDRAHRIGQ+NEVR+LRL T +
Sbjct: 1149 YFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVN 1208
Query: 963 SVEEVILERAMQKLDIDGKVIQAGKFDNKSTAXXXXXXXXXXXXGDTNKDDEY----SGE 1018
SVEE IL A KL++D KVIQAG FD KS++ + + + SG
Sbjct: 1209 SVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRHCSTGSGS 1268
Query: 1019 L----------------------------DDEELNEILARTEDEKVLFKKIDEERVANEK 1050
DDE +N+++AR E+E LF ++D +R E
Sbjct: 1269 ASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEA 1328
Query: 1051 REAIDLGLRKPLPRLITKEELPSVFTEDITDHLNV-----EPAAIGR-IRERKRVYYDDG 1104
R K PRL+ ++ELPS +D + + E GR R RK V Y D
Sbjct: 1329 RNP------KRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDS 1382
Query: 1105 LTEEQWLQAVDNDEDLDETIXXXXXXXXXXXXXXLGLESLENSVEPEESSSTSNTVISAE 1164
LTE+QWL+A++ LE +E V ++SS
Sbjct: 1383 LTEKQWLKAIEEGT----------------------LEEIEEEVRQKKSS---------- 1410
Query: 1165 QAVTPARENGRTRSRRKVVATPSTTPXXXXXXXXXXXAKPVKQDAGPXXXXXXXXXXXXX 1224
R R R + + T K K+ P
Sbjct: 1411 ----------RKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPP------------- 1447
Query: 1225 DDAPTKRKEEPPLKDKVEALLALLRELTDPTDEHSRTFIFERLPSRKEYPDYYKVIEKPV 1284
A P L K++ ++ + + D + + +F +LPSRKE P+YY++I KPV
Sbjct: 1448 --AEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPV 1505
Query: 1285 ALETITKKLNKKQYQSINEVKSDLETMFNNAKLYNEEGSWVFNDAEALE 1333
+ I +++ +Y+S+N+++ D+ + NA+ +N EGS ++ D+ L+
Sbjct: 1506 DFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQ 1554
Score = 79.0 bits (193), Expect = 5e-14
Identities = 56/231 (24%), Positives = 101/231 (43%), Gaps = 30/231 (12%)
Query: 233 EVEKIISTLIAKRIKQLENLPSNLGTYSLNDALDFVTKDDIPTGADDFKLRALVELKSLK 292
E E + IA RI++LENLP +L A D + +A +ELK+L+
Sbjct: 369 EREYRLQARIAHRIQELENLPGSL--------------------AGDLRTKATIELKALR 408
Query: 293 MLTKQKSLRKRLIESVAAKSHNIIPSLRDSPYTLAAQRSIHVRPKTIVPQTAXXXXXXXX 352
+L Q+ LR+ ++ + RD+ A + R K + A
Sbjct: 409 LLNFQRQLRQEVVVCMR----------RDTALETALNAKAYKRSKRQSLREARITEKLEK 458
Query: 353 XXXXXXXXXXXXXXXXXXXXIVSSINERLENDTTQRDRCYQMGRSIGNLHGHLEKDEQRR 412
I+ + E + + ++ +++ H + E+++++
Sbjct: 459 QQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKE 518
Query: 413 MERTAKQRLAALKSNDEEAYLKLLDQTKDTRITHLLKQTNSFLDSLAQAVR 463
ER K+R+ L + DEE Y KL+DQ KD R+ +LL+QT+ ++ +L + VR
Sbjct: 519 NERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVR 569
>7294205 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1638
Score = 682 bits (1761), Expect = 0.0
Identities = 361/654 (55%), Positives = 454/654 (69%), Gaps = 21/654 (3%)
Query: 482 DEER-EKIDYYEVSHRIKETVDKQPSILVGGTLKEYQLKGLEWMVSLYNNHLNGILADEM 540
DE R E+ YY ++H I E V +Q SI+V GTLKEYQ+KGLEW+VSLYNN+LNGILADEM
Sbjct: 741 DEYRTEEQTYYSIAHTIHEKVVEQASIMVNGTLKEYQIKGLEWLVSLYNNNLNGILADEM 800
Query: 541 GLGKTIQSISLISYLYEIKNERQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQR 600
GLGKTIQ+ISL++YL + K P+L+IVPLST+ NW +EFEKWAP++ + YKG+P R
Sbjct: 801 GLGKTIQTISLVTYLMDRKKVMGPYLIIVPLSTLPNWVLEFEKWAPAVGVVSYKGSPQGR 860
Query: 601 KALQHTIKMGNFDVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYY 660
+ LQ+ ++ F+V+LTTYEY+IKD+ +LAK W +MIIDEGHRMKN KL+ L +Y
Sbjct: 861 RLLQNQMRATKFNVLLTTYEYVIKDKAVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHY 920
Query: 661 KTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXX 720
RL+LTGTPLQN LPELWALLNF+LP IF S TF++WFN PFA TG
Sbjct: 921 IAPYRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG--EKVELNEE 978
Query: 721 XXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFI 780
+IRRLHKVLRPFLLRRLKKEVE LPDKVE ++KC +S+LQ+ LY+ M
Sbjct: 979 ETILIIRRLHKVLRPFLLRRLKKEVEHQLPDKVEYIIKCDMSALQRVLYKHMQSKGVLLT 1038
Query: 781 GAGTEGA-TKAGIKGLNNKVMQLRKICNHPFVFDEVENVINPTRENSSI-----LYRVSG 834
+G K G K L N ++QLRK+CNHPF+F +E + LYRVSG
Sbjct: 1039 DGSEKGKHGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCDHTGGHGVVSGPDLYRVSG 1098
Query: 835 KFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLK 894
KFELLDR+LPK KA+ HRVL+F QMTQ M I+ED+L R Y+RLDG TKAEDR +L+
Sbjct: 1099 KFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELLR 1158
Query: 895 LFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVR 954
FNA S+ F FLLSTRAGGLGLNLQTADTV+IFD+DWNPHQDLQAQDRAHRIGQ+NEVR
Sbjct: 1159 KFNAKGSDVFVFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVR 1218
Query: 955 ILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKSTAXXXXXXXXXXXXGDTNKDDE 1014
+LRL+T +SVEE IL A KL++D KVIQAG FD KST D N+++E
Sbjct: 1219 VLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFLQTILHQDDNEEEE 1278
Query: 1015 YSGELDDEELNEILARTEDEKVLFKKIDEERVANEKREAIDLGLRKPLPRLITKEELPSV 1074
+ DDE +N ++AR+E+E +FK++D ER K+E D + RLI + ELP
Sbjct: 1279 ENEVPDDEMINMMIARSEEEIEIFKRMDAER----KKE--DEEIHPGRERLIDESELPDW 1332
Query: 1075 FTEDITD-----HLNVEPAAIGR-IRERKRVYYDDGLTEEQWLQAVDNDEDLDE 1122
T+D + + E +GR R+RK V Y D LTE++WL+A+D+ + DE
Sbjct: 1333 LTKDDDEVERFHYQYDEDTILGRGSRQRKEVDYTDSLTEKEWLKAIDDGAEFDE 1386
Score = 80.9 bits (198), Expect = 1e-14
Identities = 55/244 (22%), Positives = 108/244 (43%), Gaps = 30/244 (12%)
Query: 233 EVEKIISTLIAKRIKQLENLPSNLGTYSLNDALDFVTKDDIPTGADDFKLRALVELKSLK 292
E E I+ I+ R+++L+ LP+ + ++D +L+A +EL++L+
Sbjct: 410 ERENRIAARISLRMQELQRLPATM--------------------SEDLRLQAAIELRALR 449
Query: 293 MLTKQKSLRKRLIESVAAKSHNIIPSLRDSPYTLAAQRSIHVRPKTIVPQTAXXXXXXXX 352
+L Q+ LR ++ RD+ A ++ R K + A
Sbjct: 450 VLNFQRQLRMEFVQCTR----------RDTTLETALNIKLYKRTKRQGLREARATEKLEK 499
Query: 353 XXXXXXXXXXXXXXXXXXXXIVSSINERLENDTTQRDRCYQMGRSIGNLHGHLEKDEQRR 412
++ + E + + +M +++ N H + E+++++
Sbjct: 500 QQKLEAERKRRQKHLEFLAAVLQHGKDLREFHRNNKAQLARMNKAVMNHHANAEREQKKE 559
Query: 413 MERTAKQRLAALKSNDEEAYLKLLDQTKDTRITHLLKQTNSFLDSLAQAVRVQQNEVRIK 472
ER K+R+ L + DEE Y KL+DQ KD R+ LL QT+ ++ +L Q V+ +++ K
Sbjct: 560 QERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTQMVKQHKDDQMKK 619
Query: 473 RGEE 476
+ EE
Sbjct: 620 KEEE 623
Score = 66.2 bits (160), Expect = 3e-10
Identities = 27/71 (38%), Positives = 50/71 (70%)
Query: 1264 FERLPSRKEYPDYYKVIEKPVALETITKKLNKKQYQSINEVKSDLETMFNNAKLYNEEGS 1323
F +LPSR+ PDYY++I++PV ++ I +++ +Y +NE++ D + NA++YNEE S
Sbjct: 1451 FMKLPSRQRLPDYYEIIKRPVDIKKILQRIEDCKYADLNELEKDFMQLCQNAQIYNEEAS 1510
Query: 1324 WVFNDAEALEE 1334
++ D+ AL++
Sbjct: 1511 LIYLDSIALQK 1521
>CE27114 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1336
Score = 672 bits (1733), Expect = 0.0
Identities = 369/759 (48%), Positives = 493/759 (64%), Gaps = 69/759 (9%)
Query: 411 RRMERTAKQRLAALKSNDEEAYLKLLDQTKDTRITHLLKQTNSFLDSLAQAVRVQQNEVR 470
R + K R+ L DEE Y +LD+ KD R+ +LL+QT+ ++ SL ++ QQN
Sbjct: 233 REEMKNEKNRIQKLIQEDEEGYRAMLDEKKDQRLVYLLEQTDDYIKSLCDLLKQQQNATA 292
Query: 471 ---------------IKRGEEIPPITDEEREKID------------YYEVSHRIKETVDK 503
+ +++ I D+ R D YY +H ++E + +
Sbjct: 293 GSLATKSYIRKEYDGVAEEDKVKSILDKARNDDDEYENKTKMNIEDYYTTAHGVREEIKE 352
Query: 504 QPSILVGGT----LKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIK 559
Q ++ GG LK YQ+KGLEWMVSL+NN+LNGILADEMGLGKTIQ+I+ I+YL EIK
Sbjct: 353 QHFMMGGGNPSLKLKPYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIAFITYLMEIK 412
Query: 560 NERQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKALQHTIKMGNFDVVLTTY 619
PFLVIVPLST+ NW EF+KWA ++ I YKG RK + IK G F+V+LTT+
Sbjct: 413 KTSGPFLVIVPLSTVPNWQNEFDKWAANVHLIAYKGPKETRKVFEPIIKSGKFNVLLTTF 472
Query: 620 EYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPE 679
EY+I+++ LL K W +MIIDEGHR+KN KL+ L ++ + RL++TGTPLQN LPE
Sbjct: 473 EYVIREKALLGKLRWKYMIIDEGHRLKNQHCKLTEMLNTRFQCQRRLLITGTPLQNKLPE 532
Query: 680 LWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLR 739
LWALLNF+LP IF+S TF++WFN PFA TG +IRRLHKVLRPFLLR
Sbjct: 533 LWALLNFLLPSIFSSCSTFEQWFNAPFATTG--EKVELTQEETMLIIRRLHKVLRPFLLR 590
Query: 740 RLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKV 799
RLKKEVE +LPDK+E VV+C +S+LQ+ LY+ M K G +G T G K L N +
Sbjct: 591 RLKKEVESELPDKMEFVVRCDMSALQKVLYKHMQK------GLLLDGKTNTGSKSLRNTM 644
Query: 800 MQLRKICNHPFVFDEVE----NVINPTRENSSILYRVSGKFELLDRVLPKFKASGHRVLM 855
+ LRK+CNHPF+F+ VE N + ++ LYRVSGK ELL R+LPK +A+GHRVLM
Sbjct: 645 IHLRKLCNHPFLFENVEESCRNFWDARFISAVDLYRVSGKLELLSRILPKLQATGHRVLM 704
Query: 856 FFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGL 915
FFQMT +M I+EDFL ++Y+RLDG TK ++R +L FNAP+SEYF F+LSTRAGGL
Sbjct: 705 FFQMTSMMTIVEDFLAGGTIQYLRLDGSTKPDERGALLDKFNAPNSEYFLFMLSTRAGGL 764
Query: 916 GLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQK 975
GLNLQTADTVIIFD+DWNPHQD+QAQDRAHRIGQK EVR+ RLIT +SVEE IL A K
Sbjct: 765 GLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKAEVRVFRLITANSVEEKILAAARYK 824
Query: 976 LDIDGKVIQAGKFDNKSTAXXXXXXXXXXXXGDTNKDDEYSGELDDEELNEILARTEDEK 1035
L++D KVIQAGKFDN+ST + N+ +E +DE++N+IL+R+E+E
Sbjct: 825 LNVDEKVIQAGKFDNRSTGAERREILENIIKTE-NESEEDEEVPNDEDINDILSRSEEEF 883
Query: 1036 VLFKKIDEERVANEKREAIDLGLRKPLPRLITKEELPS--VFTEDITD------------ 1081
LF+K+D+ER NE+ + K PRL+ ++E+P + D TD
Sbjct: 884 ELFQKMDQERFENEQAQ-------KAKPRLVGEDEIPRDILRAADETDYIEKAKEEGRVP 936
Query: 1082 HLNVEPAAIGRIRERKRVYYD-DGLTEEQWLQAVDNDED 1119
+L V P G R R+ V Y D ++++++L+ + +++D
Sbjct: 937 YLEVMP---GSRRTRREVDYSADTMSDDKFLEKLFDEDD 972
>Hs21071050 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1568
Score = 669 bits (1725), Expect = 0.0
Identities = 354/650 (54%), Positives = 448/650 (68%), Gaps = 24/650 (3%)
Query: 490 YYEVSHRIKETVDKQPSILVGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSI 549
YY V+H I E V+KQ ++L+ GTLK YQL+GLEWMVSLYNN+LNGILADEMGLGKTIQ+I
Sbjct: 697 YYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTI 756
Query: 550 SLISYLYEIKNERQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKALQHTIKM 609
+LI+YL E K P+L+IVPLST++NWT EF+KWAPS+ I YKG P R++L ++
Sbjct: 757 ALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRS 816
Query: 610 GNFDVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILT 669
G F+V+LTTYEYIIKD+ +LAK W +MI+DEGHRMKN KL+ L +Y R++LT
Sbjct: 817 GKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLT 876
Query: 670 GTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRL 729
GTPLQN LPELWALLNF+LP IF S TF++WFN PFA TG +IRRL
Sbjct: 877 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTG--ERVDLNEEETILIIRRL 934
Query: 730 HKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFI-GAGTEGAT 788
HKVLRPFLLRRLKKEVE LP+KVE V+KC +S+LQ+ LY M G+ +
Sbjct: 935 HKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKG 994
Query: 789 KAGIKGLNNKVMQLRKICNHPFVFDEVENVI------NPTRENSSILYRVSGKFELLDRV 842
K G K L N +MQLRKICNHP++F +E + N + LYR SGKFELLDR+
Sbjct: 995 KGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRI 1054
Query: 843 LPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSE 902
LPK +A+ HRVL+F QMT +M IMED+ R+ Y+RLDG TK+EDR +LK FN P S+
Sbjct: 1055 LPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQ 1114
Query: 903 YFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTD 962
YF FLLSTRAGGLGLNLQ ADTV+IFD+DWNPHQDLQAQDRAHRIGQ+NEVR+LRL T +
Sbjct: 1115 YFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVN 1174
Query: 963 SVEEVILERAMQKLDIDGKVIQAGKFDNKSTAXXXXXXXXXXXXGDTNKDDEYSGELDDE 1022
SVEE IL A KL++D KVIQAG FD KS++ + ++E DDE
Sbjct: 1175 SVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEE-DEVPDDE 1233
Query: 1023 ELNEILARTEDEKVLFKKIDEERVANEKREAIDLGLRKPLPRLITKEELPSVFTEDITDH 1082
LN+++AR E+E LF ++D +R + R K PRL+ ++ELPS +D +
Sbjct: 1234 TLNQMIARREEEFDLFMRMDMDRRREDARNP------KRKPRLMEEDELPSWIIKDDAEV 1287
Query: 1083 LNV-----EPAAIGR-IRERKRVYYDDGLTEEQWLQAVD--NDEDLDETI 1124
+ E GR R+R+ V Y D LTE+QWL+A++ N E+++E +
Sbjct: 1288 ERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEMEEEV 1337
Score = 76.6 bits (187), Expect = 2e-13
Identities = 55/230 (23%), Positives = 98/230 (41%), Gaps = 30/230 (13%)
Query: 233 EVEKIISTLIAKRIKQLENLPSNLGTYSLNDALDFVTKDDIPTGADDFKLRALVELKSLK 292
E E + IA RI++LENLP +L D + +A VELK+L+
Sbjct: 341 EREYRLQARIAHRIQELENLPGSL--------------------PPDLRTKATVELKALR 380
Query: 293 MLTKQKSLRKRLIESVAAKSHNIIPSLRDSPYTLAAQRSIHVRPKTIVPQTAXXXXXXXX 352
+L Q+ LR+ ++ + RD+ A + R K + A
Sbjct: 381 LLNFQRQLRQEVVACMR----------RDTTLETALNSKAYKRSKRQTLREARMTEKLEK 430
Query: 353 XXXXXXXXXXXXXXXXXXXXIVSSINERLENDTTQRDRCYQMGRSIGNLHGHLEKDEQRR 412
I+ + E + + ++ +++ H + E+++++
Sbjct: 431 QQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKE 490
Query: 413 MERTAKQRLAALKSNDEEAYLKLLDQTKDTRITHLLKQTNSFLDSLAQAV 462
ER K+R+ L + DEE Y KL+DQ KD R+ +LL+QT+ ++ +L V
Sbjct: 491 TERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLV 540
Score = 65.1 bits (157), Expect = 7e-10
Identities = 32/108 (29%), Positives = 62/108 (56%), Gaps = 2/108 (1%)
Query: 1228 PTKRKEEPPLKDKVEALLALLRELTDPTDEHSRTF--IFERLPSRKEYPDYYKVIEKPVA 1285
P K P + + A++ + + D R +F +LPSRKE P+YY++I KPV
Sbjct: 1367 PPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVD 1426
Query: 1286 LETITKKLNKKQYQSINEVKSDLETMFNNAKLYNEEGSWVFNDAEALE 1333
+ I +++ +Y+S+ +++ D+ + +NA+ +N EGS ++ D+ L+
Sbjct: 1427 FKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQ 1474
>Hs21071048 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1586
Score = 669 bits (1725), Expect = 0.0
Identities = 354/650 (54%), Positives = 448/650 (68%), Gaps = 24/650 (3%)
Query: 490 YYEVSHRIKETVDKQPSILVGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSI 549
YY V+H I E V+KQ ++L+ GTLK YQL+GLEWMVSLYNN+LNGILADEMGLGKTIQ+I
Sbjct: 697 YYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTI 756
Query: 550 SLISYLYEIKNERQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKALQHTIKM 609
+LI+YL E K P+L+IVPLST++NWT EF+KWAPS+ I YKG P R++L ++
Sbjct: 757 ALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRS 816
Query: 610 GNFDVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILT 669
G F+V+LTTYEYIIKD+ +LAK W +MI+DEGHRMKN KL+ L +Y R++LT
Sbjct: 817 GKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLT 876
Query: 670 GTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRL 729
GTPLQN LPELWALLNF+LP IF S TF++WFN PFA TG +IRRL
Sbjct: 877 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTG--ERVDLNEEETILIIRRL 934
Query: 730 HKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFI-GAGTEGAT 788
HKVLRPFLLRRLKKEVE LP+KVE V+KC +S+LQ+ LY M G+ +
Sbjct: 935 HKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKG 994
Query: 789 KAGIKGLNNKVMQLRKICNHPFVFDEVENVI------NPTRENSSILYRVSGKFELLDRV 842
K G K L N +MQLRKICNHP++F +E + N + LYR SGKFELLDR+
Sbjct: 995 KGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRI 1054
Query: 843 LPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSE 902
LPK +A+ HRVL+F QMT +M IMED+ R+ Y+RLDG TK+EDR +LK FN P S+
Sbjct: 1055 LPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQ 1114
Query: 903 YFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTD 962
YF FLLSTRAGGLGLNLQ ADTV+IFD+DWNPHQDLQAQDRAHRIGQ+NEVR+LRL T +
Sbjct: 1115 YFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVN 1174
Query: 963 SVEEVILERAMQKLDIDGKVIQAGKFDNKSTAXXXXXXXXXXXXGDTNKDDEYSGELDDE 1022
SVEE IL A KL++D KVIQAG FD KS++ + ++E DDE
Sbjct: 1175 SVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEE-DEVPDDE 1233
Query: 1023 ELNEILARTEDEKVLFKKIDEERVANEKREAIDLGLRKPLPRLITKEELPSVFTEDITDH 1082
LN+++AR E+E LF ++D +R + R K PRL+ ++ELPS +D +
Sbjct: 1234 TLNQMIARREEEFDLFMRMDMDRRREDARNP------KRKPRLMEEDELPSWIIKDDAEV 1287
Query: 1083 LNV-----EPAAIGR-IRERKRVYYDDGLTEEQWLQAVD--NDEDLDETI 1124
+ E GR R+R+ V Y D LTE+QWL+A++ N E+++E +
Sbjct: 1288 ERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEMEEEV 1337
Score = 76.6 bits (187), Expect = 2e-13
Identities = 55/230 (23%), Positives = 98/230 (41%), Gaps = 30/230 (13%)
Query: 233 EVEKIISTLIAKRIKQLENLPSNLGTYSLNDALDFVTKDDIPTGADDFKLRALVELKSLK 292
E E + IA RI++LENLP +L D + +A VELK+L+
Sbjct: 341 EREYRLQARIAHRIQELENLPGSL--------------------PPDLRTKATVELKALR 380
Query: 293 MLTKQKSLRKRLIESVAAKSHNIIPSLRDSPYTLAAQRSIHVRPKTIVPQTAXXXXXXXX 352
+L Q+ LR+ ++ + RD+ A + R K + A
Sbjct: 381 LLNFQRQLRQEVVACMR----------RDTTLETALNSKAYKRSKRQTLREARMTEKLEK 430
Query: 353 XXXXXXXXXXXXXXXXXXXXIVSSINERLENDTTQRDRCYQMGRSIGNLHGHLEKDEQRR 412
I+ + E + + ++ +++ H + E+++++
Sbjct: 431 QQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKE 490
Query: 413 MERTAKQRLAALKSNDEEAYLKLLDQTKDTRITHLLKQTNSFLDSLAQAV 462
ER K+R+ L + DEE Y KL+DQ KD R+ +LL+QT+ ++ +L V
Sbjct: 491 TERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLV 540
Score = 64.3 bits (155), Expect = 1e-09
Identities = 26/71 (36%), Positives = 50/71 (69%)
Query: 1263 IFERLPSRKEYPDYYKVIEKPVALETITKKLNKKQYQSINEVKSDLETMFNNAKLYNEEG 1322
+F +LPSRKE P+YY++I KPV + I +++ +Y+S+ +++ D+ + +NA+ +N EG
Sbjct: 1422 VFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEG 1481
Query: 1323 SWVFNDAEALE 1333
S ++ D+ L+
Sbjct: 1482 SQIYEDSIVLQ 1492
>CE05553 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1474
Score = 644 bits (1662), Expect = 0.0
Identities = 346/666 (51%), Positives = 449/666 (66%), Gaps = 34/666 (5%)
Query: 473 RGEEIPPITDEEREKIDYYEVSHRIKETVDKQPSILVGGT----LKEYQLKGLEWMVSLY 528
R EE +++ DYY +H+IKE V KQ + + GG LK YQ+KGLEWMVSLY
Sbjct: 489 RNEEDEYDQKTKKQMADYYATAHKIKEKVVKQHTTMGGGDPNLLLKPYQIKGLEWMVSLY 548
Query: 529 NNHLNGILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLSTITNWTIEFEKWAPSL 588
NN+LNGILADEMGLGKTIQ+ISL++YL E+K P+LVIVPLST++NW EF KWAPS+
Sbjct: 549 NNNLNGILADEMGLGKTIQTISLVTYLMEVKQNNGPYLVIVPLSTLSNWQNEFAKWAPSV 608
Query: 589 RTIVYKGNPNQRKALQHTIKMGNFDVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNA 648
TI+YKG + R+ ++ I+ G F+V++TTYEY+IK++ LL K W +MIIDEGHR+KN
Sbjct: 609 TTIIYKGTKDARRRVEGQIRKGAFNVLMTTYEYVIKEKALLGKIRWKYMIIDEGHRLKNH 668
Query: 649 QSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFAN 708
KL+ L ++ ++RL+LTGTPLQN LPELWALLNF+LP IF+S TF++WFN PFA
Sbjct: 669 NCKLTLMLNGFFHAQHRLLLTGTPLQNKLPELWALLNFLLPSIFSSCGTFEQWFNAPFAT 728
Query: 709 TGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQL 768
TG +IRRLHKVLRPFLLRRLKKEVE LPDK E V+KC S+LQ+ +
Sbjct: 729 TG--EKVELNQEETMLIIRRLHKVLRPFLLRRLKKEVESQLPDKTEYVIKCDQSALQKVI 786
Query: 769 YEQMLKHNAFFIGAGTEGATKAGIKGLNNKVMQLRKICNHPFVFDEVENVINP----TRE 824
Y M K G + +G + L N V+ LRK+CNHPF+F +E+
Sbjct: 787 YRHMQK------GLLLDAKMSSGARSLMNTVVHLRKLCNHPFLFPNIEDSCRAYWKVNEV 840
Query: 825 NSSILYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGT 884
N + L RV+GK ELLDR+LPK KA+GHR+LMFFQMT +M+I EDFL R Y+RLDG T
Sbjct: 841 NGTDLMRVAGKLELLDRILPKLKATGHRILMFFQMTSMMNIFEDFLNFRRYTYLRLDGST 900
Query: 885 KAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRA 944
K ++R +L FNAP+S+ F F+LSTRAGGLGLNLQTADTVIIFD+DWNPHQD+QAQDRA
Sbjct: 901 KPDERGDLLTQFNAPNSDLFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRA 960
Query: 945 HRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKSTAXXXXXXXXXX 1004
HRIGQK EVR+LRLIT +SVEE IL A KL++D KVIQAGKFD +ST
Sbjct: 961 HRIGQKKEVRVLRLITANSVEEKILAAARYKLNVDEKVIQAGKFDQRSTGAERKQMLEQI 1020
Query: 1005 XXGDTNKDDEYSGELDDEELNEILARTEDEKVLFKKIDEERVANEKREAIDLGLRKPLPR 1064
D +++E DDE +N+++AR+E+E +F+ +D +R +RE + RK PR
Sbjct: 1021 IQADGEEEEEEEVP-DDETVNQMVARSEEEFNIFQSMDIDR----RREEANQLHRK--PR 1073
Query: 1065 LITKEELPSVFTEDITDHLNVEPA-----------AIGRIRERKRVYYDDGLTEEQWLQA 1113
L+ + E+P + D+ +E A R R R+ Y D L++EQ+++
Sbjct: 1074 LLEEHEIPDDILKLSFDYEEMERAREEGREVVDQTPNQRRRRREVDYSSDLLSDEQFMKQ 1133
Query: 1114 VDNDED 1119
V+ ED
Sbjct: 1134 VEEVED 1139
Score = 80.9 bits (198), Expect = 1e-14
Identities = 39/113 (34%), Positives = 67/113 (58%), Gaps = 1/113 (0%)
Query: 1230 KRKEEPPLKDKVEALLALLRELTDPTDEHSRTFIFERLPSRKEYPDYYKVIEKPVALETI 1289
K+K +P L +K+ +L ++ E + E +F+ LP+RKE PDYY+VI KP+ + I
Sbjct: 1175 KKKTDPELAEKINEMLDVILEYKNEDGELIAD-VFQTLPTRKELPDYYQVISKPMDFDRI 1233
Query: 1290 TKKLNKKQYQSINEVKSDLETMFNNAKLYNEEGSWVFNDAEALEEFAIDWFSK 1342
KK+ +Y + E+ D+ + NNA+ YNEEGS ++ +E + + + + K
Sbjct: 1234 NKKIETGRYTVMEELNDDMNLLVNNAQTYNEEGSEIYVSSETIGKLWKEQYDK 1286
Score = 68.2 bits (165), Expect = 9e-11
Identities = 59/242 (24%), Positives = 98/242 (40%), Gaps = 30/242 (12%)
Query: 235 EKIISTLIAKRIKQLENLPSNLGTYSLNDALDFVTKDDIPTGADDFKLRALVELKSLKML 294
E +I I R+K L NLP+ DIP D KL+A +EL++L+++
Sbjct: 183 ENMIQNRIGLRMKLLNNLPA-----------------DIP---DHMKLKAEIELRALRLV 222
Query: 295 TKQKSLRKRLIESVAAKSHNIIPSLRDSPYTLAAQRSIHVRPKTIVPQTAXXXXXXXXXX 354
Q +R ++ + RD+ A + R K + A
Sbjct: 223 NLQTQVRSEVMACLK----------RDTTLETALNPYAYRRTKRQSLREARVTEKLEKQQ 272
Query: 355 XXXXXXXXXXXXXXXXXXIVSSINERLENDTTQRDRCYQMGRSIGNLHGHLEKDEQRRME 414
I+ E E + + +++ H + E++ ++
Sbjct: 273 KMEQERKRRQKHTDLMQAIIQHGKEFKEYHRNNLLKMAKSRKAVMTYHQNNERERKKDEI 332
Query: 415 RTAKQRLAALKSNDEEAYLKLLDQTKDTRITHLLKQTNSFLDSLAQAVRVQQNEVRIKRG 474
R K R+ L DEE Y LLD+ KD R+ +LL+QT+ ++DSL VR QN + K+
Sbjct: 333 RNEKLRMQKLMQEDEEGYRALLDEKKDQRLVYLLQQTDEYVDSLCSLVRQHQNTEKKKKK 392
Query: 475 EE 476
E+
Sbjct: 393 ED 394
>At3g06010 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1132
Score = 615 bits (1585), Expect = e-175
Identities = 348/793 (43%), Positives = 491/793 (61%), Gaps = 73/793 (9%)
Query: 373 IVSSINE-RLENDTTQRDRCYQMGRSIGNLHGHLEKDEQRRMERTAKQRLAALKSNDEEA 431
+++++ E +L+ TQ+ R Q + HG +++R R K RL ALKS+D+EA
Sbjct: 262 VLNAVREFQLQIQATQKRR-RQRNDGVQAWHGR----QRQRATRAEKLRLMALKSDDQEA 316
Query: 432 YLKLLDQTKDTRITHLLKQTNSFLDSLAQAVRVQQNEVRIKRGEEIPPITDEEREKID-- 489
Y+KL+ ++K+ R+T LL++TN L +L AV+ +Q + ++ G ++ ++ + ++D
Sbjct: 317 YMKLVKESKNERLTTLLEETNKLLANLGAAVQ-RQKDAKLPEGIDLLKDSESDLSELDAP 375
Query: 490 ----------------------------------YYEVSHRIKETVDKQPSILVGGTLKE 515
Y H I+E V +QPS+L GG L+
Sbjct: 376 RSEPLQDLLPDQDIDITESDNNDDSNDLLEGQRQYNSAIHSIQEKVTEQPSLLEGGELRS 435
Query: 516 YQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLSTIT 575
YQL+GL+WMVSL+NN+LNGILADEMGLGKTIQ+ISLI+YL E K P+L++ P + +
Sbjct: 436 YQLEGLQWMVSLFNNNLNGILADEMGLGKTIQTISLIAYLLENKGVPGPYLIVAPKAVLP 495
Query: 576 NWTIEFEKWAPSLRTIVYKGNPNQRKALQHTIK-MGNFDVVLTTYEYIIKDRPLLAKHDW 634
NW EF W PS+ +Y G +RKA++ I G F+V++T Y+ I++D+ L K +W
Sbjct: 496 NWVNEFATWVPSIAAFLYDGRLEERKAIREKIAGEGKFNVLITHYDLIMRDKAFLKKIEW 555
Query: 635 AHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNS 694
+MI+DEGHR+KN +S L+ TL Y+ K RL+LTGTP+QN+L ELW+LLNF+LP IFNS
Sbjct: 556 YYMIVDEGHRLKNHESALAKTLLTGYRIKRRLLLTGTPIQNSLQELWSLLNFLLPHIFNS 615
Query: 695 SKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVE 754
+ F+EWFN PFA+ G +I RLH V+RPF+LRR K EVEK LP K +
Sbjct: 616 VQNFEEWFNAPFADRGNVSLTDEEELL---IIHRLHHVIRPFILRRKKDEVEKFLPGKTQ 672
Query: 755 KVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKVMQLRKICNHPFVFDE 814
++KC +S+ Q+ Y+Q+ + G+ + K L N MQLRK CNHP++F
Sbjct: 673 VILKCDMSAWQKVYYKQVTDMGRVGLQTGSGKS-----KSLQNLTMQLRKCCNHPYLF-- 725
Query: 815 VENVINPTRENSSILYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRD 874
V N ++ + R SGKFELLDR+LPK + +GHR+L+F QMT+++D++E +L + D
Sbjct: 726 VGGDYNMWKKPEIV--RASGKFELLDRLLPKLRKAGHRILLFSQMTRLIDVLEIYLTLND 783
Query: 875 LKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNP 934
KY+RLDG TK + R +LK FN PDS YF FLLSTRAGGLGLNLQTADTVIIFD+DWNP
Sbjct: 784 YKYLRLDGTTKTDQRGLLLKQFNEPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNP 843
Query: 935 HQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKSTA 994
D QA+DRAHRIGQK EVR+ L++ SVEEVILERA QK+ ID KVIQAG F+ STA
Sbjct: 844 QMDQQAEDRAHRIGQKKEVRVFVLVSVGSVEEVILERAKQKMGIDAKVIQAGLFNTTSTA 903
Query: 995 XXXXXXXXXXXXGDTNKDDEYSGELDDEELNEILARTEDEKVLFKKIDEERVANEKREAI 1054
T+ + + E+N + AR+EDE +F+++DEER E A
Sbjct: 904 QDRREMLEEIMRKGTSSLG--TDVPSEREINRLAARSEDEFWMFERMDEERRRKENYRA- 960
Query: 1055 DLGLRKPLPRLITKEELP--SVFTEDITDHLNVEPAAIGRI---RERKRVYYDDGLTEEQ 1109
RL+ ++E+P + T+ + LN G + R+RK + Y D L+E Q
Sbjct: 961 ---------RLMQEQEVPEWAYTTQTQEEKLNNGKFHFGSVTGKRKRKEIVYSDTLSELQ 1011
Query: 1110 WLQAVDNDEDLDE 1122
WL+AV++ EDL +
Sbjct: 1012 WLKAVESGEDLSK 1024
>At5g19310 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1041
Score = 595 bits (1533), Expect = e-169
Identities = 348/818 (42%), Positives = 482/818 (58%), Gaps = 51/818 (6%)
Query: 390 RCYQMGRSIGNLHGHLEKDEQRRMERTAKQRLAALKSNDEEAYLKL---LDQTKDTRI-- 444
RC Q + HG +++R R K R+ ALKS+D+E Y+KL + + KD ++
Sbjct: 237 RCKQRNDGVQAWHGK----QRQRATRAEKLRIMALKSDDQEEYMKLAKEIQRQKDAKLSE 292
Query: 445 -THLLKQTNSFLDSL-AQAVRVQQNEVRIKRGEEIPPITDEEREKIDYYEVSHRIKETVD 502
T LLK + S L + A + ++ I + D + + H I+E V
Sbjct: 293 NTKLLKGSESDLSDVDAPEDVLPAQDIEIIDSDNNDDSNDLLEGERQFNLAIHSIQEKVT 352
Query: 503 KQPSILVGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNER 562
KQPS+L GG L+ YQL+GL+WMVSLYNN NGILADEMGLGKTIQ+I+LI+YL E K+
Sbjct: 353 KQPSLLQGGELRSYQLEGLQWMVSLYNNDYNGILADEMGLGKTIQTIALIAYLLESKDLH 412
Query: 563 QPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKALQHTIKMGNFDVVLTTYEYI 622
P L++ P + + NW EF WAPS+ +Y G+ +R ++ I G F+V++T Y+ I
Sbjct: 413 GPHLILAPKAVLPNWENEFALWAPSISAFLYDGSKEKRTEIRARIAGGKFNVLITHYDLI 472
Query: 623 IKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWA 682
++D+ L K DW +MI+DEGHR+KN + L+ TL Y+ K RL+LTGTP+QN+L ELW+
Sbjct: 473 MRDKAFLKKIDWNYMIVDEGHRLKNHECALAKTLGTGYRIKRRLLLTGTPIQNSLQELWS 532
Query: 683 LLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLK 742
LLNF+LP IFNS F+EWFNTPFA G +I RLH V+RPFLLRR K
Sbjct: 533 LLNFLLPHIFNSIHNFEEWFNTPFAECG---SASLTDEEELLIINRLHHVIRPFLLRRKK 589
Query: 743 KEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKVMQL 802
EVEK LP K + ++KC +S+ Q+ Y+Q+ + +G + K L N MQL
Sbjct: 590 SEVEKFLPGKTQVILKCDMSAWQKLYYKQVTDVGRVGLHSGNGKS-----KSLQNLTMQL 644
Query: 803 RKICNHPFVFDEVENVINPTRENSSILYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQV 862
RK CNHP++F + + E + R SGKFELLDR+LPK K +GHR+L+F QMT++
Sbjct: 645 RKCCNHPYLFVGADYNMCKKPE----IVRASGKFELLDRLLPKLKKAGHRILLFSQMTRL 700
Query: 863 MDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTA 922
+D++E +L + D Y+RLDG TK + R +LK FN PDS YF FLLSTRAGGLGLNLQTA
Sbjct: 701 IDLLEIYLSLNDYMYLRLDGSTKTDQRGILLKQFNEPDSPYFMFLLSTRAGGLGLNLQTA 760
Query: 923 DTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKV 982
DT+IIFD+DWNP D QA+DRAHRIGQK EVR+ L++ S+EEVILERA QK+ ID KV
Sbjct: 761 DTIIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSIGSIEEVILERAKQKMGIDAKV 820
Query: 983 IQAGKFDNKSTAXXXXXXXXXXXXGDTNKDDEYSGELDDEELNEILARTEDEKVLFKKID 1042
IQAG F+ STA T+ E + E+N + ARTE+E +F+++D
Sbjct: 821 IQAGLFNTTSTAQDRREMLEEIMSKGTSSLGE--DVPSEREINRLAARTEEEFWMFEQMD 878
Query: 1043 EERVANEKREAIDLGLRKPLPRLITKEELP-----SVFTEDITDHLNVEPAAIGRIRERK 1097
EER E + RL+ ++E+P S ED T+ N + G+ R+RK
Sbjct: 879 EERRKKENYKT----------RLMEEKEVPEWAYTSETQEDKTNAKNHFGSLTGK-RKRK 927
Query: 1098 RVYYDDGLTEEQWLQAVDNDEDLDETIXXXXXXXXXXXXXXLG-------LESLENSVEP 1150
Y D L++ QW++A++++++ + G ES E E
Sbjct: 928 EAVYSDSLSDLQWMKAMESEDEDASKVSQKRKRTDTKTRMSNGSKAEAVLSESDEEKEEE 987
Query: 1151 EESSSTSNTVISAEQAVTPA---RENGRTRSRRKVVAT 1185
EE + S E+ P + N + RSR V+ +
Sbjct: 988 EEERKEESGKESEEENEKPLHSWKTNKKKRSRYPVMTS 1025
>At2g28290 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1339
Score = 555 bits (1430), Expect = e-157
Identities = 311/725 (42%), Positives = 437/725 (59%), Gaps = 73/725 (10%)
Query: 379 ERLEN-DTTQRDRCYQMGRSIGNLHGHLEKDEQRRMERTAKQRLAALKSNDEEAYLKLLD 437
E+LE+ +R+R R H E+ + ++++ ++++ LK ND E YL+++
Sbjct: 618 EKLEDLFKVRRERLKGFNRYAKEFHKRKERLHREKIDKIQREKINLLKINDVEGYLRMVQ 677
Query: 438 QTKDTRITHLLKQTNSFLDSLAQAVRV----------QQNEVRIKRGEEIPPITDEEREK 487
K R+ LLK+T +L L ++ + +E R + + + E E
Sbjct: 678 DAKSDRVKQLLKETEKYLQKLGSKLKEAKLLTSRFENEADETRTSNATDDETLIENEDES 737
Query: 488 ID------------------------------YYEVSHRIKETVDKQPSILVGGTLKEYQ 517
YY ++H IKE +++QPS LVGG L+EYQ
Sbjct: 738 DQAKASYISAFFHLFLMVMIHTIQHYLESNEKYYLMAHSIKENINEQPSSLVGGKLREYQ 797
Query: 518 LKGLEWMVSLYNNHLNGILADEMGLGKTIQS--------ISLISYLYEIKNERQPFLVIV 569
+ GL W+VSLYNNHLNGILADEMGLGKT+Q ISLI YL E KN+R PFLV+V
Sbjct: 798 MNGLRWLVSLYNNHLNGILADEMGLGKTVQMGLGKTVQVISLICYLMETKNDRGPFLVVV 857
Query: 570 PLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKAL-QHTIKMGNFDVVLTTYEYIIK--DR 626
P S + W E WAPS+ IVY G P++R+ L + I F+V+LTTYEY++ DR
Sbjct: 858 PSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKEQIVHQKFNVLLTTYEYLMNKHDR 917
Query: 627 PLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNF 686
P L+K W ++IIDEGHR+KNA KL+ L HY + +RL+LTGTPLQNNL ELWALLNF
Sbjct: 918 PKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSS-HRLLLTGTPLQNNLEELWALLNF 976
Query: 687 VLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVE 746
+LP IFNSS+ F +WFN PF + G +I RLH+VLRPF+LRRLK +VE
Sbjct: 977 LLPNIFNSSEDFSQWFNKPFQSNGESSALLSEEENLL-IINRLHQVLRPFVLRRLKHKVE 1035
Query: 747 KDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKVMQLRKIC 806
+LP+K+E++++C+ S+ Q+ L +++ + G+ G K+ + ++N VM+LR IC
Sbjct: 1036 NELPEKIERLIRCEASAYQKLLMKRVEDN------LGSIGNAKS--RAVHNSVMELRNIC 1087
Query: 807 NHPFV--FDEVENVINPTRENSSILYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMD 864
NHP++ E+ + P + R+ GK E+LDR+LPK KA+ HRVL F MT+++D
Sbjct: 1088 NHPYLSQLHSEEHFLPP-------IVRLCGKLEMLDRMLPKLKATDHRVLFFSTMTRLLD 1140
Query: 865 IMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADT 924
+MED+L ++ KY+RLDG T DR ++ FN S +F FLLS RAGG+G+NLQ ADT
Sbjct: 1141 VMEDYLTLKGYKYLRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQAADT 1200
Query: 925 VIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQ 984
VI+FDTDWNP DLQAQ RAHRIGQK +V +LR T +SVEE + A KL + + I
Sbjct: 1201 VILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSIT 1260
Query: 985 AGKFDNKSTAXXXXXXXXXXXXGDTNKDDEYSGELDDEELNEILARTEDEKVLFKKIDEE 1044
AG FDN ++A +K +E + LDD+ LN+++AR E E +F+ ID++
Sbjct: 1261 AGFFDNNTSAEDRKEYLESLLR--ESKKEEDAPVLDDDALNDLIARRESEIDIFESIDKQ 1318
Query: 1045 RVANE 1049
R NE
Sbjct: 1319 RKENE 1323
>7303422 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1027
Score = 480 bits (1235), Expect = e-135
Identities = 280/658 (42%), Positives = 384/658 (57%), Gaps = 40/658 (6%)
Query: 405 LEKDEQRRMERTAKQRLAALKSNDEEA-YLKLLDQTKDTRITHLLKQTNSFL----DSLA 459
+E E+ E T+ A S ++EA + ++ + R LLKQT F +S
Sbjct: 9 VEATEENSNETTSDA--ATSSSGEKEAEFDNKIEADRSRRFDFLLKQTEIFTHFMTNSAK 66
Query: 460 QAVRVQQNEVRIKRGEEIPPITDEEREKIDYYEVSHRIKET--------VDKQPSILVGG 511
+ + +IK ++ + D K + E + E D P+ + G
Sbjct: 67 SPTKPKGRPKKIKDKDKEKDVADHRHRKTEQEEDEELLAEDSATKEIFRFDASPAYIKSG 126
Query: 512 TLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPL 571
+++YQ++GL WM+SLY N +NGILADEMGLGKT+Q+ISL+ YL KN+ P +VIVP
Sbjct: 127 EMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIVPK 186
Query: 572 STITNWTIEFEKWAPSLRTIVYKGNPNQRKALQHTIKM-GNFDVVLTTYEYIIKDRPLLA 630
ST+ NW EF+KW PSLR + G+ + R + M G +DV +T+YE I+++ +
Sbjct: 187 STLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDVLMPGEWDVCVTSYEMCIREKSVFK 246
Query: 631 KHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPK 690
K +W +++IDE HR+KN +SKLS L + KT NRL++TGTPLQNNL ELWALLNF+LP
Sbjct: 247 KFNWRYLVIDEAHRIKNEKSKLSEILREF-KTANRLLITGTPLQNNLHELWALLNFLLPD 305
Query: 691 IFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLP 750
+FNSS+ FDEWFNT NT +I RLH VL+PFLLRRLK EVEK L
Sbjct: 306 VFNSSEDFDEWFNT---NT---------CLGDDALITRLHAVLKPFLLRRLKAEVEKRLK 353
Query: 751 DKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKVMQLRKICNHPF 810
K E + LS +Q+ Y ++L + + GA K L N +MQLRK NHP+
Sbjct: 354 PKKEMKIFVGLSKMQRDWYTKVLLKDIDVVN----GAGKVEKMRLQNILMQLRKCTNHPY 409
Query: 811 VFDEVENVINPTRENSSILYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFL 870
+FD E P + L SGK +LD++LPK + G RVL+F QMT+++DI+ED+
Sbjct: 410 LFDGAEP--GPPYTTDTHLVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYC 467
Query: 871 RMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDT 930
R+ Y RLDG T EDR ++ FN +S F F+LSTRAGGLG+NL TAD VII+D+
Sbjct: 468 HWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGLGINLATADVVIIYDS 527
Query: 931 DWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKF-D 989
DWNP DLQA DRAHRIGQK +VR+ RLIT +VEE I+ERA KL +D VIQ G+ D
Sbjct: 528 DWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGRLVD 587
Query: 990 NKSTAXXXXXXXXXXXXGDTNKDDEYSGELDDEELNEIL----ARTEDEKVLFKKIDE 1043
N+S G ++ DE+++ IL A+T ++K + E
Sbjct: 588 NRSNQLNKDEMLNIIRFGANQVFSSKETDITDEDIDVILERGEAKTAEQKAALDSLGE 645
>At3g06400 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1057
Score = 475 bits (1222), Expect = e-133
Identities = 277/705 (39%), Positives = 406/705 (57%), Gaps = 42/705 (5%)
Query: 406 EKDEQRRMERTAKQRLAALKSNDEEAYLKLLDQTKDTRITHLLKQTNSFLDSLAQAVRVQ 465
EK + M++ KQ++ + + + ++ R+ +LL+QT F
Sbjct: 80 EKARLKEMQKLKKQKIQEMLESQNASIDADMNNKGKGRLKYLLQQTELFAHFAKSDGSSS 139
Query: 466 QNEVRIKRGEEIPPITDEEREKIDYYEVSHRIKETVDK----QPSILVGGTLKEYQLKGL 521
Q + + RG IT+EE ++ E + + + QPS + G +++YQL GL
Sbjct: 140 QKKAK-GRGRHASKITEEEEDEEYLKEEEDGLTGSGNTRLLTQPSC-IQGKMRDYQLAGL 197
Query: 522 EWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLSTITNWTIEF 581
W++ LY N +NGILADEMGLGKT+Q+ISL++YL+E + P +V+ P ST+ NW E
Sbjct: 198 NWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAPKSTLGNWMNEI 257
Query: 582 EKWAPSLRTIVYKGNPNQRKALQHTIKM-GNFDVVLTTYEYIIKDRPLLAKHDWAHMIID 640
++ P LR + + GNP +R+ ++ + + G FD+ +T++E IK++ L + W ++IID
Sbjct: 258 RRFCPVLRAVKFLGNPEERRHIREDLLVAGKFDICVTSFEMAIKEKTALRRFSWRYIIID 317
Query: 641 EGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDE 700
E HR+KN S LS T+ + T RL++TGTPLQNNL ELWALLNF+LP+IF+S++TFDE
Sbjct: 318 EAHRIKNENSLLSKTM-RLFSTNYRLLITGTPLQNNLHELWALLNFLLPEIFSSAETFDE 376
Query: 701 WFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCK 760
WF N V+++LHKVLRPFLLRRLK +VEK LP K E ++K
Sbjct: 377 WFQISGEND------------QQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVG 424
Query: 761 LSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKVMQLRKICNHPFVFDEVENVIN 820
+S +Q+Q Y+ +L+ + + AG E K L N MQLRK CNHP++F E
Sbjct: 425 MSQMQKQYYKALLQKDLEAVNAGGER------KRLLNIAMQLRKCCNHPYLFQGAEP--G 476
Query: 821 PTRENSSILYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRL 880
P L +GK LLD++LPK K RVL+F QMT+++DI+ED+L R Y R+
Sbjct: 477 PPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYRGYLYCRI 536
Query: 881 DGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQA 940
DG T ++R ++ +N P SE F FLLSTRAGGLG+NL TAD VI++D+DWNP DLQA
Sbjct: 537 DGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQA 596
Query: 941 QDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKF-DNKSTAXXXXX 999
QDRAHRIGQK EV++ R T ++EE ++ERA +KL +D VIQ G+ + KS +
Sbjct: 597 QDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQQGRLAEQKSKSVNKDE 656
Query: 1000 XXXXXXXGDTNKDDEYSGELDDEELNEILARTEDE----KVLFKKIDEERVANEKREAID 1055
G + DE+++ I+A+ E+ KK E+ + + ++ D
Sbjct: 657 LLQMVRYGAEMVFSSKDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIQFKMDDSAD 716
Query: 1056 LGLRKPLPRLITKEELPSVFTEDITDHLNVEPAAIGRIRERKRVY 1100
K+E F + ++D+ N P RERKR Y
Sbjct: 717 FYDFDD----DNKDENKLDFKKIVSDNWNDPPK-----RERKRNY 752
>At5g18620 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1063
Score = 464 bits (1193), Expect = e-130
Identities = 273/696 (39%), Positives = 404/696 (57%), Gaps = 56/696 (8%)
Query: 426 SNDEEAYLKLLDQTKDTRITHLLKQTNSFLDS------LAQAVRVQQNEVRIK---RGEE 476
S E+A LK + + K +I +L N+ +D+ A + + + K RG
Sbjct: 82 SKREKARLKEMQKMKKQKIQQILDSQNASIDADMQTELFAHFAKSDPSPSQKKGKGRGRH 141
Query: 477 IPPITDEEREKIDYYEVSHRIKET----VDKQPSILVGGTLKEYQLKGLEWMVSLYNNHL 532
+T+EE ++ E I + + QP+ + G L++YQL GL W++ LY N +
Sbjct: 142 SSKLTEEEEDEECLKEEEGGIVGSGGTRLLTQPAC-IQGKLRDYQLAGLNWLIRLYENGI 200
Query: 533 NGILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLSTITNWTIEFEKWAPSLRTIV 592
NGILADEMGLGKT+Q+ISL++YL+E + P +V+ P ST+ NW E ++ P LR +
Sbjct: 201 NGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVK 260
Query: 593 YKGNPNQRKALQHTIKM-GNFDVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSK 651
+ GNP +R+ ++ + + G FD+ +T++E IK++ L + W ++IIDE HR+KN S
Sbjct: 261 FLGNPEERRHIREELLVAGKFDICVTSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSL 320
Query: 652 LSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGX 711
LS T+ + T RL++TGTPLQNNL ELWALLNF+LP++F+S++TFDEWF N
Sbjct: 321 LSKTM-RLFSTNYRLLITGTPLQNNLHELWALLNFLLPEVFSSAETFDEWFQISGEND-- 377
Query: 712 XXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQ 771
V+++LHKVLRPFLLRRLK +VEK LP K E ++K +S +Q+Q Y+
Sbjct: 378 ----------QQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKA 427
Query: 772 MLKHNAFFIGAGTEGATKAGIKGLNNKVMQLRKICNHPFVFDEVENVINPTRENSSILYR 831
+L+ + + G E K L N MQLRK CNHP++F E P L
Sbjct: 428 LLQKDLEVVNGGGER------KRLLNIAMQLRKCCNHPYLFQGAEP--GPPYTTGDHLVT 479
Query: 832 VSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTG 891
+GK LLD++LPK K RVL+F QMT+++DI+ED+L R +Y R+DG T ++R
Sbjct: 480 NAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDERDA 539
Query: 892 MLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKN 951
++ +N P SE F FLLSTRAGGLG+NL TAD VI++D+DWNP DLQAQDRAHRIGQK
Sbjct: 540 SIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKK 599
Query: 952 EVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKSTAXXXXXXXXXXXXGD--- 1008
EV++ R T +++E ++ERA +KL +D VIQ G+ + T +
Sbjct: 600 EVQVFRFCTENAIEAKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRYGAEMVF 659
Query: 1009 TNKDDEYSGELDDEELNEILARTEDE----KVLFKKIDEERVANEKREAIDLGLRKPLPR 1064
++KD + DE+++ I+A+ E+ KK E+ + + ++ D
Sbjct: 660 SSKD----STITDEDIDRIIAKGEEATAELDAKMKKFTEDAIQFKMDDSADFYDFDD--- 712
Query: 1065 LITKEELPSVFTEDITDHLNVEPAAIGRIRERKRVY 1100
K+E F + ++++ N P RERKR Y
Sbjct: 713 -DNKDESKVDFKKIVSENWNDPPK-----RERKRNY 742
>Hs21071058 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1052
Score = 461 bits (1185), Expect = e-129
Identities = 257/623 (41%), Positives = 369/623 (58%), Gaps = 40/623 (6%)
Query: 429 EEAYLKLLDQTKDTRITHLLKQTNSFLDSLAQA--------VRVQQNEVRIKRGEEIPPI 480
+ Y + + + R +LLKQT F + A ++++ RIK+ E+ +
Sbjct: 77 DPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQNLL 136
Query: 481 T-----------DEEREKIDYYEVSHRIKETVDKQPSILVGGTLKEYQLKGLEWMVSLYN 529
+ +E+ E + + + + PS + G L++YQ++GL W++SLY
Sbjct: 137 SVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYE 196
Query: 530 NHLNGILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLSTITNWTIEFEKWAPSLR 589
N +NGILADEMGLGKT+Q+ISL+ Y+ +N P +V+VP ST+ NW EF++W P+LR
Sbjct: 197 NGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLR 256
Query: 590 TIVYKGNPNQRKALQHTIKM-GNFDVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNA 648
++ G+ QR A + + G +DV +T+YE +IK++ + K +W +++IDE HR+KN
Sbjct: 257 SVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNE 316
Query: 649 QSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFAN 708
+SKLS + +KT NRL+LTGTPLQNNL ELW+LLNF+LP +FNS+ FD WF+T
Sbjct: 317 KSKLS-EIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDT---- 371
Query: 709 TGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQL 768
++ RLH VLRPFLLRR+K +VEK LP K E + LS +Q++
Sbjct: 372 --------NNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREW 423
Query: 769 YEQMLKHNAFFIGAGTEGATKAGIKGLNNKVMQLRKICNHPFVFDEVENVINPTRENSSI 828
Y ++L + + + A K L N +MQLRK CNHP++FD E P
Sbjct: 424 YTRILMKDIDILNS----AGKMDKMRLLNILMQLRKCCNHPYLFDGAEP--GPPYTTDMH 477
Query: 829 LYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAED 888
L SGK +LD++LPK K G RVL+F QMT+V+DI+ED+ R+ +Y RLDG T ++
Sbjct: 478 LVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDE 537
Query: 889 RTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIG 948
R + +N P+S F F+LSTRAGGLG+NL TAD VI++D+DWNP DLQA DRAHRIG
Sbjct: 538 RQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIG 597
Query: 949 QKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKF-DNKSTAXXXXXXXXXXXXG 1007
Q VR+ R IT ++VEE I+ERA KL +D VIQ G+ D G
Sbjct: 598 QTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHG 657
Query: 1008 DTNKDDEYSGELDDEELNEILAR 1030
T+ E+ DE+++ IL R
Sbjct: 658 ATHVFASKESEITDEDIDGILER 680
>Hs21071044 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1054
Score = 455 bits (1171), Expect = e-127
Identities = 269/666 (40%), Positives = 385/666 (57%), Gaps = 58/666 (8%)
Query: 406 EKDEQRRMERTA--KQRLAALKSNDEEA----YLKLLDQTKDTRITHLLKQTNSFLD--- 456
EK E+++ + + + +LAA E+ Y + + + R LLKQT F
Sbjct: 51 EKGEKKKEKNVSSFQLKLAAKAPKSEKEMDPEYEEKMKADRAKRFEFLLKQTELFAHFIQ 110
Query: 457 -----SLAQAVRVQQNEVRIKRGEEIPPIT-----------DEEREKIDYYEVSHRIKET 500
S + ++ RIK+ E+ I+ +E+ E + + +
Sbjct: 111 PSAQKSPTSPLNMKLGRPRIKKDEKQSLISAGDYRHRRTEQEEDEELLSESRKTSNVCIR 170
Query: 501 VDKQPSILVGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKN 560
+ PS + GG L++YQ++GL W++SLY N +NGILADEMGLGKT+Q+I+L+ YL +N
Sbjct: 171 FEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRN 230
Query: 561 ERQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKA-LQHTIKMGNFDVVLTTY 619
P +V+VP ST+ NW EF++W PSLR I + G+ + R A ++ + G +DV +T+Y
Sbjct: 231 IPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSY 290
Query: 620 EYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPE 679
E +IK++ + K W +++IDE HR+KN +SKLS + +K+ NRL+LTGTPLQNNL E
Sbjct: 291 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLS-EIVREFKSTNRLLLTGTPLQNNLHE 349
Query: 680 LWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLR 739
LWALLNF+LP +FNS+ FD WF+T ++ RLH VL+PFLLR
Sbjct: 350 LWALLNFLLPDVFNSADDFDSWFDTKNC------------LGDQKLVERLHAVLKPFLLR 397
Query: 740 RLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKV 799
R+K +VEK LP K E + LS +Q++ Y ++L + + + + K L N +
Sbjct: 398 RIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNS----SGKMDKMRLLNIL 453
Query: 800 MQLRKICNHPFVFDEVENVINPTRENSSILYRVSGKFELLDRVLPKFKASGHRVLMFFQM 859
MQLRK CNHP++FD E P + SGK +LD++L K K G RVL+F QM
Sbjct: 454 MQLRKCCNHPYLFDGAEP--GPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 511
Query: 860 TQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGM------------LKLFNAPDSEYFCFL 907
T+++DI+ED+ R +Y RLDG T E+R ++ FNAP+S F F+
Sbjct: 512 TRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFM 571
Query: 908 LSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEV 967
LSTRAGGLG+NL +AD VI++D+DWNP DLQA DRAHRIGQK VR+ RLIT ++VEE
Sbjct: 572 LSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEER 631
Query: 968 ILERAMQKLDIDGKVIQAGK-FDNKSTAXXXXXXXXXXXXGDTNKDDEYSGELDDEELNE 1026
I+ERA KL +D VIQ G+ D +S G T+ EL DE++
Sbjct: 632 IVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMIRHGATHVFASKESELTDEDITT 691
Query: 1027 ILARTE 1032
IL R E
Sbjct: 692 ILERGE 697
>YOR304w [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1120
Score = 454 bits (1169), Expect = e-127
Identities = 245/551 (44%), Positives = 347/551 (62%), Gaps = 25/551 (4%)
Query: 441 DTRITHLLKQTNSFLDSLAQAVRVQQNEVR----IKRGEEIPPITDEEREKIDYYEVSHR 496
D I LLKQ +S + L+++ + R ++ E+ + DEE E +D Y+
Sbjct: 112 DKNIQKLLKQLDSDANKLSKSHSTVSSSSRHHRKTEKEEDAELMADEEEEIVDTYQEDIF 171
Query: 497 IKETVDKQPSILVGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLY 556
+ E+ PS + G L++YQ++GL W++SL+ N L+GILADEMGLGKT+Q+IS + YL
Sbjct: 172 VSES----PSFVKSGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLR 227
Query: 557 EIKNERQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKALQHTIKM-GNFDVV 615
+K PFL+IVP ST+ NW EF KW P++ +V G+ + R + I + FDV+
Sbjct: 228 YVKQIEGPFLIIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIVRNIILEARFDVL 287
Query: 616 LTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQN 675
+T+YE +I+++ L + W +++IDE HR+KN QS LS + +Y +KNRL++TGTPLQN
Sbjct: 288 ITSYEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFY-SKNRLLITGTPLQN 346
Query: 676 NLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRP 735
NL ELWALLNF+LP IF S+ FDEWF VI++LH VL P
Sbjct: 347 NLHELWALLNFLLPDIFGDSELFDEWFEQ-----------NNSEQDQEIVIQQLHSVLNP 395
Query: 736 FLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGL 795
FLLRR+K +VEK L K+E V ++ +Q Q Y+ +L+ + + + G L
Sbjct: 396 FLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAV--GKREGKTRL 453
Query: 796 NNKVMQLRKICNHPFVFDEVENVINPTRENSSILYRVSGKFELLDRVLPKFKASGHRVLM 855
N VMQLRK CNHP++F+ E P L SGK +LD++L + K G RVL+
Sbjct: 454 LNIVMQLRKCCNHPYLFEGAEP--GPPYTTDEHLIFNSGKMIILDKLLKRLKEKGSRVLI 511
Query: 856 FFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGL 915
F QM++++DI+ED+ RD +Y R+DG T E+R + +N P+SE F FLL+TRAGGL
Sbjct: 512 FSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPNSEKFVFLLTTRAGGL 571
Query: 916 GLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQK 975
G+NL TADTVI+FD+DWNP DLQA DRAHRIGQK +V + R +T +++EE ++ERA QK
Sbjct: 572 GINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQK 631
Query: 976 LDIDGKVIQAG 986
L +D VIQ G
Sbjct: 632 LRLDQLVIQQG 642
>CE00789 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 971
Score = 451 bits (1160), Expect = e-126
Identities = 250/554 (45%), Positives = 340/554 (61%), Gaps = 28/554 (5%)
Query: 502 DKQPSILVGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNE 561
DK P + G +++YQ++GL W+ SL +N +NGILADEMGLGKT+Q+IS+I Y+ KN+
Sbjct: 83 DKSPFYIENGEMRDYQVRGLNWLASLQHNKINGILADEMGLGKTLQTISMIGYMKHYKNK 142
Query: 562 RQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQR-KALQHTIKMGNFDVVLTTYE 620
P LVIVP ST+ NW EF+KW PS+ +V G+ R + L+ I FDV TTYE
Sbjct: 143 ASPHLVIVPKSTLQNWANEFKKWCPSINAVVLIGDEAARNQVLRDVILPQKFDVCCTTYE 202
Query: 621 YIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPEL 680
++K + L K +W ++IIDE HR+KN +SKLS T+ ++NRL++TGTPLQNNL EL
Sbjct: 203 MMLKVKTQLKKLNWRYIIIDEAHRIKNEKSKLSETVREL-NSENRLLITGTPLQNNLHEL 261
Query: 681 WALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRR 740
WALLNF+LP IF SS FD WF+ +++RLHKVL+PFLLRR
Sbjct: 262 WALLNFLLPDIFTSSDDFDSWFSND------------AMSGNTDLVQRLHKVLQPFLLRR 309
Query: 741 LKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKVM 800
+K +VEK L K E V LS +Q++ Y ++L + I GA K L N +M
Sbjct: 310 IKSDVEKSLLPKKEVKVYVGLSKMQREWYTKVLMKDIDIIN----GAGKVEKARLMNILM 365
Query: 801 QLRKICNHPFVFDEVENVINPTRENSSILYRVSGKFELLDRVLPKFKASGHRVLMFFQMT 860
LRK NHP++FD E P L SGK +LD++L KFK G RVL+F Q +
Sbjct: 366 HLRKCVNHPYLFDGAEP--GPPFTTDQHLVDNSGKMVVLDKLLMKFKEQGSRVLIFSQFS 423
Query: 861 QVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQ 920
+++D++EDF R +Y RLDG T EDR+ ++ +NAPDS+ F F+L+TRAGGLG+NL
Sbjct: 424 RMLDLLEDFCWWRHYEYCRLDGSTPHEDRSNAIEAYNAPDSKKFIFMLTTRAGGLGINLA 483
Query: 921 TADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDG 980
TAD VII+D+DWNP DLQA DRAHRIGQK +VR+ RLIT ++V+E I+E+A KL +D
Sbjct: 484 TADVVIIYDSDWNPQSDLQAMDRAHRIGQKKQVRVFRLITENTVDERIIEKAEAKLRLDN 543
Query: 981 KVIQAGKFDNKSTAXXXXXXXXXXXXGDTNKDDEYSGELDDEELNEILARTE------DE 1034
VIQ G+ G + D++++ IL + E +E
Sbjct: 544 IVIQQGRMSEAQKTLGKGDMISMIRHGAEQVFAAKDSTISDDDIDTILEKAEVKTAELNE 603
Query: 1035 KVLFKKIDEERVAN 1048
K+ KIDE + N
Sbjct: 604 KM--GKIDENNLRN 615
>At2g46020 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1245
Score = 433 bits (1114), Expect = e-121
Identities = 245/599 (40%), Positives = 345/599 (56%), Gaps = 50/599 (8%)
Query: 490 YYEVSHRIKETVDKQPSILVGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSI 549
YY ++H + E V +QPS+L GTL++YQL GL+WM+SLYNN LNGILADEMGLGKT+Q +
Sbjct: 11 YYTLAHAVNEVVVRQPSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVM 70
Query: 550 SLISYLYEIKNERQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKALQHTIKM 609
+LI+YL E K P L+IVP + + NW E W PS+ I Y G +QR L +K
Sbjct: 71 ALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFSQVKF 130
Query: 610 GNFDVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILT 669
F+V++TTYE+I+ DR L+K DW ++IIDE RMK+ +S L+ L Y+ + RL+LT
Sbjct: 131 EKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDR-YRCQRRLLLT 189
Query: 670 GTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXX---XXXXXXXXVI 726
GTPLQN+L ELW+LLN +LP +F++ K F +WF PF G VI
Sbjct: 190 GTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVIVI 249
Query: 727 RRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTE- 785
RLH++L PF+LRR ++VE LP KV V++C++S++Q +Y+ + + E
Sbjct: 250 HRLHQILEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPDDEK 309
Query: 786 -GATKAGI------KGLNNKVMQLRKICNHPFVFDEVENVINPTRENSSILYRVSGKFEL 838
A K I + LNN+ M+LRK CNHP + N + L R GK +
Sbjct: 310 LRAQKNPIYQAKIYRTLNNRCMELRKACNHPLLNYPYFNDF-----SKDFLVRSCGKLWI 364
Query: 839 LDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNA 898
LDR+L K + +GHRVL+F MT+++DI+E++L+ R L Y R+DG T EDR + FN
Sbjct: 365 LDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFND 424
Query: 899 PDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRL 958
PD++ F FLLS RA G GLNLQTADTV+I+D D NP + QA RAHRIGQ EV+++ +
Sbjct: 425 PDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVIYM 484
Query: 959 ITT--------------------------------DSVEEVILERAMQ-KLDIDGKVIQA 985
S+E +I Q K+D+ +VI A
Sbjct: 485 EAVVEKLSSHQKEDELRSGGSVDLEDDMAGKDRYIGSIEGLIRNNIQQYKIDMADEVINA 544
Query: 986 GKFDNKSTAXXXXXXXXXXXXGDTNKDDEYSGELDDEELNEILARTEDEKVLFKKIDEE 1044
G+FD ++T + + E+N ++AR+E+E LF ++DEE
Sbjct: 545 GRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLHEVNRMIARSEEEVELFDQMDEE 603
>YBR245c [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1129
Score = 433 bits (1113), Expect = e-120
Identities = 242/580 (41%), Positives = 356/580 (60%), Gaps = 43/580 (7%)
Query: 482 DEEREKIDYYEVSHRIKET-VDKQPSI---------LVGGTLKEYQLKGLEWMVSLYNNH 531
D R K ++ E + +KE D SI V G L+ YQ++G+ W+VSL+ N
Sbjct: 155 DVRRRKTEHEEDAELLKEEDSDDDESIEFQFRESPAYVNGQLRPYQIQGVNWLVSLHKNK 214
Query: 532 LNGILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLSTITNWTIEFEKWAPSLRTI 591
+ GILADEMGLGKT+Q+IS + YL I+ PFLVI P ST+ NW E +W P +
Sbjct: 215 IAGILADEMGLGKTLQTISFLGYLRYIEKIPGPFLVIAPKSTLNNWLREINRWTPDVNAF 274
Query: 592 VYKGNPNQRKALQHTIKMG-NFDVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQS 650
+ +G+ +R L +G +FDVV+ +YE II+++ L K +W ++IIDE HR+KN +S
Sbjct: 275 ILQGDKEERAELIQKKLLGCDFDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEES 334
Query: 651 KLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTG 710
LS L + ++NRL++TGTPLQNNL ELWALLNF+LP IF+ ++ FD+WF++
Sbjct: 335 MLSQVLREF-TSRNRLLITGTPLQNNLHELWALLNFLLPDIFSDAQDFDDWFSSE----- 388
Query: 711 XXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYE 770
++++LH VL+PFLLRR+K +VE L K E + +SS+Q++ Y+
Sbjct: 389 ------STEEDQDKIVKQLHTVLQPFLLRRIKSDVETSLLPKKELNLYVGMSSMQKKWYK 442
Query: 771 QMLKHNAFFIGAGTEGATKAGIKGLNNKVMQLRKICNHPFVFDEVENVINPTRENSSILY 830
++L+ + + G+ G+ ++ + L N +MQLRK CNHP++FD E P L
Sbjct: 443 KILEKDLDAVN-GSNGSKESKTR-LLNIMMQLRKCCNHPYLFDGAEP--GPPYTTDEHLV 498
Query: 831 RVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRT 890
+ K ++LD++L K K G RVL+F QM++++DI+ED+ R+ +Y R+DG T EDR
Sbjct: 499 YNAAKLQVLDKLLKKLKEEGSRVLIFSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRI 558
Query: 891 GMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQK 950
+ +NAPDS+ F FLL+TRAGGLG+NL +AD V+++D+DWNP DLQA DRAHRIGQK
Sbjct: 559 QAIDDYNAPDSKKFVFLLTTRAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQK 618
Query: 951 NEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAG-----KFDNKSTAXXXXXXXXXXX 1005
+V++ RL+T +SVEE ILERA QKL +D VIQ K +NK+ +
Sbjct: 619 KQVKVFRLVTDNSVEEKILERATQKLRLDQLVIQQNRTSLKKKENKADSKDALLSMIQHG 678
Query: 1006 XGDTNKDDEYSGEL-----------DDEELNEILARTEDE 1034
D K +G DD +L+E+L ++E++
Sbjct: 679 AADVFKSGTSTGSAGTPEPGSGEKGDDIDLDELLLKSENK 718
>At2g13370 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1738
Score = 425 bits (1092), Expect = e-118
Identities = 234/556 (42%), Positives = 341/556 (61%), Gaps = 43/556 (7%)
Query: 501 VDKQPSILVGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKN 560
+D+QP L+GGTL++YQL+GL ++V+ + N N ILADEMGLGKT+QS+S++ +L +
Sbjct: 629 LDEQPEWLIGGTLRDYQLEGLNFLVNSWLNDTNVILADEMGLGKTVQSVSMLGFLQNTQQ 688
Query: 561 ERQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKALQHTI---KMGN---FDV 614
PFLV+VPLST+ NW EF KW P + IVY G R+ T K+G F+
Sbjct: 689 IPGPFLVVVPLSTLANWAKEFRKWLPGMNIIVYVGTRASREVRNKTNDVHKVGRPIKFNA 748
Query: 615 VLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQ 674
+LTTYE ++KD+ +L+K W ++++DE HR+KN++++L YT + TKN+L++TGTPLQ
Sbjct: 749 LLTTYEVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQL-YTALLEFSTKNKLLITGTPLQ 807
Query: 675 NNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLR 734
N++ ELWALL+F+ P F + F E + + LH LR
Sbjct: 808 NSVEELWALLHFLDPGKFKNKDEFVENYKN-------------LSSFNESELANLHLELR 854
Query: 735 PFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKG 794
P +LRR+ K+VEK LP K+E++++ ++S LQ+Q Y+ +L+ N + G G +
Sbjct: 855 PHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVS---- 910
Query: 795 LNNKVMQLRKICNHPFVFDEVENVINPTRENSSILYRV---SGKFELLDRVLPKFKASGH 851
L N V++L+K CNHPF+F+ ++ ++S L ++ SGK +LD++L + + + H
Sbjct: 911 LLNIVVELKKCCNHPFLFESADHGYGGDINDNSKLDKIILSSGKLVILDKLLVRLRETKH 970
Query: 852 RVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTR 911
RVL+F QM +++DI+ ++L +R ++ RLDG TKAE R + FNAP S+ FCFLLSTR
Sbjct: 971 RVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQAMDHFNAPASDDFCFLLSTR 1030
Query: 912 AGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILER 971
AGGLG+NL TADTV+IFD+DWNP DLQA RAHRIGQ+ V I R +T+ SVEE ILER
Sbjct: 1031 AGGLGINLATADTVVIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEEILER 1090
Query: 972 AMQKLDIDGKVIQ---------------AGKFDNKSTAXXXXXXXXXXXXGDTNKDDEYS 1016
A +K+ +D VIQ FD + D N D+E
Sbjct: 1091 AKRKMVLDHLVIQKLNAEGRLEKRETKKGSNFDKNELSAILRFGAEELFKEDKN-DEESK 1149
Query: 1017 GELDDEELNEILARTE 1032
L +++EIL R E
Sbjct: 1150 KRLLSMDIDEILERAE 1165
>Hs21071046 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1033
Score = 419 bits (1077), Expect = e-116
Identities = 257/666 (38%), Positives = 369/666 (54%), Gaps = 79/666 (11%)
Query: 406 EKDEQRRMERTA--KQRLAALKSNDEEA----YLKLLDQTKDTRITHLLKQTNSFLD--- 456
EK E+++ + + + +LAA E+ Y + + + R LLKQT F
Sbjct: 51 EKGEKKKEKNVSSFQLKLAAKAPKSEKEMDPEYEEKMKADRAKRFEFLLKQTELFAHFIQ 110
Query: 457 -----SLAQAVRVQQNEVRIKRGEEIPPIT-----------DEEREKIDYYEVSHRIKET 500
S + ++ RIK+ E+ I+ +E+ E + + +
Sbjct: 111 PSAQKSPTSPLNMKLGRPRIKKDEKQSLISAGDYRHRRTEQEEDEELLSESRKTSNVCIR 170
Query: 501 VDKQPSILVGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKN 560
+ PS + GG L++YQ++GL W++SLY N +NGILADE+
Sbjct: 171 FEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEIP------------------- 211
Query: 561 ERQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKA-LQHTIKMGNFDVVLTTY 619
P +V+VP ST+ NW EF++W PSLR I + G+ + R A ++ + G +DV +T+Y
Sbjct: 212 --GPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSY 269
Query: 620 EYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPE 679
E +IK++ + K W +++IDE HR+KN +SKLS + +K+ NRL+LTGTPLQNNL E
Sbjct: 270 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLS-EIVREFKSTNRLLLTGTPLQNNLHE 328
Query: 680 LWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLR 739
LWALLNF+LP +FNS+ FD WF+T ++ RLH VL+PFLLR
Sbjct: 329 LWALLNFLLPDVFNSADDFDSWFDTKNC------------LGDQKLVERLHAVLKPFLLR 376
Query: 740 RLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKV 799
R+K +VEK LP K E + LS +Q++ Y ++L + + + + K L N +
Sbjct: 377 RIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNS----SGKMDKMRLLNIL 432
Query: 800 MQLRKICNHPFVFDEVENVINPTRENSSILYRVSGKFELLDRVLPKFKASGHRVLMFFQM 859
MQLRK CNHP++FD E P + SGK +LD++L K K G RVL+F QM
Sbjct: 433 MQLRKCCNHPYLFDGAEP--GPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 490
Query: 860 TQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGM------------LKLFNAPDSEYFCFL 907
T+++DI+ED+ R +Y RLDG T E+R ++ FNAP+S F F+
Sbjct: 491 TRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFM 550
Query: 908 LSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEV 967
LSTRAGGLG+NL +AD VI++D+DWNP DLQA DRAHRIGQK VR+ RLIT ++VEE
Sbjct: 551 LSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEER 610
Query: 968 ILERAMQKLDIDGKVIQAGK-FDNKSTAXXXXXXXXXXXXGDTNKDDEYSGELDDEELNE 1026
I+ERA KL +D VIQ G+ D +S G T+ EL DE++
Sbjct: 611 IVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMIRHGATHVFASKESELTDEDITT 670
Query: 1027 ILARTE 1032
IL R E
Sbjct: 671 ILERGE 676
>Hs4557449 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1739
Score = 416 bits (1068), Expect = e-115
Identities = 265/697 (38%), Positives = 386/697 (55%), Gaps = 61/697 (8%)
Query: 503 KQPSILVGGTL--KEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKN 560
KQP+ L G L ++YQL+GL W+ + + + ILADEMGLGKTIQ+IS +SYL+
Sbjct: 472 KQPAYLGGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQ 531
Query: 561 ERQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKALQH------TIKMGNFDV 614
PFL++VPLST+T+W EFE WAP + +VY G+ R ++ K F+
Sbjct: 532 LYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNA 591
Query: 615 VLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQ 674
++TTYE ++KD+ +L +WA + +DE HR+KN S L TL + K+ +RL++TGTPLQ
Sbjct: 592 LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDF-KSNHRLLITGTPLQ 650
Query: 675 NNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLR 734
N+L ELW+LL+F++P+ F + F+E N + LHKVL
Sbjct: 651 NSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENG----------------YQSLHKVLE 694
Query: 735 PFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKG 794
PFLLRR+KK+VEK LP KVE++++ ++S+LQ+Q Y+ +L N + GT G+T G
Sbjct: 695 PFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTS----G 750
Query: 795 LNNKVMQLRKICNHPFVFDEVENVINPTRENSS----ILYRVSGKFELLDRVLPKFKASG 850
N VM+L+K CNH ++ E REN L R SGK LLD++L + + G
Sbjct: 751 FLNIVMELKKCCNHCYLIKPPEE---NERENGQEILLSLIRSSGKLILLDKLLTRLRERG 807
Query: 851 HRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLST 910
+RVL+F QM +++DI+ ++L ++ + RLDG K E R L FNA SE FCFLLST
Sbjct: 808 NRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLST 867
Query: 911 RAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILE 970
RAGGLG+NL +ADTV+IFD+DWNP DLQAQ RAHRIGQK +V I RL+T +VEE I+E
Sbjct: 868 RAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIE 927
Query: 971 RAMQKLDIDGKVIQAGKFDNKSTAXXXXXXXXXXXXGDTNKDDEYSGELDDEELNEILAR 1030
RA +K+ +D VIQ ++ + N S + EEL IL
Sbjct: 928 RAKKKMVLDHLVIQRMDTTGRTIL-------------ENNSGRSNSNPFNKEELTAILKF 974
Query: 1031 TEDEKVLFKKIDEERVANEKREAIDLGLRKPLPRLITKEELPSVFTEDITDHLNVEPAAI 1090
++ LFK+++ E ++ + ID LR R + E+ + T+++ V A
Sbjct: 975 GAED--LFKELEGEESEPQEMD-IDEILRLAETR---ENEVSTSATDELLSQFKVANFAT 1028
Query: 1091 ----GRIRERKRVYYDDGLTEEQ--WLQAVDNDEDLDETIXXXXXXXXXXXXXXLGLESL 1144
+ ER +D+ + EEQ ++ + ++L+E +S
Sbjct: 1029 MEDEEELEERPHKDWDEIIPEEQRKKVEEEERQKELEEIYMLPRIRSSTKKAQTNDSDSD 1088
Query: 1145 ENSVEPEESSSTSNTVISAEQAVTPARENGRTRSRRK 1181
S + SS S + + GR RS RK
Sbjct: 1089 TESKRQAQRSSASESETEDSDDDKKPKRRGRPRSVRK 1125
>YER164w [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1468
Score = 410 bits (1054), Expect = e-114
Identities = 233/559 (41%), Positives = 328/559 (57%), Gaps = 44/559 (7%)
Query: 499 ETVDKQPSILVGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEI 558
E + QP + GG L+++QL G+ WM L++ NGILADEMGLGKT+Q+++ IS+L
Sbjct: 362 EKLSVQPPFIKGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFA 421
Query: 559 KNERQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKALQHTI----------K 608
+ + P +++VPLST+ W FEKWAP L I Y GN R ++ K
Sbjct: 422 RRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFYTNPRAKGKK 481
Query: 609 MGNFDVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLIL 668
F+V+LTTYEYI+KDR L W M +DE HR+KNA+S L Y + +K NR+++
Sbjct: 482 TMKFNVLLTTYEYILKDRAELGSIKWQFMAVDEAHRLKNAESSL-YESLNSFKVANRMLI 540
Query: 669 TGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRR 728
TGTPLQNN+ EL AL+NF++P F + D F N I
Sbjct: 541 TGTPLQNNIKELAALVNFLMPGRFTIDQEID------FENQDEEQEEY---------IHD 585
Query: 729 LHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGAT 788
LH+ ++PF+LRRLKK+VEK LP K E++++ +LS +Q + Y+ +L N + AG +G
Sbjct: 586 LHRRIQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTAGAKG-- 643
Query: 789 KAGIKGLNNKVMQLRKICNHPFVFDEVENVI-------NPTRENSSI-LYRVSGKFELLD 840
G L N + +L+K NHP++FD E + TREN L SGK LLD
Sbjct: 644 --GHFSLLNIMNELKKASNHPYLFDNAEERVLQKFGDGKMTRENVLRGLIMSSGKMVLLD 701
Query: 841 RVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPD 900
++L + K GHRVL+F QM +++DI+ D+L ++ + + RLDG + R + FN+PD
Sbjct: 702 QLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPD 761
Query: 901 SEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLIT 960
S F FLLSTRAGGLG+NL TADTV+IFD+DWNP DLQA RAHRIGQKN V + RL++
Sbjct: 762 SNDFVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVS 821
Query: 961 TDSVEEVILERAMQKLDIDGKVIQAGKFD-NKSTA-----XXXXXXXXXXXXGDTNKDDE 1014
D+VEE +LERA +K+ ++ +I G D NK T G+ +
Sbjct: 822 KDTVEEEVLERARKKMILEYAIISLGVTDGNKYTKKNEPNAGELSAILKFGAGNMFTATD 881
Query: 1015 YSGELDDEELNEILARTED 1033
+L+D L+++L ED
Sbjct: 882 NQKKLEDLNLDDVLNHAED 900
>Hs4557447 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1709
Score = 407 bits (1045), Expect = e-113
Identities = 252/640 (39%), Positives = 368/640 (57%), Gaps = 61/640 (9%)
Query: 503 KQPSILVGGT---LKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIK 559
KQPS + G L++YQL GL W+ + + ILADEMGLGKTIQ+IS ++YL+
Sbjct: 468 KQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEH 527
Query: 560 NERQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKALQ------HTIKMGNFD 613
PFL++VPLST+T+W E + WA + +VY G+ N R ++ H K F+
Sbjct: 528 QLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWTHHQTKRLKFN 587
Query: 614 VVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPL 673
++LTTYE ++KD+ L +WA + +DE HR+KN S L TL +K+ +RL++TGTPL
Sbjct: 588 ILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLID-FKSNHRLLITGTPL 646
Query: 674 QNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVL 733
QN+L ELW+LL+F++P+ F+S + F+E LHK L
Sbjct: 647 QNSLKELWSLLHFIMPEKFSSWEDFEE----------------EHGKGREYGYASLHKEL 690
Query: 734 RPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIK 793
PFLLRR+KK+VEK LP KVE++++ ++S+LQ+Q Y+ +L N + G++G+T
Sbjct: 691 EPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGST----S 746
Query: 794 GLNNKVMQLRKICNHPFVFDEVE-NVINPTRENSSILYRVSGKFELLDRVLPKFKASGHR 852
G N +M+L+K CNH ++ + N +E L R SGK LLD++L + + G+R
Sbjct: 747 GFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNR 806
Query: 853 VLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRA 912
VL+F QM +++DI+ ++L+ R + RLDG K E R L FNA SE FCFLLSTRA
Sbjct: 807 VLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRA 866
Query: 913 GGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERA 972
GGLG+NL +ADTV+IFD+DWNP DLQAQ RAHRIGQK +V I RL+T SVEE ILERA
Sbjct: 867 GGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERA 926
Query: 973 MQKLDIDGKVIQAGKFDNKSTAXXXXXXXXXXXXGDTNKDDEYSGELDDEELNEILARTE 1032
+K+ +D VIQ K+ T S + EEL+ IL
Sbjct: 927 KKKMVLDHLVIQRMDTTGKTVL-------------HTGSAPSSSTPFNKEELSAILKFGA 973
Query: 1033 DEKVLFKKIDEERVANEKREAIDLGLRKPLPRLITKEELPSVFTE--------DITDHLN 1084
+E LFK+ + E++E ++ + + L R T E P T + + N
Sbjct: 974 EE--LFKEPE-----GEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQFKVANFSN 1026
Query: 1085 VEPAAIGRIRERKRVYYDDGLTEEQ--WLQAVDNDEDLDE 1122
++ I ER +++ + E+Q L+ + ++L+E
Sbjct: 1027 MDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEE 1066
>7295870 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1883
Score = 404 bits (1039), Expect = e-112
Identities = 284/825 (34%), Positives = 423/825 (50%), Gaps = 108/825 (13%)
Query: 501 VDKQPSILVGG-TLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIK 559
+ QP L G TL++YQ+ GL W++ + + ILADEMGLGKTIQ+I + L++I
Sbjct: 515 IKNQPEFLSSGLTLRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIH 574
Query: 560 NERQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKALQH------TIKMGNFD 613
+ PFL +VPLST+T W EF+ WAP + + Y G+ R+ +Q + K F+
Sbjct: 575 HLYGPFLCVVPLSTMTAWQREFDLWAPDMNVVTYLGDIKSRELIQQYEWQFESSKRLKFN 634
Query: 614 VVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPL 673
+LTTYE ++KD+ L WA +++DE HR+KN S L +L + T +RL++TGTPL
Sbjct: 635 CILTTYEIVLKDKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKEF-DTNHRLLITGTPL 693
Query: 674 QNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVL 733
QN+L ELWALL+F++P FD W N + RLH+ L
Sbjct: 694 QNSLKELWALLHFIMPD------KFDTWENFEVQHGNAEDKGYT----------RLHQQL 737
Query: 734 RPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIK 793
P++LRR+KK+VEK LP KVE++++ +++SLQ+Q Y+ +L N + G G+T +
Sbjct: 738 EPYILRRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNFDALRKGKRGSTSTFL- 796
Query: 794 GLNNKVMQLRKICNHPFVFDEVENVINPTRENSSI--LYRVSGKFELLDRVLPKFKASGH 851
N V++L+K CNH + E + +++ ++ L + SGK LLD++L + K +GH
Sbjct: 797 ---NIVIELKKCCNHAALIRPSEFELMGLQQDEALQTLLKGSGKLVLLDKLLCRLKETGH 853
Query: 852 RVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTR 911
RVL+F QM +++D++ D+L+ R + RLDG K E R L FNA S+ FCFLLSTR
Sbjct: 854 RVLIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAEGSQDFCFLLSTR 913
Query: 912 AGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILER 971
AGGLG+NL TADTVIIFD+DWNP DLQAQ RAHRIGQKN+V I RL+T SVEE I+ER
Sbjct: 914 AGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVER 973
Query: 972 AMQKLDIDGKVIQAGKFDNKSTAXXXXXXXXXXXXGDTNKDDEYSGELDDEELNEILART 1031
A QK+ +D VIQ + T NKDD L+ IL
Sbjct: 974 AKQKMVLDHLVIQRMDTTGR-TVLDKSGNGHSSNSNPFNKDD----------LSAILKFG 1022
Query: 1032 EDEKVLFKKIDEERVANEKREAIDLGLRKPLPRLITKEELPSVFTEDITDHLNVEPAAIG 1091
+E LFK DE+ E + + + + L R T+ E P + +D+ V A+I
Sbjct: 1023 AEE--LFK--DEQ----EHDDDLVCDIDEILRRAETRNEDPEMPADDLLSAFKV--ASIA 1072
Query: 1092 RIRERKRVYYDDGLTEEQWLQAVDNDE--DLDETIXXXXXXXXXXXXXXLGLESLENSVE 1149
E D ++++ A + D+ D D+ I E +++
Sbjct: 1073 AFEEEP----SDSVSKQDQNAAGEEDDSKDWDDIIP----------------EGFRKAID 1112
Query: 1150 PEESSSTSNTVISAEQAVTPARENGRTRSRRKVVATPSTTPXXXXXXXXXXXAKPVKQDA 1209
+E + + + T A +N R K K D+
Sbjct: 1113 DQERAKEMEDLYLPPRRKTAANQNEGKRGAGK-----------------GGKGKQQADDS 1155
Query: 1210 GPXXXXXXXXXXXXXDDAPTKRKEEPPLKDKVEALLALLRELTDPTDEHSRTFI--FERL 1267
G D P KR P +K+K+ T TD R FI +++
Sbjct: 1156 GGDSDYELGSDGSGDDGRPRKR-GRPTMKEKI----------TGFTDAELRRFIRSYKKF 1204
Query: 1268 PSRKEYPDYY----KVIEKPVA-LETITKKLNKKQYQSINEVKSD 1307
P+ + ++ EKP+A L+ + + L+ + Q ++E K +
Sbjct: 1205 PAPLHRMEAIACDAELQEKPLAELKRLGEMLHDRCVQFLHEHKEE 1249
>SPAC3G6.01 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1388
Score = 402 bits (1034), Expect = e-111
Identities = 228/553 (41%), Positives = 329/553 (59%), Gaps = 40/553 (7%)
Query: 501 VDKQPSILVGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKN 560
+++QPS + GG L+++QL G+ WM L++ + NGILADEMGLGKT+Q+++ +SYL
Sbjct: 363 LEQQPSYITGGELRDFQLTGVNWMAYLWHKNENGILADEMGLGKTVQTVAFLSYLAHSLR 422
Query: 561 ERQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKALQH-------TIKMGNFD 613
+ PFLV+VPLST+ W WA + I Y GN R+ ++ T K+ F+
Sbjct: 423 QHGPFLVVVPLSTVPAWQETLALWASDMNCISYLGNTTSRQVIRDYEFYVDGTQKI-KFN 481
Query: 614 VVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPL 673
++LTTYEY++KDR +L+ W +M IDE HR+KN++S L Y +K NRL++TGTPL
Sbjct: 482 LLLTTYEYVLKDRSVLSNIKWQYMAIDEAHRLKNSESSL-YEALSQFKNSNRLLITGTPL 540
Query: 674 QNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVL 733
QNN+ EL AL++F++P F + + IR L + L
Sbjct: 541 QNNIRELAALVDFLMPGKFEIREEIN---------------LEAPDEEQEAYIRSLQEHL 585
Query: 734 RPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIK 793
+P++LRRLKK+VEK LP K E++++ +LS LQ Y+ +L N + T+ +
Sbjct: 586 QPYILRRLKKDVEKSLPSKSERILRVELSDLQMYWYKNILTRNYRVL---TQSISSGSQI 642
Query: 794 GLNNKVMQLRKICNHPFVFDEVENV----INPTRENSSILYRV---SGKFELLDRVLPKF 846
L N V++L+K NHP++FD VE IN +L + SGK LLD++L +
Sbjct: 643 SLLNIVVELKKASNHPYLFDGVEESWMQKINSQGRRDEVLKGLIMNSGKMVLLDKLLSRL 702
Query: 847 KASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCF 906
+ GHRVL+F QM +++DI+ D+L +R + RLDG A R + FNAP+S F F
Sbjct: 703 RRDGHRVLIFSQMVRMLDILGDYLSLRGYPHQRLDGTVPAAVRRTSIDHFNAPNSPDFVF 762
Query: 907 LLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEE 966
LLSTRAGGLG+NL TADTVIIFD+DWNP DLQA RAHRIGQKN V + RL++ D++EE
Sbjct: 763 LLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLLSKDTIEE 822
Query: 967 VILERAMQKLDIDGKVIQAGKFD----NKSTAXXXXXXXXXXXXGDTN--KDDEYSGELD 1020
+LERA +K+ ++ +I G D +K+ G +N K + +L+
Sbjct: 823 DVLERARRKMILEYAIISLGVTDKQKNSKNDKFSAEELSAILKFGASNMFKAENNQKKLE 882
Query: 1021 DEELNEILARTED 1033
D L+EIL ED
Sbjct: 883 DMNLDEILEHAED 895
>SPAC1783.05 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1373
Score = 399 bits (1026), Expect = e-110
Identities = 228/551 (41%), Positives = 331/551 (59%), Gaps = 37/551 (6%)
Query: 501 VDKQPSILVGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKN 560
++KQPS + GG ++++QL G+ WM L++ + NGILADEMGLGKT+Q++ +SYL
Sbjct: 378 LEKQPSYIKGGEIRDFQLTGINWMAYLWHRNENGILADEMGLGKTVQTVCFLSYLVHSLK 437
Query: 561 ERQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKALQH-------TIKMGNFD 613
+ PFL++VPLST+ W W P L +I Y GN R ++ + F+
Sbjct: 438 QHGPFLIVVPLSTVPAWQETLANWTPDLNSICYTGNTESRANIREYEFYLSTNSRKLKFN 497
Query: 614 VVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPL 673
++LTTYEYI+KD+ L W ++ IDE HR+KN++S L TL+ + +T NRL++TGTPL
Sbjct: 498 ILLTTYEYILKDKQELNNIRWQYLAIDEAHRLKNSESSLYETLSQF-RTANRLLITGTPL 556
Query: 674 QNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVL 733
QNNL EL +L+NF++P F + F+ P A IR L + L
Sbjct: 557 QNNLKELASLVNFLMPGKFYIRDELN--FDQPNAEQERD-------------IRDLQERL 601
Query: 734 RPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIK 793
+PF+LRRLKK+VEK LP K E++++ +LS +Q + Y+ +L N + T+G G
Sbjct: 602 QPFILRRLKKDVEKSLPSKSERILRVELSDMQTEWYKNILTKNYRALTGHTDGR---GQL 658
Query: 794 GLNNKVMQLRKICNHPFVFDEVENVI----NPTRENSSI-LYRVSGKFELLDRVLPKFKA 848
L N V++L+K+ NHP++F TRE++ + SGK LLD++L + K
Sbjct: 659 SLLNIVVELKKVSNHPYLFPGAAEKWMMGRKMTREDTLRGIIMNSGKMVLLDKLLQRLKH 718
Query: 849 SGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLL 908
GHRVL+F QM ++++I+ +++ +R Y RLDG A R + FNAPDS F FLL
Sbjct: 719 DGHRVLIFSQMVRMLNILGEYMSLRGYNYQRLDGTIPASVRRVSIDHFNAPDSPDFVFLL 778
Query: 909 STRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVI 968
STRAGGLG+NL TADTVIIFD+DWNP DLQA RAHRIGQKN V + R ++ D+VEE I
Sbjct: 779 STRAGGLGINLNTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVNVYRFLSKDTVEEDI 838
Query: 969 LERAMQKLDIDGKVIQAG----KFDNKSTAXXXXXXXXXXXXGDTN--KDDEYSGELDDE 1022
LERA +K+ ++ +I G ++K+ G +N K E +L++
Sbjct: 839 LERARRKMILEYAIISLGVTEKSKNSKNDKYDAQELSAILKFGASNMFKATENQKKLENM 898
Query: 1023 ELNEILARTED 1033
L++IL+ ED
Sbjct: 899 NLDDILSHAED 909
>ECU10g1320 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 823
Score = 395 bits (1014), Expect = e-109
Identities = 217/523 (41%), Positives = 320/523 (60%), Gaps = 30/523 (5%)
Query: 513 LKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLS 572
L++YQ++GL W+++++ N +N ILADEMGLGKT+Q+I+ + Y+ +K ER+ L+I+P S
Sbjct: 53 LRDYQIEGLNWLINMHENSINCILADEMGLGKTLQTIAFLGYIRYVKKERKRHLIILPKS 112
Query: 573 TITNWTIEFEKWAPSLRTIVYKGNPNQRKALQHTIKMGNFDVVLTTYEYIIKDRPLLAKH 632
T+ NW EF K+ P+ + V+ + + + I +D LTTYE I R +L
Sbjct: 113 TLANWRREFRKFMPNYKVRVFYSSRKEMRREAEEIMSSRWDACLTTYEMCINARSILNTV 172
Query: 633 DWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIF 692
W++++IDE HR+KN S LS + + +RL++TGTPLQNN+ ELWALLNF++P+IF
Sbjct: 173 KWSYIVIDEAHRIKNEHSLLS-KIVRIFSCDHRLLITGTPLQNNVHELWALLNFIVPEIF 231
Query: 693 NSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDK 752
N ++ F+ + G IRR+ VL+ F LRR K +VE LP K
Sbjct: 232 NDAEKFESYVMNIDEGDGEA-------------IRRIRSVLQLFFLRREKIDVEMSLPPK 278
Query: 753 VEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKG-LNNKVMQLRKICNHPFV 811
+ KLS +Q++ Y +LK + +G+ + KG L N VMQLRK CNHP++
Sbjct: 279 KIVNLYSKLSPMQREWYRMLLKRDLSPLGSTRDP------KGMLMNVVMQLRKCCNHPYL 332
Query: 812 FDEVENVINPTRENSSILYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLR 871
F + E P + I+ SGK +LD++L KA G RVL+F QM+ ++DI+ED+
Sbjct: 333 FPDAEP--KPYTNDKHIIEN-SGKMIVLDKLLASLKAKGSRVLIFSQMSMMLDILEDYAM 389
Query: 872 MRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTD 931
R+ +Y R+DG T DRT + FNA SE F FLL+TRAGGLG+NL TADTVI+FD+D
Sbjct: 390 FREYEYCRIDGSTSYRDRTEAIDGFNAEGSEKFLFLLTTRAGGLGINLSTADTVILFDSD 449
Query: 932 WNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNK 991
WNP DLQAQDRAHRIGQK +V + RLI+ ++VEE I+ R++QKL +D ++Q G++
Sbjct: 450 WNPQMDLQAQDRAHRIGQKKQVVVFRLISENTVEERIVYRSLQKLKLDDILLQ-GRYHRS 508
Query: 992 STAXXXXXXXXXXXXGDTNKDDEYSGELDDEELNEILARTEDE 1034
S+ + +D E DE + +++ R E++
Sbjct: 509 SSVSQSELIDILANGMEITED-----EGKDESIEDVIRRGEEK 546
>CE11572 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1465
Score = 393 bits (1010), Expect = e-109
Identities = 215/479 (44%), Positives = 305/479 (62%), Gaps = 29/479 (6%)
Query: 513 LKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLS 572
L++YQL+GL WMV + + ILADEMGLGKTIQSISL++ L+ + P+LV+VPLS
Sbjct: 405 LRDYQLEGLNWMVYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLS 464
Query: 573 TITNWTIEFEKWAPSLRTIVYKGNPNQRKALQH-------TIKMGNFDVVLTTYEYIIKD 625
T+ W EF +WAP + +VY G+ R ++ T KM + +LTTYE ++KD
Sbjct: 465 TMAAWQKEFAQWAPEMNLVVYMGDVVSRDMIRQYEWFVGGTKKM-KINAILTTYEILLKD 523
Query: 626 RPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLN 685
+ L+ DWA +++DE HR+KN +S L +LT + + ++L++TGTPLQN+L ELWALL+
Sbjct: 524 KAFLSSIDWAALLVDEAHRLKNDESLLYKSLTQF-RFNHKLLITGTPLQNSLKELWALLH 582
Query: 686 FVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEV 745
F++P+ F+ + F+ N I LHK L PFLLRR+KK+V
Sbjct: 583 FIMPEKFDCWEEFETAHNE----------------SNHKGISALHKKLEPFLLRRVKKDV 626
Query: 746 EKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKVMQLRKI 805
EK LP K E++++ +++ Q+Q Y+ +L N + G +G+ I G N VM+L+K
Sbjct: 627 EKSLPPKTEQILRVDMTAHQKQFYKWILTKNYRELSKGVKGS----INGFVNLVMELKKC 682
Query: 806 CNHPFVFDEVENVINPTRENSSILYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDI 865
CNH + + +++ + + L + SGK LLD++L + K GHRVL+F QM ++DI
Sbjct: 683 CNHASLTRQYDHIYDDAQGRLQQLLKSSGKLILLDKLLCRLKDKGHRVLIFSQMVMMLDI 742
Query: 866 MEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTV 925
++++L++R RLDG +A+ R L +NAP S F FLLSTRAGGLG+NL TADTV
Sbjct: 743 LQEYLQLRRFPSQRLDGSMRADLRKQALDHYNAPGSTDFAFLLSTRAGGLGINLATADTV 802
Query: 926 IIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQ 984
IIFD+DWNP DLQA RAHRIGQ V I RL+T SVEE I+ERA +KL +D VIQ
Sbjct: 803 IIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVIQ 861
>Hs4557453 [R] KOG0383 Predicted helicase
Length = 1912
Score = 389 bits (1000), Expect = e-107
Identities = 256/717 (35%), Positives = 381/717 (52%), Gaps = 80/717 (11%)
Query: 467 NEVRIKRGEEIPP---ITDEEREKIDYYEVSHRIKETV--DKQPSIL--VGGTLKEYQLK 519
N + RGEE P + + K++ + + TV ++QP L GGTL YQ++
Sbjct: 673 NHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDATGGTLHPYQME 732
Query: 520 GLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLSTITNWTI 579
GL W+ + + ILADEMGLGKT+Q+ + LY+ + + PFLV PLSTI NW
Sbjct: 733 GLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWER 792
Query: 580 EFEKWAPSLRTIVYKGNPNQRKALQ--------HTIKMGN------------FDVVLTTY 619
EFE WAP + + Y G+ + R ++ + I+ G F V+LT+Y
Sbjct: 793 EFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSY 852
Query: 620 EYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPE 679
E I D +L DWA +I+DE HR+KN QSK + + + Y +++L+LTGTPLQNNL E
Sbjct: 853 ELITIDMAILGSIDWACLIVDEAHRLKNNQSKF-FRVLNGYSLQHKLLLTGTPLQNNLEE 911
Query: 680 LWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLR 739
L+ LLNF+ P+ F++ + F E F I++LH +L P +LR
Sbjct: 912 LFHLLNFLTPERFHNLEGFLEEF---------------ADIAKEDQIKKLHDMLGPHMLR 956
Query: 740 RLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKV 799
RLK +V K++P K E +V+ +LS +Q++ Y+ +L N + A G + L N V
Sbjct: 957 RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVS----LLNVV 1012
Query: 800 MQLRKICNHPFVFD----EVENVINPTRENSSILYRVSGKFELLDRVLPKFKASGHRVLM 855
M L+K CNHP++F E + N + S+++ R SGK LL ++L K GHRVL+
Sbjct: 1013 MDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALI-RASGKLLLLQKMLKNLKEGGHRVLI 1071
Query: 856 FFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGL 915
F QMT+++D++EDFL KY R+DGG R + FNAP ++ FCFLLSTRAGGL
Sbjct: 1072 FSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGL 1131
Query: 916 GLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQK 975
G+NL TADTVII+D+DWNPH D+QA RAHRIGQ +V I R +T SVEE I + A +K
Sbjct: 1132 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKK 1191
Query: 976 LDIDGKVIQAGKFDNKST------------AXXXXXXXXXXXXGDTNKDDEYSGEL--DD 1021
+ + V++ G + G NK+ E S + DD
Sbjct: 1192 MMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGDNKEGEDSSVIHYDD 1251
Query: 1022 EELNEILARTEDE------KVLFKKIDEERVANEKREAIDLGLRKPLPRLITKEEL---P 1072
+ + +L R +DE + + + + +VA ++G + + R I K+E P
Sbjct: 1252 KAIERLLDRNQDETEDTELQGMNEYLSSFKVAQYVVREEEMGEEEEVEREIIKQEESVDP 1311
Query: 1073 SVFTEDITDHLNVEPAAIGR-----IRERKRVYYDDGLTEEQWLQAVDNDEDLDETI 1124
+ + + H + + R R RK+V Y+DG E++ Q +D D ++
Sbjct: 1312 DYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQSDNQSDYSV 1368
>At5g66750 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 764
Score = 389 bits (998), Expect = e-107
Identities = 231/592 (39%), Positives = 335/592 (56%), Gaps = 41/592 (6%)
Query: 465 QQNEVRIKRGEEIPPITDEEREKIDYYEVSHRIKETVDKQPS----ILVGGTLKEYQLKG 520
Q N + KR + + +E + +ETV K + +L GG LK YQLKG
Sbjct: 152 QYNNTKAKRA--VAAMISRSKEDGETINSDLTEEETVIKLQNELCPLLTGGQLKSYQLKG 209
Query: 521 LEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLSTITNWTIE 580
++W++SL+ N LNGILAD+MGLGKTIQ+I +S+L + P+LVI PLST++NW E
Sbjct: 210 VKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHL-KGNGLDGPYLVIAPLSTLSNWFNE 268
Query: 581 FEKWAPSLRTIVYKGNPNQRKALQ--HTIKM--GNFDVVLTTYEYIIKDRPLLAKH-DWA 635
++ PS+ I+Y G+ NQR L+ H K F +V+T+YE + D + +H W
Sbjct: 269 IARFTPSINAIIYHGDKNQRDELRRKHMPKTVGPKFPIVITSYEVAMNDAKRILRHYPWK 328
Query: 636 HMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSS 695
+++IDEGHR+KN + KL L H K N+L+LTGTPLQNNL ELW+LLNF+LP IF S
Sbjct: 329 YVVIDEGHRLKNHKCKLLRELKHL-KMDNKLLLTGTPLQNNLSELWSLLNFILPDIFTSH 387
Query: 696 KTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEK 755
F+ WF+ N V+ +LH +LRPF+LRR+K +VE LP K E
Sbjct: 388 DEFESWFDFSEKNKNEATKEEEEKRRAQ-VVSKLHGILRPFILRRMKCDVELSLPRKKEI 446
Query: 756 VVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKG-LNNKVMQLRKICNHP----- 809
++ ++ Q++ E ++ +N G G KG LNN V+QLRK CNHP
Sbjct: 447 IMYATMTDHQKKFQEHLV-NNTLEAHLGENAIRGQGWKGKLNNLVIQLRKNCNHPDLLQG 505
Query: 810 -----FVFDEVENVINPTRENSSILYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMD 864
+++ VE ++ GKF LL+R+L + A+ H+VL+F Q T+++D
Sbjct: 506 QIDGSYLYPPVEEIVGQC-----------GKFRLLERLLVRLFANNHKVLIFSQWTKLLD 554
Query: 865 IMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADT 924
IM+ + + + R+DG K ++R +K F+ S FLLSTRAGGLG+NL ADT
Sbjct: 555 IMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCSIFLLSTRAGGLGINLTAADT 614
Query: 925 VIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQ 984
I++D+DWNP DLQA DR HRIGQ V + RL T S+E +L+RA KL ++ VI
Sbjct: 615 CILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIETRVLKRAYSKLKLEHVVIG 674
Query: 985 AGKFDNK----STAXXXXXXXXXXXXGDTNKDDEYSGELDDEELNEILARTE 1032
G+F + ST +T +D ++ D +L+ +L R++
Sbjct: 675 QGQFHQERAKSSTPLEEEDILALLKEDETAEDKLIQTDISDADLDRLLDRSD 726
>Hs4557451 [R] KOG0383 Predicted helicase
Length = 1944
Score = 378 bits (971), Expect = e-104
Identities = 249/678 (36%), Positives = 360/678 (52%), Gaps = 81/678 (11%)
Query: 502 DKQPSILV--GGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIK 559
+ QP + GGTL YQL+GL W+ + + ILADEMGLGKTIQ+I + LY+
Sbjct: 723 ETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEG 782
Query: 560 NERQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKALQ--------HTIKMGN 611
+ + PFLV PLSTI NW EF+ WAP + Y G+ + R ++ + IK G
Sbjct: 783 HTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGK 842
Query: 612 ------------FDVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHY 659
F V+LT+YE I D+ L WA +++DE HR+KN QSK + + +
Sbjct: 843 KAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKF-FRVLNG 901
Query: 660 YKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXX 719
YK ++L+LTGTPLQNNL EL+ LLNF+ P+ FN+ + F E F
Sbjct: 902 YKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF---------------AD 946
Query: 720 XXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFF 779
I++LH +L P +LRRLK +V K++P K E +V+ +LS +Q++ Y+ +L N F
Sbjct: 947 ISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRN--F 1004
Query: 780 IGAGTEGATKAGIKGLNNKVMQLRKICNHPFVFDEVENVINPTRENSSI----LYRVSGK 835
+ G L N +M L+K CNHP++F V + +P + + L + SGK
Sbjct: 1005 EALNSRGGGNQ--VSLLNIMMDLKKCCNHPYLFP-VAAMESPKLPSGAYEGGALIKSSGK 1061
Query: 836 FELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKL 895
LL ++L K K GHRVL+F QMT+++D++EDFL KY R+DGG R +
Sbjct: 1062 LMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDR 1121
Query: 896 FNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRI 955
FNAP ++ FCFLLSTRAGGLG+NL TADTVIIFD+DWNPH D+QA RAHRIGQ N+V I
Sbjct: 1122 FNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMI 1181
Query: 956 LRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKSTAXXXXXXXXXXXXGDTNKDDEY 1015
R +T SVEE I + A +K+ + V++ G + + DE
Sbjct: 1182 YRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKDEN 1241
Query: 1016 SGELDDEELNEILARTEDEKVLFKKIDEERVANEKREAIDLG---LRKPLPRLITKEE-- 1070
GE +E+ + I D + + + +D + A E + ++ + + + +EE
Sbjct: 1242 EGENKEEDSSVI---HYDNEAIARLLDRNQDATEDTDVQNMNEYLSSFKVAQYVVREEDK 1298
Query: 1071 LPSVFTEDITDHLNVEPAAIGRI--------------------RERKRVYYDDGLTEEQW 1110
+ + E I NV+P ++ R RK+V Y+D E+Q
Sbjct: 1299 IEEIEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRVRKQVNYNDAAQEDQD 1358
Query: 1111 LQ------AVDNDEDLDE 1122
Q + + DED DE
Sbjct: 1359 NQSEYSVGSEEEDEDFDE 1376
>Hs20533808 [R] KOG0383 Predicted helicase
Length = 1954
Score = 376 bits (965), Expect = e-103
Identities = 223/541 (41%), Positives = 318/541 (58%), Gaps = 49/541 (9%)
Query: 471 IKRGEEIPPITDEEREKIDYYEVSHRIKETVDKQPSIL--VGGTLKEYQLKGLEWMVSLY 528
+K+G+++ D++ + D V +K DKQP + GGTL YQL+GL W+ +
Sbjct: 660 LKKGKKLRD--DKQEKPPDTPIVDPTVK--FDKQPWYIDSTGGTLHPYQLEGLNWLRFSW 715
Query: 529 NNHLNGILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLSTITNWTIEFEKWAPSL 588
+ ILADEMGLGKT+Q+I + LY+ + + P+LV PLSTI NW EFE WAP
Sbjct: 716 AQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDF 775
Query: 589 RTIVYKGNPNQRKALQ--------HTIKMGN------------FDVVLTTYEYIIKDRPL 628
+ Y G+ R ++ + I+ G F V+LT+YE I D+ +
Sbjct: 776 YVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAI 835
Query: 629 LAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVL 688
L +WA +++DE HR+KN QSK + + + YK +L+LTGTPLQNNL EL+ LLNF+
Sbjct: 836 LGSIEWACLVVDEAHRLKNNQSKF-FRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLT 894
Query: 689 PKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKD 748
P+ FN+ + F E F I++LH +L P +LRRLK +V K+
Sbjct: 895 PERFNNLEGFLEEF---------------ADISKEDQIKKLHDLLGPHMLRRLKADVFKN 939
Query: 749 LPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKVMQLRKICNH 808
+P K E +V+ +LS +Q++ Y+ +L N F ++G L N +M L+K CNH
Sbjct: 940 MPAKTELIVRVELSQMQKKYYKFILTRN--FEALNSKGGGNQ--VSLLNIMMDLKKCCNH 995
Query: 809 PFVFD--EVENVINPTRE-NSSILYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDI 865
P++F VE + P + S L + SGK LL ++L K + GHRVL+F QMT+++D+
Sbjct: 996 PYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDL 1055
Query: 866 MEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTV 925
+EDFL KY R+DGG R + FNAP ++ FCFLLSTRAGGLG+NL TADTV
Sbjct: 1056 LEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTV 1115
Query: 926 IIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQA 985
II+D+DWNPH D+QA RAHRIGQ +V I R +T SVEE I + A +K+ + V++
Sbjct: 1116 IIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRP 1175
Query: 986 G 986
G
Sbjct: 1176 G 1176
>At2g25170 [R] KOG0383 Predicted helicase
Length = 1359
Score = 371 bits (952), Expect = e-102
Identities = 247/694 (35%), Positives = 367/694 (52%), Gaps = 74/694 (10%)
Query: 392 YQMGRSIGNLHGHLEKDEQR-------RMERTAKQRLAALKSNDEEAYLKLLDQTKDTRI 444
+++ + N H +E R E T R+ A + D E L+ L + K+
Sbjct: 148 HRLKTRVNNFHRQMESFNNSEDDFVAIRPEWTTVDRILACREEDGE--LEYLVKYKELSY 205
Query: 445 THLLKQTNSFLDSLAQAV-RVQQNEVRIKRGEEIPPITDEEREKIDYYEVSHRIKETVDK 503
++ S + + + R + R +R +++ D +R D+ + H + D
Sbjct: 206 DECYWESESDISTFQNEIQRFKDVNSRTRRSKDV----DHKRNPRDFQQFDHTPEFLKDV 261
Query: 504 QPSIL--VGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNE 561
+ + G L YQL+GL ++ ++ + ILADEMGLGKTIQSI+L++ L+E
Sbjct: 262 MIYLFPAIEGLLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIALLASLFE--EN 319
Query: 562 RQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKAL----------QHTIKMGN 611
P LVI PLST+ NW EF WAP + ++Y G R + Q IK
Sbjct: 320 LIPHLVIAPLSTLRNWEREFATWAPQMNVVMYFGTAQARAVIREHEFYLSKDQKKIKKKK 379
Query: 612 --------------FDVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLT 657
FDV+LT+YE I D +L W MI+DEGHR+KN SKL +LT
Sbjct: 380 SGQISSESKQKRIKFDVLLTSYEMINLDSAVLKPIKWECMIVDEGHRLKNKDSKLFSSLT 439
Query: 658 HYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXX 717
Y + +R++LTGTPLQNNL EL+ L++F+ F S + F E F
Sbjct: 440 QY-SSNHRILLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKD------------- 485
Query: 718 XXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNA 777
I RLHK+L P LLRR+KK+V KD+P K E +++ LSSLQ++ Y+ + N
Sbjct: 486 --INQEEQISRLHKMLAPHLLRRVKKDVMKDMPPKKELILRVDLSSLQKEYYKAIFTRNY 543
Query: 778 FFIGAGTEGATKAGIK-GLNNKVMQLRKICNHPFVFDEVENVINPTRENSSILYRVSGKF 836
+ K G + LNN +M+LRK+C HP++ + VE VI+ E L GK
Sbjct: 544 QVL------TKKGGAQISLNNIMMELRKVCCHPYMLEGVEPVIHDANEAFKQLLESCGKL 597
Query: 837 ELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLF 896
+LLD+++ K K GHRVL++ Q ++D++ED+ + +Y R+DG +R + F
Sbjct: 598 QLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCTHKKWQYERIDGKVGGAERQIRIDRF 657
Query: 897 NAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRIL 956
NA +S FCFLLSTRAGGLG+NL TADTVII+D+DWNPH DLQA RAHR+GQ N+V I
Sbjct: 658 NAKNSNKFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIY 717
Query: 957 RLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKSTAXXXXXXXXXXXXGDTNKDDE-- 1014
RLI ++EE +++ +K+ ++ V+ K N + ++DDE
Sbjct: 718 RLINRGTIEERMMQLTKKKMVLEHLVVGKLKTQNINQEELDDIIRYGSKELFASEDDEAG 777
Query: 1015 YSGEL--DDEELNEILAR--TEDEKVLFKKIDEE 1044
SG++ DD ++++L R E E+V +D+E
Sbjct: 778 KSGKIHYDDAAIDKLLDRDLVEAEEV---SVDDE 808
>CE03657 [R] KOG0383 Predicted helicase
Length = 1787
Score = 369 bits (946), Expect = e-101
Identities = 233/632 (36%), Positives = 339/632 (52%), Gaps = 71/632 (11%)
Query: 464 VQQNEVRIKRGEEIPPITDE------EREKIDYYEVSHRIKETVDKQPSIL--VGGTLKE 515
VQ+ + + + + P DE +REKID I + + QP + GG L
Sbjct: 566 VQKMIAKQREAKGLGPKEDEVTSRRKKREKID-------ILKKYEVQPDFISETGGNLHP 618
Query: 516 YQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLSTIT 575
YQL+G+ W+ ++N + ILADEMGLGKT+QS++ + L + + + PFL+ PLSTI
Sbjct: 619 YQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYTLMKEGHTKGPFLIAAPLSTII 678
Query: 576 NWTIEFEKWAPSLRTIVYKGNPNQRKALQH--------------------TIKMGNFDVV 615
NW E E W P + Y G+ R ++ T++ F V+
Sbjct: 679 NWEREAELWCPDFYVVTYVGDRESRMVIREHEFSFVDGAVRGGPKVSKIKTLENLKFHVL 738
Query: 616 LTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQN 675
LT+YE I D+ +L+ DWA +++DE HR+KN QS L Y + R++LTGTPLQN
Sbjct: 739 LTSYECINMDKAILSSIDWAALVVDEAHRLKNNQSTFFKNLREY-NIQYRVLLTGTPLQN 797
Query: 676 NLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRP 735
NL EL+ LLNF+ P FN ++F F+ I +LH +L P
Sbjct: 798 NLEELFHLLNFLAPDRFNQLESFTAEFSE---------------ISKEDQIEKLHNLLGP 842
Query: 736 FLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGL 795
+LRRLK +V +P K E +V+ +LS++Q++ Y+ +L N + G + L
Sbjct: 843 HMLRRLKADVLTGMPSKQELIVRVELSAMQKKYYKNILTRNFDALNVKNGGTQMS----L 898
Query: 796 NNKVMQLRKICNHPFVFD----EVENVINPTRENSSILYRVSGKFELLDRVLPKFKASGH 851
N +M+L+K CNHP++F E + N E S+++ + +GKF LL ++L K K GH
Sbjct: 899 INIIMELKKCCNHPYLFMKACLEAPKLKNGMYEGSALI-KNAGKFVLLQKMLRKLKDGGH 957
Query: 852 RVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTR 911
RVL+F QMT ++DI+EDF + KY R+DG + R + +NAP ++ F FLLSTR
Sbjct: 958 RVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQDAIDRYNAPGAKQFVFLLSTR 1017
Query: 912 AGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILER 971
AGGLG+NL TADTVII+D+DWNPH D+QA RAHR+GQK++V I R +T SVEE I
Sbjct: 1018 AGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKGSVEERITSV 1077
Query: 972 AMQKLDIDGKVIQA--GKFDNKSTAXXXXXXXXXXXXGDTNKDDEYSGELDDEELNEILA 1029
A +K+ + V++A G D KS + + K++E E D E
Sbjct: 1078 AKKKMLLTHLVVRAGLGAKDGKSMSKTELDDVLRWGTEELFKEEEAPVEGADGEGTSSKK 1137
Query: 1030 RTEDEKV---------LFKKIDEERVANEKRE 1052
E E V L + +EE EK+E
Sbjct: 1138 PNEQEIVWDDAAVDFLLDRNKEEEGQDGEKKE 1169
>CE17716 [R] KOG0383 Predicted helicase
Length = 1829
Score = 366 bits (939), Expect = e-100
Identities = 217/553 (39%), Positives = 316/553 (56%), Gaps = 58/553 (10%)
Query: 464 VQQNEVRIKRGEEIPPITDEE----REKIDYYEVSHRIKETVDKQPSILV--GGTLKEYQ 517
VQ+ + + + +PP DE+ REKID I++ + QP + GG L YQ
Sbjct: 554 VQKMIAKHREAKGLPPKEDEKKKKKREKID-------IRKKYEVQPDYVTETGGKLHPYQ 606
Query: 518 LKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLSTITNW 577
L+GL W+ ++N + ILADEMGLGKT+QS++ + L + + + PFL+ PLSTI NW
Sbjct: 607 LEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAAPLSTIINW 666
Query: 578 TIEFEKWAPSLRTIVYKGNPNQRKALQH--------------------TIKMGNFDVVLT 617
E E+W P + Y G + R L+ T + F V+LT
Sbjct: 667 EREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTTENMKFHVLLT 726
Query: 618 TYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNL 677
+YE I D+ +L+ +W +++DE HR+KN QS L + + Y R++LTGTPLQNNL
Sbjct: 727 SYETINMDKTILSSIEWGALVVDEAHRLKNNQS-LFFKNLNEYTIHYRVLLTGTPLQNNL 785
Query: 678 PELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFL 737
EL+ LLNF+ + FN + F FN I +LH +L P +
Sbjct: 786 EELFHLLNFLSKERFNQLEAFTAEFNE---------------ISKEDQIEKLHNLLGPHM 830
Query: 738 LRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGLNN 797
LRRLK +V +P K E +V+ +LS++Q++ Y+ +L N + G + L N
Sbjct: 831 LRRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMS----LMN 886
Query: 798 KVMQLRKICNHPFVFDEVENVINPTRENS----SILYRVSGKFELLDRVLPKFKASGHRV 853
+M+L+K CNHP++F + E + P +N + L + SGKF LL ++L K K GHRV
Sbjct: 887 VLMELKKCCNHPYLFVKAE-LEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRV 945
Query: 854 LMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAG 913
L+F QMT+++DIMED +Y R+DG + R + +NAP ++ F FLLSTRAG
Sbjct: 946 LIFSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAG 1005
Query: 914 GLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAM 973
GLG+NL TADTVII+D+DWNPH D+QA RAHR+GQK++V I R +T SVEE I A
Sbjct: 1006 GLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAK 1065
Query: 974 QKLDIDGKVIQAG 986
+K+ ++ V++AG
Sbjct: 1066 KKMLLNHLVVRAG 1078
>YFR038w [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 778
Score = 365 bits (938), Expect = e-100
Identities = 232/666 (34%), Positives = 357/666 (52%), Gaps = 94/666 (14%)
Query: 413 MERTAKQRLAALKSNDEEAYLKLLD----QTKDTRITHLLKQTNSFLDSLAQAVRVQQNE 468
+++ AK + KS D+E L +D K ++ ++Q+ + +A + + NE
Sbjct: 100 VDKLAKDTKSEQKSLDDE--LSEMDTKTVSLKLKKLNEFVRQSQVYSSIIADTLLHRSNE 157
Query: 469 VRIKRGEEIPPITDEEREK----------IDYYEVSHRIKETVD----------KQPSIL 508
V ++ DEE D+++ + ++T KQP +L
Sbjct: 158 VANANTKDNSNSDDEEHSSKKRKTKKKSITDFFKKQKKNEDTTTQNGAPDDAAIKQPRLL 217
Query: 509 VGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNERQPFLVI 568
LK YQL+GL W+++LY N LNGILADEMGLGKT+QSI+L++++YE+ + + PFLV
Sbjct: 218 KNCILKPYQLEGLNWLITLYENGLNGILADEMGLGKTVQSIALLAFIYEM-DTKGPFLVT 276
Query: 569 VPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRK---ALQHTIKM-GNFDVVLTTYEYIIK 624
PLST+ NW EF K+AP L + Y G ++ L++ K G +V+T+YE I++
Sbjct: 277 APLSTLDNWMNEFAKFAPDLPVLKYYGTNGYKERSAKLKNFFKQHGGTGIVITSYEIILR 336
Query: 625 DRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALL 684
D L+ +W +I+DEGHR+KN +L L T NRL+LTGTPLQNNL ELW+LL
Sbjct: 337 DTDLIMSQNWKFLIVDEGHRLKNINCRLIKELKK-INTSNRLLLTGTPLQNNLAELWSLL 395
Query: 685 NFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXX-----XXXXXXXVIRRLHKVLRPFLLR 739
NF++P IF + F++WF+ N G +I LH +L+PFLLR
Sbjct: 396 NFIMPDIFADFEIFNKWFDFDSLNLGSGSNSEALNKLINDELQKNLISNLHTILKPFLLR 455
Query: 740 RLKKEVEKD-LPDKVEKVVKCKLSSLQQQLY-------------EQMLKH----NAFFIG 781
RLKK V + LP K E ++ C ++S Q++ Y ++++K N +IG
Sbjct: 456 RLKKVVLANILPPKREYIINCPMTSAQEKFYKAGLNGKLKKTMFKELIKDFFTLNDEYIG 515
Query: 782 ---------------AGTEGAT----------------KAGIK-GLNNKVMQ-----LRK 804
+G E + K ++ ++NK +Q LR+
Sbjct: 516 HVSNRSIRDFINYKLSGNETSNTDNKINPTLLQMDKLYKKNLQMEISNKKLQNMMMQLRQ 575
Query: 805 ICNHPFVFDEVENVINPTRENSSILYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMD 864
I + F+F ++P L + SGK ++L +++P + GH+VL++ Q ++D
Sbjct: 576 IIDSTFLF--YFPYLHPEDLTLETLLKTSGKLQILQKLIPPLISEGHKVLIYSQFVNMLD 633
Query: 865 IMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADT 924
++ED+ + R+DG E R L+ FN+ ++ FLLSTRA GLG+NL ADT
Sbjct: 634 LIEDWCDLNSFATFRIDGSVNNETRKDQLEKFNSSKDKHNIFLLSTRAAGLGINLVGADT 693
Query: 925 VIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQ 984
V++FD+DWNP DLQA DR HRIGQ++ V + RL +++E VIL RA K +++ VIQ
Sbjct: 694 VVLFDSDWNPQVDLQAMDRCHRIGQESPVIVYRLCCDNTIEHVILTRAANKRNLERMVIQ 753
Query: 985 AGKFDN 990
GKF+N
Sbjct: 754 MGKFNN 759
>Hs21362042 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 2713
Score = 364 bits (935), Expect = e-100
Identities = 236/680 (34%), Positives = 360/680 (52%), Gaps = 68/680 (10%)
Query: 477 IPPITDEEREKIDYYEVSHRIKETVDKQPSILVGGTLKEYQLKGLEWMVSLYNNHLNGIL 536
+P I ER D ++ + +E + L+EYQL+G+ W++ + N N IL
Sbjct: 430 LPEIKHVERPASDSWQKLEKSREYKNSNQ-------LREYQLEGMNWLLFNWYNRKNCIL 482
Query: 537 ADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGN 596
ADEMGLGKTIQSI+ +S ++ ++ PFL+I PLSTITNW EF W + IVY G+
Sbjct: 483 ADEMGLGKTIQSITFLSEIF-LRGIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 540
Query: 597 PNQRKALQ-----HTIKMGN-------FDVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHR 644
R+ +Q + GN F VV+TT+E I+ D P L K W+ +IIDE HR
Sbjct: 541 QISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 600
Query: 645 MKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNT 704
+KN KL L +++++LTGTPLQN++ EL++LLNF+ P F S F E F
Sbjct: 601 LKNRNCKLLEGLK-LMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 659
Query: 705 PFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSL 764
+++L +L+P +LRRLK +VEK+L K E +++ +L+++
Sbjct: 660 ---------------LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNI 704
Query: 765 QQQLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKVMQLRKICNHPFVFDEVEN-VINPTR 823
Q++ Y +L+ N F+ T+GA + + L N +M+LRK CNHP++ + E ++ R
Sbjct: 705 QKKYYRAILEKNFSFL---TKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFR 761
Query: 824 ENSS---------ILYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRD 874
+ S + + +GK L+D++LPK A GH+VL+F QM + +DI+ED+L R
Sbjct: 762 KTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR 821
Query: 875 LKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNP 934
Y R+DG + R + F PDS+ F FLL TRAGGLG+NL ADT IIFD+DWNP
Sbjct: 822 YTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNP 881
Query: 935 HQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKSTA 994
DLQAQ R HRIGQ V++ RLIT +S E + ++A KL +D V+Q N+
Sbjct: 882 QNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQD---INRKGG 938
Query: 995 XXXXXXXXXXXXGDTNKDDEYSGELDDEELNEILARTEDEKVLFKKIDEERVANE----- 1049
D + Y +D+E+ + +++L ++ + +E
Sbjct: 939 TNGVQQLSKMEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGST 998
Query: 1050 --KREAIDLGLRKPL----PRLITK-EELPSVFTEDITDHLNVEPAAIGRIRERKRVYYD 1102
K + G R + P K ++ + TE + E I R R RK+ +
Sbjct: 999 FAKASFVASGNRTDISLDDPNFWQKWAKIAKLDTEAKNEK---ESLVIDRPRVRKQTKHY 1055
Query: 1103 DGLTEEQWLQAVDNDEDLDE 1122
+ E++ ++ + D D DE
Sbjct: 1056 NSFEEDELMEFSELDSDSDE 1075
>Hs22047300 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1970
Score = 363 bits (931), Expect = 1e-99
Identities = 226/644 (35%), Positives = 345/644 (53%), Gaps = 60/644 (9%)
Query: 513 LKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLS 572
L+EYQL+G+ W++ + N N ILADEMGLGKTIQSI+ + +Y +K PFLVI PLS
Sbjct: 399 LREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIY-LKGIHGPFLVIAPLS 457
Query: 573 TITNWTIEFEKWAPSLRTIVYKGNPNQRKALQ-----------HTIKMG-NFDVVLTTYE 620
TI NW EF W L +VY G+ R+ +Q IK F ++TT+E
Sbjct: 458 TIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFE 516
Query: 621 YIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPEL 680
I+ D P L W ++IDE HR+KN KL L +++++LTGTPLQN + EL
Sbjct: 517 MILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLK-MMDLEHKVLLTGTPLQNTVEEL 575
Query: 681 WALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRR 740
++LL+F+ P F S TF + F +++L +L+P +LRR
Sbjct: 576 FSLLHFLEPSRFPSETTFMQEFGD---------------LKTEEQVQKLQAILKPMMLRR 620
Query: 741 LKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKVM 800
LK++VEK+L K E +++ +L+++Q++ Y +L+ N F+ ++G +A + L N +M
Sbjct: 621 LKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFL---SKGGGQANVPNLLNTMM 677
Query: 801 QLRKICNHPFV-----------FDEVENVINPTRENSSILYRVSGKFELLDRVLPKFKAS 849
+LRK CNHP++ F E N +P + +++ + +GK L+D++LPK KA
Sbjct: 678 ELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMI-QAAGKLVLIDKLLPKLKAG 736
Query: 850 GHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLS 909
GHRVL+F QM + +DI+ED+L R Y R+DG + R + F+ PDS+ F FLL
Sbjct: 737 GHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLC 796
Query: 910 TRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVIL 969
TRAGGLG+NL ADT IIFD+DWNP DLQAQ R HRIGQ V+I RLIT +S E +
Sbjct: 797 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMF 856
Query: 970 ERAMQKLDIDGKVIQAGKFDNKSTAXXXXXXXXXXXXGDTNKDDEYSGELDDEELNEILA 1029
++A KL +D V+Q+ + A D + Y +D+E+
Sbjct: 857 DKASLKLGLDKAVLQS--MSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFC 914
Query: 1030 RTEDEKVLFKKIDEERVANE-------KREAIDLGLRKPL----PRLITKEELPSVFTED 1078
+ +++L ++ + +E K + G R + P K + D
Sbjct: 915 EEDIDQILLRRTHTITIESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDID 974
Query: 1079 ITDHLNVEPAAIGRIRERKRVYYDDGLTEEQWLQAVDNDEDLDE 1122
+ N R+R++ R+Y + E++ ++ D + D +E
Sbjct: 975 ALNGRNNLVIDTPRVRKQTRLY--SAVKEDELMEFSDLESDSEE 1016
>CE18196 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 2957
Score = 362 bits (929), Expect = 2e-99
Identities = 199/502 (39%), Positives = 299/502 (58%), Gaps = 49/502 (9%)
Query: 510 GGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNERQPFLVIV 569
G +L+EYQ +G++W++ Y N N ILADEMGLGKT+Q+I+ +S +Y+ PFLV+V
Sbjct: 1184 GNSLREYQFEGVDWLLYCYYNAQNCILADEMGLGKTVQTITFLSRIYDY-GIHGPFLVVV 1242
Query: 570 PLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKALQH---------------TIKMGNFDV 614
PLSTI NW EFE W + IVY G+ R+ LQ D
Sbjct: 1243 PLSTIQNWVREFETWT-DMNAIVYHGSAYAREVLQQYEVFYDKRHCGAKNWKKNFVKIDA 1301
Query: 615 VLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQ 674
++TT+E ++ D L K W +IDE HR+KN KL ++ ++R++LTGTPLQ
Sbjct: 1302 LITTFETVVSDVEFLKKIPWRVCVIDEAHRLKNRNCKLLVNGLLAFRMEHRVLLTGTPLQ 1361
Query: 675 NNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLR 734
NN+ EL++LLNF+ P+ F++S TF E F + +++L ++L+
Sbjct: 1362 NNIDELFSLLNFLHPQQFDNSATFLEQFGS---------------CQTDDQVQKLQEILK 1406
Query: 735 PFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKG 794
P +LRRLK++VEK L K E +++ +LS +Q++ Y +L+ N + GT +
Sbjct: 1407 PMMLRRLKEDVEKSLGPKEETIIEVQLSDMQKKFYRAILERNFSHLCKGTSAPS------ 1460
Query: 795 LNNKVMQLRKICNHPFVFDEVENVI-------NPTRENSSI----LYRVSGKFELLDRVL 843
L N +M+LRK CNHPF+ + E I +P + ++ L + SGK L++++L
Sbjct: 1461 LMNVMMELRKCCNHPFLINGAEEAIMNDFRLAHPDWDEETLAHKALIQASGKVVLIEKLL 1520
Query: 844 PKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEY 903
PK + GH+VL+F QM +V+D++E+FL + R+DG + + R + F+ +S+
Sbjct: 1521 PKLRKDGHKVLIFSQMVKVLDLLEEFLISMSYPFERIDGNVRGDLRQAAIDRFSKENSDR 1580
Query: 904 FCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDS 963
F FLL TRAGGLG+NL ADTVIIFD+DWNP DLQAQ R HRIGQK V++ RLIT+++
Sbjct: 1581 FVFLLCTRAGGLGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQKKLVKVYRLITSNT 1640
Query: 964 VEEVILERAMQKLDIDGKVIQA 985
E + ++A KL +D V+Q+
Sbjct: 1641 YEREMFDKASLKLGLDKAVLQS 1662
>7293795 [R] KOG0383 Predicted helicase
Length = 883
Score = 361 bits (927), Expect = 4e-99
Identities = 208/510 (40%), Positives = 300/510 (58%), Gaps = 40/510 (7%)
Query: 497 IKETVDKQPSIL--VGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISY 554
+ + + QP L G L +Q++G+ W+ + + ILADEMGLGKTIQ++ +
Sbjct: 249 LNKKYEDQPVFLKEAGLKLHPFQIEGVSWLRYSWGQGIPTILADEMGLGKTIQTVVFLYS 308
Query: 555 LYEIKNERQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQR-------------- 600
L++ + R PFL+ VPLST+TNW E E WAP L + Y G R
Sbjct: 309 LFKEGHCRGPFLISVPLSTLTNWERELELWAPELYCVTYVGGKTARAVIRKHEISFEEVT 368
Query: 601 -KALQHTIKMGNFDVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHY 659
K ++ F+V+LT+YE+I D L DWA +++DE HR+++ QSK + +
Sbjct: 369 TKTMRENQTQYKFNVMLTSYEFISVDAAFLGCIDWAALVVDEAHRLRSNQSKF-FRILSK 427
Query: 660 YKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXX 719
Y+ +L+LTGTPLQNNL EL+ LLNF+ FN +TF F
Sbjct: 428 YRIGYKLLLTGTPLQNNLEELFHLLNFLSSGKFNDLQTFQAEFTD--------------- 472
Query: 720 XXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFF 779
++RLH++L P +LRRLK +V K +P K E +V+ +LSS+Q++ Y+ +L N F
Sbjct: 473 VSKEEQVKRLHEILEPHMLRRLKADVLKSMPPKSEFIVRVELSSMQKKFYKHILTKN--F 530
Query: 780 IGAGTEGATKAGIKGLNNKVMQLRKICNHPFVFDEV--ENVINPTR-ENSSILYRVSGKF 836
+G + + L N +M LRK CNHP++F E I+P+ S L + SGK
Sbjct: 531 KALNQKGGGR--VCSLLNIMMDLRKCCNHPYLFPSAAEEATISPSGLYEMSSLTKASGKL 588
Query: 837 ELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLF 896
+LL ++L + KA HRVL+F QMT++++++E FL +Y R+DG K + R + F
Sbjct: 589 DLLSKMLKQLKADNHRVLLFSQMTKMLNVLEHFLEGEGYQYDRIDGSIKGDLRQKAIDRF 648
Query: 897 NAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRIL 956
N P SE+F FLLSTRAGGLG+NL TADTVIIFD+DWNPH D+QA RAHR+GQK +V I
Sbjct: 649 NDPVSEHFVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAHRMGQKKKVMIY 708
Query: 957 RLITTDSVEEVILERAMQKLDIDGKVIQAG 986
R +T +SVEE I++ A K+ + V++ G
Sbjct: 709 RFVTHNSVEERIMQVAKHKMMLTHLVVRPG 738
>Hs22047966 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1953
Score = 360 bits (925), Expect = 6e-99
Identities = 205/495 (41%), Positives = 298/495 (59%), Gaps = 43/495 (8%)
Query: 513 LKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLS 572
L+EYQL+G+ W++ + N N ILADEMGLGKTIQSI+ + +Y + PFLVI PLS
Sbjct: 183 LREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNV-GIHGPFLVIAPLS 241
Query: 573 TITNWTIEFEKWAPSLRTIVYKGNPNQRKALQH----------TIKMG--NFDVVLTTYE 620
TITNW EF W + TIVY G+ R+ +Q + G FD ++TT+E
Sbjct: 242 TITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFE 300
Query: 621 YIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPEL 680
I+ D P L + +W +IIDE HR+KN KL +L H +++++LTGTPLQN + EL
Sbjct: 301 MILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHM-DLEHKVLLTGTPLQNTVEEL 359
Query: 681 WALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRR 740
++LL+F+ P F S F + F +++L +L+P +LRR
Sbjct: 360 FSLLHFLEPSQFPSESEFLKDFGD---------------LKTEEQVQKLQAILKPMMLRR 404
Query: 741 LKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKVM 800
LK++VEK+L K E +++ +L+++Q++ Y +L+ N F+ ++GA + L N +M
Sbjct: 405 LKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL---SKGAGHTNMPNLLNTMM 461
Query: 801 QLRKICNHPFVFDEVEN-VINPTRENSSIL---------YRVSGKFELLDRVLPKFKASG 850
+LRK CNHP++ + E ++ RE I+ R +GK L+D++LPK KA G
Sbjct: 462 ELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGG 521
Query: 851 HRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLST 910
H+VL+F QM + +DI+ED+L R Y R+DG + R + F+ PDS+ F FLL T
Sbjct: 522 HKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCT 581
Query: 911 RAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILE 970
RAGGLG+NL ADT IIFD+DWNP DLQAQ R HRIGQ V++ RLIT +S E + +
Sbjct: 582 RAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFD 641
Query: 971 RAMQKLDIDGKVIQA 985
+A KL +D V+Q+
Sbjct: 642 KASLKLGLDKAVLQS 656
>Hs21914927 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 838
Score = 352 bits (903), Expect = 2e-96
Identities = 216/607 (35%), Positives = 319/607 (51%), Gaps = 83/607 (13%)
Query: 503 KQPSILVGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNER 562
+QP GG ++ YQ++G+EW+ L+ N +NGILADEMGLGKT+Q I+ I+ + + +
Sbjct: 213 QQPKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIALMIQ-RGVP 271
Query: 563 QPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKALQHTI--KMGNFD---VVLT 617
PFLV PLST+ NW EF+++ P + T++Y G +R+ L I + G VV+T
Sbjct: 272 GPFLVCGPLSTLPNWMAEFKRFTPDIPTMLYHGTQEERQKLVRNIYKRKGTLQIHPVVIT 331
Query: 618 TYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNL 677
++E ++DR L W ++I+DEGHR+KN + +L L + N+L+LTGTPLQNNL
Sbjct: 332 SFEIAMRDRNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRF-NADNKLLLTGTPLQNNL 390
Query: 678 PELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFL 737
ELW+LLNF+LP +F+ K+F+ WF+ + V+ LH++L PFL
Sbjct: 391 SELWSLLNFLLPDVFDDLKSFESWFD--ITSLSETAEDIIAKEREQNVLHMLHQILTPFL 448
Query: 738 LRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGAT-----KAGI 792
LRRLK +V ++P K E VV LS Q+ Y ++ + +E T
Sbjct: 449 LRRLKSDVALEVPPKREVVVYAPLSKKQEIFYTAIVNRTIANMFGSSEKETIELSPTGRP 508
Query: 793 KGLNNKVMQLRKICNHPFVFDE---------------------VENVINPTRENSSILYR 831
K K + KI + P ++ VE+ +N +N +L R
Sbjct: 509 KRRTRKSINYSKIDDFPNELEKLISQIQPEVDRERAVVEVNIPVESEVNLKLQNIMMLLR 568
Query: 832 V----------------------------SGKFELLDRVLPKFKASGHRVLMFFQMTQVM 863
SGKF +LDR+LP+ K GH+VL+F QMT ++
Sbjct: 569 KCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQMTSML 628
Query: 864 DIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTAD 923
DI+ D+ +RD + RLDG +R + FN D E F FL+STRAGGLG+NL AD
Sbjct: 629 DILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNT-DPEVFIFLVSTRAGGLGINLTAAD 687
Query: 924 TVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVI 983
TVII+D+DWNP DLQAQDR HRIGQ V + RL+T +++++ I+ERA K ++ +I
Sbjct: 688 TVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 747
Query: 984 QAGKFDNKSTAXXXXXXXXXXXXGDTNKDDEYSGELDDEELNEILARTEDEKVLFKKIDE 1043
F + LD +EL E+L + E+ + K
Sbjct: 748 HKNHFKGGQSGLNLS-----------------KNFLDPKELMELLKSRDYEREI--KGSR 788
Query: 1044 ERVANEK 1050
E+V ++K
Sbjct: 789 EKVISDK 795
>Hs20536191 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 897
Score = 349 bits (896), Expect = 1e-95
Identities = 207/530 (39%), Positives = 297/530 (55%), Gaps = 27/530 (5%)
Query: 508 LVGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNERQPFLV 567
L G L+ YQL+G+ W+ ++ IL DEMGLGKT Q+I+L YL N+ PFL+
Sbjct: 41 LTGIHLRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLI 100
Query: 568 IVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKALQHTIKM-GNFDVVLTTYEYIIKDR 626
+ PLS ++NW E +++AP L + Y G+ +R LQ +K F V+LTTYE +KD
Sbjct: 101 LCPLSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDLKQESRFHVLLTTYEICLKDA 160
Query: 627 PLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNF 686
L W+ +++DE HR+KN S L TL+ + + L+LTGTP+QN+L EL++LL+F
Sbjct: 161 SFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFS-LLLTGTPIQNSLQELYSLLSF 219
Query: 687 VLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVE 746
V P +F+ + D F + + LHK+L+PFLLRR+K EV
Sbjct: 220 VEPDLFSKEEVGD--FIQRYQDIEKESESG----------NELHKLLQPFLLRRVKAEVA 267
Query: 747 KDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKVMQLRKIC 806
+LP K E V+ +S+LQ++ Y+ +L + E T +K L N + QLRK
Sbjct: 268 TELPKKTEVVIYHGMSALQKKYYKAILMKDL----DAFENETAKKVK-LQNILSQLRKCV 322
Query: 807 NHPFVFDEVENVINPTRENSSILYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIM 866
+HP++FD VE E L SGK LLD++L + GHRVL+F QMTQ++DI+
Sbjct: 323 DHPYLFDGVEP---EPFEVGDHLTEASGKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDIL 379
Query: 867 EDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVI 926
+D++ R Y R+DG + E+R +K F F FLLSTRAGG+G+NL ADTVI
Sbjct: 380 QDYMDYRGYSYERVDGSVRGEERHLAIKNFG--QQPIFVFLLSTRAGGVGMNLTAADTVI 437
Query: 927 IFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAG 986
D+D+NP DLQA RAHRIGQ V+++RLI D+VEE++ +A KL + +I+ G
Sbjct: 438 FVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEGG 497
Query: 987 KFD---NKSTAXXXXXXXXXXXXGDTNKDDEYSGELDDEELNEILARTED 1033
F K A G +D+ +L IL T+D
Sbjct: 498 HFTLGAQKPAADADLQLSEILKFGLDKLLASEGSTMDEIDLESILGETKD 547
>SPBP35G2.10 [R] KOG0383 Predicted helicase
Length = 1418
Score = 342 bits (878), Expect = 2e-93
Identities = 228/652 (34%), Positives = 343/652 (51%), Gaps = 63/652 (9%)
Query: 504 QPSILVGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNERQ 563
QPS + GGTL YQLKGL W+ + H ILADEMGLGKT+Q IS IS L+ +++
Sbjct: 547 QPSFIKGGTLMPYQLKGLNWLYLRWYTHHPCILADEMGLGKTVQVISFISVLF-YRHKCF 605
Query: 564 PFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKAL-------QHTIKMGNFDVVL 616
P LVIVP +T+ NW E +KWAP L+ V G+ R + Q K + V++
Sbjct: 606 PVLVIVPHATVANWERELKKWAPFLQINVLVGSEKNRSLVRDYRLINQKDPKHVSTHVLV 665
Query: 617 TTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNN 676
+ + ++ LL K W +I+DEG R+KN QS L Y L+ K+ +L+LTGTPLQNN
Sbjct: 666 ISASNVEREISLLRKFQWKVLIVDEGQRLKNDQSSLFYYLSSV-KSDFKLLLTGTPLQNN 724
Query: 677 LPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPF 736
+ EL+ LL F+ P N+++ + + LH++L+PF
Sbjct: 725 VRELFNLLQFLNPMKINAAELEKRY-----------------SIIDTEKVTELHQILKPF 767
Query: 737 LLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIG-----AGTEGATKAG 791
LRR+K EV + P KVE ++ ++ +Q+ LY+ +L N + A T +
Sbjct: 768 FLRRVKSEVLDNFPTKVEVIIPLSMTPVQKGLYKSILSKNLSLLRNITGYANTSSSGGQR 827
Query: 792 IKGLNNKVMQLRKICNHPFVFD-EVENVINPTRENSSILYRVSGKFELLDRVLPKFKASG 850
LNN +MQLRK HP+++ ++E+ P L S KF +L ++PK G
Sbjct: 828 TTSLNNILMQLRKTLAHPYIYSPDIEDRNLPYELAMRSLEEASCKFLILRLLVPKLITRG 887
Query: 851 HRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLST 910
HR+L+F Q Q +DI+ED+ +++ Y R DG + +R + FNAP+SE CFLLST
Sbjct: 888 HRILLFSQFIQQLDILEDWFEYKNIAYARFDGASSEMERQSAIDSFNAPNSELSCFLLST 947
Query: 911 RAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILE 970
RAGG+G+NL +ADTVII D D+NPHQD+QA RAHR GQK +V + L T DSVEE I++
Sbjct: 948 RAGGVGINLASADTVIILDPDFNPHQDMQAIARAHRYGQKKKVLVFVLTTRDSVEEKIIQ 1007
Query: 971 RAMQKLDIDGKVIQAGKFDNKS-----TAXXXXXXXXXXXXGD--TNKDDEYSGELDDEE 1023
A +KL +D ++++ ++ S + GD + K +EYS EL E
Sbjct: 1008 NAQKKLVLDHLIVESLDQNHNSEKDLESILRHGARALFEEAGDEPSIKYNEYSVELLISE 1067
Query: 1024 LNEILARTEDEKVL-------FKKIDEERVANEKREAIDLGLRKPLPRLITKEELPSVF- 1075
+ + DE + F+ D + +++ E + L+ +E++ SV
Sbjct: 1068 AEKQEDTSTDESDIKSNKFGFFRVWDNKHISSNHYEVKE-------NVLVDEEDVWSVIL 1120
Query: 1076 ---TEDITDHLNVEPAAIGRIRERKRVYYDDGLTEEQWLQAVDNDEDLDETI 1124
+D E + R+R +++Y + L DN +D D T+
Sbjct: 1121 KQREKDAMLEKTDETTSNRRLRAHHKIHYGED------LNIYDNSDDTDYTV 1166
>At5g44800 [R] KOG0383 Predicted helicase
Length = 2228
Score = 340 bits (871), Expect = 1e-92
Identities = 215/584 (36%), Positives = 321/584 (54%), Gaps = 60/584 (10%)
Query: 419 QRLAAL---KSNDEEAYLKLL-----DQTKDTRITHLLKQTNSFLDSLAQAVRVQQNEVR 470
QR+ AL K ++EAY+K + T ++ +LK ++ +D Q +
Sbjct: 590 QRIVALRVSKEGNQEAYVKWTGLAYDECTWESLEEPILKHSSHLIDLFHQ-----YEQKT 644
Query: 471 IKRGEEIPPITDEEREKIDYYEVSHRIKETVDKQPSILVGGTLKEYQLKGLEWMVSLYNN 530
++R + P T E E + T+ +QP L GG L +QL+ L W+ ++
Sbjct: 645 LERNSKGNP-TRERGEVV-----------TLTEQPQELRGGALFAHQLEALNWLRRCWHK 692
Query: 531 HLNGILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLSTITNWTIEFEKWAPSLRT 590
N ILADEMGLGKT+ + + +S LY +P LV+VPLST+ NW EF WAP L
Sbjct: 693 SKNVILADEMGLGKTVSASAFLSSLYFEFGVARPCLVLVPLSTMPNWLSEFSLWAPLLNV 752
Query: 591 IVYKGNPNQRKALQH----------TIKMGN---FDVVLTTYEYIIKDRPLLAKHDWAHM 637
+ Y G+ R ++ T K F+V+LTTYE ++ D L W +
Sbjct: 753 VEYHGSAKGRAIIRDYEWHAKNSTGTTKKPTSYKFNVLLTTYEMVLADSSHLRGVPWEVL 812
Query: 638 IIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKT 697
++DEGHR+KN++SKL ++L + + ++R++LTGTPLQNN+ E++ LLNF+ P F S +
Sbjct: 813 VVDEGHRLKNSESKL-FSLLNTFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPSSFPSLSS 871
Query: 698 FDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVV 757
F+E F+ + L K++ P +LRRLKK+ +++P K E++V
Sbjct: 872 FEERFHD---------------LTSAEKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMV 916
Query: 758 KCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKVMQLRKICNHPFVFDEVEN 817
+L+S+Q + Y ML N + +G + + + N VMQLRK+CNHP++ E
Sbjct: 917 PVELTSIQAEYYRAMLTKNYQILRNIGKGVAQ---QSMLNIVMQLRKVCNHPYLIPGTEP 973
Query: 818 VINPTRENSSILYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMR--DL 875
+ + S K LL +L GHRVL+F QMT+++DI+ED+L +
Sbjct: 974 ESGSLEFLHDMRIKASAKLTLLHSMLKVLHKEGHRVLIFSQMTKLLDILEDYLNIEFGPK 1033
Query: 876 KYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPH 935
+ R+DG DR + FN D F FLLSTRA GLG+NL TADTVII+D+D+NPH
Sbjct: 1034 TFERVDGSVAVADRQAAIARFNQ-DKNRFVFLLSTRACGLGINLATADTVIIYDSDFNPH 1092
Query: 936 QDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDID 979
D+QA +RAHRIGQ + + RL+ SVEE IL+ A +KL +D
Sbjct: 1093 ADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLD 1136
>ECU01g0350 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1251
Score = 339 bits (869), Expect = 2e-92
Identities = 222/675 (32%), Positives = 348/675 (50%), Gaps = 101/675 (14%)
Query: 502 DKQPSILVGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNE 561
++ P G L+EYQL+GL W+++ + + I+ADEMGLGKT+QS++ I+ L+ +
Sbjct: 291 EESPVFKGGNRLREYQLEGLNWLLNRWYYKQSCIMADEMGLGKTVQSVTFINTLFTKYDY 350
Query: 562 RQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKAL---QHTIKMGN-----FD 613
P LV+ PLS I +W EFE W LR + Y N R + + +K N FD
Sbjct: 351 CAPVLVVTPLSIIPHWEREFEAWT-DLRVLKYHENRPGRALIAEYEFVLKKNNLEIRLFD 409
Query: 614 VVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPL 673
V++TTY+ ++ ++ L++ ++ I DE HR+KNA+SK + T+ K ++++L+GTPL
Sbjct: 410 VLITTYDTVMAEQEHLSQFHFSVGIFDEAHRLKNAKSKAA-TILRTLKFNHKVLLSGTPL 468
Query: 674 QNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVL 733
QNN+ ELW+LLNF+ P F+S F F N + +L +L
Sbjct: 469 QNNISELWSLLNFIDPMRFSSLPHFLGEFKMENIND----------------VEKLQGLL 512
Query: 734 RPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIK 793
RP +LRR+K++VEK +P K E +++ L+ +Q++ Y +L+ N F+ G K
Sbjct: 513 RPLMLRRMKEDVEKSIPTKEETIIEVALTMIQKRFYRAILEKNIEFLTKG----GKESAP 568
Query: 794 GLNNKVMQLRKICNHPFVFDEVE------------------------------------- 816
L N +M+LRK C HP++ E
Sbjct: 569 NLLNVMMELRKCCIHPYLIKGAEEQILSGYLKKKRERSKAEGAENDITLTSEVLNEDEHQ 628
Query: 817 ---NVINPTRENSSILYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMR 873
+VI+ E I + SGK LLD++L K K GH+VL+F QMT+ +D++ ++L R
Sbjct: 629 DGNSVISDIDEYYKIFIQSSGKLVLLDKLLGKLK-DGHKVLIFSQMTRCLDLLAEYLAYR 687
Query: 874 DLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWN 933
KY R+DGG + E+R + F+ S+ F FLLSTRAGG+G+NL ADTVIIFD+DWN
Sbjct: 688 KYKYERIDGGARTENRQAAIDRFSDKTSDVFVFLLSTRAGGVGINLTAADTVIIFDSDWN 747
Query: 934 PHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKST 993
P DLQAQ R HRIGQ +EV++ RL+T ++ E + ++A KL +D V+Q F+ + +
Sbjct: 748 PQNDLQAQARCHRIGQTSEVKVYRLVTENTYEREMFDKAGLKLGLDRAVLQKMTFEEQKS 807
Query: 994 AXXXXXXXXXXXXGD------TNKDDEYSGELDDEELNEILART------EDEKVLFKKI 1041
DD S + +E++++IL R D +F K
Sbjct: 808 EKTRKKDAIETLLRKGAYGVLMETDDASSRKFCEEDIDQILERRTKIVKHSDGGNVFSKA 867
Query: 1042 D-------------EERVANEKREAIDLGLRKPLPRLITKEELPSVFTEDITDHLNVEPA 1088
E ++ K E + +R+ + RL + L S +I + LN +
Sbjct: 868 SFQVEEEIDDPDFWENLLSKRKSEESEGRIRRQMRRLAREGGLSSEDISEIDELLNTKLE 927
Query: 1089 AIGRIRERKRVYYDD 1103
+ E + V+Y++
Sbjct: 928 S-----EDENVFYEN 937
>At2g44980 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 861
Score = 318 bits (814), Expect = 5e-86
Identities = 195/494 (39%), Positives = 281/494 (56%), Gaps = 32/494 (6%)
Query: 509 VGGTLKEYQLKGLEWMVSLYNNHLNGILA-DEMGLGKTIQSISLISYLYEIKNERQPFLV 567
V TLK +Q++G+ W++ Y +N +L D+MGLGKT+Q+IS +SYL + PFLV
Sbjct: 47 VTATLKPHQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISFLSYLKFRQGLPGPFLV 106
Query: 568 IVPLSTITNWTIEFEKWAPSLRTIVYKGNP----NQRKALQHTIKMGNFDVVLTTYEYII 623
+ PLS W E ++ P+L + Y G+ + RK++ FDV+LTTY+ +
Sbjct: 107 LCPLSVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRKSMYDHGHFLPFDVLLTTYDIAL 166
Query: 624 KDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWAL 683
D+ L++ W + IIDE R+KN S L L + RL++TGTP+QNNL ELWAL
Sbjct: 167 VDQDFLSQIPWQYAIIDEAQRLKNPNSVLYNVLLEQFLIPRRLLITGTPIQNNLTELWAL 226
Query: 684 LNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKK 743
++F +P +F T D+ F + F TG + L +L F+LRR K
Sbjct: 227 MHFCMPLVFG---TLDQ-FLSAFKETGDGLDVSNDKETY----KSLKFILGAFMLRRTKS 278
Query: 744 EVEKD----LPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKV 799
+ + LP E V L SLQ+++Y +L+ + + G + L N V
Sbjct: 279 LLIESGNLVLPPLTELTVMVPLVSLQKKIYTSILRKELPGLLELSSGGSNH--TSLQNIV 336
Query: 800 MQLRKICNHPFVFDEVENVINPTRENSSILYRVSGKFELLDRVLPKFKASGHRVLMFFQM 859
+QLRK C+HP++F +E P E ++ + SGK +LD++L + SGHRVL+F QM
Sbjct: 337 IQLRKACSHPYLFPGIEP--EPFEEGEHLV-QASGKLLVLDQLLKRLHDSGHRVLLFSQM 393
Query: 860 TQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAP-----DSEY-----FCFLLS 909
T +DI++DF+ +R Y RLDG +AE+R +K F+A DSE F F++S
Sbjct: 394 TSTLDILQDFMELRRYSYERLDGSVRAEERFAAIKNFSAKTERGLDSEVDGSNAFVFMIS 453
Query: 910 TRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVIL 969
TRAGG+GLNL ADTVI ++ DWNP D QA RAHRIGQ + V + L+T SVEEVIL
Sbjct: 454 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQISHVLSINLVTEHSVEEVIL 513
Query: 970 ERAMQKLDIDGKVI 983
RA +KL + V+
Sbjct: 514 RRAERKLQLSHNVV 527
>7297570 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 844
Score = 307 bits (787), Expect = 6e-83
Identities = 192/528 (36%), Positives = 284/528 (53%), Gaps = 60/528 (11%)
Query: 503 KQPSILVGGT-LKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNE 561
+QP +L G L +YQ+ GL W+ ++ +NGILADEMGLGKTIQ I+ ++YL E
Sbjct: 278 EQPKLLSSGLQLADYQIIGLNWLTVMHKQEMNGILADEMGLGKTIQVIAFLAYLKENGLS 337
Query: 562 RQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKALQHTIK---MGNFDVVLTT 618
+ L++VP ST+ NW E +W P L Y G+ ++R+ ++ FDV+LTT
Sbjct: 338 QAAHLIVVPSSTLDNWEAEISRWCPELVVEKYHGSQDERRRMRGRFAKDGFTGFDVLLTT 397
Query: 619 YEYI---IKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQN 675
Y + ++R + ++I DE H +KN ++ Y + R++LTGTPLQN
Sbjct: 398 YHIVGSTPEERKMFRVCKLDYVIFDEAHMLKNMTTQ-RYANLITINARMRILLTGTPLQN 456
Query: 676 NLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXV-IRRLHKVLR 734
NL EL +LL FV+PK F S E + FA G I+R ++++
Sbjct: 457 NLLELISLLCFVMPKFFAKS---IEDIKSLFAKKGKSDGDQDEVSQFQETQIQRAKRIMK 513
Query: 735 PFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKG 794
PF+LRRLKK+V K+LP K+ V K +SS Q+ Y +++ + + G + +AGI
Sbjct: 514 PFVLRRLKKDVLKNLPKKLSLVEKVPMSSQQKIYYHELVDYYSNNKGEVCSSSERAGIA- 572
Query: 795 LNNKVMQLRKICNHPFVF-------------DEVENVINPTRENSSILYRV--------- 832
+M++R+I NHP + + N + + N ++
Sbjct: 573 ---IMMEMRRIANHPLLMRHYFTDANLRGFSKRLANASSFKKTNEQYIFEELAVMSDFQV 629
Query: 833 ---------------------SGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLR 871
SGKF LD +LPK KA GHRVL+F Q T ++DI+E++LR
Sbjct: 630 YQMMNKHEFYDVKIPDNLICDSGKFLYLDTLLPKLKAEGHRVLLFSQFTMMLDIVEEYLR 689
Query: 872 MRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTD 931
+R + RLDG T R ++ FN DS F FLLST+AGG+G+NL ADT +I D D
Sbjct: 690 IRKFGFCRLDGATAVNVRQDLITDFNGDDS-IFVFLLSTKAGGVGINLTAADTCVIHDID 748
Query: 932 WNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDID 979
+NP+ D QA+DR HR+GQ+ V I RLI+ ++EE IL A +KL ++
Sbjct: 749 FNPYNDKQAEDRCHRMGQQRPVTIYRLISESTIEEGILMAAEEKLKLE 796
>Hs14149730 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 1026
Score = 306 bits (784), Expect = 1e-82
Identities = 195/545 (35%), Positives = 299/545 (54%), Gaps = 74/545 (13%)
Query: 503 KQPSILVGG-TLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNE 561
+QPSIL +LK YQ GL W+ ++ + LNGILADEMGLGKTIQ+I+ ++YLY+ +
Sbjct: 486 EQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQ-EGN 544
Query: 562 RQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKALQHTI--KMGNFDVVLTTY 619
P L++VP STI NW E W P+L+ + Y G+ +RK ++ I + +++V++TTY
Sbjct: 545 NGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRFNIHSRYEDYNVIVTTY 604
Query: 620 EYIIK---DRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNN 676
I DR L + + I DEGH +KN S + Y NRL+LTGTP+QNN
Sbjct: 605 NCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGS-IRYQHLMTINANNRLLLTGTPVQNN 663
Query: 677 LPELWALLNFVLPKIFNSSKT-FDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRP 735
L EL +LLNFV+P +F+SS + F++ + I ++++P
Sbjct: 664 LLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKER------IAHAKQIIKP 717
Query: 736 FLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQM---LKHNAFFIGAGTEGATKAGI 792
F+LRR+K+EV K LP K +++ C +S Q+QLY + LK + + TE
Sbjct: 718 FILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNLEKNTE------- 770
Query: 793 KGLNNKVMQLRKICNHP-------------------------------FVFDEVENV--- 818
+ N +MQLRK+ NHP +F+++E +
Sbjct: 771 --MCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDF 828
Query: 819 -----------INPTRENSSILYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIME 867
IN + + ++ SGKF +L +L + K G RV++F Q T ++DI+E
Sbjct: 829 ELHVLCKQYRHINNFQLDMDLILD-SGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILE 887
Query: 868 DFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVII 927
L+ +Y+RLDG T+ +R ++ FN D + F FLLST+AGGLG+NL +A+ VI+
Sbjct: 888 VLLKHHQHRYLRLDGKTQISERIHLIDEFNT-DMDIFVFLLSTKAGGLGINLTSANVVIL 946
Query: 928 FDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGK 987
D D NP+ D QA+DR HR+GQ EV +++LI+ ++EE +L+ QKL ++ + +
Sbjct: 947 HDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDE 1006
Query: 988 FDNKS 992
D S
Sbjct: 1007 GDEGS 1011
>CE16277 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 1038
Score = 305 bits (780), Expect = 4e-82
Identities = 190/533 (35%), Positives = 281/533 (52%), Gaps = 63/533 (11%)
Query: 505 PSILVGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNERQP 564
P + G TL +YQL G++W++ +YN LN IL DEMGLGKTIQ ++ +SYL +I + P
Sbjct: 386 PLLKEGCTLHDYQLIGVKWLIMMYNKDLNAILGDEMGLGKTIQIVAFLSYLKQI-GKTGP 444
Query: 565 FLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKALQHTIK--MGNFDVVLTTYEYI 622
L++VP STI NW EF KW PS++ + Y G+ ++RK L+H +K + DV+LTTY +
Sbjct: 445 HLIVVPSSTIENWIGEFHKWCPSIQLLTYYGSQDERKHLRHRVKKQKDHIDVILTTYNMV 504
Query: 623 IK---DRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPE 679
D+ ++I DEGH +KN S+ Y K K +++LTGTPLQNNL E
Sbjct: 505 TSKSDDKKFFKNFSLNYVIYDEGHMLKNCDSE-RYRGLMKVKGKKKILLTGTPLQNNLIE 563
Query: 680 LWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLR 739
L +L+ FVL K+FN F G I +L+P++LR
Sbjct: 564 LISLMYFVLSKVFNKYCEDITHLLQHFKQLGPALDTKNKALYQQDRIEEAKAILQPYILR 623
Query: 740 RLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKV 799
RLK +V LP K E++++ ++ Q+QLY+ +++ + E G +
Sbjct: 624 RLKNQVLGSLPSKSEQIIEVEMKKPQKQLYDNIVE----ALQQSEESGDSYG------SL 673
Query: 800 MQLRKICNHPFV---------FDEVENVI------------------------------- 819
M+LR+ NHP + D++ ++
Sbjct: 674 MRLRQAANHPLLRRSEYTDQKLDKIAKMLCLREKAYADKKWQHVSEDLAWLSDIKIHQLC 733
Query: 820 NPTRENSSILYR-----VSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRD 874
R S L SGK E LD +LP+ + G +VL+F Q T ++DI+E +L +R
Sbjct: 734 ERFRCTSKFLLNEQLALKSGKCEQLDVMLPEIQKKGDKVLIFSQFTSMLDILEVYLNIRG 793
Query: 875 LKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNP 934
Y RLDG T DR M+ FN + F FLLSTRAGGLG+NL +A+ +II D D+NP
Sbjct: 794 YSYKRLDGQTPVLDRQEMINEFNL-SKDLFVFLLSTRAGGLGINLTSANHIIIHDIDFNP 852
Query: 935 HQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGK 987
+ D QA+DR HR+GQ+ V + RL++ +VE +L A +KL ++ +V K
Sbjct: 853 YNDKQAEDRCHRMGQEKPVHVTRLVSKGTVEVGMLALAKKKLQLEKQVTDGVK 905
>YPL082c [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1867
Score = 301 bits (772), Expect = 4e-81
Identities = 198/595 (33%), Positives = 313/595 (52%), Gaps = 58/595 (9%)
Query: 434 KLLDQTKDTRITHLLKQTNSFLDSLAQAVRVQQNEVRIKRGEEIPP--ITDEEREKIDYY 491
++ D +D R N + A +++ E I + +P + ERE+
Sbjct: 1200 RMSDSNEDVR--------NLATTTFASIIKLVPLEAGIADPKGLPEELVASRERERDFIQ 1251
Query: 492 EVSHRIKETVDKQPSILVGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISL 551
++ K K P I + TL++YQ G+ W+ L HL+GIL D+MGLGKT+Q+I +
Sbjct: 1252 QMMDPSKAKPFKLP-IAIKATLRKYQQDGVNWLAFLNKYHLHGILCDDMGLGKTLQTICI 1310
Query: 552 IS---YL----YE----IKNERQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQR 600
I+ YL YE +++ P L+I P S +W EF+++AP L+ +VY G P R
Sbjct: 1311 IASDQYLRKEDYEKTRSVESRALPSLIICPPSLTGHWENEFDQYAPFLKVVVYAGGPTVR 1370
Query: 601 KALQHTIKMGNFDVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYY 660
L+ ++ + D+++T+Y+ D +L K ++ + ++DEGH +KN+QSKL+ +
Sbjct: 1371 LTLRP--QLSDADIIVTSYDVARNDLAVLNKTEYNYCVLDEGHIIKNSQSKLAKAVKEI- 1427
Query: 661 KTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXX 720
+RLILTGTP+QNN+ ELW+L +F++P + K F E F P A +
Sbjct: 1428 TANHRLILTGTPIQNNVLELWSLFDFLMPGFLGTEKMFQERFAKPIAASRNSKTSSKEQE 1487
Query: 721 XXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFI 780
+ LHK + PF+LRRLK++V DLP K+ + C+L LQ+QLY K +
Sbjct: 1488 AGVLALEALHKQVLPFMLRRLKEDVLSDLPPKIIQDYYCELGDLQKQLYMDFTKKQKNVV 1547
Query: 781 GAGTEGATKA-GIKGLNNKVMQLRKICNHPFVFD-------------------EVENVIN 820
E + A G + + + +RK+CNHP + ++ ++IN
Sbjct: 1548 EKDIENSEIADGKQHIFQALQYMRKLCNHPALVLSPNHPQLAQVQDYLKQTGLDLHDIIN 1607
Query: 821 PTRENS--SILYRVSGKFELLDRVLPKFK-------ASGHRVLMFFQMTQVMDIMEDFL- 870
+ ++ ++L+ E +D+ + + S HR L+F Q+ ++D++E+ L
Sbjct: 1608 APKLSALRTLLFECGIGEEDIDKKASQDQNFPIQNVISQHRALIFCQLKDMLDMVENDLF 1667
Query: 871 --RMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIF 928
M + YMRLDG DR +++ FN D C LL+T+ GGLGLNL ADTVI
Sbjct: 1668 KKYMPSVTYMRLDGSIDPRDRQKVVRKFNE-DPSIDCLLLTTKVGGLGLNLTGADTVIFV 1726
Query: 929 DTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVI 983
+ DWNP DLQA DRAHRIGQK V + R+IT ++EE I+ K++I V+
Sbjct: 1727 EHDWNPMNDLQAMDRAHRIGQKKVVNVYRIITKGTLEEKIMGLQKFKMNIASTVV 1781
>YAL019w [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 1131
Score = 284 bits (726), Expect = 8e-76
Identities = 189/537 (35%), Positives = 279/537 (51%), Gaps = 66/537 (12%)
Query: 512 TLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPL 571
+LK+YQ G+ W+ LY N ++ ILAD+MGLGKT Q IS +YL +I NE P LV+VP
Sbjct: 571 SLKDYQQTGINWLNLLYQNKMSCILADDMGLGKTCQVISFFAYLKQI-NEPGPHLVVVPS 629
Query: 572 STITNWTIEFEKWAPSLRTIVYKGNPNQRKALQHTIK--MGNFDVVLTTYEYII---KDR 626
ST+ NW EF+K+AP+L+ Y G+ +R+ L+ ++ G +DV++TTY D
Sbjct: 630 STLENWLREFQKFAPALKIEPYYGSLQEREELRDILERNAGKYDVIVTTYNLAAGNKYDV 689
Query: 627 PLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNF 686
L ++ ++ DEGH +KN+ S+ + + RL+LTGTPLQNNL EL +LL F
Sbjct: 690 SFLKNRNFNVVVYDEGHMLKNSTSE-RFAKLMKIRANFRLLLTGTPLQNNLKELMSLLEF 748
Query: 687 VLPKIFNSSK-TFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEV 745
++P +F S K +FD F T I R +++PF+LRR K +V
Sbjct: 749 IMPNLFISKKESFDAIFKQRAKTT--DDNKNHNPLLAQEAITRAKTMMKPFILRRRKDQV 806
Query: 746 EKDLPDKVEKVVKCKLSSLQQQLYEQ----MLKHNAFF----IGAGTEGATKAGIKGLNN 797
K LP K + C+L+++Q+++Y++ +L+H + + +K N
Sbjct: 807 LKHLPPKHTHIQYCELNAIQKKIYDKEIQIVLEHKRMIKDGELPKDAKEKSKLQSSSSKN 866
Query: 798 KVMQLRKICNHPFVFDEVENVINPTRENSSIL---------------------------- 829
+M LRK HP +F + N T+ + +IL
Sbjct: 867 LIMALRKASLHPLLFRNIYNDKIITKMSDAILDEPAYAENGNKEYIKEDMSYMTDFELHK 926
Query: 830 ------------------YRVSGKFELLDRVLPKFKA-SGHRVLMFFQMTQVMDIMEDFL 870
+ SGK + L ++L +VL+F TQV+DI+E L
Sbjct: 927 LCCNFPNTLSKYQLHNDEWMQSGKIDALKKLLKTIIVDKQEKVLIFSLFTQVLDILEMVL 986
Query: 871 RMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDT 930
D K++RLDG T+ DR ++ F D + F+LST+AGG G+NL A+ VIIFD
Sbjct: 987 STLDYKFLRLDGSTQVNDRQLLIDKF-YEDKDIPIFILSTKAGGFGINLVCANNVIIFDQ 1045
Query: 931 DWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGK 987
+NPH D QA DRAHR+GQ EV I LIT DS+EE I + A KL +D + + K
Sbjct: 1046 SFNPHDDRQAADRAHRVGQTKEVNITTLITKDSIEEKIHQLAKNKLALDSYISEDKK 1102
>SPCC1235.05c [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 1284
Score = 283 bits (723), Expect = 2e-75
Identities = 191/582 (32%), Positives = 289/582 (48%), Gaps = 66/582 (11%)
Query: 501 VDKQPSILVGGT-LKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIK 559
V +QP L LK YQL G+ W+ LY L+GILADEMGLGKT Q ++ + L E +
Sbjct: 537 VTEQPKTLASDVQLKSYQLVGVNWLHLLYQQKLSGILADEMGLGKTCQVVAFFALLLE-Q 595
Query: 560 NERQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKALQHTIKMG--NFDVVLT 617
P LV+VP ST+ NW E ++ PSLR Y G+ +R ++ I+ +D+++T
Sbjct: 596 GHHGPHLVVVPSSTLENWLRELARFCPSLRVEPYYGSQQERANIREAIEENEIKYDILVT 655
Query: 618 TYEYII---KDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQ 674
TY+ +DR L ++ + DEGH +KN S+ Y RL+LTGTPLQ
Sbjct: 656 TYQLATNNKEDRSFLKHQNFDVCVYDEGHYLKNRMSE-RYKHLMNLNANFRLLLTGTPLQ 714
Query: 675 NNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLR 734
NNL EL +LL F+LP +F+S + + F I R ++
Sbjct: 715 NNLKELVSLLAFILPNMFDSDM---DDLDVIFKAKPTADADIEQALLSKQRISRAKTMMT 771
Query: 735 PFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLY---------EQMLKHNAFFIGAGTE 785
PF+LRR K +V DLP K + + CKLS Q ++Y +Q+ + + + +
Sbjct: 772 PFVLRRRKNQVLNDLPKKTQIIEHCKLSENQLEIYNRYAALQKNQQLRRDDKRNKRSKND 831
Query: 786 GATKAGIKGLNNKVMQLRKICNH-------------------------------PFVFDE 814
+ + +MQLRK NH +++++
Sbjct: 832 EESDGKSLSAGHVLMQLRKAANHALLFRKFYDDEKLKQMAKDIMQEEQYKNANEQYIYED 891
Query: 815 VENVIN----------PTRENSSIL---YRVSGKFELLDRVLPKFKASGHRVLMFFQMTQ 861
+E + + PT ++ ++ + SGK +L +LPK K G R+L+F Q TQ
Sbjct: 892 MEVMSDFELHRLCRSFPTLQSYTLKDDPWMDSGKIRVLKELLPKMKEEGSRILLFSQFTQ 951
Query: 862 VMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQT 921
++DI+E L + Y+RLDG T+ E R ++ F+ + + FLLST+AGG G+NL
Sbjct: 952 MLDILEQVLDTLKISYVRLDGSTQVEVRQDIIDQFH-KEEDVTVFLLSTKAGGFGINLAC 1010
Query: 922 ADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGK 981
A+ VI++D +NP DLQA+DRAHR+GQ EV ++RLIT +++EE I + A KL +D
Sbjct: 1011 ANVVILYDCSYNPFDDLQAEDRAHRVGQVREVTVIRLITDNTIEEYIQKLANTKLALDMS 1070
Query: 982 VIQAGKFDNKSTAXXXXXXXXXXXXGDTNKDDEYSGELDDEE 1023
+ GK D + N E +G D E
Sbjct: 1071 LSSDGK-DREEIGERLVQDMLDEENNGNNTKPEITGNESDGE 1111
>YJR035w [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26
(contains SNF2 family DNA-dependent ATPase domain)
Length = 1085
Score = 279 bits (714), Expect = 2e-74
Identities = 170/521 (32%), Positives = 265/521 (50%), Gaps = 64/521 (12%)
Query: 513 LKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLS 572
L YQ ++W+ LY + GI+ DEMGLGKTIQ I+ I+ L+ P L++ P +
Sbjct: 297 LFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALHHSGLLTGPVLIVCPAT 356
Query: 573 TITNWTIEFEKWAPSLRTIV-------------------------------------YKG 595
+ W EF+ W P LRT++ +K
Sbjct: 357 VMKQWCNEFQHWWPPLRTVILHSMGSGMASDQKFKMDENDLENLIMNSKPSDFSYEDWKN 416
Query: 596 NPNQRKALQHTIKMGNF--------DVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKN 647
+ +KAL+ + + +++TTY + L K W + ++DEGH+++N
Sbjct: 417 STRTKKALESSYHLDKLIDKVVTDGHILITTYVGLRIHSDKLLKVKWQYAVLDEGHKIRN 476
Query: 648 AQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFA 707
S++S T KT NR+IL+GTP+QNNL ELW+L +F+ P + F + F P
Sbjct: 477 PDSEISLTCKKL-KTHNRIILSGTPIQNNLTELWSLFDFIFPGKLGTLPVFQQQFVIPIN 535
Query: 708 NTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQ 767
G L ++ P+LLRR+K +V KDLP K E V+ CKL+ Q+
Sbjct: 536 IGGYANATNIQVQTGYKCAVALRDLISPYLLRRVKADVAKDLPQKKEMVLFCKLTKYQRS 595
Query: 768 LYEQMLKHNAFFIGAGTEGATKAGIKGLNNKVMQLRKICNHPFVFDEVENVINPTRENSS 827
Y + F+ + + G + + + LRKICNHP + D NP +
Sbjct: 596 KYLE-------FLHSSDLNQIQNGKRNVLFGIDILRKICNHPDLLDRDTKRHNPDYGDP- 647
Query: 828 ILYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRD-----LKYMRLDG 882
+ SGK +++ ++L + G++ L+F Q Q++DI+E+F+ +D L Y+R+DG
Sbjct: 648 ---KRSGKMQVVKQLLLLWHKQGYKALLFTQSRQMLDILEEFISTKDPDLSHLNYLRMDG 704
Query: 883 GTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQD 942
T + R ++ FN + + FLL+TR GGLG+NL A+ +IIFD DWNP D+QA++
Sbjct: 705 TTNIKGRQSLVDRFN--NESFDVFLLTTRVGGLGVNLTGANRIIIFDPDWNPSTDMQARE 762
Query: 943 RAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVI 983
RA RIGQK EV I RL+ S+EE I R + K + +++
Sbjct: 763 RAWRIGQKREVSIYRLMVGGSIEEKIYHRQIFKQFLTNRIL 803
>SPAC20G8.08c [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 944
Score = 276 bits (707), Expect = 1e-73
Identities = 193/528 (36%), Positives = 268/528 (50%), Gaps = 67/528 (12%)
Query: 503 KQPSILVGG-TLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNE 561
+QPS + G TLK YQ+ GL W+ +Y L+GILADEMGLGKT Q IS ++ L E K
Sbjct: 403 QQPSSIASGITLKSYQIVGLNWLCLMYKAKLSGILADEMGLGKTCQVISFLASLKE-KGI 461
Query: 562 RQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKALQHTIKMGNFDVVLTTYEY 621
+ LV+VP ST+ NW EFEK+ PSLR Y G ++R ++ + +FDV++TTY+
Sbjct: 462 QNRHLVVVPSSTLGNWLREFEKFCPSLRVESYSGTQSERINKRYYLMDTDFDVLVTTYQL 521
Query: 622 II---KDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLP 678
DR L K + I DEGH +KN S+ Y RL++TGTPLQNNL
Sbjct: 522 ASGSRDDRSFLRKQRFDISIFDEGHYLKNRMSE-RYKHLMNIPANFRLLITGTPLQNNLK 580
Query: 679 ELWALLNFVLPKIF-NSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFL 737
EL +LL F+LPK+F N+ + D + + G I R ++ PF+
Sbjct: 581 ELISLLAFMLPKVFDNNMQGLDIIYKIKTTSDGDIERAYLSQER----ISRAKTIMNPFI 636
Query: 738 LRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGLNN 797
LRR K+ V DLP K++ V C + Q LY +L+ + A E N
Sbjct: 637 LRRRKENVLSDLPPKIQHVEYCHMEETQLSLYLSVLELKN-LVNANRE-----------N 684
Query: 798 KVMQLRKICNHPFVFDEVENVINPTRENSSIL----------------YRVSGKFELLD- 840
+MQLRK H +F N+ + + IL V FEL
Sbjct: 685 ILMQLRKAALHQLLFRSQYNLETLSLMSKRILREDAYLDANPQYIFEDMEVMSDFELHKL 744
Query: 841 ----RVLPKFKASG----------------------HRVLMFFQMTQVMDIMEDFLRMRD 874
R L F G R+L+F Q TQV+DI+E L D
Sbjct: 745 ADQYRHLHPFALKGKPWMDSAKVKKLCSLLKKSRPNERILIFSQFTQVLDILEYVLNTLD 804
Query: 875 LKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNP 934
L+++RLDG T E R ++ F+ + Y FLLST++GG G+NL A+ VI+FD +NP
Sbjct: 805 LEFLRLDGSTPVETRQQLIDDFHT-NENYKVFLLSTKSGGFGINLTCANIVILFDCSFNP 863
Query: 935 HQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKV 982
D+QA+DRAHR+GQ V + RLIT +++EE I A KL ++ +
Sbjct: 864 FDDMQAEDRAHRVGQTRPVHVYRLITKNTIEENIRRLANTKLTLESSL 911
>SPBC1826.01c [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 635
Score = 275 bits (703), Expect = 4e-73
Identities = 197/628 (31%), Positives = 304/628 (48%), Gaps = 89/628 (14%)
Query: 509 VGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISY-------LYEIKNE 561
+ L++YQ +G+ W+ L L+GIL D+MGLGKT+Q+I +++ L+E
Sbjct: 36 ISADLRKYQQEGVNWLAFLNKYELHGILCDDMGLGKTLQTICIVASDHYNRQKLFEESGS 95
Query: 562 RQ----PFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKALQHTIKMGNFDVVLT 617
+ P L++ P + +W E +AP L+ Y G P +R ++ KM DVV+T
Sbjct: 96 PKFAHVPSLIVCPSTLAGHWQQELSTYAPFLKVSAYVGPPAERAKIRS--KMKKSDVVVT 153
Query: 618 TYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNL 677
+Y+ D L K DW + ++DEGH +KNA++KL+ + ++ +RLIL+GTP+QNN+
Sbjct: 154 SYDICRNDVDELVKIDWNYCVLDEGHVIKNARAKLTKAVKSL-RSYHRLILSGTPIQNNV 212
Query: 678 PELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFL 737
ELW+L +F++P + KTF E F P A + + +HK + PF+
Sbjct: 213 LELWSLFDFLMPGFLGTEKTFQERFVRPIAASRDAKSSSKERERGTLALEAIHKQVLPFM 272
Query: 738 LRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGLNN 797
LRRLK++V DLP K+ + C +S LQ++L + + I E +G
Sbjct: 273 LRRLKEDVLADLPPKIIQDYYCDMSDLQRKLLNDFV--SQLNINEELEDDETEKTQGTRK 330
Query: 798 KVMQ----------LRKICNHPFVFDEVEN------VINPTRENSSI------------- 828
K Q +RK+CNHP + ++ V +ENS +
Sbjct: 331 KKSQKAHIFQALQYMRKLCNHPALILTEKHPKRNAIVKQLAKENSGLHDLKHAPKLTALG 390
Query: 829 -------LYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIME-DFLR--MRDLKYM 878
L S +D L S HRVL+F Q+ ++D++E D L+ M D+ YM
Sbjct: 391 QLLRDCGLGNSSVNSNGIDSALTN-AVSEHRVLIFCQLKDMLDMVEKDLLQATMPDVTYM 449
Query: 879 RLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDL 938
RLDG + R + FN D LL+T GGLGLNL ADTVI + DWNP +DL
Sbjct: 450 RLDGSVEPTKRQEAVTKFN-NDPSIDVLLLTTHVGGLGLNLTGADTVIFVEHDWNPMRDL 508
Query: 939 QAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKSTAXXXX 998
QA DRAHRIGQK V + RLIT +EE I+ K+++ V+
Sbjct: 509 QAMDRAHRIGQKKVVNVYRLITRGCLEEKIMGLQRFKMNVASTVV--------------- 553
Query: 999 XXXXXXXXGDTNKDDEYSGELDDEELNEILARTEDEKVLFKKIDEERVANEKREAIDLGL 1058
N+ + + +++ ++ T DE+ + ID+E E +A GL
Sbjct: 554 -----------NQQNAGLSSIGTDQILDLFNTTADEQQTVQNIDKE----ESEDAAGRGL 598
Query: 1059 RKPLPRLITKEELPSVFTEDITDHLNVE 1086
+ + E LP ++ E D N++
Sbjct: 599 SGTSKKAL--EGLPEMWDESQYDEFNLD 624
>At2g02090 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 763
Score = 274 bits (700), Expect = 8e-73
Identities = 193/546 (35%), Positives = 265/546 (48%), Gaps = 91/546 (16%)
Query: 513 LKEYQLKGLEWMVSLYNNHLNG-ILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPL 571
LK YQL G+ +++ LY + G ILADEMGLGKTIQ+I+ ++ L + N+ P LV+ P
Sbjct: 213 LKPYQLVGVNFLLLLYKKGIEGAILADEMGLGKTIQAITYLTLLSRLNNDPGPHLVVCPA 272
Query: 572 STITNWTIEFEKWAPSLRTIVYKG-----NPNQRKALQHTIKMGNFDVVLTTYEYIIK-- 624
S + NW E KW PS + Y G + +L K F+V+L Y +
Sbjct: 273 SVLENWERELRKWCPSFTVLQYHGAARAAYSRELNSLSKAGKPPPFNVLLVCYSLFERHS 332
Query: 625 -----DRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKN-RLILTGTPLQNNLP 678
DR +L + W+ +++DE H +K+ S L + N RL+LTGTPLQN+L
Sbjct: 333 EQQKDDRKVLKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 392
Query: 679 ELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLL 738
ELW+LL F+LP IF T +I R+ +L PF+L
Sbjct: 393 ELWSLLEFMLPDIF---------------TTENVDLKKLLNAEDTELITRMKSILGPFIL 437
Query: 739 RRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGLN-- 796
RRLK +V + L K+++V + Q+ Y++ ++ + A K K LN
Sbjct: 438 RRLKSDVMQQLVPKIQRVEYVLMERKQEDAYKEAIEE---YRAASQARLVKLSSKSLNSL 494
Query: 797 ----------NKVMQLRKICNHPFVFDEV---ENVINPTRENSSI--------LYRV--- 832
N Q RKI NHP + + E+VI R+ I L RV
Sbjct: 495 AKALPKRQISNYFTQFRKIANHPLLIRRIYSDEDVIRIARKLHPIGAFGFECSLDRVIEE 554
Query: 833 --------------------------------SGKFELLDRVLPKFKASGHRVLMFFQMT 860
S K L +LP K SGHRVL+F Q T
Sbjct: 555 VKGFNDFRIHQLLFQYGVNDTKGTLSDKHVMLSAKCRTLAELLPSMKKSGHRVLIFSQWT 614
Query: 861 QVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQ 920
++DI+E L + + Y RLDG T+ DR ++ FN D F LLSTRAGG GLNL
Sbjct: 615 SMLDILEWTLDVIGVTYRRLDGSTQVTDRQTIVDTFN-NDKSIFACLLSTRAGGQGLNLT 673
Query: 921 TADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDG 980
ADTVII D D+NP D QA+DR HRIGQ V I RL+T +V+E I E A +KL +D
Sbjct: 674 GADTVIIHDMDFNPQIDRQAEDRCHRIGQTKPVTIFRLVTKSTVDENIYEIAKRKLVLDA 733
Query: 981 KVIQAG 986
V+++G
Sbjct: 734 AVLESG 739
>Hs4557565 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26
(contains SNF2 family DNA-dependent ATPase domain)
Length = 1493
Score = 272 bits (696), Expect = 2e-72
Identities = 166/540 (30%), Positives = 283/540 (51%), Gaps = 36/540 (6%)
Query: 467 NEVRIKRGEEIPPITDEEREKIDYYEVSHRIKETVDKQPSILVGGTLKEYQLKGLEWMVS 526
N++R++ E+ + D+ E ++ ++ + K+ L +YQ G+ W+
Sbjct: 469 NKLRLQDKEKRLKLEDDSEESDAEFDEGFKVPGFLFKK--------LFKYQQTGVRWLWE 520
Query: 527 LYNNHLNGILADEMGLGKTIQSISLISYLYEIKNERQ----------PFLVIVPLSTITN 576
L+ GIL DEMGLGKTIQ I+ ++ L K + P +++ P + +
Sbjct: 521 LHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQ 580
Query: 577 WTIEFEKWAPSLRTIVYKGNPNQRKALQHTIK--MGNFDVVLTTYEYIIKDRPLLAKHDW 634
W EF W P R + + + I+ +++T+Y YI + ++++DW
Sbjct: 581 WVKEFHTWWPPFRVAILHETGSYTHKKEKLIRDVAHCHGILITSYSYIRLMQDDISRYDW 640
Query: 635 AHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNS 694
++I+DEGH+++N + ++ + +T +R+IL+G+P+QNNL ELW+L +F+ P +
Sbjct: 641 HYVILDEGHKIRNPNAAVTLACKQF-RTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGT 699
Query: 695 SKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDL--PDK 752
F E F+ P G L + P+LLRR+K +V+ L PDK
Sbjct: 700 LPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDK 759
Query: 753 VEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKVMQLRKICNHPFVF 812
E+V+ C+L+ Q ++Y+ + + E +G+ + LRKICNHP +F
Sbjct: 760 NEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGEMQIFSGL-------IALRKICNHPDLF 812
Query: 813 D----EVENVINPTRENSSILY-RVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIME 867
++ + + E Y + SGK +++ +L + G RVL+F Q Q++DI+E
Sbjct: 813 SGGPKNLKGLPDDELEEDQFGYWKRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILE 872
Query: 868 DFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVII 927
FLR + Y+++DG T R ++ +N D+ F FLL+TR GGLG+NL A+ V+I
Sbjct: 873 VFLRAQKYTYLKMDGTTTIASRQPLITRYNE-DTSIFVFLLTTRVGGLGVNLTGANRVVI 931
Query: 928 FDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGK 987
+D DWNP D QA++RA RIGQK +V + RL+T ++EE I R + K + +V++ K
Sbjct: 932 YDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPK 991
>SPCP25A2.02c [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26
(contains SNF2 family DNA-dependent ATPase domain)
Length = 973
Score = 269 bits (687), Expect = 3e-71
Identities = 172/514 (33%), Positives = 270/514 (52%), Gaps = 51/514 (9%)
Query: 513 LKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLS 572
L YQ+ ++W+ LY GI+ DEMGLGKTIQ +S +S L+ ++P L++ P +
Sbjct: 277 LFRYQVTCVQWLWELYCQEAGGIIGDEMGLGKTIQIVSFLSSLHHSGKFQKPALIVCPAT 336
Query: 573 TITNWTIEFEKWAPSLRTIV----------------YKGNPNQRKALQH--TIKMGNFD- 613
+ W EF W LR +V Y+ + ++ +A + +IK+
Sbjct: 337 LMKQWVNEFHTWWAPLRVVVLHATGSGQRASREKRQYESDASESEAEESKTSIKLRGASS 396
Query: 614 ------------------VVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYT 655
+++TTY + L+ +W + ++DEGH+++N S++S +
Sbjct: 397 SFHRYAKNLVESVFTRGHILITTYAGLRIYGDLILPREWGYCVLDEGHKIRNPDSEISIS 456
Query: 656 LTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXX 715
+T NR+IL+GTP+QNNL ELW L +FV P + F F P G
Sbjct: 457 CKQI-RTVNRIILSGTPIQNNLTELWNLFDFVFPGRLGTLPVFQNQFALPINIGGYANAS 515
Query: 716 XXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKH 775
L ++ P+LLRR+K +V DLP K E+V+ CKL+ LQ++ Y+ L+
Sbjct: 516 NVQVQTAYKCACMLRDLISPYLLRRMKLDVAADLPKKSEQVLFCKLTPLQRKAYQDFLQ- 574
Query: 776 NAFFIGAGTEGATKAGIKGLNNKVMQLRKICNHPFVFDEVENVINPTRENSSILYRVSGK 835
G+ + G + + + LRKICNHP + E +++ N + SGK
Sbjct: 575 -----GSDMQKILN-GKRQMLYGIDILRKICNHPDLVTR-EYLLHKEDYNYGDPEK-SGK 626
Query: 836 FELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLR-MRDLKYMRLDGGTKAEDRTGMLK 894
+++ +L +K GHR L+F Q Q++DI+E L+ + D+ Y R+DG T R ++
Sbjct: 627 LKVIRALLTLWKKQGHRTLLFSQTRQMLDILEIGLKDLPDVHYCRMDGSTSIALRQDLVD 686
Query: 895 LFNAPDSEYF-CFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEV 953
FN +EYF FLL+TR GGLG+NL AD VI+FD DWNP D QA++RA R+GQK +V
Sbjct: 687 NFNK--NEYFDVFLLTTRVGGLGVNLTGADRVILFDPDWNPSTDAQARERAWRLGQKKDV 744
Query: 954 RILRLITTDSVEEVILERAMQKLDIDGKVIQAGK 987
+ RL+T ++EE I R + K + K+++ K
Sbjct: 745 VVYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPK 778
>At2g18760 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains
SNF2 family DNA-dependent ATPase domain)
Length = 1187
Score = 267 bits (682), Expect = 1e-70
Identities = 180/614 (29%), Positives = 287/614 (46%), Gaps = 54/614 (8%)
Query: 483 EEREKIDYYEVSHRIKETVDKQPSI----LVGGTLKEYQLKGLEWMVSLYNNHLNGILAD 538
EE E D+ + + +V + + + L +YQ G++W+ L+ GI+ D
Sbjct: 351 EEEELDDFDDADDNERSSVQLEGGLNIPECIFRKLFDYQRVGVQWLWELHCQRAGGIIGD 410
Query: 539 EMGLGKTIQSISLISYLYEIKNERQPFLVIVPLSTITNWTIEFEKWAPSLRTIVY----- 593
EMGLGKTIQ +S + L+ K + P ++I P++ + W E +KW P +
Sbjct: 411 EMGLGKTIQVLSFLGSLHFSKMYK-PSIIICPVTLLRQWRREAQKWYPDFHVEILHDSAQ 469
Query: 594 -----KG------------------------NPNQRKALQHTIKMGNFDVVLTTYEYIIK 624
KG N + +L + + +++TTYE +
Sbjct: 470 DSGHGKGQGKASESDYDSESSVDSDHEPKSKNTKKWDSLLNRVLNSESGLLITTYEQLRL 529
Query: 625 DRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALL 684
L +W + ++DEGHR++N S ++ +T +R+I+TG P+QN L ELW+L
Sbjct: 530 QGEKLLNIEWGYAVLDEGHRIRNPNSDITLVCKQL-QTVHRIIMTGAPIQNKLTELWSLF 588
Query: 685 NFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKE 744
+FV P F+ F+ P G L ++ P+LLRR+K +
Sbjct: 589 DFVFPGKLGVLPVFEAEFSVPITVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKAD 648
Query: 745 VEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKVMQLRK 804
V L K E V+ C L+ Q+ Y AF + E L + +RK
Sbjct: 649 VNAHLTKKTEHVLFCSLTVEQRSTYR------AFLASSEVEQIFDGNRNSLYG-IDVMRK 701
Query: 805 ICNHPFVFDEVENVINPTRENSSILYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMD 864
ICNHP + + + NP N SGK +++ VL +K GHRVL+F Q Q++D
Sbjct: 702 ICNHPDLLEREHSHQNPDYGNPER----SGKMKVVAEVLKVWKQQGHRVLLFSQTQQMLD 757
Query: 865 IMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADT 924
I+E FL + Y R+DG T + R ++ FN + + F F+L+T+ GGLG NL A+
Sbjct: 758 ILESFLVANEYSYRRMDGLTPVKQRMALIDEFNNSE-DMFVFVLTTKVGGLGTNLTGANR 816
Query: 925 VIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQ 984
VIIFD DWNP D+QA++RA RIGQK +V + RLIT ++EE + R + K + K+++
Sbjct: 817 VIIFDPDWNPSNDMQARERAWRIGQKKDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILK 876
Query: 985 AGKFDNKSTAXXXXXXXXXXXXGDTNKDDEYSGELDD--EELNEILARTEDEKVLFKKID 1042
+ A GD+N E S EE+N + +++ + ++
Sbjct: 877 NPQQRRFFKARDMKDLFILKDDGDSNASTETSNIFSQLAEEINIVGVQSDKKPESDTQLA 936
Query: 1043 EERVANEKREAIDL 1056
+ A E D+
Sbjct: 937 LHKTAEGSSEQTDV 950
>7300091 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1861
Score = 259 bits (663), Expect = 2e-68
Identities = 180/526 (34%), Positives = 275/526 (52%), Gaps = 39/526 (7%)
Query: 484 EREKIDYYEVSHRIKETVDKQPSILVGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLG 543
+RE +DY K + + + + L+ YQ G+ W+ L +L+GIL D+MGLG
Sbjct: 1262 DREFLDYL---FNPKSIPNYKVPVPISVELRCYQQAGINWLWFLNKYNLHGILCDDMGLG 1318
Query: 544 KTIQSISLIS----YLYEIKNERQPFLVIVPLSTITNWTIEFEKWAPS---LRTIVYKGN 596
KT+Q+I +++ + P LVI P + +W E EK+ LR + Y G
Sbjct: 1319 KTLQTICILAGDHMHRQTANLANLPSLVICPPTLTGHWVYEVEKFLDQGSVLRPLHYYGF 1378
Query: 597 PNQRKALQHTIKMGNFDVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTL 656
P R+ L+ I ++V+ +Y+ + KD + + + ++DEGH +KN ++K S +
Sbjct: 1379 PVGREKLRSDIGT-KCNLVVASYDTVRKDIDFFSGIHFNYCVLDEGHIIKNGKTKSSKAI 1437
Query: 657 THYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXX 716
K +RLIL+GTP+QNN+ ELW+L +F++P + K F + F+ P ++
Sbjct: 1438 KRL-KANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFVQRFSRPILSSRDAKSSA 1496
Query: 717 XXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQM---- 772
+ LH+ + PFLLRR+K++V KDLP K+ + + C+LS LQ +LYE
Sbjct: 1497 KEQEAGVLAMEALHRQVLPFLLRRVKEDVLKDLPPKITQDLLCELSPLQLRLYEDFSNKH 1556
Query: 773 LKHNAFFIGAGTEGATKAGIKGLNNKVMQ----LRKICNHPFVF----DEVENVINPTRE 824
LK +G + + + Q L+ +CNHP + +E+ V +
Sbjct: 1557 LKDCLDKLGDSSSASMVTENLSAKTHIFQALRYLQNVCNHPKLVLRQSEELTKVTSQLAL 1616
Query: 825 NSSILYRV--SGKFELLDRVL-------PKFKASGHRVLMFFQMTQVMDIMEDFLRMRDL 875
++S L + S K L ++L S HR L+F Q+ ++DI+E L R L
Sbjct: 1617 SNSSLDDIEHSAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLDIVEQDLLRRHL 1676
Query: 876 K---YMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDW 932
Y+RLDG A R ++ FN+ D LL+T GGLGLNL ADTVI + DW
Sbjct: 1677 PSVTYLRLDGSVPASQRQDIVNNFNS-DPSIDVLLLTTMVGGLGLNLTGADTVIFVEHDW 1735
Query: 933 NPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDI 978
NP +DLQA DRAHRIGQK V + RLIT +S+EE I+ +QK I
Sbjct: 1736 NPMKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIM--GLQKFKI 1779
>ECU09g1890 [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 883
Score = 258 bits (658), Expect = 6e-68
Identities = 158/454 (34%), Positives = 248/454 (53%), Gaps = 37/454 (8%)
Query: 375 SSINERLENDTTQRDRCYQMGRSIGNLHGHLEKDEQRRMERTAKQRLAALKSNDEEAYLK 434
S N L++ R+ + ++ N+ +K E+ MER ++ + + +
Sbjct: 128 SRTNPILKSKRIYRELYGHIKKTERNMKDRFKKAEKEEMERKKREMEEREELRQKRKFEY 187
Query: 435 LLDQTKDTRITH-LLKQTNSFLDSLAQAVR--VQQNEVRIKRGEEIPPITDEEREKIDYY 491
LL QT+ +H +LK+ L S +A R + E +G E + E +
Sbjct: 188 LLSQTE--LFSHFILKKNRCGLSSAEEAERKEIGAGEYNGMKGYEAAMLQKERLREFGAE 245
Query: 492 EVSHRIKETVD---------KQPSILVGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGL 542
+ + KE + QPSIL TLKEYQL+GL W+VSLY+ +NGILAD+MGL
Sbjct: 246 RSTKKFKEGGEVGETTTRYVPQPSILKC-TLKEYQLRGLNWLVSLYDKGINGILADDMGL 304
Query: 543 GKTIQSISLISYLYEIKNERQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKA 602
GKT+QSISL+++LYE + PFLV+ ST+ NW EF ++ PS R + G+P++RK
Sbjct: 305 GKTVQSISLLAHLYETEEVPGPFLVVTISSTLDNWAQEFARFLPSFRVCRFSGSPSERKE 364
Query: 603 LQHTIKMGNFDVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKT 662
L+ K N DVV+TTY+ + D +L K W +MI+DE +K++ S+ TL +K
Sbjct: 365 LKKRFK--NSDVVITTYQTAVSDEKMLKKIKWQYMILDEAQAIKSSMSRRWKTLLS-FKA 421
Query: 663 KNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXX 722
+NRL+LTGTP+QN++ ELWALL+F++P +F+S F +WF+ +
Sbjct: 422 RNRLLLTGTPIQNSMQELWALLHFIMPTLFDSLNEFSDWFSKEIETSAIMKKTVDEKS-- 479
Query: 723 XXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGA 782
++RLH +L+PF+LRR K +V +L K + + C LS Q+ LY+++ +
Sbjct: 480 ---LQRLHAILKPFMLRRHKSDVIHELGQKTQIDLYCDLSYRQKVLYKEITR-------- 528
Query: 783 GTEGATKAGIKGLNNKVMQLRKICNHPFVFDEVE 816
+ N +MQL+K+CNHP +F ++E
Sbjct: 529 ------SCSSMEMENLLMQLKKVCNHPDLFKKLE 556
Score = 164 bits (416), Expect = 7e-40
Identities = 82/160 (51%), Positives = 112/160 (69%), Gaps = 2/160 (1%)
Query: 833 SGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGM 892
SGK +LD +LPK KA GHR+LM+FQMT+++D++ED+L + Y+RLDG KA R +
Sbjct: 725 SGKLVVLDELLPKLKAEGHRLLMYFQMTRMIDLIEDYLVRKGYTYLRLDGSLKASARAEV 784
Query: 893 LKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNE 952
++ + A D F FLLSTRAGGLG+NL ADTV+ +D+DWNP D QA DRAHR+GQ +
Sbjct: 785 IRDWQASDK--FIFLLSTRAGGLGINLTAADTVVFYDSDWNPTADQQAMDRAHRLGQTRD 842
Query: 953 VRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKS 992
V + RLIT +VEE +LE A +K +I VI F+ ++
Sbjct: 843 VTVYRLITRGTVEEKVLESANRKDEIQKMVIHGNIFEGEN 882
>At3g54280 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 2049
Score = 255 bits (652), Expect = 3e-67
Identities = 180/590 (30%), Positives = 286/590 (47%), Gaps = 65/590 (11%)
Query: 513 LKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLI-SYLYEIKNERQ-----PFL 566
L+ YQ +G+ W+ L L+GIL D+MGLGKT+Q+ +++ S E + P +
Sbjct: 1444 LRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGSTDELDVFPSI 1503
Query: 567 VIVPLSTITNWTIEFEKWAPS--LRTIVYKGNPNQRKALQHTIKMGNFDVVLTTYEYIIK 624
++ P + + +W E EK+ L + Y G+ R +L+ + N +V++T+Y+ + K
Sbjct: 1504 IVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLRE--QFNNHNVIITSYDVVRK 1561
Query: 625 DRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALL 684
D L + W + I+DEGH +KNA+SK++ + K ++RLIL+GTP+QNN+ ELW+L
Sbjct: 1562 DVDYLTQFSWNYCILDEGHIIKNAKSKITAAVKQL-KAQHRLILSGTPIQNNIMELWSLF 1620
Query: 685 NFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKE 744
+F++P + + F + P + LHK + PFLLRR K+E
Sbjct: 1621 DFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEAGVLAMEALHKQVMPFLLRRTKEE 1680
Query: 745 VEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNA--------FFIGAGTEGATKAGIKGLN 796
V DLP+K+ + C LS +Q +LYEQ +A G+ G +
Sbjct: 1681 VLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSSAKQEISSIIKVDGSADSGNADVAPTKAS 1740
Query: 797 NKVMQ----LRKICNHPF----------VFDEVENVINPTRENSSILYRV--SGKFELLD 840
V Q L K+C+HP V ++ +IN + + L++V S K L
Sbjct: 1741 THVFQALQYLLKLCSHPLLVLGDKVTEPVASDLAAMINGCSDIITELHKVQHSPKLVALQ 1800
Query: 841 RVLPK-------------FKASGHRVLMFFQMTQVMDIMEDFL---RMRDLKYMRLDGGT 884
+L + HRVL+F Q ++DI+E L M+ + YMRLDG
Sbjct: 1801 EILEECGIGSDASSSDGTLSVGQHRVLIFAQHKALLDIIEKDLFQAHMKSVTYMRLDGSV 1860
Query: 885 KAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQD------- 937
E R ++K FN+ D LL+T GGLGLNL +ADT++ + DWNP +D
Sbjct: 1861 VPEKRFEIVKAFNS-DPTIDVLLLTTHVGGLGLNLTSADTLVFMEHDWNPMRDHQFANIE 1919
Query: 938 ----LQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKST 993
QA DRAHR+GQK V + RLI ++EE ++ K+ + VI A K+
Sbjct: 1920 LNKLWQAMDRAHRLGQKRVVNVHRLIMRGTLEEKVMSLQKFKVSVANTVINAENASMKT- 1978
Query: 994 AXXXXXXXXXXXXGDTNKDDEYSGELDDEELNEILARTEDEKVLFKKIDE 1043
+T+K S + E+ ++I + K + ++E
Sbjct: 1979 -MNTDQLLDLFASAETSKKGGGSSKKGSEDNDQIAGTGKGMKAILGNLEE 2027
>CE25717 [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 1933
Score = 254 bits (650), Expect = 5e-67
Identities = 138/344 (40%), Positives = 208/344 (60%), Gaps = 16/344 (4%)
Query: 472 KRGEEIPPITDEEREKIDYYEVSHRIKETVDKQP-SILVGGTLKEYQLKGLEWMVSLYNN 530
+R +E+ I +E + + + ++ T K P L+ G L+EYQ+ GL+WMV+LY
Sbjct: 558 ERQQELANIAEEA---LKFQPKGYTLETTQVKTPVPFLIRGQLREYQMVGLDWMVTLYEK 614
Query: 531 HLNGILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLSTITNWTIEFEKWAPSLRT 590
+LNGILADEMGLGKTIQ+ISL++++ ++ P L++VP S I NW +EF+KW P+L+
Sbjct: 615 NLNGILADEMGLGKTIQTISLLAHMACSESIWGPHLIVVPTSVILNWEMEFKKWCPALKI 674
Query: 591 IVYKGNPNQR-KALQHTIKMGNFDVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQ 649
+ Y G +R + + +K F V +T+Y+ + +D + W ++I+DE +KN +
Sbjct: 675 LTYFGTAKERAEKRKGWMKPNCFHVCITSYKTVTQDIRAFKQRAWQYLILDEAQNIKNWK 734
Query: 650 SKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANT 709
S+ L + + + RL+LTGTPLQN+L ELW+L++F++P IF+S F +WF+ P
Sbjct: 735 SQRWQALLN-VRARRRLLLTGTPLQNSLMELWSLMHFLMPTIFSSHDDFKDWFSNPLTG- 792
Query: 710 GXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLY 769
+I RLHKVLRPF+LRRLKKEVEK LP+K E +V C LS Q+ LY
Sbjct: 793 ----MMEGNMEFNAPLIGRLHKVLRPFILRRLKKEVEKQLPEKTEHIVNCSLSKRQRYLY 848
Query: 770 EQMLKHNAFFIGAGTEGATKAGIKGLNNKVMQLRKICNHPFVFD 813
+ + + E + + N VMQLRK CNHP +F+
Sbjct: 849 DDFMSRR-----STKENLKSGNMMSVLNIVMQLRKCCNHPNLFE 887
Score = 144 bits (362), Expect = 1e-33
Identities = 96/294 (32%), Positives = 149/294 (50%), Gaps = 5/294 (1%)
Query: 834 GKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGML 893
GK + L +L + HR L+F QM++++D+++ FL +Y RLDG T E R M+
Sbjct: 1239 GKLQTLAVLLRQLYLYKHRCLIFTQMSKMLDVLQTFLSHHGYQYFRLDGTTGVEQRQAMM 1298
Query: 894 KLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEV 953
+ FNA D + FCF+LSTR+GG+G+NL ADTVI +D+DWNP D QAQDR HRIGQ V
Sbjct: 1299 ERFNA-DPKVFCFILSTRSGGVGVNLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRNV 1357
Query: 954 RILRLITTDSVEEVILERAMQKLDIDGKVI-QAGKFDNKSTAXXXXXXXXXXXXGDTNKD 1012
I RLI+ ++EE IL +A QK + I +AG +
Sbjct: 1358 SIYRLISERTIEENILRKATQKRRLGELAIDEAGFTPEFFKQSDSIRDLFDGENVEVTAV 1417
Query: 1013 DEYSGELDDEELNEILARTEDEKVLFKKIDEERVANEKREAIDLGLRKPLPRLITKEELP 1072
+ + + ++E+ +A+ EDE + AN D P+ L EE
Sbjct: 1418 ADVATTMSEKEMEVAMAKCEDEADVNAAKIAVAEANVDNAEFDEKSLPPMSNLQGDEEAD 1477
Query: 1073 SVFTEDITDHLNVEPAAIGRIRERKRVYYDDGLTEEQWL---QAVDNDEDLDET 1123
+ E I +E AI + + + +++ E + L + + D++L++T
Sbjct: 1478 EKYMELIQQLKPIERYAINFLETQYKPEFEEECKEAEALIDQKREEWDKNLNDT 1531
>ECU09g0410 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26
(contains SNF2 family DNA-dependent ATPase domain)
Length = 695
Score = 254 bits (649), Expect = 6e-67
Identities = 170/533 (31%), Positives = 274/533 (50%), Gaps = 56/533 (10%)
Query: 488 IDYYEVSHRIKETVDKQPSILVGG----TLKEYQLKGLEWMVSLYNNHLNGILADEMGLG 543
I+ E S IK+ + V G +L YQ G+ WM+ LY + G+LAD+MGLG
Sbjct: 122 IEEDEFSEHIKKEGKECEGFSVPGFLWSSLFPYQQDGVRWMLRLYRDEKGGVLADDMGLG 181
Query: 544 KTIQSISLISYLYEIKNERQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKAL 603
KTIQ I + L + + L++ P + ++ W E++++ P +R ++ G PN+
Sbjct: 182 KTIQVIVFLGALLHSRVVSKA-LILCPATIVSQWMDEWKRFYPFVR--IFFGFPNEDCE- 237
Query: 604 QHTIKMGNFDVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTK 663
V L +YE K + + W +I+DEGHR+KN ++++ ++ +++
Sbjct: 238 ---------GVYLMSYE---KFKAGVKNFLWDVLILDEGHRIKNKNAQITLSVKKA-RSR 284
Query: 664 NRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXX 723
R +L+GTP+QNNL ELW++ +FV P + S +F+E F G
Sbjct: 285 GRFVLSGTPIQNNLGELWSIFDFVNPGLLGSHTSFNEEFEEVIRRGGYRNASNLQVEKAY 344
Query: 724 XVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAG 783
L ++ P++LRR K +V LP K +K+V C L+ Q +LY ++L+
Sbjct: 345 RHSLMLRSLIEPYILRRTKSQVSHKLPSKEDKIVFCSLTPAQIELYNRVLESKHIM---- 400
Query: 784 TEGATKAGIKGLNNKVMQLRKICNHPFVF--------------------DEVENVINPTR 823
G L + + LRK+CNHP + E E + P
Sbjct: 401 ---KVLTGKANLLSGISMLRKVCNHPRLLFPRKLGVSEDCEEEASDEKNGEDEALELPGA 457
Query: 824 ENSSILYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGG 883
+ S L S K ++L +L K+++ G++VL+F Q +++DI+E +R Y+R+DG
Sbjct: 458 DVSYDLVSSSCKIKILVDLLKKWRSEGNKVLVFSQTIRMLDIIERCVRK--YTYLRMDGR 515
Query: 884 TKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDR 943
T R G++ FN D + F FLL+T+ GGLGLNL A ++I+D DWNP D QA++R
Sbjct: 516 TPTSSRPGLVDRFNE-DEDVFLFLLTTKVGGLGLNLTGASRIVIYDPDWNPSTDTQAKER 574
Query: 944 AHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVI----QAGKFDNKS 992
A R GQK V I R + D++EE + ++ + K D+ GK + + +F NKS
Sbjct: 575 AWRYGQKKGVEIYRFVCKDTIEEKVYQKQIFK-DLLGKKVLSNPRLSRFFNKS 626
>YDR334w [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 1514
Score = 254 bits (648), Expect = 8e-67
Identities = 163/484 (33%), Positives = 252/484 (51%), Gaps = 44/484 (9%)
Query: 407 KDEQRRMERTAKQRLAALKSNDEEAYLKL-LDQTKDTRITHLLKQTNSFLDSLAQAVRVQ 465
++++ ++T L+AL EE+ L LD ++D + ++S + +V
Sbjct: 588 ENDRESDDKTPSVGLSALFGKGEESDGDLDLDDSEDFTVN-----SSSVEGEELEKDQVD 642
Query: 466 QNEVRIKRGEEIPPITDEEREKIDYYEVSHRIK------ETVDKQPSILVGGTLKEYQLK 519
+ +R + +E R+ I E K VD L+ G L+ YQ +
Sbjct: 643 NSAATFERAGDFVHTQNENRDDIKDVEEDAETKVQEEQLSVVDVPVPSLLRGNLRTYQKQ 702
Query: 520 GLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLSTITNWTI 579
GL W+ SLYNNH NGILADEMGLGKTIQ+ISL++YL K P L++VP S + NW +
Sbjct: 703 GLNWLASLYNNHTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWEM 762
Query: 580 EFEKWAPSLRTIVYKGNPNQRKALQH-TIKMGNFDVVLTTYEYIIKDRPLLAKHDWAHMI 638
EF+++AP + + Y G+P QRK + K F V + +Y+ +++D+ + W +M+
Sbjct: 763 EFKRFAPGFKVLTYYGSPQQRKEKRKGWNKPDAFHVCIVSYQLVVQDQHSFKRKRWQYMV 822
Query: 639 IDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKI------- 691
+DE H +KN +S L + + T+ RL+LTGTPLQNNL ELW+LL F++P+
Sbjct: 823 LDEAHNIKNFRSTRWQALLN-FNTQRRLLLTGTPLQNNLAELWSLLYFLMPQTVIDGKKV 881
Query: 692 --FNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDL 749
F F +WF P + +LH+VLRP+LLRRLK +VEK +
Sbjct: 882 SGFADLDAFQQWFGRPVDKIIETGQNFGQDKETKKTVAKLHQVLRPYLLRRLKADVEKQM 941
Query: 750 PDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAG-IKGLNNKVMQLRKICNH 808
P K E +V CKLS Q+ LY+ F A T+ +G + N +MQLRK+CNH
Sbjct: 942 PAKYEHIVYCKLSKRQRFLYDD------FMSRAQTKATLASGNFMSIVNCLMQLRKVCNH 995
Query: 809 PFVFDEVENVINPTRENSSILYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMED 868
P +F+ + P + + + V+ ++ ++R L K +F + QV + D
Sbjct: 996 PNLFE-----VRPILTSFVLEHCVASDYKDVERTLLK---------LFKKNNQVNRVDLD 1041
Query: 869 FLRM 872
FL +
Sbjct: 1042 FLNL 1045
Score = 157 bits (397), Expect = 1e-37
Identities = 96/255 (37%), Positives = 134/255 (51%), Gaps = 32/255 (12%)
Query: 825 NSSILYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGT 884
+ S+L GK + L +L + K +GHR L+F QMT+V+D++E FL YMRLDG T
Sbjct: 1237 DKSLLQYDCGKLQKLAILLQQLKDNGHRALIFTQMTKVLDVLEQFLNYHGYLYMRLDGAT 1296
Query: 885 KAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRA 944
K EDR + + FN DS F+LS+R+GGLG+NL ADTVI +D+DWNP D Q QDR
Sbjct: 1297 KIEDRQILTERFNT-DSRITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRC 1355
Query: 945 HRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKSTAXXXXXXXXXX 1004
HRIGQ +V I R ++ ++E IL++A QK +D VIQ G F T
Sbjct: 1356 HRIGQTRDVHIYRFVSEHTIESNILKKANQKRQLDNVVIQEGDF----TTDYFSKLSVRD 1411
Query: 1005 XXGDTNKDDEYSGE-----------LDDEELNEILARTEDEKVL---------------- 1037
G ++ G+ D +L +LA+ EDE +
Sbjct: 1412 LLGSELPENASGGDKPLIADADVAAKDPRQLERLLAQAEDEDDVKAANLAMREVEIDNDD 1471
Query: 1038 FKKIDEERVANEKRE 1052
F + E++ ANE+ E
Sbjct: 1472 FDESTEKKAANEEEE 1486
>At3g12810 [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 1048
Score = 253 bits (646), Expect = 1e-66
Identities = 133/308 (43%), Positives = 193/308 (62%), Gaps = 14/308 (4%)
Query: 508 LVGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNERQPFLV 567
L+ +L+EYQ GL+W+V++Y LNGILADEMGLGKTI +I+L+++L K P L+
Sbjct: 116 LLKHSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACDKGIWGPHLI 175
Query: 568 IVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRK-ALQHTIKMGNFDVVLTTYEYIIKDR 626
+VP S + NW EF KW P+ + + Y G+ +RK Q +K+ +F V +TTY +I+D
Sbjct: 176 VVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQGWMKLNSFHVCITTYRLVIQDS 235
Query: 627 PLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNF 686
+ + W ++I+DE H +KN +S+ TL + + +K R++LTGTPLQN+L ELW+L++F
Sbjct: 236 KMFKRKKWKYLILDEAHLIKNWKSQRWQTLLN-FNSKRRILLTGTPLQNDLMELWSLMHF 294
Query: 687 VLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVE 746
++P +F S + F +WF P A VI RLH VLRPFLLRRLK++VE
Sbjct: 295 LMPHVFQSHQEFKDWFCNPIAG-----MVEGQEKINKEVIDRLHNVLRPFLLRRLKRDVE 349
Query: 747 KDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGA-TKAGIKGLNNKVMQLRKI 805
K LP K E V+ C+LS Q+ LYE F T+ T G+ + +MQLRK+
Sbjct: 350 KQLPSKHEHVIFCRLSKRQRNLYED------FIASTETQATLTSGSFFGMISIIMQLRKV 403
Query: 806 CNHPFVFD 813
CNHP +F+
Sbjct: 404 CNHPDLFE 411
Score = 166 bits (420), Expect = 2e-40
Identities = 105/326 (32%), Positives = 172/326 (52%), Gaps = 17/326 (5%)
Query: 834 GKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGML 893
GK + L +L K K GHR L+F QMT+++D++E F+ + YMRLDG T E+R ++
Sbjct: 660 GKLQELAMLLRKLKFGGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDGSTPPEERQTLM 719
Query: 894 KLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEV 953
+ FN + + F F+LSTR+GG+G+NL ADTVI +D+DWNP D QAQDR HRIGQ EV
Sbjct: 720 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 778
Query: 954 RILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKSTAXXXXXXXXXXXXGDTNKDD 1013
I RLI+ ++EE IL++A QK +D VIQ G+++ + T KD+
Sbjct: 779 HIYRLISESTIEENILKKANQKRVLDNLVIQNGEYNTEFFKKLDPMELFSGHKALTTKDE 838
Query: 1014 EYSGE-------LDDEELNEILARTEDEK--VLFKKIDEERVANEKREAIDLGLRKPLPR 1064
+ + + L + ++ L + EDE + K++++E A + +E + + +P
Sbjct: 839 KETSKHCGADIPLSNADVEAALKQAEDEADYMALKRVEQEE-AVDNQEFTEEPVERPEDD 897
Query: 1065 LITKEELPSVFTEDITDHLNVEPAAIGRIRERKRVYYDDGLTEEQWLQAVDNDEDLDETI 1124
+ E+ + ++ D V A G +E + + D + +E+ + + ED + +
Sbjct: 898 ELVNED--DIKADEPADQGLV---AAGPAKEEMSLLHSD-IRDERAVITTSSQEDDTDVL 951
Query: 1125 XXXXXXXXXXXXXXLGLESLENSVEP 1150
+ S EN + P
Sbjct: 952 DDVKQMAAAAADAGQAISSFENQLRP 977
>YGL150c [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 1489
Score = 253 bits (645), Expect = 2e-66
Identities = 153/416 (36%), Positives = 238/416 (56%), Gaps = 36/416 (8%)
Query: 421 LAALKSNDEEAYLKLLDQTKDTRITHLLKQTNSFLDSLAQA-VRVQQNEVRIKRGEEIPP 479
++AL N + + D D ++ L+ + ++LA+ + +Q + EE
Sbjct: 622 ISALAPNKNDFHAIDFDNENDEQLR--LRAAENASNALAETRAKAKQFDDHANAHEE--- 676
Query: 480 ITDEEREKIDYYEVSHRIKETVDKQPSILVGGTLKEYQLKGLEWMVSLYNNHLNGILADE 539
+EE +++++ + + T++ QP IL TLKEYQLKGL W+ +LY+ +NGILADE
Sbjct: 677 --EEEEDELNFQNPTSLGEITIE-QPKILAC-TLKEYQLKGLNWLANLYDQGINGILADE 732
Query: 540 MGLGKTIQSISLISYLYEIKNERQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQ 599
MGLGKT+QSIS++++L E N PFLV+ P ST+ NW E K+ P + + Y GN N
Sbjct: 733 MGLGKTVQSISVLAHLAENHNIWGPFLVVTPASTLHNWVNEISKFLPQFKILPYWGNAND 792
Query: 600 RKALQ--------HTIKMGNFDVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSK 651
RK L+ K F V++T+Y+ ++ D L K W +MI+DE +K++QS
Sbjct: 793 RKVLRKFWDRKNLRYNKNAPFHVMVTSYQMVVTDANYLQKMKWQYMILDEAQAIKSSQSS 852
Query: 652 LSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGX 711
L ++ +NRL+LTGTP+QN++ ELWALL+F++P +F+S F+EWF+ +
Sbjct: 853 RWKNLLSFH-CRNRLLLTGTPIQNSMQELWALLHFIMPSLFDSHDEFNEWFSKDIES--- 908
Query: 712 XXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQ 771
+RRLH +L+PF+LRR+KK V+ +L DK+E V C L+ Q +LY Q
Sbjct: 909 --HAEANTKLNQQQLRRLHMILKPFMLRRVKKNVQSELGDKIEIDVLCDLTQRQAKLY-Q 965
Query: 772 MLK----------HNAFFIGAGTEGATKAGI-KGLNNKVMQLRKICNHPFVFDEVE 816
+LK NA + + A+ +G + L N VMQ RK+CNHP +F+ +
Sbjct: 966 VLKSQISTNYDAIENAATNDSTSNSASNSGSDQNLINAVMQFRKVCNHPDLFERAD 1021
Score = 154 bits (390), Expect = 7e-37
Identities = 78/160 (48%), Positives = 109/160 (67%), Gaps = 2/160 (1%)
Query: 833 SGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGM 892
S K LD +L K K+ GHRVL++FQMT++MD+ME++L R ++RLDG +K EDR +
Sbjct: 1298 SAKLRKLDELLVKLKSEGHRVLIYFQMTKMMDLMEEYLTYRQYNHIRLDGSSKLEDRRDL 1357
Query: 893 LKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNE 952
+ + + E F FLLSTRAGGLG+NL ADTVI +D+DWNP D QA DRAHR+GQ +
Sbjct: 1358 VHDWQT-NPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQ 1416
Query: 953 VRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKS 992
V + RL+ ++EE + +RA QK + +V+ GK K+
Sbjct: 1417 VTVYRLLVRGTIEERMRDRAKQKEQVQ-QVVMEGKTQEKN 1455
>SPCC1620.14c [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 430
Score = 251 bits (640), Expect = 7e-66
Identities = 170/442 (38%), Positives = 224/442 (50%), Gaps = 85/442 (19%)
Query: 899 PDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRL 958
P S+ + F+LSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQ EVRILRL
Sbjct: 2 PKSDVYIFMLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRILRL 61
Query: 959 ITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKSTAXXXXXXXXXXXXGDTNKDDEYS-G 1017
IT S+EE IL RA KLD+DGKVIQAGKFDNKST D + D + + G
Sbjct: 62 ITEKSIEENILSRAQYKLDLDGKVIQAGKFDNKSTPEEREAFLRSLLEHDGDDDHDLTYG 121
Query: 1018 ELDDEELNEILARTEDEKVLFKKIDEERVANEKREAIDLGLRKPLPRLITKEELPSVFTE 1077
EL D+ELNE+++RT++E VLFKK+D+ER A + G KPL RL+T ELP +
Sbjct: 122 ELQDDELNELISRTDEELVLFKKLDKERAATD-----IYGKGKPLERLLTVNELPDFYKV 176
Query: 1078 DITDHLNVEPAAIGRIRERKRVYYDDGLTEEQWLQAVDNDEDL-DETIXXXXXXXXXXXX 1136
++ AV + +L D+ +
Sbjct: 177 EVDSF------------------------------AVQSSSELEDQYLERKRRRRNSISY 206
Query: 1137 XXLGLESLENSVEPEESSSTSNTVISAEQAVTPARENGRTRSRRKVVATPSTTPXXXXXX 1196
L L+ L NTV + P R+ GR R + ++ ST
Sbjct: 207 TELTLDEL-------------NTVDDPSSTLMP-RKRGRPRKKTNSGSSLST-------- 244
Query: 1197 XXXXXAKPVKQDAGPXXXXXXXXXXXXXDDAPTKRKEEPPLKDKV--EALLALLRELTDP 1254
P+ Q++ A + RK P K K + + L +
Sbjct: 245 -------PLSQESSL---------------ARSGRKNTPSYKQKALRRYCMEIFERLYNL 282
Query: 1255 TDEHSR--TFIFERLPSRKEYPDYYKVIEKPVALETITKKLNKKQYQSINEVKSDLETMF 1312
E R +F P+RK YPDYY +I++P+AL I + + +Y + E+ +D MF
Sbjct: 283 QSEDGRFVNGLFLYPPNRKLYPDYYIIIKRPIALGKIKRNIKNDRYGDVGELIADFMLMF 342
Query: 1313 NNAKLYNEEGSWVFNDAEALEE 1334
NNA YNEE S V+ DA+ +E+
Sbjct: 343 NNAYTYNEEHSIVYEDAKLMEK 364
>SPAC25A8.01c [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 922
Score = 251 bits (640), Expect = 7e-66
Identities = 172/528 (32%), Positives = 263/528 (49%), Gaps = 70/528 (13%)
Query: 513 LKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLS 572
L++YQ+ G+ W+ LY L GILADEMGLGKT Q+I+ S L + KN P LVI P S
Sbjct: 387 LQDYQIIGINWLYLLYELKLAGILADEMGLGKTCQTIAFFSLLMD-KNINGPHLVIAPAS 445
Query: 573 TITNWTIEFEKWAPSLRTIVYKGNPNQRKALQHTIKMG--NFDVVLTTYEYII---KDRP 627
T+ NW EF K+ P L+ +Y G+ +R+ ++ I +++V+LTTY DR
Sbjct: 446 TMENWLREFAKFCPKLKIELYYGSQVEREEIRERINSNKDSYNVMLTTYRLAATSKADRL 505
Query: 628 LLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFV 687
L + + DEGH +KN S+ Y R++LTGTPLQNNL EL +LL F+
Sbjct: 506 FLRNQKFNVCVYDEGHYLKNRASE-RYRHLMSIPADFRVLLTGTPLQNNLKELISLLAFI 564
Query: 688 LPKIFN-SSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVE 746
LP +F+ K+ D F + + R ++ PF+LRR K +V
Sbjct: 565 LPHVFDYGLKSLDVIFTMKKSPESDFERALLSEQR----VSRAKMMMAPFVLRRKKSQVL 620
Query: 747 KDLPDKVEKVVKCKLSSLQQQLYE---------QMLKHNAFFIGAGTEG--ATKAGIKGL 795
LP K + C+ S +++ Y+ +L N T A K G
Sbjct: 621 DALPKKTRIIEFCEFSEEERRRYDDFASKQSVNSLLDENVMKTNLDTNANLAKKKSTAGF 680
Query: 796 NNKVMQLRKICNHP-------------------------------FVFDEVENVINPTRE 824
++QLRK+ +HP ++F++++ + +
Sbjct: 681 --VLVQLRKLADHPMLFRIHYKDDILRQMAKAIMNEPQYKKANELYIFEDMQYMSDIELH 738
Query: 825 NSSILYRVSGKFELLD-------------RVLPKFKASGHRVLMFFQMTQVMDIMEDFLR 871
N + F+L D ++L +G RV++F Q TQV+DI++ ++
Sbjct: 739 NLCCKFPSINSFQLKDEPWMDATKVRKLKKLLTNAVENGDRVVLFSQFTQVLDILQLVMK 798
Query: 872 MRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTD 931
+LK++R DG T+ + R ++ F A D FLLST+AGG G+NL A+ VI++D
Sbjct: 799 SLNLKFLRFDGSTQVDFRQDLIDQFYA-DESINVFLLSTKAGGFGINLACANMVILYDVS 857
Query: 932 WNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDID 979
+NP DLQA+DRAHR+GQK EV + + + D++EE I A K+ +D
Sbjct: 858 FNPFDDLQAEDRAHRVGQKKEVTVYKFVVKDTIEEHIQRLANAKIALD 905
>Hs5730067 [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 2971
Score = 249 bits (637), Expect = 2e-65
Identities = 127/308 (41%), Positives = 191/308 (61%), Gaps = 12/308 (3%)
Query: 507 ILVGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNERQPFL 566
+L+ G L+EYQ GL+W+V++Y LNGILADEMGLGKTIQ+ISL+++L K P L
Sbjct: 415 LLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNWGPHL 474
Query: 567 VIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRK-ALQHTIKMGNFDVVLTTYEYIIKD 625
+IVP S + NW +E ++W PS + + Y G +RK Q K F V +T+Y+ +++D
Sbjct: 475 IIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTKPNAFHVCITSYKLVLQD 534
Query: 626 RPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLN 685
+ +W ++I+DE +KN +S+ +L + + ++ RL+LTGTPLQN+L ELW+L++
Sbjct: 535 HQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLN-FNSQRRLLLTGTPLQNSLMELWSLMH 593
Query: 686 FVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEV 745
F++P +F S + F EWF+ P +++RLHKVLRPFLLRR+K +V
Sbjct: 594 FLMPHVFQSHREFKEWFSNPLTG-----MIEGSQEYNEGLVKRLHKVLRPFLLRRVKVDV 648
Query: 746 EKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKVMQLRKI 805
EK +P K E V++C+LS Q+ LY+ + E + N +MQLRK+
Sbjct: 649 EKQMPKKYEHVIRCRLSKRQRCLYDDFMAQT-----TTKETLATGHFMSVINILMQLRKV 703
Query: 806 CNHPFVFD 813
CNHP +FD
Sbjct: 704 CNHPNLFD 711
Score = 160 bits (405), Expect = 1e-38
Identities = 88/211 (41%), Positives = 122/211 (57%), Gaps = 10/211 (4%)
Query: 834 GKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGML 893
GK + L +L + KA GHRVL+F QMT+++D++E FL Y+RLDG T+ E R ++
Sbjct: 1784 GKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALM 1843
Query: 894 KLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEV 953
+ FNA D FCF+LSTR+GG+G+NL ADTV+ +D+DWNP D QAQDR HRIGQ +V
Sbjct: 1844 ERFNA-DKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 1902
Query: 954 RILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKSTAXXXXXXXXXXXXGDTNKDD 1013
I RLI+ +VEE IL++A QK + I+ G F + +
Sbjct: 1903 HIYRLISERTVEENILKKANQKRMLGDMAIEGGNFTTAYFKQQTIRELFDMPLEEPSSSS 1962
Query: 1014 EYSGELDDEE---------LNEILARTEDEK 1035
S ++EE L + L R EDE+
Sbjct: 1963 VPSAPEEEEETVASKQTHILEQALCRAEDEE 1993
>Hs17454125 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1849
Score = 249 bits (636), Expect = 2e-65
Identities = 174/523 (33%), Positives = 264/523 (50%), Gaps = 53/523 (10%)
Query: 509 VGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLIS---------YLYEIK 559
+ L++YQ G+ W+ L L+GIL D+MGLGKT+QSI +++ Y
Sbjct: 1262 INAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQEYARSKL 1321
Query: 560 NERQPF--LVIVPLSTITNWTIEFEKWAPS--LRTIVYKGNPNQRKALQHTIKMGNFDVV 615
E P LV+ P + +W E K+ L + Y G P +R LQH +K N ++
Sbjct: 1322 AECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKRHN--LI 1379
Query: 616 LTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKN-RLILTGTPLQ 674
+ +Y+ + D + + I+DEGH +KN ++KLS + T N R+IL+GTP+Q
Sbjct: 1380 VASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQL--TANYRIILSGTPIQ 1437
Query: 675 NNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLR 734
NN+ ELW+L +F++P + + F + P + + LH+ +
Sbjct: 1438 NNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMDALHRQVL 1497
Query: 735 PFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNA-----FFIGAGT--EGA 787
PFLLRR+K++V +DLP K+ + C LS LQ QLYE K A + + T E
Sbjct: 1498 PFLLRRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAKCDVDETVSSATLSEET 1557
Query: 788 TKAGIKGLNN---KVMQLRKICNHPFV-----FDEVENVINPTRENSSILYRV--SGKFE 837
K +K + + LRK+CNHP + E + +S L+ + + K
Sbjct: 1558 EKPKLKATGHVFQALQYLRKLCNHPALVLTPQHPEFKTTAEKLAVQNSSLHDIQHAPKLS 1617
Query: 838 LLDRVL--------------PKFKASGHRVLMFFQMTQVMDIME-DFLR--MRDLKYMRL 880
L ++L + + HR+L+F Q+ ++DI+E D L+ + + Y+RL
Sbjct: 1618 ALKQLLLDCGLGNGSTSESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRL 1677
Query: 881 DGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQA 940
DG R ++ FN D LL+T GGLGLNL ADTV+ + DWNP +DLQA
Sbjct: 1678 DGSIPPGQRHSIVSRFN-NDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQA 1736
Query: 941 QDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVI 983
DRAHRIGQK V + RLIT ++EE I+ K++I VI
Sbjct: 1737 MDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVI 1779
>CE11028 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains
SNF2 family DNA-dependent ATPase domain)
Length = 1785
Score = 245 bits (625), Expect = 4e-64
Identities = 177/588 (30%), Positives = 284/588 (48%), Gaps = 55/588 (9%)
Query: 509 VGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNER------ 562
V L ++Q +G+EW+ ++ GILADEMGLGKTIQS+ + + E
Sbjct: 190 VWNKLHKFQQEGVEWLQKKTDHRSGGILADEMGLGKTIQSVVFLRSIQETARTHYKTTGL 249
Query: 563 QPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQ-----------RKALQHTIKMGN 611
L++ +S I W E +W P R + + + RK + + +
Sbjct: 250 DTALIVCHVSIIAQWIKELNQWFPKARVFLLHSHCSTGRQEDYVGSIFRKLQRRRKEYPD 309
Query: 612 FDVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGT 671
++LTTY K + + KH W +I+DEGH ++N +K S + T+ R ILTGT
Sbjct: 310 GAIILTTYSLFTKLKKPIVKHLWQVVILDEGHYIRNENTKCSIAMRKLMTTQ-RFILTGT 368
Query: 672 PLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXX-XXXXXXXXVIRRLH 730
P QN L E W L++FV P + S TF F T N G + LH
Sbjct: 369 PFQNRLSEFWKLVDFVHPGRLSDSATFHRNF-THIINAGANLNCSPEAAAKAYECLVALH 427
Query: 731 KVLRPFLLRRLKKEVEK--DLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGAT 788
++P +LRRL+++ ++ LP+K E V+ C+LS Q++LY M N+ + E
Sbjct: 428 IAVKPLILRRLQEDHKEVLQLPEKQEIVLSCELSKRQRRLY--MEYGNSHQVNEIIERRL 485
Query: 789 KAGIKGLNNKVMQLRKICNHPFVFDEVENVINPTRENSSILYRVSGKFELLDRVLPK-FK 847
KA + G+N+ L ICNHP ++ ++P + + SGK E+ ++ FK
Sbjct: 486 KAFV-GINH----LTNICNHPGIYRS----LSPASPKFGSI-KDSGKVEMTFKLFDDWFK 535
Query: 848 ASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFL 907
+ +RV++F Q V+ +ME FL + +K + L G A R ++K F D FL
Sbjct: 536 SPTNRVILFTQRRTVITMMEYFLAEKGIKCVSLTGADSAAARPKIIKKFE-DDVSIKVFL 594
Query: 908 LSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEV 967
++TRAGGLGLNL A+ VIIFD DWNP D QA++R +R+GQ N+V I RL++ ++E++
Sbjct: 595 MTTRAGGLGLNLTCANKVIIFDPDWNPQADNQAKNRIYRMGQTNDVAIYRLVSNGTIEDL 654
Query: 968 ILERAMQKLDIDGKVIQAGKFD-------------------NKSTAXXXXXXXXXXXXGD 1008
+ +QK ++ +++ + D S
Sbjct: 655 KFFKQVQKENLAARLLHNAEIDQFVPNNTLADLFRLKPKGLEGSEIGVYLDGEIAREGSK 714
Query: 1009 TNKDDEYSGELDDEELNEILARTEDEKVLFKKIDEERVANEKREAIDL 1056
K D+ + + + LA ED+K+L D++++ + +I L
Sbjct: 715 KQKRDKVEKKAAKKRMKNKLAGFEDKKLLLSLFDDDKLVAMREHSISL 762
Score = 102 bits (254), Expect = 4e-21
Identities = 104/417 (24%), Positives = 177/417 (41%), Gaps = 47/417 (11%)
Query: 603 LQHTIKMGNFDVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKT 662
L+ T K+ V+LTT+ K + H W + +D+G Q + KT
Sbjct: 1147 LKETKKIPFGAVLLTTFAEFGKHEKAIVDHQWQLVYLDQGLFEMTRQMRNQIEGMKKLKT 1206
Query: 663 KNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXX 722
NR I T T +++ L ELW ++FV P + KTF F
Sbjct: 1207 PNRFIFTDTSVRDRLEELWWNVDFVFPGRLSDYKTFQTNFQNVIEIGCRLDATPEEASTA 1266
Query: 723 XXVIRRLHKVLRPFLLRRL--------------KKEVEKDLPDKVEKVVK---------- 758
I LH L+P +L RL KKEVE KV VK
Sbjct: 1267 YECIVALHVALKPLILSRLIKNPNDWFCRREISKKEVEH---IKVRIFVKQYFEQTLFFQ 1323
Query: 759 ---CKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKVMQLRKICNHPFVFDEV 815
C LS Q++ + + + A G+K +L IC+HP +
Sbjct: 1324 DIICPLSKRQRRCLKIYKRSDEVQGILRQSSAACVGLK-------KLTDICDHPGIH--- 1373
Query: 816 ENVINPTRENSSILYRVSGKFELLDRVLPKFKAS-GHRVLMFFQMTQVMDIMEDFLRMRD 874
+ V T++ SI SGK ++ ++L + + G +V++F Q QV ++E F++ +
Sbjct: 1374 KGVTPETKKFGSI--EDSGKVRIVFQLLDMWLGTPGAKVVIFTQRRQVAVMLEHFMKQKR 1431
Query: 875 LKYMRLDGGTKAEDRTGMLKLF-NAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWN 933
+ Y A DR ++ F N D + L + LG+ L+ A+ VIIFD +WN
Sbjct: 1432 IAYCSFLKAKNAYDRENVVNYFENTTDVQ--ILLAPSIMFKLGMQLKKANKVIIFDPEWN 1489
Query: 934 PHQDLQ-AQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFD 989
P D++ ++ + + +V ++RL++ +VE+ + + + + +++ KF+
Sbjct: 1490 PDSDVKHTREMSFLTKKVEDVTVVRLVSEGTVEDSSYFKKLWESGLASRLLSDPKFE 1546
>At3g57300 [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 1496
Score = 243 bits (619), Expect = 2e-63
Identities = 133/333 (39%), Positives = 194/333 (57%), Gaps = 25/333 (7%)
Query: 508 LVGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNERQPFLV 567
L GTLKEYQ+KGL+W+V+ Y LNGILADEMGLGKTIQ+++ +++L E KN PFLV
Sbjct: 581 LFKGTLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLV 640
Query: 568 IVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKALQHTI-------KMGNFDVVLTTYE 620
+ P S + NW E ++ P L+T+ Y G +R L+ I + F +++T+Y+
Sbjct: 641 VAPASVLNNWADEISRFCPDLKTLPYWGGLQERTILRKNINPKRMYRRDAGFHILITSYQ 700
Query: 621 YIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPEL 680
++ D + W +M++DE +K++ S TL + +NRL+LTGTP+QNN+ EL
Sbjct: 701 LLVTDEKYFRRVKWQYMVLDEAQAIKSSSSIRWKTLLS-FNCRNRLLLTGTPIQNNMAEL 759
Query: 681 WALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRR 740
WALL+F++P +F++ F+EWF + G + RLH +L+PF+LRR
Sbjct: 760 WALLHFIMPMLFDNHDQFNEWF-----SKGIENHAEHGGTLNEHQLNRLHAILKPFMLRR 814
Query: 741 LKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHN---AFFIGAGTEGATKAGIKGLNN 797
+KK+V +L K E V CKLSS QQ Y Q +K+ A + T + L N
Sbjct: 815 VKKDVVSELTTKTEVTVHCKLSSRQQAFY-QAIKNKISLAELFDSNRGQFTDKKVLNLMN 873
Query: 798 KVMQLRKICNHPFVFDEVENVINPTRENSSILY 830
V+QLRK+CNHP +F+ E SS LY
Sbjct: 874 IVIQLRKVCNHPELFER--------NEGSSYLY 898
Score = 142 bits (358), Expect = 4e-33
Identities = 75/154 (48%), Positives = 102/154 (65%), Gaps = 10/154 (6%)
Query: 833 SGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGM 892
SGK + LD +L + +A HRVL+F QMT++++I+ED++ R KY+RLDG + DR M
Sbjct: 1205 SGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRDM 1264
Query: 893 LKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNE 952
++ F S+ F FLLSTRAGGLG+NL ADTVI +++DWNP DLQA DRAHR+GQ +
Sbjct: 1265 VRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1323
Query: 953 VRILRLITTDSVEEVILERAMQKLDIDGKVIQAG 986
++VEE IL RA QK + V+ G
Sbjct: 1324 ---------ETVEEKILHRASQKNTVQQLVMTGG 1348
>At1g03750 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26
(contains SNF2 family DNA-dependent ATPase domain)
Length = 874
Score = 241 bits (615), Expect = 6e-63
Identities = 173/550 (31%), Positives = 277/550 (49%), Gaps = 76/550 (13%)
Query: 513 LKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYE----------IKNER 562
L E+Q +G+++M +LY N+ GIL D+MGLGKTIQ+I+ ++ +Y +++++
Sbjct: 151 LLEHQREGVKFMYNLYKNNHGGILGDDMGLGKTIQTIAFLAAVYGKDGDAGESCLLESDK 210
Query: 563 QPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKALQHTIKMGNFDVVLTTYEYI 622
P L+I P S I NW EF +WA + VY G + R + +K +V++T+++
Sbjct: 211 GPVLIICPSSIIHNWESEFSRWASFFKVSVYHG--SNRDMILEKLKARGVEVLVTSFDTF 268
Query: 623 IKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWA 682
P+L+ +W +I DE HR+KN +SKL Y KTK R+ LTGT +QN + EL+
Sbjct: 269 RIQGPVLSGINWEIVIADEAHRLKNEKSKL-YEACLEIKTKKRIGLTGTVMQNKISELFN 327
Query: 683 LLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLK 742
L +V P + + F ++++ P + L +LR ++LRR K
Sbjct: 328 LFEWVAPGSLGTREHFRDFYDEPLKLGQRATAPERFVQIADKRKQHLGSLLRKYMLRRTK 387
Query: 743 KE-VEKDLPDKVEKVVKCKLSSLQQQLYEQML----------KHNAFFIGA--------- 782
+E + + K + VV C++S LQ+++Y++M+ K N G+
Sbjct: 388 EETIGHLMMGKEDNVVFCQMSQLQRRVYQRMIQLPEIQCLVNKDNPCACGSPLKQSECCR 447
Query: 783 -----GT----------EGATKAGIKGLNNKVMQLRKICNH-----PFVFDEVEN----- 817
GT +G + +M+L++I NH P DE E
Sbjct: 448 RIVPDGTIWSYLHRDNHDGCDSCPFCLVLPCLMKLQQISNHLELIKPNPKDEPEKQKKDA 507
Query: 818 --VINPTRENSSILYRVSGKFELLD----------RVLPKFKAS----GHRVLMFFQMTQ 861
V + +L +S +D R L K AS G ++L+F +
Sbjct: 508 EFVSTVFGTDIDLLGGISASKSFMDLSDVKHCGKMRALEKLMASWISKGDKILLFSYSVR 567
Query: 862 VMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQT 921
++DI+E FL + + RLDG T R ++ FNA S+ FL+ST+AGGLGLNL +
Sbjct: 568 MLDILEKFLIRKGYSFARLDGSTPTNLRQSLVDDFNASPSKQ-VFLISTKAGGLGLNLVS 626
Query: 922 ADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGK 981
A+ V+IFD +WNP DLQAQDR+ R GQK V + RL++ S+EE++ R + K +
Sbjct: 627 ANRVVIFDPNWNPSHDLQAQDRSFRYGQKRHVVVFRLLSAGSLEELVYTRQVYKQQL-SN 685
Query: 982 VIQAGKFDNK 991
+ AGK + +
Sbjct: 686 IAVAGKMETR 695
>7295868 [L] KOG0390 DNA repair protein SNF2 family
Length = 784
Score = 240 bits (613), Expect = 1e-62
Identities = 174/544 (31%), Positives = 280/544 (50%), Gaps = 42/544 (7%)
Query: 478 PPITDEEREKIDYYEVSHRIKETVDKQPSILVGGTLKEYQLKGLEWM---VSLYNNHLNG 534
P T+ ER +D +V + VD L+ L+ +Q +G+ +M V + NG
Sbjct: 127 PAYTEHERMGMDPTKVLVHV--VVDP----LLSNILRPHQREGVRFMYECVEGKRGNFNG 180
Query: 535 -ILADEMGLGKTIQSISLISYLYEIKNERQPFL----VIVPLSTITNWTIEFEKWAPS-L 588
I+ADEMGLGKT+Q ++L+ L E +P + V+ P S + NW EF KW L
Sbjct: 181 CIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLHGRL 240
Query: 589 RTIVYKGNPNQR--KALQH----TIKMGNFDVVLTTYEYIIKDRPLLAKHDWAHMIIDEG 642
+ +G + +AL+ + ++G V+L +YE +L K++ +I DEG
Sbjct: 241 LCLPMEGGTKENTIRALEQFSMTSARLGT-PVLLISYETFRIYAEILCKYEVGMVICDEG 299
Query: 643 HRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWF 702
HR+KN+ + L+Y KTK R++L+GTP+QN+L E ++L+NFV P++ ++ F F
Sbjct: 300 HRLKNSDN-LTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNF 358
Query: 703 NTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLS 762
+ + L ++ ++RR + + K LP K E V+ KL+
Sbjct: 359 ESAILRGQNTDSTEQERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLT 418
Query: 763 SLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKVMQLRKICNHPFV----------- 811
++Q +LY LK + + KA + L + + L+KIC+HP +
Sbjct: 419 AIQLELYTNFLKSDQVRRSLA-DCNEKASLTALAD-ITTLKKICSHPDLIYEKLTAREKG 476
Query: 812 FDEVENVINPTRENSSILYRVSGKFELLDRVLPKFKASGH-RVLMFFQMTQVMDIMEDFL 870
F+ +NV+ + + +SGKF LLD +L +A G+ +V++ TQ +D+ E
Sbjct: 477 FENSQNVLPSNYKPKDLNPELSGKFMLLDFMLAAIRAEGNDKVVLISNYTQTLDLFEQLA 536
Query: 871 RMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDT 930
R R ++RLDG + R+ ++ FN P+S+ F F+LS++AGG GLNL A+ + +FD
Sbjct: 537 RKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDP 596
Query: 931 DWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDN 990
DWNP D QA R R GQK I RL+ + S+EE IL+R K + +I DN
Sbjct: 597 DWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTII-----DN 651
Query: 991 KSTA 994
+A
Sbjct: 652 NESA 655
>ECU03g1530 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1256
Score = 231 bits (590), Expect = 4e-60
Identities = 147/525 (28%), Positives = 271/525 (51%), Gaps = 51/525 (9%)
Query: 472 KRGEEIPPITDEEREKIDYYEVSHRIKETVDKQPSILVGGTLKEYQLKGLEWMVSLYNNH 531
K +++ + + E++ ++ + +I E K P + L++YQ++G++W+ LY+
Sbjct: 759 KISKDLLEMIEREKKSLESLLDAGKIPEYHIKCP---ISVKLRDYQMEGVKWLNFLYSFS 815
Query: 532 LNGILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLSTITNWTIEFEKWAPSLRTI 591
LNGILAD+MGLGKT+Q ++ + EI + LVI P S +W E +K+ P +
Sbjct: 816 LNGILADDMGLGKTLQVLTFLCS--EIYKTNRKVLVICPSSLTGHWKSEVKKFFPFVAAE 873
Query: 592 VYKGNPNQRKALQHTIKMGNFDVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSK 651
+YK + +++++YE D + DW ++++DEGH ++N Q+
Sbjct: 874 IYKREDRD-----------TYSILISSYETFRNDYLNFIEKDWFYVVVDEGHVLRNKQTI 922
Query: 652 LSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGX 711
L Y+ + + +++LTGTP+ N++ +L +L NF++P K + N +++
Sbjct: 923 L-YSRMNMIRCSRKMVLTGTPVHNSVEDLISLFNFLMPNYIGPEKEYGS-LNVKMSDSEI 980
Query: 712 XXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQ 771
+ LH+ + PF+LRRLK +V KDLP K+ + + +L +Q++LY +
Sbjct: 981 EKTHKR--------LDLLHRKVLPFILRRLKIDVLKDLPPKIIRDITVELGPVQEKLYRE 1032
Query: 772 MLKHNAFFIGAGTEGATKAGIKGLNNKVMQLRKICNHPFVFDEVENV------INPTREN 825
+ + K G + L + ++ K+ F ++ I +++
Sbjct: 1033 IDE--------------KGGKESLGDAELEYGKVDQKNVGFKRTRDLFLAVSHIGHFKDS 1078
Query: 826 SSILYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMD-IMEDFLRMRDLKYMRLDGGT 884
+ + +V +++ L + G ++L+FFQ +D +++D ++ KY RLDG
Sbjct: 1079 TEVSCKVKALEDIIS--LCGGEDLGSKILIFFQFKSTIDLVIKDIMKKYKFKYSRLDGSV 1136
Query: 885 KAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRA 944
+ RT + + FN ++ L+T+ GGLGLNL ADTV++++ DWNP DLQA DRA
Sbjct: 1137 PSAARTKIAEEFNTGTTQML--FLTTQVGGLGLNLTGADTVVMYEHDWNPFNDLQAMDRA 1194
Query: 945 HRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFD 989
HRIGQK V + R I +++EE ++ K+ + ++ D
Sbjct: 1195 HRIGQKRTVNVFRFIARNTLEEKVMNLQSFKMFVANSLVSQQNAD 1239
>CE15856 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1529
Score = 231 bits (590), Expect = 4e-60
Identities = 165/508 (32%), Positives = 258/508 (50%), Gaps = 55/508 (10%)
Query: 513 LKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNERQPF----LVI 568
L+EYQL+G+ W+ L L+GILAD+MGLGKT+Q++ I+ + ++E F L++
Sbjct: 982 LREYQLEGITWIRFLRTYGLHGILADDMGLGKTLQTMCSIALSVD-RDEMSEFHRCSLIV 1040
Query: 569 VPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKALQHTIKMGNFDVVLTTYEYIIKDRPL 628
P + + +W +E+ ++ P + N + I + +D + T Y + DR
Sbjct: 1041 CPRTLVDHWCLEWNRFFPQR----VPASKNLTRCHGAEICVIAYDELKTAY---MMDRV- 1092
Query: 629 LAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVL 688
W ++++DEGH M+N++ + ++ K+RLIL+GTP+QN+ +LW+L +++
Sbjct: 1093 -----WNYIVLDEGHVMRNSKLR-AWKFASQLVGKSRLILSGTPVQNSPADLWSLFAWLM 1146
Query: 689 PKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKD 748
P S K F F I +LHK++ PF++RRLK EV K+
Sbjct: 1147 PGYLGSEKQFRSQFLKKIMKCRLPKANEADLKAGSAAISQLHKLVLPFVMRRLKTEVLKE 1206
Query: 749 LPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKVMQLRKICNH 808
LP+K + +C+L+ Q+++Y F + T G+ L ++ LRK+ +H
Sbjct: 1207 LPEKNVQDYECELTEDQKEIYR-------FVVDRCTSSQEDVGLSSLVT-LITLRKLTDH 1258
Query: 809 P-FVFDEVENVINPTRENSSILYRVSGKFELLDRVLPKFK-------------------A 848
V D + + P S L SGK E L ++L + + A
Sbjct: 1259 TKLVHDTLAKIGAPQYILSKALAAKSGKMEALKQLLIECEICKNPDEEVEQPEDLGGLVA 1318
Query: 849 SGHRVLMFFQMTQVMDIMEDFLRMRD----LKYMRLDGGTKAEDRTGMLKLFNAPDSEYF 904
SGHR L+F Q ++ D L+ + + ++ LDG A DR M+ FN D
Sbjct: 1319 SGHRALIFCQWKTSAKLVSDALKSGEFGSVVSHLVLDGSVPAGDRMKMVNRFNE-DKTID 1377
Query: 905 CFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSV 964
+L+T GG+GLNL ADTVI D DWNP +DLQA DRAHR+GQ V + RLIT +V
Sbjct: 1378 VLILTTHVGGVGLNLTGADTVIFLDHDWNPMKDLQAIDRAHRLGQTRNVNVYRLITQGTV 1437
Query: 965 EEVILERAMQKLDIDGKVIQAGKFDNKS 992
EE ++ A KL+ +I A DN S
Sbjct: 1438 EEKVMSLAKFKLNTAQALIGA---DNTS 1462
>Hs6912622_2 [L] KOG0390 DNA repair protein SNF2 family
Length = 808
Score = 226 bits (577), Expect = 1e-58
Identities = 156/490 (31%), Positives = 244/490 (48%), Gaps = 40/490 (8%)
Query: 529 NNHLNGILADEMGLGKTIQSISLISYL-----YEIKNERQPFLVIVPLSTITNWTIEFEK 583
N ILADEMGLGKT+Q ISLI L Y K + L++ P S + NW EF+K
Sbjct: 215 NGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQK 274
Query: 584 WAPSLRTIVYKGNPNQRKALQHTIKMGNFDVVLTTYEYIIKDRPLLAKHDWAHMIIDEGH 643
W S R ++ +Q ++ IK + V++ +YE +++ + + +I DEGH
Sbjct: 275 WLGSERIKIF--TVDQDHKVEEFIKSIFYSVLIISYEMLLRSLDQIKNIKFDLLICDEGH 332
Query: 644 RMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFN 703
R+KN+ K + L + R+ILTGTP+QN+L E +AL++FV P I S ++ + +
Sbjct: 333 RLKNSAIKTTTALISL-SCEKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYE 391
Query: 704 TPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSS 763
P + L + F+LRR ++ + K LP K+E VV C+ +
Sbjct: 392 EPIILSREPSASEEEKELGERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPGA 451
Query: 764 LQQQLYEQMLKHNA--FFIGAGTEGATKAGIKGLNNKVMQLRKICNHPFVF------DEV 815
LQ +LY ++L F + E + G L+K+CNHP + E
Sbjct: 452 LQIELYRKLLNSQVVRFCLQGLLENSPHLICIGA------LKKLCNHPCLLFNSIKEKEC 505
Query: 816 ENVINPTRENS--------------SILY--RVSGKFELLDRVLPKFKA--SGHRVLMFF 857
+ + E S +L+ + SGK ++L ++L +V++
Sbjct: 506 SSTCDKNEEKSLYKGLLSVFPADYNPLLFTEKESGKLQVLSKLLAVIHELRPTEKVVLVS 565
Query: 858 QMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGL 917
TQ ++I+++ + Y RLDG T R ++ FN+ S +F FLLS++AGG+GL
Sbjct: 566 NYTQTLNILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFIFLLSSKAGGVGL 625
Query: 918 NLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLD 977
NL +I++D DWNP D+QA R R GQK V I RL+TT ++EE I +R + K
Sbjct: 626 NLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQG 685
Query: 978 IDGKVIQAGK 987
+ G V+ K
Sbjct: 686 LCGAVVDLTK 695
>CE25143 [L] KOG0390 DNA repair protein SNF2 family
Length = 818
Score = 223 bits (567), Expect = 2e-57
Identities = 159/529 (30%), Positives = 265/529 (50%), Gaps = 45/529 (8%)
Query: 496 RIKETVDKQPSIL----VGGTLKEYQLKGLEWM------VSLYNNHLNGILADEMGLGKT 545
++KE D++ ++ VG L+ +Q G+++M +++ H I+ADEMGLGKT
Sbjct: 181 QLKEDKDRKVHVVADPVVGKILRPHQRDGVKFMWDCVTGINIPEFH-GCIMADEMGLGKT 239
Query: 546 IQSISLISYLYEIKNERQPF----LVIVPLSTITNWTIEFEKWAPSLRTI--VYKGNPNQ 599
+Q ISL+ L + P +++ P S + NW E +KW + V G Q
Sbjct: 240 LQCISLLWTLLRQSPDACPTVSKSIIVCPSSLVKNWDKEIKKWLGTRLNAMPVDSGKREQ 299
Query: 600 RKALQHTIKMGN-----FDVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSY 654
A ++ + V++ +YE +L D +I DEGHR+KN+++ L+Y
Sbjct: 300 IIACLNSFMADSKMRCAIPVLIISYETFRLYANILHSGDVGIVICDEGHRLKNSEN-LTY 358
Query: 655 TLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXX 714
K R++++GTP+QN+L E ++L+NFV P + ++ F + F
Sbjct: 359 QALSGLKCARRVLISGTPIQNDLLEYFSLVNFVNPGLLGTASEFRKKFENAILKGRDADA 418
Query: 715 XXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQML- 773
+ + ++ ++RR + K LP K E ++ CK S+LQ+ LY +++
Sbjct: 419 SSEDQKKGEEKTKEMISLVEKCIIRRTSALLTKYLPVKYEHIICCKNSTLQETLYNKLIE 478
Query: 774 --KHNAFFIGAGTEGATKAGIKGLNNKVMQLRKICNHPF-VFDEVENVINPTRENSSILY 830
K N I +GAT + + + + L+K+CNHP+ V+DE + N R ++
Sbjct: 479 CEKQNR--IVEKDKGATASALSFITH----LKKLCNHPYLVYDEFQKPDNRFRNKCLSIF 532
Query: 831 -----------RVSGKFELLDRVLPKF-KASGHRVLMFFQMTQVMDIMEDFLRMRDLKYM 878
SGK ++LD +L K + + ++ TQ +D + ++R ++
Sbjct: 533 PESFNPKSFDPSFSGKMKVLDYILAVTRKTTDDKFVLVSNYTQTIDQFMELCKLRGYDFV 592
Query: 879 RLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDL 938
RLDG + R+ ++ FN P S FCFLLS++AGG GLNL A+ +++FD DWNP D
Sbjct: 593 RLDGSMSIKQRSKIVDTFNDPASTIFCFLLSSKAGGCGLNLIGANRLVMFDPDWNPANDD 652
Query: 939 QAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGK 987
QA R R GQK I RL+ T S+EE + +R K + V+ AG+
Sbjct: 653 QAMARVWRDGQKKMCFIYRLLATGSIEEKMFQRQTHKKALSSCVVDAGE 701
>Hs4506397 [L] KOG0390 DNA repair protein SNF2 family
Length = 747
Score = 218 bits (554), Expect = 7e-56
Identities = 163/542 (30%), Positives = 277/542 (51%), Gaps = 51/542 (9%)
Query: 476 EIPPITDEEREKIDYYEVSHRIKETVDKQPSILVGGTLKEYQLKGLEWMVS-LYNNHLNG 534
E PP++ ++ K+D ++ + VD ++ L+ +Q +G++++ + + + G
Sbjct: 122 EPPPLSAHDQLKLDKEKLPVHV--VVDP----ILSKVLRPHQREGVKFLWECVTSRRIPG 175
Query: 535 ----ILADEMGLGKTIQSISLISYLY----EIKNERQPFLVIVPLSTITNWTIEFEKWAP 586
I+ADEMGLGKT+Q I+L+ L E K E +V+ P S + NW E KW
Sbjct: 176 SHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLG 235
Query: 587 S-LRTIVYKGNP------------NQRKALQHTIKMGNFDVVLTTYEYIIKDRPLLAKHD 633
++ + G NQR A + +++ +YE +L K
Sbjct: 236 GRIQPLAIDGGSKDEIDQKLEGFMNQRGARVSS------PILIISYETFRLHVGVLQKGS 289
Query: 634 WAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFN 693
+I DEGHR+KN++++ +Y T R++++GTP+QN+L E ++L++FV I
Sbjct: 290 VGLVICDEGHRLKNSENQ-TYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILG 348
Query: 694 SSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKV 753
++ F + F P +R L ++ L+RR + K LP K+
Sbjct: 349 TAHEFKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKI 408
Query: 754 EKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKVMQLRKICNHP-FVF 812
E+VV C+L+ LQ +LY++ L+ A EG K + L++ + L+K+CNHP ++
Sbjct: 409 EQVVCCRLTPLQTELYKRFLRQ-AKPAEELLEG--KMSVSSLSS-ITSLKKLCNHPALIY 464
Query: 813 DE-VE---------NVINPTRENSSILYRVSGKFELLDRVLPKFKA-SGHRVLMFFQMTQ 861
D+ VE ++ P + ++ ++SGK +LD +L ++ S +V++ TQ
Sbjct: 465 DKCVEEEDGFVGALDLFPPGYSSKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQ 524
Query: 862 VMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQT 921
+D+ E R R Y+RLDG + R +++ FN+P S F F+LS++AGG GLNL
Sbjct: 525 TLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIG 584
Query: 922 ADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGK 981
A+ +++FD DWNP D QA R R GQK I RL++ ++EE I +R K +
Sbjct: 585 ANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSC 644
Query: 982 VI 983
V+
Sbjct: 645 VV 646
>SPAC15A10.03c [L] KOG0390 DNA repair protein SNF2 family
Length = 852
Score = 217 bits (553), Expect = 9e-56
Identities = 153/507 (30%), Positives = 251/507 (49%), Gaps = 46/507 (9%)
Query: 513 LKEYQLKGLEWMVSLYNNHL----NG-ILADEMGLGKTIQSISLISYLYEIKNER----- 562
L+ +Q++G++++ + NG I+ADEMGLGKT+Q I+L+ L + +
Sbjct: 264 LRPHQIEGVKFLYKCVTGRIDRCANGCIMADEMGLGKTLQCIALLWTLLKQSPQAGKPTI 323
Query: 563 QPFLVIVPLSTITNWTIEFEKWA--PSLRTIVYKGNPNQRK---ALQHTIKMGNFDV--- 614
+ ++ P S + NW E KW ++ + G ++++ ALQ + V
Sbjct: 324 EKAIITCPSSLVKNWANELVKWLGKDAITPFILDGKSSKQELIMALQQWASVHGRQVTRP 383
Query: 615 -VLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPL 673
++ +YE + L + ++ DEGHR+KN+ S L++T + R+IL+GTP+
Sbjct: 384 VLIASYETLRSYVEHLNNAEIGMLLCDEGHRLKNSDS-LTFTALDKLNVQRRVILSGTPI 442
Query: 674 QNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVL 733
QN+L E ++LLNF P + S + F + + P + L K++
Sbjct: 443 QNDLSEYFSLLNFANPGLLGSRQEFRKNYEIPILKGRDADGTEKDKENGDAKLAELAKIV 502
Query: 734 RPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKH---NAFFIGAGTEGATKA 790
F++RR + K LP K E VV C LS Q LY+ + N G G++
Sbjct: 503 NRFIIRRTNDILSKYLPVKYEHVVFCNLSEFQLSLYKHFITSPEINKILRGTGSQPLKAI 562
Query: 791 GIKGLNNKVMQLRKICNHPFVFDEVENV-----INPT----RE----NSSILYRVSGKFE 837
G+ L+KICNHP + + E++ + P RE + +I +SGK
Sbjct: 563 GL---------LKKICNHPDLLNLTEDLEGCEALFPPGFIPRELRGRDRNIDSSLSGKML 613
Query: 838 LLDRVLPKFKA-SGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLF 896
+L+R+L + K + ++++ T +D+ E R R K +RLDG R ++ F
Sbjct: 614 VLERMLYQIKQETDDKIVLISNYTSTLDLFEQLCRARGYKALRLDGTMNVNKRQRLVDTF 673
Query: 897 NAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRIL 956
N P+ + F FLLS++AGG G+NL A+ +I+FD DWNP D QA R R GQK + +
Sbjct: 674 NDPEKDAFVFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKDCFVY 733
Query: 957 RLITTDSVEEVILERAMQKLDIDGKVI 983
R I T ++EE I +R K + V+
Sbjct: 734 RFIATGTIEEKIFQRQSHKQSLSSCVV 760
>YGL163c [L] KOG0390 DNA repair protein SNF2 family
Length = 898
Score = 214 bits (546), Expect = 6e-55
Identities = 147/483 (30%), Positives = 236/483 (48%), Gaps = 39/483 (8%)
Query: 535 ILADEMGLGKTIQSISLISYLY----EIKNERQPFLVIVPLSTITNWTIEFEKW------ 584
I+ADEMGLGKT+Q I+L+ L + K +++ P S + NW E KW
Sbjct: 332 IMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELIKWLGPNTL 391
Query: 585 ----APSLRTIVYKGNPNQRKALQHTIKMGNFDVV----LTTYEYIIKDRPLLAKHDWAH 636
++ + GN +A+ + ++V + +YE + ++ L +
Sbjct: 392 TPLAVDGKKSSMGGGNTTVSQAIHAWAQAQGRNIVKPVLIISYETLRRNVDQLKNCNVGL 451
Query: 637 MIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSK 696
M+ DEGHR+KN S L++T R+IL+GTP+QN+L E +ALL+F P + S
Sbjct: 452 MLADEGHRLKNGDS-LTFTALDSISCPRRVILSGTPIQNDLSEYFALLSFSNPGLLGSRA 510
Query: 697 TFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKV 756
F + F P +++L ++ F++RR + K LP K E V
Sbjct: 511 EFRKNFENPILRGRDADATDKEITKGEAQLQKLSTIVSKFIIRRTNDILAKYLPCKYEHV 570
Query: 757 VKCKLSSLQQQLYEQMLKHNAFF-IGAGTEGATKAGIKGLNNKVMQLRKICNHPFV---- 811
+ L LQ +LY +++K + G G+ G+ L+K+CNHP +
Sbjct: 571 IFVNLKPLQNELYNKLIKSREVKKVVKGVGGSQPLRAIGI------LKKLCNHPNLLNFE 624
Query: 812 --FDEVENVINPTRENS------SILYRVSGKFELLDRVLPKFKA-SGHRVLMFFQMTQV 862
FD+ +++ P N + + S KF +L+R L K K S ++++ TQ
Sbjct: 625 DEFDDEDDLELPDDYNMPGSKARDVQTKYSAKFSILERFLHKIKTESDDKIVLISNYTQT 684
Query: 863 MDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTA 922
+D++E R + +RLDG R ++ FN P+ + F FLLS++AGG G+NL A
Sbjct: 685 LDLIEKMCRYKHYSAVRLDGTMSINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGA 744
Query: 923 DTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKV 982
+ +I+ D DWNP D QA R R GQK + I R I+T ++EE I +R K+ + V
Sbjct: 745 NRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCV 804
Query: 983 IQA 985
+ A
Sbjct: 805 VDA 807
>At3g19210 [L] KOG0390 DNA repair protein SNF2 family
Length = 688
Score = 210 bits (535), Expect = 1e-53
Identities = 165/585 (28%), Positives = 268/585 (45%), Gaps = 64/585 (10%)
Query: 494 SHRIKETVDKQPSILVGGTL----KEYQLKGLEWMVSLYNN-----HLNG-ILADEMGLG 543
S +K+ + +I+V L + +Q +G+++M + ++NG ILAD+MGLG
Sbjct: 53 SKNVKDLLSNVTTIMVHSVLVKFLRPHQREGVQFMFDCVSGLHGSANINGCILADDMGLG 112
Query: 544 KTIQSISLISYLYEIKNERQPF----LVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQ 599
KT+QSI+L+ L + P +++ P S ++NW E +KW ++ +
Sbjct: 113 KTLQSITLLYTLLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTR 172
Query: 600 RKALQ----HTIKMGNFDVVLTTYEYIIKDRPLLAKHDWAHMII-DEGHRMKNAQSKLSY 654
L T V++ +YE + + ++I DE HR+KN Q+ +
Sbjct: 173 DDVLSGIDSFTRPRSALQVLIISYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTLTNR 232
Query: 655 TLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXX 714
L K R++L+GTP+QN+L E +A++NF P + F ++ P
Sbjct: 233 ALASL-TCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRHYYEAPIICGREPTA 291
Query: 715 XXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLK 774
L + F+LRR + LP K+ +VV CK+++LQ LY
Sbjct: 292 TEEEKNLAADRSAELSSKVNQFILRRTNALLSNHLPPKIIEVVCCKMTTLQSTLY----- 346
Query: 775 HNAFFIGAGTEGATKAGIKGLNNKVMQ----LRKICNHP-FVFDEVENVINPTR---ENS 826
N F + A K KV+ L+K+CNHP ++D +++ NP EN
Sbjct: 347 -NHFISSKNLKRALADNAK--QTKVLAYITALKKLCNHPKLIYDTIKSG-NPGTVGFENC 402
Query: 827 SILY--------------------RVSGKFELLDRVLPKF-KASGHRVLMFFQMTQVMDI 865
+ +SGK +L R+L + + R+++ TQ +D+
Sbjct: 403 LEFFPAEMFSGRSGAWTGGDGAWVELSGKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDL 462
Query: 866 MEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTV 925
R R ++RLDG T R ++ N P + F FLLS++AGG GLNL A+ +
Sbjct: 463 FAQLCRERRYPFLRLDGSTTISKRQKLVNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRL 522
Query: 926 IIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQA 985
++FD DWNP D QA R R GQK V + R ++T ++EE + +R M K + KVIQ
Sbjct: 523 VLFDPDWNPANDKQAAARVWRDGQKKRVYVYRFLSTGTIEEKVYQRQMSKEGLQ-KVIQH 581
Query: 986 GKFDNKSTAXXXXXXXXXXXXGDTNKD----DEYSGELDDEELNE 1026
+ DN ST DT+ + +SG + E++E
Sbjct: 582 EQTDN-STRQVLAGMLYASSINDTHSNGLSQSLFSGNVARSEIHE 625
>7300511 [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 1477
Score = 206 bits (525), Expect = 2e-52
Identities = 130/424 (30%), Positives = 217/424 (50%), Gaps = 61/424 (14%)
Query: 406 EKDEQR---RMERTAKQRLAALKSNDEEAYLKLLDQTKDTRITHLLKQTNSFLDSLAQAV 462
E+D+ R +++ RLAA D L + + + L +T +F D A+
Sbjct: 441 EEDQLRILSQLDEETNARLAAQDDYDAGEMKLLAQENAEAAMQRDLDKTRAF-DVFAKKK 499
Query: 463 RVQQNEVRIKRGEEIPPITDEEREKIDYYEVSHRIKETVDKQPSILVGGTLKEYQLKGLE 522
++ E + E+I P E + + QP + G TLK YQ+KG+
Sbjct: 500 EKEEEEQAQESVEDIKPEPRPEMKDLP--------------QPKMFKG-TLKGYQIKGMT 544
Query: 523 WMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLSTITNWTIEFE 582
W+ ++Y+ ++GILADEMGLGKT+QSI+ + ++ E +
Sbjct: 545 WLANIYDQGISGILADEMGLGKTVQSIAFLCHIAE----------------------HYG 582
Query: 583 KWAPSLRTIVYKGNPNQRKALQ--------HTIKMGNFDVVLTTYEYIIKDRPLLAKHDW 634
+ P + + Y G+P +RK L+ HT + +F VV+T+Y+ ++ D + W
Sbjct: 583 VFVPDFKVVPYWGSPAERKILRQFWDQKHLHT-RDASFHVVITSYQLVVSDYKYFNRIKW 641
Query: 635 AHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNS 694
+M++DE +K+A S+ + L + +NRL+L+GTP+QN++ ELWALL+F++P +F+S
Sbjct: 642 QYMVLDEAQAIKSAASQ-RWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPTLFDS 700
Query: 695 SKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVE 754
F+EWF+ + I RLH +L+PF+LRR+KK+VE +L DK+E
Sbjct: 701 HDEFNEWFSKDIES-----HAENKTGIDEKQISRLHMILKPFMLRRIKKDVENELSDKIE 755
Query: 755 KVVKCKLSSLQQQLYEQM-----LKHNAFFIGAGTEGATKAGIKGLNNKVMQLRKICNHP 809
+V C L+ Q+ LY + ++ T ++ + L N VMQ RK+CNHP
Sbjct: 756 IMVYCPLTIRQKLLYRALKQKIRIEDLLHLTSGSTTTSSSSSASNLMNLVMQFRKVCNHP 815
Query: 810 FVFD 813
+F+
Sbjct: 816 ELFE 819
Score = 95.5 bits (236), Expect = 5e-19
Identities = 56/151 (37%), Positives = 86/151 (56%), Gaps = 4/151 (2%)
Query: 817 NVINPTRENSSILYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLK 876
+++ P +E L +GK +LD +L + KA+GHRVL++ QMT+++D++E+++ R +
Sbjct: 1073 SIVVPDKET---LITDAGKLFVLDNLLTRLKANGHRVLIYSQMTKMIDLLEEYMWHRKHR 1129
Query: 877 YMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQ 936
YMRLDG +K R M+ F ++ F FLLSTRAGGLG+NL ADT+ T + P
Sbjct: 1130 YMRLDGSSKISARRDMVADFQT-RADIFVFLLSTRAGGLGINLTAADTLKSSVTPYRPKP 1188
Query: 937 DLQAQDRAHRIGQKNEVRILRLITTDSVEEV 967
+L D K L L+ + V
Sbjct: 1189 NLIRSDSPKLENDKRNGLDLELLDNPEIPSV 1219
>Hs13376715 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 336
Score = 206 bits (524), Expect = 2e-52
Identities = 129/355 (36%), Positives = 198/355 (55%), Gaps = 47/355 (13%)
Query: 540 MGLGKTIQSISLISYLYEI--KNERQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNP 597
MGLGKTIQSI+ +LYEI R PFL+I PLSTI NW EF W + +VY G+
Sbjct: 1 MGLGKTIQSIT---FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYHGSL 56
Query: 598 NQRKALQH----------TIKMG--NFDVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRM 645
R+ +Q I G F ++TT+E I+ L +W +IIDE HR+
Sbjct: 57 ISRQMIQQYEMYFRDSQGRIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRL 116
Query: 646 KNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTP 705
KN KL L +++++LTGTPLQN + EL++LL+F+ P F S TF + F
Sbjct: 117 KNKNCKLLEGLK-LMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGD- 174
Query: 706 FANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQ 765
+++L +L+P +LRRLK++VEK L K E +++ +L+++Q
Sbjct: 175 --------------LETEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQ 220
Query: 766 QQLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKVMQLRKICNHPF--------VFDEVEN 817
++ Y +L+ N F+ ++GA + + L N +M+LRK CNHP+ + E +
Sbjct: 221 KKYYRAILEKNFSFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRD 277
Query: 818 VINPTRENSSI--LYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFL 870
NP + + + + +GK L+D++LPK KA GH+VL+F QM + +DI+ED+L
Sbjct: 278 TYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYL 332
>YBR073w [L] KOG0390 DNA repair protein SNF2 family
Length = 958
Score = 206 bits (523), Expect = 3e-52
Identities = 153/491 (31%), Positives = 246/491 (49%), Gaps = 40/491 (8%)
Query: 535 ILADEMGLGKTIQSISLISYLYE----------------IKNERQPFLVIVPLSTITNWT 578
+LAD+MGLGKT+ SI+LI L + + LV+ P++ I NW
Sbjct: 343 LLADDMGLGKTLMSITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWK 402
Query: 579 IEFEKWAPSLR----TIVYKGNPNQRK-ALQHTIKMGN-FDVVLTTYEYIIKDRPLLAK- 631
EF KW R T+ + +P+ K A+++ +K+ + V++ YE ++ L K
Sbjct: 403 REFGKWLNLSRIGVLTLSSRNSPDMDKMAVRNFLKVQRTYQVLIIGYEKLLSVSEELEKN 462
Query: 632 -HDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPK 690
H ++ DEGHR+KN SK+ TL + +L+LTGTP+QN+L E + +++F+ P
Sbjct: 463 KHLIDMLVCDEGHRLKNGASKILNTLKSL-DIRRKLLLTGTPIQNDLNEFFTIIDFINPG 521
Query: 691 IFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIR--RLHKVLRPFLLRRLKKEVEKD 748
I S +F F P R + ++ + F+LRR +EK
Sbjct: 522 ILGSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKRFILRRTNAILEKY 581
Query: 749 LPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKVMQLRKICNH 808
LP K + ++ CK S Q ++ +L+ G T ++ GL + L+K+CN
Sbjct: 582 LPPKTDIILFCKPYSQQILAFKDILQGARLDFGQLTFSSSL----GL---ITLLKKVCNS 634
Query: 809 PFVFDE---VENVINPTRENSSILYRV-SGKFELLDRVLPKF-KASGHRVLMFFQMTQVM 863
P + ++ I T+ S + SGK ++L +L K + +V++ TQ +
Sbjct: 635 PGLVGSDPYYKSHIKDTQSQDSYSRSLNSGKLKVLMTLLEGIRKGTKEKVVVVSNYTQTL 694
Query: 864 DIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTAD 923
DI+E+ + M + + RLDG A+ R ++ FN + F FLLS ++GG+GLNL
Sbjct: 695 DIIENLMNMAGMSHCRLDGSIPAKQRDSIVTSFNR-NPAIFGFLLSAKSGGVGLNLVGRS 753
Query: 924 TVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVI 983
+I+FD DWNP DLQA R HR GQK I RL+TT ++E IL+R + K + K +
Sbjct: 754 RLILFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKILQRQLMKNSLSQKFL 813
Query: 984 QAGKFDNKSTA 994
+ NK ++
Sbjct: 814 GDSEMRNKESS 824
>At4g31900 [R] KOG0383 Predicted helicase
Length = 1067
Score = 194 bits (494), Expect = 6e-49
Identities = 111/309 (35%), Positives = 176/309 (56%), Gaps = 11/309 (3%)
Query: 739 RRLKKEVEKD-LPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGLNN 797
+RLKK+V KD +P K E +++ +SS Q+++Y+ ++ +N + TK ++N
Sbjct: 325 KRLKKDVLKDKVPPKKELILRVDMSSQQKEVYKAVITNNYQVL-------TKKRDAKISN 377
Query: 798 KVMQLRKICNHPFVFDEVENVINPTRENSSILYRVSGKFELLDRVLPKFKASGHRVLMFF 857
+M+LR++C+HP++ + E E + L SGK +LLD+++ K K GHRVL++
Sbjct: 378 VLMKLRQVCSHPYLLPDFEPRFEDANEAFTKLLEASGKLQLLDKMMVKLKEQGHRVLIYT 437
Query: 858 QMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGL 917
Q + ++ED+ ++ Y R+DG +R + FNA +S FCFLLSTRAGG+G+
Sbjct: 438 QFQHTLYLLEDYFTFKNWNYERIDGKISGPERQVRIDRFNAENSNRFCFLLSTRAGGIGI 497
Query: 918 NLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLD 977
NL TADTVII+D+DWNPH DLQA R HR+GQ N+V I RLI +VEE ++E K+
Sbjct: 498 NLATADTVIIYDSDWNPHADLQAMARVHRLGQTNKVMIYRLIHKGTVEERMMEITKNKML 557
Query: 978 IDGKVIQAGKFDNKSTAXXXXXXXXXXXXGDTNKDDEYSGEL--DDEELNEILARTEDEK 1035
++ V+ + + + N + SG++ DD + ++L R +
Sbjct: 558 LEHLVV-GKQHLCQDELDDIIKYGSKELFSEENDEAGRSGKIHYDDAAIEQLLDRNHVDA 616
Query: 1036 VLFKKIDEE 1044
V DEE
Sbjct: 617 VEVSLDDEE 625
Score = 92.0 bits (227), Expect = 6e-18
Identities = 66/189 (34%), Positives = 98/189 (50%), Gaps = 17/189 (8%)
Query: 415 RTAKQRLAALKSNDEEAYLKLLDQTKDTRITHLLKQTNSFLDSLAQAVRVQQNEVRIKRG 474
+T + +A + +D E YL + L NS+ +S + + QNE I+R
Sbjct: 142 KTVDRIIACREGDDGEEYLVKYKE---------LSYRNSYWESESD-ISDFQNE--IQRF 189
Query: 475 EEIPPITDEEREKIDYYEVSHRIKETVDKQPSILVGGTLKEYQLKGLEWMVSLYNNHLNG 534
++I + R+K E + + D P L G TL YQL+GL ++ ++ N
Sbjct: 190 KDIN--SSSRRDKYVENERNREEFKQFDLTPEFLTG-TLHTYQLEGLNFLRYSWSKKTNV 246
Query: 535 ILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYK 594
ILADEMGLGKTIQSI+ ++ L+E P LV+ PLSTI NW EF WAP + ++Y
Sbjct: 247 ILADEMGLGKTIQSIAFLASLFE--ENLSPHLVVAPLSTIRNWEREFATWAPHMNVVMYT 304
Query: 595 GNPNQRKAL 603
G+ R +
Sbjct: 305 GDSEARDVI 313
>SPAC22F3.03c [L] KOG0390 DNA repair protein SNF2 family
Length = 768
Score = 184 bits (468), Expect = 6e-46
Identities = 134/475 (28%), Positives = 229/475 (48%), Gaps = 28/475 (5%)
Query: 533 NGILADEMGLGKTIQSISLI------SYLYEIKNERQPFLVIVPLSTITNWTIEFEKWAP 586
+ ILADEMGLGKT+Q+I+++ SY + +V+ P++ + NW EF W
Sbjct: 187 SAILADEMGLGKTLQTITVVWTLLKQSYYANRSSTINNAMVVAPVTLLKNWENEFYNWLG 246
Query: 587 SLRTIVYKGNPNQRKALQHTIKMGNFDVVLTTYEYIIKD-RPLLAKHDWAHMIIDEGHRM 645
R VY + Q + +++T YE + R D +I DE HR+
Sbjct: 247 HERIHVYIARCAED--FQEFTSNKTYSIIITGYETVCTYLRNYGCGIDIDLLICDEAHRL 304
Query: 646 KNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTP 705
K+ S+ TL KT+ RL+LTGTPLQN+L E ++++NF++P + +F + P
Sbjct: 305 KSMSSQTWITLNKL-KTRKRLLLTGTPLQNDLSEYFSMVNFIIPGSLGTPNSFKAQYERP 363
Query: 706 FANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQ 765
+ ++RL + F LRR + K LP + + V+ K + Q
Sbjct: 364 ILRSRSMNASSRDISLGAARLQRLFEFTSNFTLRRKANILAKHLPPRTDIVLFIKPTHQQ 423
Query: 766 QQLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKVM-QLRKICNHPFVF-DEVENVINPTR 823
+ +Y +L G + + KG K++ +L KICN + +E EN ++
Sbjct: 424 ENVYGHVLD--------GFKSSVDQ--KGYYLKILTRLSKICNSTILLRNEKENFLSTEL 473
Query: 824 ENSSILYRV-----SGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYM 878
++ + + S K ++L +L F+ + ++ Q + ++++E FL + +++
Sbjct: 474 QDKHVFEQENMLLSSSKLQILAALLKSFQRGCQKAVIVSQYKETLELIELFLSILHVRFC 533
Query: 879 RLDGGTKAEDRTGMLKLFNAPD-SEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQD 937
+L G T +R ++ FN E+ LLS++AGG GLNL + +II++ WNP QD
Sbjct: 534 KLLGSTPFSERDLIVHNFNTSSFKEFSVLLLSSKAGGCGLNLTGSTRLIIYEPSWNPAQD 593
Query: 938 LQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKS 992
LQA R +R GQK V I +++ ++E I R K + I + K+
Sbjct: 594 LQALSRIYRSGQKRPVCIYTFLSSGMLDERIFIRQNTKQGLSSSFIDSDASQKKN 648
>At5g63950 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26
(contains SNF2 family DNA-dependent ATPase domain)
Length = 1053
Score = 184 bits (468), Expect = 6e-46
Identities = 151/494 (30%), Positives = 240/494 (48%), Gaps = 66/494 (13%)
Query: 513 LKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLS 572
L +Q +GL W+ SL+ GIL D+MGLGKT+Q S ++ L+ K ++ LV+ P +
Sbjct: 377 LYPHQREGLNWLWSLHTQGKGGILGDDMGLGKTMQICSFLAGLFHSKLIKRA-LVVAPKT 435
Query: 573 TITNWTIEFEKWAPSLRTIVYKGNPNQRKALQ-HTIKMGNFDVVLTTYEYIIKDRPLLAK 631
+ +W E S T Y G + + H I G ++LTTY+ + + L
Sbjct: 436 LLPHWMKELATVGLSQMTREYYGTSTKAREYDLHHILQGK-GILLTTYDIVRNNTKALQG 494
Query: 632 HD------------WAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPE 679
D W +MI+DEGH +KN ++ + +L + +R+I++GTP+QNNL
Sbjct: 495 DDHYTDEDDEDGNKWDYMILDEGHLIKNPNTQRAKSLLEI-PSSHRIIISGTPIQNNLKA 553
Query: 680 LWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLR 739
L S F + + V + L + ++PF LR
Sbjct: 554 L-------------SFNRFKQNYEHYILRGTDKNATDREQRIGSTVAKNLREHIQPFFLR 600
Query: 740 RLKKEVEKD------LPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIK 793
RLK EV D L K E VV +L++ Q+QLYE L N+ + + +G+ A +
Sbjct: 601 RLKSEVFGDDGATSKLSKKDEIVVWLRLTACQRQLYEAFL--NSEIVLSAFDGSPLAALT 658
Query: 794 GLNNKVMQLRKICNHPFVFDE--VENVINP-----TRENSSILYRVSGKFELLDRV-LPK 845
L+KIC+HP + + E+V+ T+E + + R++ + D V
Sbjct: 659 -------ILKKICDHPLLLTKRAAEDVLEGMDSTLTQEEAGVAERLA--MHIADNVDTDD 709
Query: 846 FKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFN----APDS 901
F+ + +++ +M ++ D L ++R+DG TKA DR ++ F AP
Sbjct: 710 FQTKNDSISC--KLSFIMSLL-DSLTSNGYSFLRIDGTTKAPDRLKTVEEFQEGHVAP-- 764
Query: 902 EYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITT 961
FLL+++ GGLGL L AD VI+ D WNP D Q+ DRA+RIGQ +V + RL+T+
Sbjct: 765 ---IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQTKDVIVYRLMTS 821
Query: 962 DSVEEVILERAMQK 975
+VEE I + + K
Sbjct: 822 ATVEEKIYRKQVYK 835
>SPAC3G6.12 [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 1063
Score = 183 bits (465), Expect = 1e-45
Identities = 96/209 (45%), Positives = 133/209 (62%), Gaps = 10/209 (4%)
Query: 503 KQPSILVGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNER 562
KQP +L+ LKEYQLKGL W+ +LY +NGILADEMGLGKT+QSIS+++YL E N
Sbjct: 833 KQPKMLMC-KLKEYQLKGLNWLANLYEQGINGILADEMGLGKTVQSISVMAYLAETHNIW 891
Query: 563 QPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKALQHTIKMGN--------FDV 614
PFLVI P ST+ NW E ++ P L+ I Y G+ RK L+ N F V
Sbjct: 892 GPFLVIAPASTLHNWQQEITRFVPKLKCIPYWGSTKDRKILRKFWCRKNMTYDENSPFHV 951
Query: 615 VLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQ 674
V+T+Y+ ++ D W +MI+DE +K++ S +L +K +NRL+LTGTP+Q
Sbjct: 952 VVTSYQLVVLDAQYFQSVKWQYMILDEAQAIKSSSSSRWKSLL-AFKCRNRLLLTGTPIQ 1010
Query: 675 NNLPELWALLNFVLPKIFNSSKTFDEWFN 703
N + ELWALL+F++P +F+S F EWF+
Sbjct: 1011 NTMQELWALLHFIMPSLFDSHNEFSEWFS 1039
>Hs14767157 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 348
Score = 183 bits (464), Expect = 2e-45
Identities = 115/319 (36%), Positives = 173/319 (54%), Gaps = 40/319 (12%)
Query: 739 RRLKKEVE----KDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKG 794
RR +K + D P+++EK++ Q+ ++ + A + ++ +K
Sbjct: 20 RRTRKSINYSKIDDFPNELEKLIS--------QIQPEVDRERAV-VEVNIPVESEVNLK- 69
Query: 795 LNNKVMQLRKICNHPFVFDEVENVINPTRENSSI---LYRVSGKFELLDRVLPKFKASGH 851
L N +M LRK CNHP++ +E I+P + I L SGKF +LDR+LP+ K GH
Sbjct: 70 LQNIMMLLRKCCNHPYL---IEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGH 126
Query: 852 RVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTR 911
+VL+F QMT ++DI+ D+ +RD + RLDG +R + FN D E F FL+STR
Sbjct: 127 KVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNT-DPEVFIFLVSTR 185
Query: 912 AGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILER 971
AGGLG+NL ADTVII+D+DWNP DLQAQDR HRIGQ V + RL+T +++++ I+ER
Sbjct: 186 AGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVER 245
Query: 972 AMQKLDIDGKVIQAGKFDNKSTAXXXXXXXXXXXXGDTNKDDEYSGELDDEELNEILART 1031
A K ++ +I F + LD +EL E+L
Sbjct: 246 AAAKRKLEKLIIHKNHFKGGQSGLNLS-----------------KNFLDPKELMELLKSR 288
Query: 1032 EDEKVLFKKIDEERVANEK 1050
+ E+ + K E+V ++K
Sbjct: 289 DYEREI--KGSREKVISDK 305
>Hs15805014 [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 3124
Score = 180 bits (456), Expect = 2e-44
Identities = 104/318 (32%), Positives = 173/318 (53%), Gaps = 20/318 (6%)
Query: 494 SHRIKETVDKQPSILVGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLIS 553
S R+ +V L+ G L++YQ GL+W+ LY +LNGILADE GLGKT+Q I+ +
Sbjct: 1036 SARVTTSVKFNAPSLLYGALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFA 1095
Query: 554 YLYEIKNERQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKA-LQHTIKMGNF 612
+L + P LV+V I W +E ++W P L+ + Y G+ + KA Q + +F
Sbjct: 1096 HLACNEGNWGPHLVVVRSCNILKWELELKRWCPGLKILSYIGSHRELKAKRQEWAEPNSF 1155
Query: 613 DVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTP 672
V +T+Y + + W ++IDE R+K ++ + +++ RL+L +P
Sbjct: 1156 HVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVK-GMTERHWEAVFTLQSQQRLLLIDSP 1214
Query: 673 LQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKV 732
L N ELW +++F++P I + P+ ++ V+ RLH+V
Sbjct: 1215 LHNTFLELWTMVHFLVPGI-----------SRPYLSSPLRAPSEESQDYYHKVVIRLHRV 1263
Query: 733 LRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAG- 791
+PF+LRR K++VEK L K E V+KC+LS+ Q+ LYE ++ + GT+ A K+G
Sbjct: 1264 TQPFILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALYEDVI------LQPGTQEALKSGH 1317
Query: 792 IKGLNNKVMQLRKICNHP 809
+ + +++L++ICNHP
Sbjct: 1318 FVNVLSILVRLQRICNHP 1335
Score = 110 bits (274), Expect = 2e-23
Identities = 58/144 (40%), Positives = 87/144 (60%), Gaps = 1/144 (0%)
Query: 833 SGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGM 892
SGK E L +L K K+ G RVL+ QM ++DI+E FL L Y+R+D +E R +
Sbjct: 1861 SGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQEL 1920
Query: 893 LKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNE 952
++ FN D FC +LST + G+NL ADTV+ +D D NP D +AQ+ RIG+ +
Sbjct: 1921 MRSFNR-DRRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKD 1979
Query: 953 VRILRLITTDSVEEVILERAMQKL 976
+ I RL++ +S+EE +L+ + L
Sbjct: 1980 IHIYRLVSGNSIEEKLLKNGTKDL 2003
>HsM8922362 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 310
Score = 179 bits (454), Expect = 3e-44
Identities = 103/255 (40%), Positives = 146/255 (56%), Gaps = 26/255 (10%)
Query: 799 VMQLRKICNHPFVFDEVENVINPTRENSSI---LYRVSGKFELLDRVLPKFKASGHRVLM 855
+M LRK CNHP++ +E I+P + I L SGKF +LDR+LP+ K GH+VL+
Sbjct: 1 MMLLRKCCNHPYL---IEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLL 57
Query: 856 FFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGL 915
F QMT ++DI+ D+ +RD + RLDG +R + FN D E F FL+STRAGGL
Sbjct: 58 FSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNT-DPEVFIFLVSTRAGGL 116
Query: 916 GLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQK 975
G+NL ADTVII+D+DWNP DLQAQDR HRIGQ V + RL+T +++++ I+ERA K
Sbjct: 117 GINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAK 176
Query: 976 LDIDGKVIQAGKFDNKSTAXXXXXXXXXXXXGDTNKDDEYSGELDDEELNEILARTEDEK 1035
++ +I F + LD +EL E+L + E+
Sbjct: 177 RKLEKLIIHKNHFKGGQSGLNLS-----------------KNFLDPKELMELLKSRDYER 219
Query: 1036 VLFKKIDEERVANEK 1050
+ K E+V ++K
Sbjct: 220 EI--KGSREKVISDK 232
>CE23323 [L] KOG0390 DNA repair protein SNF2 family
Length = 751
Score = 171 bits (432), Expect = 9e-42
Identities = 129/430 (30%), Positives = 206/430 (47%), Gaps = 42/430 (9%)
Query: 566 LVIVPLSTITNWTIEFEKWAPSLR-TIVYKGNPNQRKALQHTIKMGNFDVVLTTYEYIIK 624
L+IVP S + NW EF+KW +R V N Q TIK+ + V+ +Y+ +
Sbjct: 188 LIIVPSSLVNNWKAEFDKWWRLMRFPAVIALTANDITTYQSTIKLMPYLVI--SYDLAQR 245
Query: 625 DRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALL 684
L + M+ DEGH++KN KL TL + RLILTGTP+QN+ E ++LL
Sbjct: 246 HVEKLKIIRFDVMVCDEGHKLKNLDGKLRKTLLSL-EIPRRLILTGTPMQNDFEEFYSLL 304
Query: 685 NFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKE 744
+FV P +F S F + + +L++++ +LRR +
Sbjct: 305 DFVRPSVFGSIVEFRKMCSDR--------------------PEQLNELIDECMLRRTAAD 344
Query: 745 VE-KDLPDKVEKVVKCKLSSLQQQLYEQMLKH------NAFFIGAGTEGATKAGIKGLNN 797
V+ K LP+K E ++ C S +Q+ ++ ++ + + F K + L
Sbjct: 345 VDLKHLPEKHEYILFCAASPIQKHVHSEICDYMTGDALSLIFFARQLANHPKLLLDNLRE 404
Query: 798 KVMQLRKICNHPFV--FDEVENVINPTRENSSILYRVSGKFELLDRVLPKFKASGHRVLM 855
K + + + P + FD +E SGK L ++ F+ ++
Sbjct: 405 KTEKSKAHKHSPLLLAFDGAHMPRGGVKE--------SGKLTALVDMIKCFRLLQECTVI 456
Query: 856 FFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGL 915
+ +D+++ + K +RLDG T+ DR +++ FN FLLST+AGG+
Sbjct: 457 VSNYIETLDMIQQLCEYLNFKVLRLDGKTQVPDRQKLVRTFNDHRDPSNIFLLSTKAGGV 516
Query: 916 GLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQK 975
GLNL A +++FD+DWNP D QA R R GQ I RLITT ++EE +L+R ++K
Sbjct: 517 GLNLIGASRLVLFDSDWNPANDQQAMARIWRDGQVRPCHIYRLITTGTIEEKMLQRQIKK 576
Query: 976 LDIDGKVIQA 985
+ G VI A
Sbjct: 577 TGL-GCVIDA 585
>At1g08600 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 1447
Score = 169 bits (429), Expect = 2e-41
Identities = 158/567 (27%), Positives = 245/567 (42%), Gaps = 96/567 (16%)
Query: 509 VGGTLKEYQLKGLEWM----------VSLYNNHLNGILADEMGLGKTIQSISLISYLYE- 557
+ LK +Q+ G+ +M V + L ILA MGLGKT Q +I++LY
Sbjct: 683 ISAKLKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQ---VIAFLYTA 739
Query: 558 ---IKNERQPFLVIVPLSTITNWTIEFEKWAPS----LRTIVYKGNPNQRK---ALQHTI 607
+ + L++ P++ + NW EFEKW PS LR + +R+ +
Sbjct: 740 MRCVDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRERRFDLLTKWRK 799
Query: 608 KMGNFDVVLTTYEYIIKDRPLL----------AKHDWAHMII-DEGHRMKNAQSKLSYTL 656
K G F + T + + R + A D +++ DE H +KN ++ + L
Sbjct: 800 KGGVFLMGYTNFRNLSLGRGVKDLNAARGICNALRDGPDILVCDEAHIIKNTKADTTQAL 859
Query: 657 THYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXX 716
K + R+ LTG+PLQNNL E + +++FV SS F F P N
Sbjct: 860 KQV-KCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNSTA 918
Query: 717 XXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHN 776
L++ L+ F+ R V+KDLP K V+ KLS LQ+ LY++ L+
Sbjct: 919 EDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRILYQRFLELY 978
Query: 777 AFFIGAGTEGATK---------------AGI---------KGLNNKVMQLRKICN----- 807
F G E K GI G ++ + C+
Sbjct: 979 GFSDGRTDERMRKNFFAAYQVLAQILNHPGIPQLRSEDSKNGRRGSIVDIPDDCSSDENI 1038
Query: 808 -HPFVFDEVENVINPTRE-----------------NSSILYRVSGKFELLDRVLPKFKAS 849
+ V E + +N ++ N+ + SGK LL +L
Sbjct: 1039 DYNMVTGEKQRTMNDLQDKVDGYLQKDWWVDLLQKNNYKVSDFSGKMILLLDILSMSADV 1098
Query: 850 GHRVLMFFQMTQVMDIMEDFLRM------------RDLKYMRLDGGTKAEDRTGMLKLFN 897
G + L+F Q +D++E +L + + R+DG T++ +R ++ FN
Sbjct: 1099 GDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSERQKLVDRFN 1158
Query: 898 APDSEYF-CFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRIL 956
PD++ C L+STRAG LG+NL A+ VII D WNP DLQA RA R GQK V
Sbjct: 1159 EPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKKPVFAY 1218
Query: 957 RLITTDSVEEVILERAMQKLDIDGKVI 983
RL+ ++EE I +R + K + +V+
Sbjct: 1219 RLMARGTIEEKIYKRQVTKEGLAARVV 1245
>HsM14149926 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 757
Score = 162 bits (410), Expect = 3e-39
Identities = 103/306 (33%), Positives = 156/306 (50%), Gaps = 18/306 (5%)
Query: 829 LYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAED 888
+ + +GK L+D++LPK A GH+VL+F QM + +DI+ED+L R Y R+DG +
Sbjct: 1 MIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNL 60
Query: 889 RTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIG 948
R + F PDS+ F FLL TRAGGLG+NL ADT IIFD+DWNP DLQAQ R HRIG
Sbjct: 61 RQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 120
Query: 949 QKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKSTAXXXXXXXXXXXXGD 1008
Q V++ RLIT +S E + ++A KL +D V+Q N+ D
Sbjct: 121 QSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQD---INRKGGTNGVQQLSKMEVED 177
Query: 1009 TNKDDEYSGELDDEELNEILARTEDEKVLFKKIDEERVANE-------KREAIDLGLRKP 1061
+ Y +D+E+ + +++L ++ + +E K + G R
Sbjct: 178 LLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTD 237
Query: 1062 L----PRLITK-EELPSVFTEDITDHLNVEPAAIGRIRERKRVYYDDGLTEEQWLQAVDN 1116
+ P K ++ + TE + E I R R RK+ + + E++ ++ +
Sbjct: 238 ISLDDPNFWQKWAKIAELDTEAKNEK---ESLVIDRPRVRKQTKHYNSFEEDELMEFSEL 294
Query: 1117 DEDLDE 1122
D D DE
Sbjct: 295 DSDSDE 300
>7296236 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 2237
Score = 154 bits (389), Expect = 9e-37
Identities = 97/245 (39%), Positives = 144/245 (58%), Gaps = 21/245 (8%)
Query: 473 RGEEIPPITDEEREKIDYYEVSHRIKETVDKQPSILVGGTLKEYQLKGLEWM-VSLYNNH 531
R +IP ++ + +K + E+ ++++T P G +L+ YQL+GL W+ S YN H
Sbjct: 1986 RFNKIPQRSEWKSKKRPHPELWKKLEKT----PVYKGGNSLRPYQLEGLNWLKFSWYNTH 2041
Query: 532 LNGILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLSTITNWTIEFEKWAPSLRTI 591
N ILADEMGLGKTIQS++ + +YE R PFLVI PLSTI NW EFE W + +
Sbjct: 2042 -NCILADEMGLGKTIQSLTFVHSVYEY-GIRGPFLVIAPLSTIPNWQREFEGWT-DMNVV 2098
Query: 592 VYKGNPNQRKALQ-----HTIKMG-------NFDVVLTTYEYIIKDRPLLAKHDWAHMII 639
VY G+ ++ +Q + + G F+V++TT+E I+ D L +W +I
Sbjct: 2099 VYHGSVTSKQMIQDYEYYYKTESGKVLKEPIKFNVLITTFEMIVTDYMDLKAFNWRLCVI 2158
Query: 640 DEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFD 699
DE HR+KN KL L ++R++L+GTPLQNN+ EL++LLNF+ P F+S + F
Sbjct: 2159 DEAHRLKNRNCKLLEGL-RQLNLEHRVLLSGTPLQNNISELFSLLNFLEPSQFSSQEEFM 2217
Query: 700 EWFNT 704
F +
Sbjct: 2218 SEFGS 2222
>Hs20538502 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily
Length = 1359
Score = 137 bits (344), Expect = 2e-31
Identities = 119/434 (27%), Positives = 187/434 (42%), Gaps = 91/434 (20%)
Query: 637 MIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSK 696
+I DEGHR+KN Q+ S L + +++ R++LTG PLQNNL E W +++FV P + +
Sbjct: 352 VICDEGHRIKNCQASTSQALKNI-RSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQ 410
Query: 697 TFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKV 756
F F P N LH +L F+ RR ++ LP K E V
Sbjct: 411 EFSNMFERPILNGQCIDSTPQDVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENV 470
Query: 757 --------------------------------------VKCKLSSLQQQLYEQMLKHNAF 778
V CK+ + LYE + K +
Sbjct: 471 ILVRLSKIQRDLYTQFMDRFRDCGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKESLA 530
Query: 779 ---------FIGAGT-------------EGATKAGIKG--LNNKVMQ------LRKICNH 808
AGT E +T A G N+K +Q ++ N+
Sbjct: 531 NEQDLDVEELGSAGTSARCPPQGTKGKGEDSTLASSMGEATNSKFLQGVGFNPFQERGNN 590
Query: 809 PFVFDEVENVINPTRENSSILYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMED 868
++ ++++ T + +L S K LL ++ + G ++L+F Q + ++E+
Sbjct: 591 IVTYEWAKDLL--TNYQTGVLEN-SPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEE 647
Query: 869 FLR------------------MRDLKYMRLDGGTKAEDRTGMLKLFNAPDS-EYFCFLLS 909
FL +R++ Y RLDG T A +R ++ FN P + + FLLS
Sbjct: 648 FLGKREVPCPPGTEGQGAQKWVRNISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLS 707
Query: 910 TRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVIL 969
TRAG LG+NL A+ V++FD WNP D QA R +R GQK I RL+ ++E+ I
Sbjct: 708 TRAGCLGVNLIGANRVVVFDASWNPCHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIY 767
Query: 970 ERAMQKLDIDGKVI 983
+R + K + +V+
Sbjct: 768 DRQISKQGMSDRVV 781
>At1g02670 [L] KOG1002 Nucleotide excision repair protein RAD16
Length = 678
Score = 137 bits (344), Expect = 2e-31
Identities = 148/561 (26%), Positives = 240/561 (42%), Gaps = 85/561 (15%)
Query: 486 EKIDYYEVSHRIKETVDKQPSILVGGTLKEYQLKGLEWM-VSLYNNHLNGILADEMGLGK 544
E D+ E + I E ++ +++ L +YQ + L W + + GILADEMG+GK
Sbjct: 109 EDDDFDEQNAVIAEAAEQPLDLII--PLLKYQKEFLAWATIQELSAVRGGILADEMGMGK 166
Query: 545 TIQSISLISYLYEIKNERQ-----PFLVIVPLSTITNWTIEFEKWAP--SLRTIVYKGNP 597
TIQ+ISL+ E+ + LV+VP ++ W E + S R + Y G P
Sbjct: 167 TIQAISLVLARREVDRAKSREAVGHTLVLVPPVALSQWLDEISRLTSPGSTRVLQYHG-P 225
Query: 598 NQRKALQHTIKMGNFDVVLTTYEYIIK--------DRPLLAKHD--WAHMIIDEGHRMKN 647
+ K +Q K+ N+D VLTT + D + H W +I+DE H +KN
Sbjct: 226 KRDKNVQ---KLMNYDFVLTTSPIVENEYRKDEGVDETMSPLHSIKWNRIIVDEAHDIKN 282
Query: 648 AQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNT--P 705
S+ + + T R L+GTPLQN++ EL++L+++ F S+ + +T
Sbjct: 283 RSSRTAKAVFALEAT-YRWALSGTPLQNDVDELYSLVSYSFLNFFYSTYASFAFRHTHIT 341
Query: 706 FANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQ 765
FA + R+ V ++ ++ L K + +
Sbjct: 342 FARNVTVKFLIGGNILPLSIPVRIENVPAVLIM-----QINTSLGGKRRDALSVVEADFY 396
Query: 766 QQLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKVMQLRKICNHPFV-------------- 811
+ LY+ +I AGT A I GL +++LR+ +HP++
Sbjct: 397 ESLYKVSKTTFDGYIQAGTLMNNYAHIFGL---LIRLRQAVDHPYLVSYSSPSGANANLL 453
Query: 812 ------------FDEVENVINPTRENSSILYRVSG--KFELLDRV-LPKFKAS------- 849
D ++ + E+ + ++ G +L+R+ L FK S
Sbjct: 454 DANKNEKECGFGHDPSKDYFVTSSEHQASKTKLKGFRASSILNRINLDDFKTSTKIEALR 513
Query: 850 -----------GHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLF-N 897
+ ++F Q T +D++ L + ++L G + LK F
Sbjct: 514 EEIRFMVERDWSAKAIVFSQFTSFLDLISYALGKSGVSCVQLVGSMSKAAKDAALKNFKE 573
Query: 898 APDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILR 957
PD L+S +AGG+ LNL A V + D WNP + QAQDR HRIGQ VR++R
Sbjct: 574 EPDCR--VLLMSLQAGGVALNLTAASHVFMMDPWWNPAVERQAQDRIHRIGQCKPVRVVR 631
Query: 958 LITTDSVEEVILERAMQKLDI 978
I +VEE IL +K D+
Sbjct: 632 FIMEKTVEEKILTLQKKKEDL 652
>7293730 [R] KOG0383 Predicted helicase
Length = 884
Score = 126 bits (316), Expect = 3e-28
Identities = 76/227 (33%), Positives = 118/227 (51%), Gaps = 26/227 (11%)
Query: 455 LDSLAQAVRVQQNEVRIKRGEEIP-PITDEEREKIDYY-----EVSHRIKETVDKQPSIL 508
L ++ + Q + K+G + + D+E + +Y + + +K+ + QP+ L
Sbjct: 655 LRAVCTSETTQSRSKKSKKGRKSKLKVEDDEDRPVKHYTPPPEKPTTDLKKKYEDQPAFL 714
Query: 509 --VGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNERQPFL 566
G L YQ++G+ W+ + ++ ILADEMGLGKTIQ+++ + LY+ + R PFL
Sbjct: 715 EGTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLYKEGHCRGPFL 774
Query: 567 VIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKALQHT------------------IK 608
V VPLST+ NW EFE WAP I Y G+ + R ++
Sbjct: 775 VAVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGAIRGSKVSRLRTT 834
Query: 609 MGNFDVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYT 655
F+V+LT+YE I D L DWA +++DE HR+K+ QSK S T
Sbjct: 835 QYKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRLKSNQSKKSST 881
>CE27689 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 689
Score = 122 bits (306), Expect = 4e-27
Identities = 117/465 (25%), Positives = 196/465 (41%), Gaps = 76/465 (16%)
Query: 535 ILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLSTITNWTIEFEKWAPSLRTIVY- 593
+LADEMGLGK++Q++++ Y P L++ P S W + + P + I
Sbjct: 218 LLADEMGLGKSVQALTIARYY----KADWPLLIVCPASVKGAWKKQLNTFFPIIHRIFIV 273
Query: 594 --KGNPNQRKALQHTIKMGNFDVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSK 651
+P +T V + +YE ++ +L K + +I DE H +K+ +++
Sbjct: 274 DKSSDPLPDVCTSNT-------VAIMSYEQMVLKHDILKKEKYRTIIFDESHMLKDGKAR 326
Query: 652 LSYTLTHYYKTKNRLIL-TGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTG 710
+ T K +IL +GTP + EL+ + + K+F + F + G
Sbjct: 327 RTKVATDLSKVALHVILLSGTPALSRPSELFTQIRLIDHKLFTNFHEFAIRYCD--GKQG 384
Query: 711 XXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVV-------KCKLSS 763
+ + K L ++RRLK +V KDLP+K +VV ++
Sbjct: 385 RFCFEAKGCTNSEELAAIMFKRL---MIRRLKADVLKDLPEKRREVVYVSGPTIDARMDD 441
Query: 764 LQQQL--YEQM----LKHNAFFIGAGTEGATKAGIKGLNNKVMQLRKICNHPFVFDEVEN 817
LQ+ YE++ KH + G KA +C H +EN
Sbjct: 442 LQKARADYEKVNSMERKHESLLEFYSLTGIVKAAA------------VCEHI-----LEN 484
Query: 818 VINPTRENSSILYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKY 877
P A +VL+F V+D ++ + R L
Sbjct: 485 YFYPD-------------------------APPRKVLIFAHHQIVLDTIQVEVNKRKLGS 519
Query: 878 MRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQD 937
+R+DG T + RT + F D+ +LS A G+G+ L A V+ + +NP
Sbjct: 520 IRIDGKTPSHRRTALCDSFQTDDNIRVA-VLSITAAGVGITLTAASVVVFAEIHFNPGYL 578
Query: 938 LQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKV 982
+QA+DRAHR+GQK+ V + LI + ++V+ QKLD+ G+V
Sbjct: 579 VQAEDRAHRVGQKDSVFVQYLIAKKTADDVMWNMVQQKLDVLGQV 623
>CE27688 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 687
Score = 122 bits (306), Expect = 4e-27
Identities = 117/465 (25%), Positives = 196/465 (41%), Gaps = 76/465 (16%)
Query: 535 ILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLSTITNWTIEFEKWAPSLRTIVY- 593
+LADEMGLGK++Q++++ Y P L++ P S W + + P + I
Sbjct: 216 LLADEMGLGKSVQALTIARYY----KADWPLLIVCPASVKGAWKKQLNTFFPIIHRIFIV 271
Query: 594 --KGNPNQRKALQHTIKMGNFDVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSK 651
+P +T V + +YE ++ +L K + +I DE H +K+ +++
Sbjct: 272 DKSSDPLPDVCTSNT-------VAIMSYEQMVLKHDILKKEKYRTIIFDESHMLKDGKAR 324
Query: 652 LSYTLTHYYKTKNRLIL-TGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTG 710
+ T K +IL +GTP + EL+ + + K+F + F + G
Sbjct: 325 RTKVATDLSKVALHVILLSGTPALSRPSELFTQIRLIDHKLFTNFHEFAIRYCD--GKQG 382
Query: 711 XXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVV-------KCKLSS 763
+ + K L ++RRLK +V KDLP+K +VV ++
Sbjct: 383 RFCFEAKGCTNSEELAAIMFKRL---MIRRLKADVLKDLPEKRREVVYVSGPTIDARMDD 439
Query: 764 LQQQL--YEQM----LKHNAFFIGAGTEGATKAGIKGLNNKVMQLRKICNHPFVFDEVEN 817
LQ+ YE++ KH + G KA +C H +EN
Sbjct: 440 LQKARADYEKVNSMERKHESLLEFYSLTGIVKAAA------------VCEHI-----LEN 482
Query: 818 VINPTRENSSILYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKY 877
P A +VL+F V+D ++ + R L
Sbjct: 483 YFYPD-------------------------APPRKVLIFAHHQIVLDTIQVEVNKRKLGS 517
Query: 878 MRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQD 937
+R+DG T + RT + F D+ +LS A G+G+ L A V+ + +NP
Sbjct: 518 IRIDGKTPSHRRTALCDSFQTDDNIRVA-VLSITAAGVGITLTAASVVVFAEIHFNPGYL 576
Query: 938 LQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKV 982
+QA+DRAHR+GQK+ V + LI + ++V+ QKLD+ G+V
Sbjct: 577 VQAEDRAHRVGQKDSVFVQYLIAKKTADDVMWNMVQQKLDVLGQV 621
>ECU06g0820 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 556
Score = 117 bits (293), Expect = 1e-25
Identities = 134/550 (24%), Positives = 234/550 (42%), Gaps = 100/550 (18%)
Query: 449 KQTNSFLDSLAQAVR-VQQNEVRIKRGEEIPPITDEEREKIDYYEVSHRIKETVDK---- 503
K+ ++ L L ++V V+ NE RI + + + R K+ + ++ + K
Sbjct: 52 KRLSTTLSKLDESVYDVKGNEWRISGRDYVAVKEELRRNKLVFDDIPKGVLRIARKEAGW 111
Query: 504 QPSILVG---GTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKN 560
Q L+G L +Q +G+E + N I+AD+MGLGKTIQ+++ ++Y Y +
Sbjct: 112 QKFELIGPIYSMLLPFQREGVEHAL---NRGGRMIVADDMGLGKTIQALA-VAYYYRAE- 166
Query: 561 ERQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKALQHTIKMGNFDVVLTTYE 620
P ++I P S + E WA + R + R+ ++G + +YE
Sbjct: 167 --WPLVIIAPASLL-------EDWADACRRFLGMEAMVMRRKEDFGQEIG-----VVSYE 212
Query: 621 YIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNR-LILTGTPLQNNLPE 679
+LA +I DE H +K+ Q+K + + + +R L+L+GTP + E
Sbjct: 213 VASSHANVLACGAGV-VIADECHYLKSLQTKRTKAIVPLLQKVSRALLLSGTPAVSRPLE 271
Query: 680 LWALLNFVLPKIFN----------SSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRL 729
L+ +++ V IF + + +W++ + L
Sbjct: 272 LYPIISAVDRTIFPRFAEYGARYCNGRKVGQWYDYKGCSNA----------------EEL 315
Query: 730 HKVLRPFLL-RRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGAT 788
H VLR FL+ RR K EV LP K + V + + Q + + +G +
Sbjct: 316 HYVLRKFLMIRRTKDEVLGQLPPKFRRQVVLECTGRQDDPRKDL-------VGESVD--- 365
Query: 789 KAGIKGLNNKVMQLRKICNHPFVFDEVENVINPTRENSSILYRVSGKFELLDRVLPKFKA 848
N VMQ R+ V K + + + L
Sbjct: 366 -------TNVVMQYREA--------------------------VGLKVDPVKQYLATMVE 392
Query: 849 SGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLL 908
G + ++F T++M+ +E F R++ +R+DG + R ++K F + E LL
Sbjct: 393 KGMKFVVFCHHTEMMESLEGFFAERNVPMIRIDGSVPSTSRHLLVKKFQE-NEEVMVALL 451
Query: 909 STRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVI 968
S A GL L V+ + WNP LQA+DR HRIGQK+ V I+ L+ +++E +
Sbjct: 452 SITACSTGLTLTAGRAVVFAELYWNPGVLLQAEDRIHRIGQKSSVDIIYLVAKGTIDEYV 511
Query: 969 LERAMQKLDI 978
+ + KL++
Sbjct: 512 WPKLLSKLNV 521
>SPBC582.10c [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 830
Score = 116 bits (290), Expect = 3e-25
Identities = 105/372 (28%), Positives = 171/372 (45%), Gaps = 70/372 (18%)
Query: 499 ETVDKQPSILVGGTLK--EYQLKGLEWMVSLY----NNHLNGILADEMGLGKTIQSISLI 552
+++ +Q S + G ++ ++Q++GL W+ S ++ GILAD+MGLGKTIQ I+LI
Sbjct: 217 DSMQRQSSFIPGMHIRLLDHQVQGLTWLKSRETVSKSSASGGILADDMGLGKTIQMIALI 276
Query: 553 SY--LYEIKNERQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKALQHTIKMG 610
L + K+ + LV+ PLS I W E + + L IVY G ++ K L+ +
Sbjct: 277 LSHPLPKKKHSIKSTLVVAPLSLIKQWESEVQTKS-KLTAIVYHG-ASRYKLLK---VIH 331
Query: 611 NFDVVLTTYEYII-----------------------KDRPLLAKHDWAHMIIDEGHRMKN 647
+DVV+TTY+ ++ K +P L W +I+DE H +KN
Sbjct: 332 EYDVVITTYQILVSEWVSHNTTGTDGKSPTEAKSYEKKKPSLFAFYWWRIILDEAHTIKN 391
Query: 648 AQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFA 707
SK + NR LTGTPLQNN+ EL++L+ F+ FN + + + P
Sbjct: 392 KSSKSALACCALQGI-NRWCLTGTPLQNNVDELYSLVKFLHINPFNDQSVWKDQISLPLC 450
Query: 708 NTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKD-----------LPDKVEKV 756
V +RL +L +LRR K +E + L ++
Sbjct: 451 Q-----------GEENLVFKRLRMLLSVIMLRRTKTLLEANAGKDGTGGALKLSKRLVYK 499
Query: 757 VKCKLSSLQQQLYEQMLKH----NAFFIGAGTEGATKAGIKGLNNKVMQLRKICNHP--- 809
V CK ++ Y + ++ + F+ +G G I L +++LR+ CNHP
Sbjct: 500 VICKFEESERDFYSNLARNMERTMSNFVNSGKLGKNYTNILCL---LLRLRQACNHPQSL 556
Query: 810 -FVFDEVENVIN 820
F F++ + N
Sbjct: 557 NFQFEQDVDAFN 568
Score = 84.0 bits (206), Expect = 2e-15
Identities = 49/136 (36%), Positives = 74/136 (54%), Gaps = 1/136 (0%)
Query: 852 RVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTR 911
+ ++F Q T +DI++ LR + ++R DG R L L + DS L S +
Sbjct: 672 KTIIFSQFTTFLDIIDLHLRKAGIGFVRYDGRMNNRAREKSLDLLRS-DSGTQVLLCSLK 730
Query: 912 AGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILER 971
G LGLNL A VI+ D WNP + QA DR HRIGQ+ +V + +L+ +++EE I+E
Sbjct: 731 CGALGLNLTCASRVILCDVWWNPAIEEQAIDRVHRIGQRRDVLVYKLVVENTIEEKIVEL 790
Query: 972 AMQKLDIDGKVIQAGK 987
K D+ + + GK
Sbjct: 791 QNLKRDLAKQALGDGK 806
>At1g48310 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 675
Score = 116 bits (290), Expect = 3e-25
Identities = 105/394 (26%), Positives = 172/394 (43%), Gaps = 58/394 (14%)
Query: 610 GNFDVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSK-LSYTLTHYYKTKNRLIL 668
G F++V +Y+ + K LL D+ +I DE H +KN Q+K S L K + ++L
Sbjct: 297 GVFNIV--SYDVVTKLDKLLMALDFKVVIADESHFLKNGQAKRTSACLPVIKKAQYAILL 354
Query: 669 TGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIR- 727
+GTP + EL+ L + P ++ + + + + +
Sbjct: 355 SGTPALSRPIELFKQLEALYPDVYRNIHEYGGRYCKGVSPLHIEKLPRSSYKGFFGTYQG 414
Query: 728 -----RLHKVLRP-FLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFF-- 779
LH +++ ++RRLKK+V +LP K + V L++ + M + NA F
Sbjct: 415 ASNHDELHNLMKATVMIRRLKKDVLTELPSKRRQQVFLDLAA------KDMKQINALFHE 468
Query: 780 -----------IGAGTEGATKAGIKGLNNKVMQLRKICNHPFVFDEVENVINPTRENSSI 828
I + K K L NK+ + P V D +ENVI
Sbjct: 469 LKVVKSKIKDCISEDDIKSLKFIEKNLINKIYTDSAVAKIPAVLDYLENVIE-------- 520
Query: 829 LYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAED 888
+G + L+F +++ + FL+ + + +R+DG T A
Sbjct: 521 --------------------AGCKFLVFAHHQSMLEELHQFLKKKKVGCIRIDGSTPASS 560
Query: 889 RTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIG 948
R ++ F D E +LS RA G+G+ L A TVI + W P +QA+DRAHRIG
Sbjct: 561 RQALVSDFQDKD-EIKAAVLSIRAAGVGITLTAASTVIFAELSWTPGDLIQAEDRAHRIG 619
Query: 949 QKNEVRILRLITTDSVEEVILERAMQKLDIDGKV 982
Q + V I L+ D+V+++I + KLD G+V
Sbjct: 620 QVSSVNIHYLLANDTVDDIIWDVVQSKLDNLGQV 653
>Hs21071060 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 954
Score = 115 bits (289), Expect = 4e-25
Identities = 112/452 (24%), Positives = 188/452 (40%), Gaps = 62/452 (13%)
Query: 535 ILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLSTITNWTIEFEKWAPSLR----T 590
+LAD+MGLGKTIQ+I + ++ + P LV+VP S W F +W PSL
Sbjct: 455 LLADDMGLGKTIQAICIAAFY----RKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPDCIN 510
Query: 591 IVYKGNPNQRKALQHTIKMGNFDVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQS 650
+V G L I + +FD++ + + K + +IIDE H +KN+++
Sbjct: 511 VVVTGKDRLTAGL---INIVSFDLLSKLEKQL--------KTPFKVVIIDESHFLKNSRT 559
Query: 651 KLSYTLTHYYKTKNRLIL-TGTPLQNNLPELWALLNFVLPKIFNSSKTFD-EWFNTPFAN 708
K R+IL +GTP + EL+ + V P F F + +
Sbjct: 560 ARCRAAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRMP 619
Query: 709 TGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQL 768
G ++ +LRRLK +V LP K K+V
Sbjct: 620 WGWDYSGSSNLGELKLLLEEA------VMLRRLKSDVLSQLPAKQRKIVVIAPGR----- 668
Query: 769 YEQMLKHNAFFIGAGTEGATKAGIKGL--NNKVMQLRKICNHPFVFDEVENVINPTRENS 826
I A T A A K + +K Q +K D + N T E
Sbjct: 669 -----------INARTRAALDAAAKEMTTKDKTKQQQK--------DALILFFNRTAEAK 709
Query: 827 SILYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKA 886
+++ +L ++ + L+F V+D + L + ++++R+DG T +
Sbjct: 710 IP--------SVIEYILDLLESGREKFLVFAHHKVVLDAITQELERKHVQHIRIDGSTSS 761
Query: 887 EDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHR 946
+R + + F + + +LS A +GL +AD V+ + WNP +QA+DR HR
Sbjct: 762 AEREDLCQQFQLSE-RHAVAVLSITAANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHR 820
Query: 947 IGQKNEVRILRLITTDSVEEVILERAMQKLDI 978
IGQ + V I L+ + ++ + +K+ +
Sbjct: 821 IGQTSSVGIHYLVAKGTADDYLWPLIQEKIKV 852
>Hs4757978 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 220
Score = 111 bits (278), Expect = 7e-24
Identities = 68/185 (36%), Positives = 100/185 (53%), Gaps = 10/185 (5%)
Query: 520 GLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLSTITNWTI 579
G W+ ++ IL DEMGLGKT Q+I+L YL N+ PFL++ P +
Sbjct: 15 GSNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPYVCFEQ--L 72
Query: 580 EFEKWAPSLRTIVYK--GNPNQRKALQHTIKM-GNFDVVLTTYEYIIKDRPLLAKHDWAH 636
E R+ + + +R LQ +K F V+LTTYE +KD L W+
Sbjct: 73 ERRNAEICSRSFLCNICSDKEERACLQQDLKQESRFHVLLTTYEICLKDASFLKSFPWSV 132
Query: 637 MIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSK 696
+++DE HR+KN S L TL+ + L+LTGTP+QN+L EL++LL+FV P +F+
Sbjct: 133 LVVDEAHRLKNQSSLLHKTLSE-FSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLFSK-- 189
Query: 697 TFDEW 701
+EW
Sbjct: 190 --EEW 192
>Hs20336209 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 2492
Score = 105 bits (263), Expect = 4e-22
Identities = 123/479 (25%), Positives = 201/479 (41%), Gaps = 52/479 (10%)
Query: 378 NERLENDTTQRDRCYQMGRSIGNLHGHLEKDEQRRMERTAKQRLAALKSNDEEAYLKLLD 437
N+R +R R S + E++E+ + E ++ + DE K
Sbjct: 1415 NQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDENDDSKSPG 1474
Query: 438 QTKDTRITHLLKQT-------NSFLDSLAQAVRVQQNEVRIKRGEEIPPITDEEREKIDY 490
+ + +I +LK N+ + + R+ + E ++ E+ I D K
Sbjct: 1475 KGRK-KIRKILKDDKLRTETQNALKEEEERRKRIAEREREREKLREVIEIEDASPTKCPI 1533
Query: 491 YEVSHRIKETVDKQPSILVGGT----LKEYQLKGLEWMVSLYNNHLNG---------ILA 537
++ K+P + V LK +Q+ G+++M + ILA
Sbjct: 1534 TTKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILA 1593
Query: 538 DEMGLGKTIQSISLI-SYLYEIKNERQPFLVIVPLSTITNWTIEFEKWAPSLR------- 589
MGLGKT+Q +S + + L K + LV+ PL+T NW EFEKW L+
Sbjct: 1594 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1653
Query: 590 -TIVYKGNPNQRK-ALQHTIKMGNFDVVLTTYEYI--------IKDRPLLAKHDWA---- 635
+ P +R LQ + G V++ YE +K R L + A
Sbjct: 1654 SELATVKRPQERSYMLQRWQEDGG--VMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDP 1711
Query: 636 ---HMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIF 692
++ DEGH +KN S +S + + +++ R+ILTGTPLQNNL E ++NF+ +
Sbjct: 1712 GPDFVVCDEGHILKNEASAVSKAM-NSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLL 1770
Query: 693 NSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDK 752
S K F F P N L+++L + R+ + K LP K
Sbjct: 1771 GSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPK 1830
Query: 753 VEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGAT-KAGIKGLNNKVMQLRKICNHPF 810
E V+ +++S+Q +LY+ L H +G +EG KAG K L L +I HP+
Sbjct: 1831 HEYVLAVRMTSIQCKLYQYYLDH-LTGVGNNSEGGRGKAGAK-LFQDFQMLSRIWTHPW 1887
Score = 95.5 bits (236), Expect = 5e-19
Identities = 59/184 (32%), Positives = 92/184 (49%), Gaps = 23/184 (12%)
Query: 833 SGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRM-------------------- 872
SGK LL +L + G +VL+F Q +D++EDFL +
Sbjct: 2017 SGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASREKTEDKDKPLIYKGEGK 2076
Query: 873 --RDLKYMRLDGGTKAEDRTGMLKLFNAPDS-EYFCFLLSTRAGGLGLNLQTADTVIIFD 929
R++ Y RLDG T A+ R + FN + F++ST+AG LG+NL A+ VIIFD
Sbjct: 2077 WLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFD 2136
Query: 930 TDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFD 989
WNP D+Q+ R +R GQ V + R + ++E+ I +R + K + +V+ + +
Sbjct: 2137 ASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVE 2196
Query: 990 NKST 993
T
Sbjct: 2197 RHFT 2200
>Hs20336207 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 2288
Score = 105 bits (263), Expect = 4e-22
Identities = 123/479 (25%), Positives = 201/479 (41%), Gaps = 52/479 (10%)
Query: 378 NERLENDTTQRDRCYQMGRSIGNLHGHLEKDEQRRMERTAKQRLAALKSNDEEAYLKLLD 437
N+R +R R S + E++E+ + E ++ + DE K
Sbjct: 1211 NQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDENDDSKSPG 1270
Query: 438 QTKDTRITHLLKQT-------NSFLDSLAQAVRVQQNEVRIKRGEEIPPITDEEREKIDY 490
+ + +I +LK N+ + + R+ + E ++ E+ I D K
Sbjct: 1271 KGRK-KIRKILKDDKLRTETQNALKEEEERRKRIAEREREREKLREVIEIEDASPTKCPI 1329
Query: 491 YEVSHRIKETVDKQPSILVGGT----LKEYQLKGLEWMVSLYNNHLNG---------ILA 537
++ K+P + V LK +Q+ G+++M + ILA
Sbjct: 1330 TTKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILA 1389
Query: 538 DEMGLGKTIQSISLI-SYLYEIKNERQPFLVIVPLSTITNWTIEFEKWAPSLR------- 589
MGLGKT+Q +S + + L K + LV+ PL+T NW EFEKW L+
Sbjct: 1390 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1449
Query: 590 -TIVYKGNPNQRK-ALQHTIKMGNFDVVLTTYEYI--------IKDRPLLAKHDWA---- 635
+ P +R LQ + G V++ YE +K R L + A
Sbjct: 1450 SELATVKRPQERSYMLQRWQEDGG--VMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDP 1507
Query: 636 ---HMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIF 692
++ DEGH +KN S +S + + +++ R+ILTGTPLQNNL E ++NF+ +
Sbjct: 1508 GPDFVVCDEGHILKNEASAVSKAM-NSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLL 1566
Query: 693 NSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDK 752
S K F F P N L+++L + R+ + K LP K
Sbjct: 1567 GSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPK 1626
Query: 753 VEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGAT-KAGIKGLNNKVMQLRKICNHPF 810
E V+ +++S+Q +LY+ L H +G +EG KAG K L L +I HP+
Sbjct: 1627 HEYVLAVRMTSIQCKLYQYYLDH-LTGVGNNSEGGRGKAGAK-LFQDFQMLSRIWTHPW 1683
Score = 95.5 bits (236), Expect = 5e-19
Identities = 59/184 (32%), Positives = 92/184 (49%), Gaps = 23/184 (12%)
Query: 833 SGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRM-------------------- 872
SGK LL +L + G +VL+F Q +D++EDFL +
Sbjct: 1813 SGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASREKTEDKDKPLIYKGEGK 1872
Query: 873 --RDLKYMRLDGGTKAEDRTGMLKLFNAPDS-EYFCFLLSTRAGGLGLNLQTADTVIIFD 929
R++ Y RLDG T A+ R + FN + F++ST+AG LG+NL A+ VIIFD
Sbjct: 1873 WLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFD 1932
Query: 930 TDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFD 989
WNP D+Q+ R +R GQ V + R + ++E+ I +R + K + +V+ + +
Sbjct: 1933 ASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVE 1992
Query: 990 NKST 993
T
Sbjct: 1993 RHFT 1996
>Hs20336205 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 2454
Score = 105 bits (263), Expect = 4e-22
Identities = 123/479 (25%), Positives = 201/479 (41%), Gaps = 52/479 (10%)
Query: 378 NERLENDTTQRDRCYQMGRSIGNLHGHLEKDEQRRMERTAKQRLAALKSNDEEAYLKLLD 437
N+R +R R S + E++E+ + E ++ + DE K
Sbjct: 1377 NQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDENDDSKSPG 1436
Query: 438 QTKDTRITHLLKQT-------NSFLDSLAQAVRVQQNEVRIKRGEEIPPITDEEREKIDY 490
+ + +I +LK N+ + + R+ + E ++ E+ I D K
Sbjct: 1437 KGRK-KIRKILKDDKLRTETQNALKEEEERRKRIAEREREREKLREVIEIEDASPTKCPI 1495
Query: 491 YEVSHRIKETVDKQPSILVGGT----LKEYQLKGLEWMVSLYNNHLNG---------ILA 537
++ K+P + V LK +Q+ G+++M + ILA
Sbjct: 1496 TTKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILA 1555
Query: 538 DEMGLGKTIQSISLI-SYLYEIKNERQPFLVIVPLSTITNWTIEFEKWAPSLR------- 589
MGLGKT+Q +S + + L K + LV+ PL+T NW EFEKW L+
Sbjct: 1556 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1615
Query: 590 -TIVYKGNPNQRK-ALQHTIKMGNFDVVLTTYEYI--------IKDRPLLAKHDWA---- 635
+ P +R LQ + G V++ YE +K R L + A
Sbjct: 1616 SELATVKRPQERSYMLQRWQEDGG--VMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDP 1673
Query: 636 ---HMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIF 692
++ DEGH +KN S +S + + +++ R+ILTGTPLQNNL E ++NF+ +
Sbjct: 1674 GPDFVVCDEGHILKNEASAVSKAM-NSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLL 1732
Query: 693 NSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDK 752
S K F F P N L+++L + R+ + K LP K
Sbjct: 1733 GSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPK 1792
Query: 753 VEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGAT-KAGIKGLNNKVMQLRKICNHPF 810
E V+ +++S+Q +LY+ L H +G +EG KAG K L L +I HP+
Sbjct: 1793 HEYVLAVRMTSIQCKLYQYYLDH-LTGVGNNSEGGRGKAGAK-LFQDFQMLSRIWTHPW 1849
Score = 95.5 bits (236), Expect = 5e-19
Identities = 59/184 (32%), Positives = 92/184 (49%), Gaps = 23/184 (12%)
Query: 833 SGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRM-------------------- 872
SGK LL +L + G +VL+F Q +D++EDFL +
Sbjct: 1979 SGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASREKTEDKDKPLIYKGEGK 2038
Query: 873 --RDLKYMRLDGGTKAEDRTGMLKLFNAPDS-EYFCFLLSTRAGGLGLNLQTADTVIIFD 929
R++ Y RLDG T A+ R + FN + F++ST+AG LG+NL A+ VIIFD
Sbjct: 2039 WLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFD 2098
Query: 930 TDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFD 989
WNP D+Q+ R +R GQ V + R + ++E+ I +R + K + +V+ + +
Sbjct: 2099 ASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVE 2158
Query: 990 NKST 993
T
Sbjct: 2159 RHFT 2162
>7296909 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 701
Score = 105 bits (262), Expect = 5e-22
Identities = 106/451 (23%), Positives = 182/451 (39%), Gaps = 53/451 (11%)
Query: 535 ILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLSTITNWTIEFEKWAPSLRT-IVY 593
++ DEMGLGKT Q++++ Y + P LV ST +W P + V
Sbjct: 266 MICDEMGLGKTYQALAVADYF----KDDWPLLVCTTASTRDSWAKHIMDLLPKVPIHYVQ 321
Query: 594 KGNPNQRKALQHTIKMGNFDVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLS 653
N NQ + +G V++T+Y + + L + + +I DE H +KN+++K +
Sbjct: 322 VLNNNQ-------LYVGEAKVLITSYNMMERHEDKLMQRKFGFIIFDESHTLKNSKAKCT 374
Query: 654 YTLTHYYKTKNRLIL-TGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXX 712
T R++L +GTP + EL+ L + K N + + + + G
Sbjct: 375 TTAKRLTDQAKRVVLLSGTPALSRPLELFTQLQMIDGKFMNFMEFTTRYCDGKQSTFGWD 434
Query: 713 XXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQM 772
++ ++LRR K EV L +K + V + +
Sbjct: 435 ANGQSNLEELKVILHL------KYMLRRTKVEVLPQLAEKNRETVVLDPALVW------- 481
Query: 773 LKHNAFFIGAGTEGATKAGIKGLNNKVMQLRKICNHPFVFDEVENVINPTRENSSILYR- 831
T TK + N ++ + E ++ + + R
Sbjct: 482 -----------TNAETKETLDAFNKELKTAKGRATE-------EILLRFYARTAEVKTRA 523
Query: 832 VSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTG 891
V + L + KF H +M MD + DFL + Y+R+DG T+++ R+
Sbjct: 524 VCAYLKTLVKEQKKFIIFAHHRVM-------MDAISDFLSGLKVHYIRIDGQTRSDHRSD 576
Query: 892 MLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKN 951
+ F S LLS +A G+ L A+ ++ + DWNP QA+ RAHRIGQ
Sbjct: 577 SVDTFQKKSSCKVA-LLSLKACNSGITLTAAEIIVFAELDWNPSTLAQAESRAHRIGQTK 635
Query: 952 EVRILRLITTDSVEEVILERAMQKLDIDGKV 982
V LI ++ +++I K ++ KV
Sbjct: 636 PVICRYLIAHNTADDIIWNMLKNKQEVLSKV 666
>Hs17437081 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 619
Score = 102 bits (254), Expect = 4e-21
Identities = 52/118 (44%), Positives = 79/118 (66%), Gaps = 4/118 (3%)
Query: 503 KQPSILVGG-TLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYLYEIKNE 561
+QPSIL +LK YQ GL W+ ++ + LNGILADEMGLGKTIQ+I+ ++YLY+ +
Sbjct: 486 EQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQ-EGN 544
Query: 562 RQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKALQHTI--KMGNFDVVLT 617
P L++VP STI NW E W P+L+ + Y G+ +RK ++ I + +++V++T
Sbjct: 545 NGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRFNIHSRYEDYNVIVT 602
>7301343 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 1311
Score = 102 bits (253), Expect = 5e-21
Identities = 118/426 (27%), Positives = 178/426 (41%), Gaps = 62/426 (14%)
Query: 425 KSNDEEAYLKLLDQTKDTRITHLLKQTNSFLDSLAQAVRVQQ---NEVRIK-RGEEIPPI 480
K ++ +++ + +TKD +T K+ D + + +Q N + +K EI +
Sbjct: 375 KQKNKRKHIRKIIKTKDLDLT--TKEAAKEEDDRRKRIEDRQKLYNRIFVKSESVEINEL 432
Query: 481 TDEEREKIDYYEVSHRIKETVDKQPSILVGGTLKEYQLKGLEWMVSLYNNHLNG------ 534
+D+ E S + VDK + LK +Q+ G+++M L
Sbjct: 433 V------LDFDEESKKALLQVDKG----LLKKLKPHQVAGVKFMWDACFETLKESQEKPG 482
Query: 535 ---ILADEMGLGKTIQSISLISYLYEIKNERQP----FLVIVPLSTITNWTIEFEKWAP- 586
ILA MGLGKT+Q ++L L + N R+ L+I PLST+ NW EF W
Sbjct: 483 SGCILAHCMGLGKTLQVVTLSHTL--LVNTRRTGVDRVLIISPLSTVNNWAREFTSWMKF 540
Query: 587 SLRTIV-------YKGNPNQRKALQHTIKMGNFDVVLTTYEYII---KDRPLLAKHDWAH 636
+ R + YK P + L G ++ I+ K + L K
Sbjct: 541 ANRNDIEVYDISRYKDKPTRIFKLNEWFNEGGVCILGYDMYRILANEKAKGLRKKQREQL 600
Query: 637 M-----------IIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLN 685
M + DEGH +KN ++ +S +T +TK R++LTGTPLQNNL E + ++
Sbjct: 601 MQALVDPGPDLVVCDEGHLLKNEKTSISKAVTRM-RTKRRIVLTGTPLQNNLREYYCMIQ 659
Query: 686 FVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEV 745
FV P + + K + F P N LHK+L + RR +
Sbjct: 660 FVKPNLLGTYKEYMNRFVNPITNGQYTDSTERDLRLMKHRSHILHKLLEGCIQRRDYSVL 719
Query: 746 EKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKG--LNNKVMQLR 803
LP K E VV LS LQQ+LY + + G G KG L LR
Sbjct: 720 APYLPPKHEYVVYTTLSELQQKLYGYYMTTHREQSGGDVVG------KGARLFQDFQDLR 773
Query: 804 KICNHP 809
+I HP
Sbjct: 774 RIWTHP 779
Score = 99.0 bits (245), Expect = 5e-20
Identities = 74/241 (30%), Positives = 109/241 (44%), Gaps = 27/241 (11%)
Query: 833 SGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLK---------------- 876
S K +L R+L + +A G ++L+F Q Q +D++E FL + D
Sbjct: 897 SPKLLILLRLLQQCEAIGDKLLVFSQSLQSLDVIEHFLSLVDSNTKNYEFEGDVGDFKGC 956
Query: 877 ------YMRLDGGTKAEDRTGMLKLFN-APDSEYFCFLLSTRAGGLGLNLQTADTVIIFD 929
Y RLDG E R M K FN + FL+STRAGGLG+NL A+ V+IFD
Sbjct: 957 WTSGKDYFRLDGSCSVEQREAMCKQFNNITNLRARLFLISTRAGGLGINLVAANRVVIFD 1016
Query: 930 TDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFD 989
WNP D Q+ R +R GQ I RLI ++E+ + ER + K +VI +
Sbjct: 1017 VSWNPSHDTQSIFRVYRFGQIKPCYIYRLIAMGTMEQKVYERQVAKQATAKRVIDEQQIS 1076
Query: 990 NKSTAXXXXXXXXXXXXGDTNKDDEYSGELDDEELNEILARTEDEKVLFKKIDEERVANE 1049
T ++ + D EIL TE EK++FK + + + +
Sbjct: 1077 RHYNQTDLMELYSYELKPSTEREMPILPK--DRLFAEIL--TEHEKLIFKYHEHDSLLEQ 1132
Query: 1050 K 1050
+
Sbjct: 1133 E 1133
>SPBC23E6.02 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1040
Score = 101 bits (252), Expect = 7e-21
Identities = 99/376 (26%), Positives = 173/376 (45%), Gaps = 67/376 (17%)
Query: 480 ITDEEREKIDYYEVSHRIKETVDKQPSILVGG------TLKEYQLKGLEWMVSLY-NNHL 532
+ D+++++++ E+ + E + P+I G TL E+Q +GL W+ L ++
Sbjct: 353 VQDDQQQQLE--ELFKDLDEQLVNDPTIREGTPAGLIPTLMEHQKEGLMWLKRLEESSKK 410
Query: 533 NGILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLSTITNWTIE-FEKWAPSLRTI 591
GILAD+MGLGKT+Q+++L+ + L+I P+S + W E K APS R
Sbjct: 411 GGILADDMGLGKTVQALALLVTRPPESKSVKTTLIITPVSLLQQWHNEILTKIAPSHRPT 470
Query: 592 VYKGNPNQRKALQHTI--KMGNFDVVLTTYEYI-------------IKDRPLLAKH---- 632
VY + + +K H I ++ ++D+VLTTY I I+D + K
Sbjct: 471 VYIHHGSSKK---HKIAEQLMSYDIVLTTYNVIAYEFKNKMAYDKSIEDNAPIKKFEHLP 527
Query: 633 ----DWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVL 688
+W +I+DE +KN ++ L+ ++ R L+GTP+QN + E ++L+ F+
Sbjct: 528 FFEAEWYRVILDEAQTIKN-RNTLAARGCCLLESTYRWCLSGTPMQNGVEEFYSLIKFLR 586
Query: 689 PKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKK----- 743
K ++ +F + F P ++ ++R +L+ LLRR K
Sbjct: 587 IKPYSDWSSFSKDFTIPLSSN----------INTSAPMKRFRGLLKAVLLRRTKNTKIDG 636
Query: 744 EVEKDLPDKVEKVVKCKLSSLQQQLYE--------QMLKHNAFFIGAGTEGATKAGIKGL 795
+ LP K + LSS + + Y QM K+ EG L
Sbjct: 637 KPILTLPPKTAVKSETDLSSSEMEFYNTLQSGAQIQMRKYL-------QEGTITTHYGSL 689
Query: 796 NNKVMQLRKICNHPFV 811
+++LR+ C HP++
Sbjct: 690 LVLLLRLRQACCHPWL 705
Score = 86.7 bits (213), Expect = 2e-16
Identities = 47/127 (37%), Positives = 71/127 (55%), Gaps = 1/127 (0%)
Query: 852 RVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTR 911
++L+F Q +++ R +KY+ GG +R L F D L+S +
Sbjct: 885 KILIFSQFVSFLELFTVPFRQEGIKYLMYTGGLSTAERNQALINFEV-DPNVRVLLISLK 943
Query: 912 AGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILER 971
AG +GLNL A+ VII D WNP+ + QA DRAHRIGQ V ILR++T +++EE +L
Sbjct: 944 AGNVGLNLTCANHVIILDPFWNPYIEEQAVDRAHRIGQDKPVNILRIVTNNTIEERVLAL 1003
Query: 972 AMQKLDI 978
+K ++
Sbjct: 1004 QDRKREL 1010
>CE17477 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily
Length = 1274
Score = 100 bits (248), Expect = 2e-20
Identities = 78/292 (26%), Positives = 128/292 (43%), Gaps = 32/292 (10%)
Query: 786 GATKAGIKGLNNKVMQLRKICNHPFVFDEVENVINPTRENSSILYRVSGKFELLDRVLPK 845
G+ KA ++ ++ + + F+ E EN Y++ E+LD +
Sbjct: 736 GSKKAPKSDEEDEEVEKESRMKYDWTFELFEKYQEGVLENG---YKIVISLEILD----E 788
Query: 846 FKASGHRVLMFFQMTQVMDIMEDFLRMRDLK--------------YMRLDGGTKAEDRTG 891
G ++L+F Q +D++E+ L+ R ++ Y+RLDG T DR
Sbjct: 789 STQIGEKILIFSQNLTALDMLEEILKKRQIRGKDGPGQRWEKNRNYLRLDGTTSGADREK 848
Query: 892 MLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKN 951
++ FN+ + FL+STRAG LG+NL +A+ II D WNP D QA R +R GQ+
Sbjct: 849 LINRFNS-EPGLSLFLISTRAGSLGINLVSANRCIIIDACWNPCHDAQAVCRVYRYGQQK 907
Query: 952 EVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKSTAXXXXXXXXXXXXGDTNK 1011
+ + RLI +S+E I R + K + +V+ + D + D N
Sbjct: 908 KTFVYRLIMDNSMERSIFNRQISKHGLQQRVVDDAQVDANISQKELETLLMYDEAQDVNH 967
Query: 1012 DDEYSGELD--DEELNEILARTED--------EKVLFKKIDEERVANEKREA 1053
D + + D D L+ I R + L + ++ EKREA
Sbjct: 968 DKWNTDDWDFGDPVLDSITKRMSQMFAGKPFLHETLIMESEQSLSEQEKREA 1019
Score = 79.7 bits (195), Expect = 3e-14
Identities = 57/176 (32%), Positives = 88/176 (49%), Gaps = 12/176 (6%)
Query: 637 MIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSK 696
++ DEGH++KN +++S TL TK R++LTG PLQNNL E + +++FV PK + K
Sbjct: 460 VVCDEGHKIKNITAEISMTLGAI-NTKRRIVLTGYPLQNNLLEYFCMIDFVRPKYLGTRK 518
Query: 697 TFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKV 756
+F + F P N L ++++ F+ RR ++K LP+ E V
Sbjct: 519 SFIDRFEKPIKNGQCVDSSPDDVKIALQRTHVLVELVKGFVQRRTHHLLKKILPESKEYV 578
Query: 757 VKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKVMQL---RKICNHP 809
+ + S +Q+QLY F + A E A A + N +M KI NHP
Sbjct: 579 LLLRKSQIQRQLYRN------FVLWAKNEIA--ANNDAVFNPLMAFSACSKIWNHP 626
Score = 52.4 bits (124), Expect = 5e-06
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 16/86 (18%)
Query: 513 LKEYQLKGLEWMVSLYNNHLNG------------ILADEMGLGKTIQSISLISYLYEIKN 560
L+ +QL G+ +M Y+N + ILA MGLGKTIQ I+ S ++
Sbjct: 256 LQPHQLGGIRFM---YDNTIESLGEYKKSDGFGCILAHSMGLGKTIQVITF-SEIFLRAT 311
Query: 561 ERQPFLVIVPLSTITNWTIEFEKWAP 586
+ + LVIVP++TI NW E++KW P
Sbjct: 312 KAKKVLVIVPINTIQNWYSEYDKWIP 337
>At5g07810 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 1178
Score = 98.6 bits (244), Expect = 6e-20
Identities = 122/526 (23%), Positives = 220/526 (41%), Gaps = 60/526 (11%)
Query: 496 RIKETVDKQPSILVGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLISYL 555
++++ ++ P LV L +QL GL + + +ADEMGLGKT+Q+I++
Sbjct: 188 KVEQLIETLPRKLVNALLP-FQLDGLRFGLRRGGRCF---IADEMGLGKTLQAIAIAGCF 243
Query: 556 YEIKNERQPFLVIVPLSTITNWTIEFEKWAPS-LRTIVYK--GNPNQRKALQHTIKMGNF 612
LV+ P W E E+W PS L + V+ G+ + L K
Sbjct: 244 IS----EGSILVVCPAVLRFTWAEELERWLPSCLPSDVHLVFGHQDNPAYLPRWPK---- 295
Query: 613 DVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSK-----LSYTLTHYYKTKNRLI 667
VV+ +Y+ + R + + +WA +I+DE H ++ ++ K + L K K+ ++
Sbjct: 296 -VVVISYKMLQHLRTTMLEREWALLIVDESHHLRCSKKKSDPPEIKTVLDVAEKVKHIIL 354
Query: 668 LTGTPLQNNLPELWALLNFVLPKIFNSSK-TFDEWFNTPFANTGXXXXXXXXXXXXXXVI 726
L+GTP + P + K F + + G ++
Sbjct: 355 LSGTPSVSR------------PGLLGKDKYEFAKTYCEVGLVRGIQGKIFQDFSKGTRLL 402
Query: 727 RRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLS----SLQQQLYEQMLKHNAFFIGA 782
+ + ++RRLK+ + LP K ++V L +L + + K I
Sbjct: 403 ELNILLNQTVMIRRLKQHLLTQLPPKRRQIVTILLKKSDIALAMAIVSEAKKQKDGAIAE 462
Query: 783 GTE----------GATKAGIKGLNNK----VMQLRKICNHPFVFDEVENVINPTRENSSI 828
TE G+ +AG N + ++C ++ RE S+
Sbjct: 463 VTEKSHEPDQNARGSNEAGHVNAENSDGPNSDKENQLCGKLSYQQLGIAKLSAFREWLSL 522
Query: 829 LYRVSGKFELLDRVLPKFKA--SGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKA 886
+SG LD + S ++++F +V+D +++F+ + + ++R+DG T
Sbjct: 523 HPLLSG----LDYTPEEIDGDRSSTKMVVFAHHHKVLDGIQEFICDKGIGFVRIDGTTLP 578
Query: 887 EDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHR 946
DR ++ F SE ++ AGG+GL+ A V+ + P LQA+DRAHR
Sbjct: 579 RDRQLAVQSFQF-SSEVKIAIIGVEAGGVGLDFSAAQNVVFLELPKTPSLLLQAEDRAHR 637
Query: 947 IGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKS 992
GQ + V + D+++E + +KL GK+D K+
Sbjct: 638 RGQTSAVNVYIFCAKDTMDESNWQNLNKKLHRISSTTD-GKYDGKT 682
>SPCC330.01c [L] KOG1002 Nucleotide excision repair protein RAD16
Length = 963
Score = 97.4 bits (241), Expect = 1e-19
Identities = 109/433 (25%), Positives = 192/433 (44%), Gaps = 69/433 (15%)
Query: 427 NDEEAYLKLLDQTKDTRITHLLKQTNSFLDSLAQAVRVQQNEVRIKRGEEIPPITDEERE 486
+DEE+ + L Q+K R++ + S S QA + +E R P + E
Sbjct: 277 SDEES-IPLSYQSKRRRVSARASSSASS-SSRTQAKSIPSHERTHYRLIRQHPELEHVWE 334
Query: 487 KIDYYEVSHRIKETVDKQPSILVGGTLKEYQLKGLEWMVSLYNNHLNG-ILADEMGLGKT 545
K++ E +K+ +QP LV L +Q +G+ W+ ++ G ILADEMG+GKT
Sbjct: 335 KLEE-EAPREVKQI--EQPKELVLNLLP-FQREGVYWLKRQEDSSFGGGILADEMGMGKT 390
Query: 546 IQSISLISYLYEIKNERQPFLVIVPLSTITNWTIEFEKWA-PSLRTIVYKGNPNQRKALQ 604
IQ+I+L+ L E + +P LV+ P+ I W E + +L T +Y G +
Sbjct: 391 IQTIALL--LSEPRG--KPTLVVAPVVAIMQWKEEIDTHTNKALSTYLYYGQARDISGEE 446
Query: 605 HTIKMGNFDVVLTTYEYI-----------------IKDRPLLAKHDWAHMIIDEGHRMKN 647
+ ++DVVLT+Y I +K++ LL + ++ +I+DE H +K+
Sbjct: 447 ----LSSYDVVLTSYNVIESVYRKERSGFRRKNGVVKEKSLLHQMEFYRIILDEAHGIKS 502
Query: 648 AQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFV-----------------LPK 690
+ + +T ++ L+GTPLQN + EL++LL F+ L
Sbjct: 503 RTCNTARAVCG-LRTTRKICLSGTPLQNRIGELFSLLRFLRADPFAYYYCLQCECKSLHW 561
Query: 691 IFNSSKTFDEWFNTPFANTGXXXX-------XXXXXXXXXXVIRRLHKVLRPFLLRRLKK 743
F+ DE + P ++T +++H +L+ +LRR K
Sbjct: 562 RFSDRSNCDECGHKPMSHTCYFNAEMLKPIQKFGYEGPGKLAFKKVHSLLKHIMLRRTKL 621
Query: 744 EVEKD--LPDKVEKVVKCKLSSLQQQLYEQML-----KHNAFFIGAGTEGATKAGIKGLN 796
E D LP +V +V K + ++ +Y+ + K N + EG +
Sbjct: 622 ERADDLGLPPRVVEVRKDLFNEEEEDVYQSLYMDSKRKFNTYL----AEGVVLNNYANIF 677
Query: 797 NKVMQLRKICNHP 809
+ ++R++ +HP
Sbjct: 678 QLITRMRQMADHP 690
Score = 81.3 bits (199), Expect = 1e-14
Identities = 54/161 (33%), Positives = 84/161 (51%), Gaps = 10/161 (6%)
Query: 824 ENSSILYRV-------SGKFELL--DRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRD 874
+N+SIL R+ S K E L + L + K + ++F Q T ++D++ LR
Sbjct: 775 KNASILNRIDMNSWRSSTKIEALVEELYLLRKKDRTLKSIVFSQFTSMLDLIHWRLRKAG 834
Query: 875 LKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNP 934
++LDGG + R ++ F+ D FL+S +AGG+ LNL A V + D WN
Sbjct: 835 FNCVKLDGGMTPKARAATIEAFSN-DINITIFLVSLKAGGVALNLTEASQVFMMDPWWNG 893
Query: 935 HQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQK 975
QA DR HRIGQK ++++ L +S+E I+E +K
Sbjct: 894 AVQWQAMDRIHRIGQKRPIKVITLCIENSIESKIIELQEKK 934
>7298963 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 1061
Score = 97.4 bits (241), Expect = 1e-19
Identities = 56/167 (33%), Positives = 93/167 (55%), Gaps = 2/167 (1%)
Query: 829 LYRVSGKFELLDRVLPK--FKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKA 886
L+R S K ++ ++L K+S + ++ Q T V+DI+ D L + + L+G
Sbjct: 885 LHRPSSKINMVIQILKTSILKSSDDKAIVVSQWTSVLDILRDHLSKDGVATLSLNGTIPV 944
Query: 887 EDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHR 946
++R ++ FN +++ LLS AGG+GLNL A+ +++ D WNP + QAQDR +R
Sbjct: 945 KNRQDIVNEFNDRNNQKRVLLLSLTAGGVGLNLIGANHLLLLDLHWNPQLEAQAQDRIYR 1004
Query: 947 IGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKST 993
+GQK V I + + D+VE+ I +KLD+ V+ K +K T
Sbjct: 1005 VGQKKNVIIYKFMCVDTVEQRIKGLQDKKLDLADGVLTGAKVSSKLT 1051
Score = 87.0 bits (214), Expect = 2e-16
Identities = 79/312 (25%), Positives = 137/312 (43%), Gaps = 69/312 (22%)
Query: 512 TLKEYQLKGLEWMVSLYNNHL--NGILADEMGLGKTIQSISLI------SYLYEIKNE-- 561
+L +Q L WM S L GILAD+MGLGKT+ IS + + E K+E
Sbjct: 438 SLMNHQKHALAWM-SWRERKLPRGGILADDMGLGKTLTMISSVLACKNGQEMSEGKDESS 496
Query: 562 ---------------------------RQPFLVIVPLSTITNWTIEFEKWAP--SLRTIV 592
R LV+ P S + W E E L V
Sbjct: 497 DSDSEDDKNKKRKSVTGWKSKGRKDTRRGGTLVVCPASLLRQWESEVESKVSRQKLTVCV 556
Query: 593 YKGNPNQRKALQHTIKMGNFDVVLTTYEYIIKDRPLLAKH---DWAHMIIDEGHRMKNAQ 649
+ GN + K + ++D+V+TTY+ + ++ L+ W +I+DE H ++N +
Sbjct: 557 HHGNNRETKGKY----LRDYDIVVTTYQIVAREHKSLSAVFGVKWRRIILDEAHVVRNHK 612
Query: 650 SKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANT 709
S+ S + + K R LTGTP+QN +++ALL F+ F+ T+ +W + A
Sbjct: 613 SQSSLAVCDL-RGKYRWALTGTPIQNKELDVYALLKFLRCSPFDDLHTWKKWIDNKSAGG 671
Query: 710 GXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKD-----LPDKVEKVVKCKLSSL 764
RL+ +++ +LRR K +++ D LP+K ++++ L
Sbjct: 672 Q----------------NRLNLLMKSLMLRRTKAQLQSDGKLNSLPNKELRLIEISLDKE 715
Query: 765 QQQLYEQMLKHN 776
+ +Y+ ++ ++
Sbjct: 716 EMNVYQTVMTYS 727
>At2g21450 [L] KOG0390 DNA repair protein SNF2 family
Length = 816
Score = 96.7 bits (239), Expect = 2e-19
Identities = 129/511 (25%), Positives = 200/511 (38%), Gaps = 104/511 (20%)
Query: 535 ILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLSTITNWTIEFEKWAPS------L 588
ILA G GKT IS + + + +P LV++P I +W EF W
Sbjct: 289 ILAHAPGSGKTFLLISFLQSFMAMDPQARP-LVVLPKGIIESWKREFTLWEVEKIPLLDF 347
Query: 589 RTIVYKGNPNQRKALQHTIKM-----------------GNFDVVLTTYEYIIKDRPLLAK 631
++ + Q K L IK NF+ + I+ ++P L
Sbjct: 348 YSVKAESRKQQLKVLGQWIKERSILFLGYQQFTRIICDDNFEAASEDCKLILLEKPTL-- 405
Query: 632 HDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKI 691
+I+DEGH +N ++ + +L KT+ +++LTGT QNN+ E++ +L+ V PK
Sbjct: 406 -----LILDEGHTSRNKETYMLSSLARV-KTRRKVVLTGTLFQNNVEEVFNILDLVRPKF 459
Query: 692 F------------------------NSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIR 727
N S + E T FA +I+
Sbjct: 460 LKRPGTREIVSRIMSKAEIPRGKQVNQSSSSIE--GTFFAAVELTLQRSTNFSAKASLIK 517
Query: 728 RLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQ---------QLYEQMLKHNAF 778
L ++ R +L K + LP E V LSS+Q+ +L++Q+ A
Sbjct: 518 DLREMTRN-ILHYHKADFSGLLPGLSEFTVMLNLSSIQRDEVKGLRKMELFKQISLGAAL 576
Query: 779 FIG----AGTEGATKAGIKGL---NNKVMQLRKICNHPFVFDEVENVINPTRENSSILYR 831
+I + E G KG N VM+L K+ V D V
Sbjct: 577 YIHPKLKSFLEENPSNGEKGFSDNNTTVMKLDKMLKKINVRDGV---------------- 620
Query: 832 VSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLD-------GGT 884
K + +L +++G ++L+F Q + +E M +K RL G +
Sbjct: 621 ---KMKFFLNLLALCESTGEKLLVFSQYIVPIKTLERL--MSSMKGWRLGKEMFTITGDS 675
Query: 885 KAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRA 944
E R ++ FN E F S +A G G++L A V+I D NP QA RA
Sbjct: 676 SNEQREWSMERFNN-SLEAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTQQAVARA 734
Query: 945 HRIGQKNEVRILRLITTDSVEEVILERAMQK 975
+R GQK +V +L+ DS EE E +K
Sbjct: 735 YRPGQKRKVYAYKLVAADSPEEENYETCTRK 765
>YBR114w [L] KOG1002 Nucleotide excision repair protein RAD16
Length = 790
Score = 95.9 bits (237), Expect = 4e-19
Identities = 111/467 (23%), Positives = 189/467 (39%), Gaps = 101/467 (21%)
Query: 414 ERTAKQRLAALKSNDEEAYLKLLDQTK----DTRITHLLKQTNSFLDSLAQAVRVQQNEV 469
ERTA ND + +++ ++ D +T K T ++ +
Sbjct: 81 ERTATDENTHAIKNDNDEIIEIKEERDVSDDDEPLTKKRKTT------------ARKKKK 128
Query: 470 RIKRGEEIPPITDEEREKIDYYEVSHRIKETV-------------DKQPSILVGGTLK-- 514
+ ++ P +T ER + YE ++ KQP G T+K
Sbjct: 129 KTSTKKKSPKVTPYERNTLRLYEHHPELRNVFTDLKNAPPYVPQRSKQPD---GMTIKLL 185
Query: 515 EYQLKGLEWMVSLYNN-HLNGILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLST 573
+QL+GL W++S + + G+LADEMG+GKTIQ+I+L+ + P LV+ P
Sbjct: 186 PFQLEGLHWLISQEESIYAGGVLADEMGMGKTIQTIALLMN----DLTKSPSLVVAPTVA 241
Query: 574 ITNWTIEFEKWAP-SLRTIVYKG--NPNQRKALQHTIKMGNFDVVLTTYEY--------- 621
+ W E E+ L+ +Y G K LQ +DVVLTTY
Sbjct: 242 LMQWKNEIEQHTKGQLKIYIYHGASRTTDIKDLQ------GYDVVLTTYAVLESVFRKQN 295
Query: 622 --------IIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPL 673
+ K +L D+ +I+DE H +K+ QS + + + KT+ R L+GTPL
Sbjct: 296 YGFRRKNGLFKQPSVLHNIDFYRVILDEAHNIKDRQSNTARAVNN-LKTQKRWCLSGTPL 354
Query: 674 QNNLPELWALLNFVLPKIFN---------SSKTF--------DEWFNTPFANTGXXXXXX 716
QN + E+++L+ F+ F +SK + D + +T
Sbjct: 355 QNRIGEMYSLIRFLNINPFTKYFCTKCDCASKDWKFTDRMHCDHCSHVIMQHTNFFNHFM 414
Query: 717 XXXXXXXXV-------IRRLHKVLRPFLLRRLKKEVEKD--LPDKVEKVVKCKLSSLQQQ 767
V + +L+ +LRR K E D LP ++ V + + ++
Sbjct: 415 LKNIQKFGVEGPGLESFNNIQTLLKNIMLRRTKVERADDLGLPPRIVTVRRDFFNEEEKD 474
Query: 768 LYEQML-----KHNAFFIGAGTEGATKAGIKGLNNKVMQLRKICNHP 809
LY + K+N+F EG + + ++R++ +HP
Sbjct: 475 LYRSLYTDSKRKYNSFV----EEGVVLNNYANIFTLITRMRQLADHP 517
Score = 81.6 bits (200), Expect = 7e-15
Identities = 53/159 (33%), Positives = 84/159 (52%), Gaps = 3/159 (1%)
Query: 822 TRENSSILYRVSGKFELLDRVLPKFKASGHRV--LMFFQMTQVMDIMEDFLRMRDLKYMR 879
+R N S ++ S K E L L K +++ + ++F Q T ++D++E L+ + ++
Sbjct: 607 SRLNMSGKWQSSTKIEALVEELYKLRSNKRTIKSIVFSQFTSMLDLVEWRLKRAGFQTVK 666
Query: 880 LDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQ 939
L G R +K F + + FL+S +AGG+ LNL A V I D WNP + Q
Sbjct: 667 LQGSMSPTQRDETIKYF-MNNIQCEVFLVSLKAGGVALNLCEASQVFILDPWWNPSVEWQ 725
Query: 940 AQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDI 978
+ DR HRIGQ V+I R DS+E I+E +K ++
Sbjct: 726 SGDRVHRIGQYRPVKITRFCIEDSIEARIIELQEKKANM 764
>At5g22750 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1029
Score = 93.2 bits (230), Expect = 2e-18
Identities = 85/343 (24%), Positives = 146/343 (41%), Gaps = 84/343 (24%)
Query: 534 GILADEMGLGKTIQSISLI----------------------------------------- 552
GILAD MGLGKT+ +ISL+
Sbjct: 415 GILADAMGLGKTVMTISLLLAHSWKAASTGFLCPNYEGDKVISSSVDDLTSPPVKATKFL 474
Query: 553 ---SYLYEIKNERQPF--LVIVPLSTITNWTIEFEKWAP--SLRTIVYKGN--PNQRKAL 603
L E K+ Q L++ P++ + W E E A SL V+ G P K L
Sbjct: 475 GFDKRLLEQKSVLQNGGNLIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYGQSRPKDAKLL 534
Query: 604 QHTIKMGNFDVVLTTYEYIIKD--RPLLAKHD------WAHMIIDEGHRMKNAQSKLSYT 655
+ DVV+TTY + + + A H+ W +++DE H +KN++S++S
Sbjct: 535 SQS------DVVITTYGVLTSEFSQENSADHEGIYAVRWFRIVLDEAHTIKNSKSQISLA 588
Query: 656 LTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXX 715
+ R LTGTP+QNNL +L++LL F+ + + + +++ PF
Sbjct: 589 AAALVADR-RWCLTGTPIQNNLEDLYSLLRFLRIEPWGTWAWWNKLVQKPFEEGDERG-- 645
Query: 716 XXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKD------LPDKVEKVVKCKLSSLQQQLY 769
++ + +L+P +LRR K +++ LP +V+ C+LS ++ Y
Sbjct: 646 ----------LKLVQSILKPIMLRRTKSSTDREGRPILVLPPADARVIYCELSESERDFY 695
Query: 770 EQMLKHNAF-FIGAGTEGATKAGIKGLNNKVMQLRKICNHPFV 811
+ + K + F +G + +++LR+ C+HPF+
Sbjct: 696 DALFKRSKVKFDQFVEQGKVLHNYASILELLLRLRQCCDHPFL 738
Score = 87.4 bits (215), Expect = 1e-16
Identities = 49/134 (36%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
Query: 833 SGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGM 892
S K L L ++SG + ++F Q T +D+++ L + ++RLDG + R +
Sbjct: 862 SSKITALLEELEGLRSSGSKSILFSQWTAFLDLLQIPLSRNNFSFVRLDGTLSQQQREKV 921
Query: 893 LKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNE 952
LK F+ D L+S +AGG+G+NL A + D WNP + QA R HRIGQ E
Sbjct: 922 LKEFSE-DGSILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKE 980
Query: 953 VRILRLITTDSVEE 966
V+I R I +VEE
Sbjct: 981 VKIRRFIVKGTVEE 994
>At5g43530 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1277
Score = 92.4 bits (228), Expect = 4e-18
Identities = 80/322 (24%), Positives = 143/322 (43%), Gaps = 61/322 (18%)
Query: 534 GILADEMGLGKTIQSISLI----------------SYLYEIKNERQPF------------ 565
GILAD MGLGKT+ +I+LI + + K R+
Sbjct: 683 GILADAMGLGKTVMTIALILARPGRGNPENEDVLVADVNADKRNRKEIHMALTTVKAKGG 742
Query: 566 -LVIVPLSTITNWTIEFEKWAP--SLRTIVYKGNPNQRKALQHTIKMGNFDVVLTTYEYI 622
L+I P++ ++ W E E + ++ +VY G A + + DVVLTTY +
Sbjct: 743 TLIICPMALLSQWKDELETHSKPDTVSVLVYYGGDRTHDAKA----IASHDVVLTTYGVL 798
Query: 623 IKD------RPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNN 676
+ + DW +++DE H +K+ +++ + T + R LTGTPLQN
Sbjct: 799 TSAYKQDMANSIFHRIDWYRIVLDEAHTIKSWKTQAAKA-TFELSSHCRWCLTGTPLQNK 857
Query: 677 LPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPF 736
L +L++LL F+ + + + + + P+ N ++ + +LRP
Sbjct: 858 LEDLYSLLCFLHVEPWCNWAWWSKLIQKPYENGDPRG------------LKLIKAILRPL 905
Query: 737 LLRRLKKEVEK------DLPDKVEKVVKCKLSSLQQQLYEQMLKHNAF-FIGAGTEGATK 789
+LRR K+ +K +LP +V++C+ S ++ Y + K + F +G
Sbjct: 906 MLRRTKETRDKEGSLILELPPTDVQVIECEQSEAERDFYTALFKRSKVQFDQFVAQGKVL 965
Query: 790 AGIKGLNNKVMQLRKICNHPFV 811
+ +++LR+ CNHPF+
Sbjct: 966 HNYANILELLLRLRQCCNHPFL 987
Score = 91.7 bits (226), Expect = 7e-18
Identities = 55/139 (39%), Positives = 78/139 (55%), Gaps = 3/139 (2%)
Query: 830 YRVSGKFELLDRVLPKFK--ASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAE 887
++ S K L + L K K SG + ++F Q T +D++E LR R +++R DG +
Sbjct: 1105 WKESSKVSELLKCLEKIKKSGSGEKSIVFSQWTSFLDLLEIPLRRRGFEFLRFDGKLAQK 1164
Query: 888 DRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRI 947
R +LK FN + L+S +AGG+GLNL A +V + D WNP + QA R HRI
Sbjct: 1165 GREKVLKEFNETKQKTI-LLMSLKAGGVGLNLTAASSVFLMDPWWNPAVEEQAIMRIHRI 1223
Query: 948 GQKNEVRILRLITTDSVEE 966
GQK V + R I D+VEE
Sbjct: 1224 GQKRTVFVRRFIVKDTVEE 1242
>SPAC17A2.12 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 897
Score = 91.3 bits (225), Expect = 9e-18
Identities = 84/327 (25%), Positives = 148/327 (44%), Gaps = 37/327 (11%)
Query: 512 TLKEYQLKGLEWMVSL-YNNHLNGILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVP 570
+L +Q++G WM S+ ++ G++AD+MGLGKTIQ+I+L+ R+ L++V
Sbjct: 249 SLLPHQVEGHAWMESMEQSSKCGGVMADDMGLGKTIQTIALLLTQKSQDPLRKTNLIVVS 308
Query: 571 LSTITNWTIEFE-KWAPSLRTIVYKGNPNQRKALQHTIKMGNFDVVLTTYE---YIIKDR 626
++ + W E K PS + VY + + +K L + ++ +DVVLTTY Y +K
Sbjct: 309 VALLHQWAEELSTKVHPSKKLSVYIHHGSTKKNLD-SYELSQYDVVLTTYSMLAYEMKQN 367
Query: 627 PL----------------LAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTG 670
L + W +++DE H ++N + L+ K R L+G
Sbjct: 368 DAFNNNNPATATPPPACSLLETSWYRIVLDEAHTIRN-RDTLAAKCCVKLDAKYRWCLSG 426
Query: 671 TPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLH 730
TP+QN++ E ++LL F+ K + F + + P + ++RL
Sbjct: 427 TPIQNHIDEFYSLLKFLRIKPYCVWSLFAKDISRPLKS--------YRADIVEAALKRLR 478
Query: 731 KVLRPFLLRRLKKEVEK-----DLPDKVEKVVKCKLSSLQQQLY-EQMLKHNAFFIGAGT 784
+L + RR K+ +LP K + V L ++ LY EQM +
Sbjct: 479 ILLASTVFRRTKETRVNNLPIVNLPPKTIRTVSVNLLPEERALYNEQMSSAQSLVDNYFN 538
Query: 785 EGATKAGIKGLNNKVMQLRKICNHPFV 811
+ L +++LR+ C HP++
Sbjct: 539 NDHDLSRYGFLLVSLLRLRQFCCHPWL 565
Score = 82.0 bits (201), Expect = 6e-15
Identities = 43/124 (34%), Positives = 74/124 (59%), Gaps = 1/124 (0%)
Query: 852 RVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTR 911
++L++ Q +Q + ++ L++ +++++R DG A R L FN D + L+S +
Sbjct: 743 KILVYSQFSQYLCLVSHMLKLENIRHVRYDGTMSANQRQKSLHSFNN-DKDVLVMLVSLK 801
Query: 912 AGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILER 971
AG +GLNL A+ VI+ + +NP + QA DR HR+GQ+ V + R IT D++EE I+
Sbjct: 802 AGSVGLNLTIANHVILQEPFYNPSIEDQAIDRVHRLGQQKPVTVYRFITKDTIEERIVSV 861
Query: 972 AMQK 975
+K
Sbjct: 862 QRKK 865
>YLR032w [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1169
Score = 90.9 bits (224), Expect = 1e-17
Identities = 91/365 (24%), Positives = 158/365 (42%), Gaps = 68/365 (18%)
Query: 534 GILADEMGLGKTIQSISLI-----------SYLYEIKN-------------ERQPF---- 565
GIL+DEMGLGKT+ + SL+ L++I+N ++P+
Sbjct: 528 GILSDEMGLGKTVAAYSLVLSCPHDSDVVDKKLFDIENTAVSDNLPSTWQDNKKPYASKT 587
Query: 566 -LVIVPLSTITNWTIEFEKWAPS---LRTIVYKGNPNQRKALQHTIKMGNFDVVLTTY-- 619
L++VP+S +T W+ EF K S + Y GN + K L K VVLTTY
Sbjct: 588 TLIVVPMSLLTQWSNEFTKANNSPDMYHEVYYGGNVSSLKTLLTKTKTPP-TVVLTTYGI 646
Query: 620 ---EYIIKDRPLLAKHD-----------WAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNR 665
E+ + + D + +IIDEGH ++N + S + + K +
Sbjct: 647 VQNEWTKHSKGRMTDEDVNISSGLFSVNFYRIIIDEGHNIRNRTTVTSKAVM-ALQGKCK 705
Query: 666 LILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXV 725
+LTGTP+ N L +L++L+ F+ + + + +TPF +
Sbjct: 706 WVLTGTPIINRLDDLYSLVKFLELDPWRQINYWKTFVSTPFESKNYKQAFDV-------- 757
Query: 726 IRRLHKVLRPFLLRRLKKEVEKD------LPDKVEKVVKCKLSSLQQQLYEQMLKHNAFF 779
++ +L P LLRR K+ +KD LP K + + S Q LY+ +L
Sbjct: 758 ---VNAILEPVLLRRTKQMKDKDGKPLVELPPKEVVIKRLPFSKSQDLLYKFLLDKAEVS 814
Query: 780 IGAG-TEGATKAGIKGLNNKVMQLRKICNHPFVFDEVENVINPTRENSSILYRVSGKFEL 838
+ +G G + +++LR++C HP + + +N+ ++ + + +
Sbjct: 815 VKSGIARGDLLKKYSTILVHILRLRQVCCHPGLIGSQDENDEDLSKNNKLVTEQTVELDS 874
Query: 839 LDRVL 843
L RV+
Sbjct: 875 LMRVV 879
Score = 84.0 bits (206), Expect = 2e-15
Identities = 52/136 (38%), Positives = 77/136 (56%), Gaps = 5/136 (3%)
Query: 848 ASGHRVLMFFQMTQVMDIMEDFLR---MRDL-KYMRLDGGTKAEDRTGMLKLFNAPD-SE 902
++G +V++F Q + +DI+E L +D+ K + DG ++RT +L F D S
Sbjct: 1010 SAGEQVVIFSQFSTYLDILEKELTHTFSKDVAKIYKFDGRLSLKERTSVLADFAVKDYSR 1069
Query: 903 YFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTD 962
LLS +AGG+GLNL A + D W+P + QA DR HRIGQ N V+++R I D
Sbjct: 1070 QKILLLSLKAGGVGLNLTCASHAYMMDPWWSPSMEDQAIDRLHRIGQTNSVKVMRFIIQD 1129
Query: 963 SVEEVILERAMQKLDI 978
S+EE +L +K I
Sbjct: 1130 SIEEKMLRIQEKKRTI 1145
>Hs21071052 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1009
Score = 88.2 bits (217), Expect = 8e-17
Identities = 74/283 (26%), Positives = 133/283 (46%), Gaps = 37/283 (13%)
Query: 557 EIKNERQPFLVIVPLSTITNWTIEFEKWAPS---LRTIVYKGNPNQRKALQHTIKMGNFD 613
+++ + L+I PLS ++NW +F + S L VY G P++ ++ + D
Sbjct: 470 DVEERPRTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYG-PDR---IREPALLSKQD 525
Query: 614 VVLTTY-----EYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLIL 668
+VLTTY +Y K L W +I+DEGH ++N ++ + + +++ R +L
Sbjct: 526 IVLTTYNILTHDYGTKGDSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDL-ESERRWVL 584
Query: 669 TGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRR 728
TGTP+QN+L +LW+LL+F+ K F + + P +RR
Sbjct: 585 TGTPIQNSLKDLWSLLSFLKLKPFIDREWWHRTIQRP------------VTMGDEGGLRR 632
Query: 729 LHKVLRPFLLRRLKKEVEK-----DLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIG-- 781
L +++ LRR K K +LP++ + LS ++++Y+ + IG
Sbjct: 633 LQSLIKNITLRRTKTSKIKGKPVLELPERKVFIQHITLSDEERKIYQSVKNEGRATIGRY 692
Query: 782 --AGTEGATKAGIKGLNNKVMQLRKICNHPFVFDEVENVINPT 822
GT A A + GL +++LR+IC H ++ + P+
Sbjct: 693 FNEGTVLAHYADVLGL---LLRLRQICCHTYLLTNAVSSNGPS 732
Score = 84.0 bits (206), Expect = 2e-15
Identities = 57/179 (31%), Positives = 83/179 (45%), Gaps = 8/179 (4%)
Query: 816 ENVINPTRENSSILYRVSGKFELLDRVLPKFKASGHRV--LMFFQMTQVMDIMEDFLRMR 873
E + + + S + + S K L L + + L+ Q T + ++E L+
Sbjct: 815 EELARDSEKKSDMEWTSSSKINALMHALTDLRKKNPNIKSLVVSQFTTFLSLIEIPLKAS 874
Query: 874 DLKYMRLDGGTKAEDRTGMLKLF-NAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDW 932
+ RLDG + R ++ F N LLS +AGG+GLNL A V + D W
Sbjct: 875 GFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNLSAASRVFLMDPAW 934
Query: 933 NPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNK 991
NP + Q DR HR+GQK EV I + I DSVEE +L K+ + + AG F K
Sbjct: 935 NPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENML-----KIQNKKRELAAGAFGTK 988
>CE17314 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 1359
Score = 87.4 bits (215), Expect = 1e-16
Identities = 106/409 (25%), Positives = 174/409 (41%), Gaps = 81/409 (19%)
Query: 414 ERTAKQRLAALKSNDEEAYLKLLDQTKDTRITHLLKQTNSFLDSLAQAVRVQQNEVRIKR 473
ER K+R L+ +E +L++ +D +T +L T+S Q+ +
Sbjct: 392 ERAEKERRKRLEKKQKEFNGIVLEEGED--LTEMLTGTSS-----------QRKLKSVVL 438
Query: 474 GEEIPPITDEEREKIDYYEVSHRIKETVDKQPSILVGGTLKEYQLKGLEWMVSLYNNHLN 533
+ + +E ++ ++ + RI LK +Q G+++M L+
Sbjct: 439 DPDSSTVDEESKKPVEVHNSLVRI---------------LKPHQAHGIQFMYDCAFESLD 483
Query: 534 --------GILADEMGLGKTIQSISLISYLY---EIKNERQPFLVIVPLSTITNWTIEFE 582
GILA MGLGKT+Q I+ + + +I + + LV+VP + I NW EF+
Sbjct: 484 RLDTEGSGGILAHCMGLGKTLQVITFLHTVLMHEKIGEKCKRVLVVVPKNVIINWFKEFQ 543
Query: 583 KWA----PSLRTI------VYKGNPNQRKALQ--HTIKMGNFDVV-------LTTYEYII 623
KW L TI YK ++R+AL+ H+ K + ++ LT +
Sbjct: 544 KWLVDNDEELDTIDVNELDSYKTIEDRRRALKAWHSSKTPSVMIIGYDLFRILTVEDDPK 603
Query: 624 KDRPL-------LAKHDWAH---------MIIDEGHRMKNAQSKLSYTLTHYYKTKNRLI 667
K +P AK D+ ++ DE H++KN S LS + TK R+
Sbjct: 604 KKKPKNRNRRLEKAKEDFRKYLQNPGPDMVVCDEAHKLKNDDSALSKCMVKIL-TKRRIC 662
Query: 668 LTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIR 727
LTGTPLQNNL E ++NFV P + + F F N G + R
Sbjct: 663 LTGTPLQNNLMEYHCMVNFVKPGLLGTKTEFANRF-VNIINRG--RTKDASPLEVSFMKR 719
Query: 728 RLHKV---LRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQML 773
R H + L+ + R+ + + + +P K E V+ + + Q LY L
Sbjct: 720 RCHVLYDHLKKCVDRKDYRVLTEAIPPKQEYVINVRQTERQCALYNAFL 768
Score = 75.5 bits (184), Expect = 5e-13
Identities = 52/181 (28%), Positives = 82/181 (44%), Gaps = 27/181 (14%)
Query: 830 YRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLR------------------ 871
+ +S K LL ++ K + G ++L+F Q + + +++ L
Sbjct: 943 FALSNKLILLVEIIKKCEEIGDKLLVFSQSLESLTLIKRMLEYMAGTGQWFADGHEALNA 1002
Query: 872 --------MRDLKYMRLDGGTKAEDRTGMLKLFNAP-DSEYFCFLLSTRAGGLGLNLQTA 922
+ YM +DG ++ R + FN P + L+STRAG LG N+ A
Sbjct: 1003 EGEETWSWLEGEDYMTIDGSVQSGKRDAVQTSFNDPLNLRARLMLISTRAGSLGTNMVAA 1062
Query: 923 DTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKV 982
+ VIIFD WNP D Q+ R +R GQ V I R I ++EE I +R + K +V
Sbjct: 1063 NRVIIFDACWNPSHDTQSLFRVYRFGQTKPVYIYRFIAQGTMEERIYKRQVTKESTSMRV 1122
Query: 983 I 983
+
Sbjct: 1123 V 1123
>At5g05130 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 881
Score = 86.3 bits (212), Expect = 3e-16
Identities = 46/126 (36%), Positives = 74/126 (58%), Gaps = 1/126 (0%)
Query: 854 LMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPD-SEYFCFLLSTRA 912
++F Q +++ ++E L+ +RLDG + RT ++ F P+ + L S +A
Sbjct: 729 VVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEFGNPELTGPVVLLASLKA 788
Query: 913 GGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERA 972
G G+NL A V +FD WNP + QA DR HRIGQK EV+++R+I +S+EE +LE
Sbjct: 789 SGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARNSIEERVLELQ 848
Query: 973 MQKLDI 978
+K ++
Sbjct: 849 QKKKNL 854
Score = 73.6 bits (179), Expect = 2e-12
Identities = 76/342 (22%), Positives = 135/342 (39%), Gaps = 98/342 (28%)
Query: 534 GILADEMGLGKTIQSISLISY--------------------------------------- 554
G+ AD+MGLGKT+ +SLI++
Sbjct: 281 GVFADDMGLGKTLTLLSLIAFDRYGNASTSTPTEEPLDGEGDKIEKKGKKRGRGKSSESV 340
Query: 555 ---------LYEIKNERQPFLVIVPLSTITNWTIEFEKWAPS--LRTIVYKGNPNQRKAL 603
+ + ++ L++ P S I+ W + E+ L+ +Y G +
Sbjct: 341 TRKKLKTDDVVGMNVSQKTTLIVCPPSVISAWITQLEEHTVPGILKVYMYHGG----ERT 396
Query: 604 QHTIKMGNFDVVLTTY-----EYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTH 658
++ +D+VLTTY E +D P+ K +W +I+DE H +KNA ++ S +
Sbjct: 397 DDVNELMKYDIVLTTYGTLAVEESWEDSPV-KKMEWLRIILDEAHTIKNANAQQSRVVCK 455
Query: 659 YYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXX 718
K R +TGTP+QN +L++L+ F+ + F+ + P
Sbjct: 456 -LKASRRWAVTGTPIQNGSFDLYSLMAFLRFEPFSIKSYWQSLIQRPLGQGNKKG----- 509
Query: 719 XXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAF 778
+ RL ++ LRR K++ LP K + +LS ++QLY+ M
Sbjct: 510 -------LSRLQVLMATISLRRTKEKSLIGLPPKTVETCYVELSPEERQLYDHM------ 556
Query: 779 FIGAGTEGATKAGIKGLNNK-------------VMQLRKICN 807
EG K ++ L N +++LR++C+
Sbjct: 557 ------EGEAKGVVQNLINNGSLMRNYSTVLSIILRLRQLCD 592
>YOR191w [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1619
Score = 85.9 bits (211), Expect = 4e-16
Identities = 53/173 (30%), Positives = 94/173 (53%), Gaps = 4/173 (2%)
Query: 816 ENVINPTRENSSILYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMR-D 874
+NV P E+ ++ +++ RV + ++ ++++F Q T +I+E FL+ + +
Sbjct: 1429 KNVYVPNFESLEPSTKIEQCIQVIQRVFDE--SATEKIIIFSQFTTFFEILEHFLKNKLN 1486
Query: 875 LKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNP 934
Y++ G A+ R+ ++ F D E L+S +AG GL L A+ V+I D WNP
Sbjct: 1487 FPYLKYIGSMNAQRRSDVINEFYR-DPEKRILLISMKAGNSGLTLTCANHVVIVDPFWNP 1545
Query: 935 HQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGK 987
+ + QAQDR +RI Q +V++ +L DSVE+ I E +K ++ + GK
Sbjct: 1546 YVEEQAQDRCYRISQTKKVQVHKLFIKDSVEDRISELQKRKKEMVDSAMDPGK 1598
Score = 84.0 bits (206), Expect = 2e-15
Identities = 77/347 (22%), Positives = 147/347 (42%), Gaps = 63/347 (18%)
Query: 513 LKEYQLKGLEWMVSLYNN-HLNGILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPL 571
L ++Q GL W++ + N+ G+LAD+MGLGKTIQ+I+L+ +++ + L++ P+
Sbjct: 943 LLKHQRLGLHWLLQVENSAKKGGLLADDMGLGKTIQAIALMLANRSEESKCKTNLIVAPV 1002
Query: 572 STITNWTIEFE---KWAPSLRTIVYKGNPNQRKALQHTIKMGNFDVVLTTYEYIIKDRPL 628
S + W E E K T ++ G+ N + ++H + +D VL +Y+ + +
Sbjct: 1003 SVLRVWKGELETKVKKRAKFTTFIFGGSGNGK--VKHWRDLARYDAVLVSYQTLANE--- 1057
Query: 629 LAKH---------------------------------------DWAHMIIDEGHRMKNAQ 649
KH + +++DEG +KN
Sbjct: 1058 FKKHWPKKLDGEQNQLPAVPHIQALNRLKTSNEYYSPFFCNDSTFYRILLDEGQNIKNKN 1117
Query: 650 ---SKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPF 706
SK T+ Y R +L+GTP+QN++ EL++L+ F+ ++ + F F
Sbjct: 1118 TRASKACCTINGMY----RWVLSGTPIQNSMDELYSLIRFLRIPPYHKEQRFKLDIGRFF 1173
Query: 707 ANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEK-----DLPDKVEKVVKCKL 761
+R++ +L +LRR K + +LP K+ +V + +L
Sbjct: 1174 QRN---KQYQYDNEDRKNALRKVRVLLNAIMLRRSKADKIDGKPLLELPPKIVEVDESRL 1230
Query: 762 SSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKVMQLRKICNH 808
+ + Y + N +T+ + +++LR+ C H
Sbjct: 1231 KGEELKFYTALESKNQALAKKLLNNSTRGSYSSVLTLLLRLRQACCH 1277
>7291744 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily
Length = 1534
Score = 85.9 bits (211), Expect = 4e-16
Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 8/161 (4%)
Query: 613 DVVLTTYEYIIKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTP 672
D++ YE ++K P L +I DEGHR+KN+ + +S L +T+ R++LTG P
Sbjct: 542 DLMNLVYEALVKPGPDL-------VICDEGHRIKNSHAGISLALKEI-RTRRRIVLTGYP 593
Query: 673 LQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKV 732
LQNNL E W +++FV P + F F P N LH +
Sbjct: 594 LQNNLLEYWCMVDFVRPNYLGTRTEFCNMFERPIQNGQCVDSTPDDIKLMRYRAHVLHSL 653
Query: 733 LRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQML 773
L F+ RR ++ LP K E V+ K+++ Q++LY+ +
Sbjct: 654 LLGFVQRRSHTVLQLTLPQKYEYVILVKMTAFQRKLYDTFM 694
>At1g11100 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1227
Score = 84.7 bits (208), Expect = 9e-16
Identities = 55/167 (32%), Positives = 85/167 (49%), Gaps = 8/167 (4%)
Query: 815 VENVINPTRENSSILYRVSGKFEL-----LDRVLPKFKASGHRVLMFFQMTQVMDIMEDF 869
V N +N + EN ++ F L V +G + ++F Q T+++D++E
Sbjct: 1032 VMNDVNQSSENGENNQQLDKSFSLPATPAKSSVGGVVNVAGEKAIVFTQWTKMLDLLEAG 1091
Query: 870 LRMRDLKYMRLDGGTKAEDRTGMLKLFNA-PDSEYFCFLLSTRAGGLGLNLQTADTVIIF 928
L+ ++Y R DG R ++ FN PD ++S +A LGLN+ A VI+
Sbjct: 1092 LKSSGIQYRRFDGKMTVPARDAAVQDFNTLPDVSVM--IMSLKAASLGLNMVAACHVIML 1149
Query: 929 DTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQK 975
D WNP + QA DRAHRIGQ V+++R D+VE+ IL +K
Sbjct: 1150 DLWWNPTTEDQAIDRAHRIGQTRPVKVVRFTVKDTVEDRILALQQKK 1196
Score = 77.0 bits (188), Expect = 2e-13
Identities = 80/368 (21%), Positives = 145/368 (38%), Gaps = 78/368 (21%)
Query: 505 PSILVGGTLKEYQLKGLEWMVSLY---NNHLNGILADEMGLGKTIQSISLI--------- 552
P ++ +L +Q L WM N GILAD+ GLGKT+ +I+LI
Sbjct: 534 PDGVLAVSLLRHQRIALSWMSQKETSGNPCFGGILADDQGLGKTVSTIALILTERSTPYL 593
Query: 553 --------------SYLYEIKNERQPF---------------LVIVPLSTITNWTIEFEK 583
+ + NE + L++ P S + W E K
Sbjct: 594 PCEEDSKNGGCNQSDHSQVVFNENKVVEDSLCKMRGRPAAGTLIVCPTSLMRQWADELRK 653
Query: 584 WAP---SLRTIVYKGNPNQRKALQHTIKMGNFDVVLTTYEYIIKDRPL-----------L 629
L +VY G + + + +DVV+TTY + K + + L
Sbjct: 654 KVTLEAHLSVLVYHGCSRTKDPHE----LAKYDVVITTYSLVSKRKHMDCEPVEFLSGPL 709
Query: 630 AKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLP 689
A+ W +++DE +KN +++ S + + K R L+GTP+QN++ +L++ F+
Sbjct: 710 AQVSWFRVVLDEAQSIKNYKTQASIACSGLH-AKRRWCLSGTPIQNSIADLYSYFRFLKY 768
Query: 690 KIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEK-- 747
++S +TF E P ++ + L +L+ +LRR K +
Sbjct: 769 DPYSSYQTFCETIKNPISSYPGEG------------YKTLQAILKKVMLRRTKDTLLDGK 816
Query: 748 ---DLPDKVEKVVKCKLSSLQQQLYEQM-LKHNAFFIGAGTEGATKAGIKGLNNKVMQLR 803
LP K ++ + + ++ Y ++ F G K + +++LR
Sbjct: 817 PVISLPPKSIELRRVDFTKEERDFYSKLECDSRDQFKEYAEAGTVKQNYVNILLMLLRLR 876
Query: 804 KICNHPFV 811
+ C HP +
Sbjct: 877 QACGHPLL 884
>Hs19923174 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 1162
Score = 83.6 bits (205), Expect = 2e-15
Identities = 90/345 (26%), Positives = 148/345 (42%), Gaps = 79/345 (22%)
Query: 516 YQLKGLEWMVSLYNNH-LNGILADEMGLGKTIQSISLI--SYLYEIKNERQP-------- 564
+Q + L W++ + GILAD+MGLGKT+ I+LI E K E++
Sbjct: 573 HQKQALAWLLWRESQKPQGGILADDMGLGKTLTMIALILTQKNQEKKEEKEKSTALTWLS 632
Query: 565 -----------FLVIVPLSTITNWTIEFEKWAPS--LRTIVYKGNPNQRKALQHTIKMGN 611
L+I P S I +W E EK S LR +Y G PN+ + +
Sbjct: 633 KDDSCDFTSHGTLIICPASLIHHWKNEVEKRVNSNKLRVYLYHG-PNRDSRAR---VLST 688
Query: 612 FDVVLTTYEYIIKDRPL--------------------LAKHDWAHMIIDEGHRMKNAQSK 651
+D+V+TTY + K+ P L + WA +I+DE H +KN + +
Sbjct: 689 YDIVITTYSLVAKEIPTNKQEAEIPGANLNVEGTSTPLLRIAWARIILDEAHNVKNPRVQ 748
Query: 652 LSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGX 711
S + + R +TGTP+QNNL ++++LL F+ F+ + + G
Sbjct: 749 TSIAVCK-LQACARWAVTGTPIQNNLLDMYSLLKFLRCSPFDEFNLWRSQVDNGSKKGG- 806
Query: 712 XXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKD------LPDKVEKVVKCKLSSLQ 765
RL + + LLRR K +++ LP + ++ KLS +
Sbjct: 807 ---------------ERLSILTKSLLLRRTKDQLDSTGRPLVILPQRKFQLHHLKLSEDE 851
Query: 766 QQLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKVMQLRKICNHPF 810
+ +Y N FF A + A ++ +K ++ Q + N+PF
Sbjct: 852 ETVY------NVFF--ARSRSALQSYLKRHESRGNQSGRSPNNPF 888
Score = 73.9 bits (180), Expect = 2e-12
Identities = 41/136 (30%), Positives = 73/136 (53%), Gaps = 1/136 (0%)
Query: 848 ASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFL 907
++ + ++ Q T ++ ++ L+ L Y +DG + R +++ FN L
Sbjct: 1007 SASQKSVIVSQWTNMLKVVALHLKKHGLTYATIDGSVNPKQRMDLVEAFNHSRGPQV-ML 1065
Query: 908 LSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEV 967
+S AGG+GLNL + + + D WNP + QA DR +R+GQ+ +V I R + +VEE
Sbjct: 1066 ISLLAGGVGLNLTGGNHLFLLDMHWNPSLEDQACDRIYRVGQQKDVVIHRFVCEGTVEEK 1125
Query: 968 ILERAMQKLDIDGKVI 983
IL+ +K D+ +V+
Sbjct: 1126 ILQLQEKKKDLAKQVL 1141
>At1g05480 [L] KOG0390 DNA repair protein SNF2 family
Length = 588
Score = 82.4 bits (202), Expect = 4e-15
Identities = 125/528 (23%), Positives = 211/528 (39%), Gaps = 101/528 (19%)
Query: 509 VGGTLKEYQLKGLEWMVSLYNNHLNG--ILADEMGLGKTIQSISLISYLYEIKNERQPFL 566
+ GT+ +LK E N+ G I++ G GKT +I + + + +P +
Sbjct: 16 LAGTIMLNELKDFE------NSDETGGCIMSHAPGTGKTRLTIIFLQAYLQCFPDCKP-V 68
Query: 567 VIVPLSTITNWTIEFEKWAPS-----LRTIVYKGNPN--------QRKALQHTIKMGNFD 613
+I P S + W EF+KW S L ++ + G N Q+ A T + N
Sbjct: 69 IIAPASLLLTWAEEFKKWNISIPFHNLSSLDFTGKENSAALGLLMQKNA---TARSNNEI 125
Query: 614 VVLTTYEYI------------------IKDRPLLAK-----------HDWAH-------- 636
++ Y +I +KD K D
Sbjct: 126 RMVKIYSWIKSKSILGISYNLYEKLAGVKDEDKKTKMVREVKPDKELDDIREILMGRPGL 185
Query: 637 MIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSK 696
+++DE H +N +S + TL+ +T+ R++L+GTP QNN EL +L PK
Sbjct: 186 LVLDEAHTPRNQRSCIWKTLSKV-ETQKRILLSGTPFQNNFLELCNVLGLARPKYL---- 240
Query: 697 TFDEWFNTPFANTGXXXXXXXXXXXXXXV----IRRLHKVLRPFLLRRLKKEVEKDLPDK 752
E + +G + I L V+ PF+ ++ LP
Sbjct: 241 ---ERLTSTLKKSGMTVTKRGKKNLGNEINNRGIEELKAVMLPFVHVHKGSILQSSLPGL 297
Query: 753 VEKVVKCKLSSLQQQLYEQM-LKHNAFFIGAGTEGATKAGIKGLNN------KVMQLRKI 805
E VV LQ+++ E + + HN E K + ++ K+ + ++
Sbjct: 298 RECVVVLNPPELQRRVLESIEVTHNRKTKNV-FETEHKLSLVSVHPSLVSRCKISEKERL 356
Query: 806 CNHPFVFDEVENV-INPTRENSSILYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMD 864
+ +++ V ++P N S+ R +F L V+ + +VL+F Q +
Sbjct: 357 SIDEALLAQLKKVRLDP---NQSVKTRFLMEFVELCEVIKE------KVLVFSQYIDPLK 407
Query: 865 IMEDFLRMR-------DLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGL 917
++ L R ++ YM G + + R ++ FN P S+ FL ST+A G+
Sbjct: 408 LIMKHLVSRFKWNPGEEVLYMH--GKLEQKQRQTLINEFNDPKSKAKVFLASTKACSEGI 465
Query: 918 NLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVE 965
+L A VI+ D WNP + QA RA+RIGQK V L+ + E
Sbjct: 466 SLVGASRVILLDVVWNPAVERQAISRAYRIGQKRIVYTYHLVAKGTPE 513
>Hs22048060 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 122
Score = 82.0 bits (201), Expect = 6e-15
Identities = 37/73 (50%), Positives = 51/73 (69%)
Query: 535 ILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYK 594
ILADEMGLGKTIQ IS +SYL+ + PFL++VPLST+T+W EFE W + +VY
Sbjct: 33 ILADEMGLGKTIQVISFLSYLFNVHQLYGPFLIVVPLSTMTSWQREFEAWDSKMNVVVYI 92
Query: 595 GNPNQRKALQHTI 607
G+ N R ++ ++
Sbjct: 93 GDINSRNSVHRSL 105
>At3g20010 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1047
Score = 81.3 bits (199), Expect = 1e-14
Identities = 66/234 (28%), Positives = 110/234 (46%), Gaps = 19/234 (8%)
Query: 756 VVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKVMQLRKICNHPF--VFD 813
V +CK + ++ + N + G + + GL+ V Q R C+ V D
Sbjct: 788 VPRCKQQLARDVVFSESSLRNCT---SDDSGCSSSHDNGLDRSVFQKRDFCSSKIKAVLD 844
Query: 814 EVENVINPTRENSSILYRVSGKFELLD----------RVLPKFKASGH-RVLMFFQMTQV 862
++++ P NS+ ++ D R+ + G + ++F Q T +
Sbjct: 845 ILQSLSQPDSPNSAQHGQMPSSSRPYDDDDVTIVEPMRLHSSSPSQGAVKTIIFSQWTGM 904
Query: 863 MDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNA-PDSEYFCFLLSTRAGGLGLNLQT 921
+D++E + +++ RLDG R +K F+ PD + L+S +AG LGLN+
Sbjct: 905 LDLVELRILESGIEFRRLDGTMSLAARDRAVKEFSKKPDVKVM--LMSLKAGNLGLNMVA 962
Query: 922 ADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQK 975
A VI+ D WNP + QA DRAHRIGQ V + R+ D+VE+ IL+ +K
Sbjct: 963 ACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKDTVEDRILKLQEEK 1016
Score = 54.7 bits (130), Expect = 1e-06
Identities = 45/190 (23%), Positives = 85/190 (44%), Gaps = 25/190 (13%)
Query: 629 LAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVL 688
L K W +++DE +KN +++++ + + K R L+GTP+QN + +L++ F+
Sbjct: 537 LGKVGWFRIVLDEAQTIKNYRTQMARSCCTL-RAKRRWCLSGTPIQNTIDDLYSYFRFLR 595
Query: 689 PKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEK- 747
+ K+F P + ++L VLR +LRR K +
Sbjct: 596 YDPYAVYKSFYSTIKVPISRNSCQG------------YKKLQAVLRAIMLRRTKGTLLDG 643
Query: 748 ----DLPDKVEKVVKCKLSSLQQQLYEQMLKHN----AFFIGAGTEGATKAGIKGLNNKV 799
+LP KV + + S ++ Y+++ + + AGT A I L +
Sbjct: 644 KPIINLPPKVVNLSQVDFSVAERSFYKKLEADSRSQFKAYADAGTLSQNYANILLL---L 700
Query: 800 MQLRKICNHP 809
++LR+ C+HP
Sbjct: 701 LRLRQACDHP 710
>At1g61140 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1287
Score = 81.3 bits (199), Expect = 1e-14
Identities = 46/129 (35%), Positives = 72/129 (55%), Gaps = 1/129 (0%)
Query: 847 KASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCF 906
K +G + ++F Q T++++++E L ++Y RLDG R ++ FN E
Sbjct: 1127 KVAGEKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTLP-EVTVM 1185
Query: 907 LLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEE 966
++S +A LGLN+ A V++ D WNP + QA DRAHRIGQ V ++R D+VE+
Sbjct: 1186 IMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDTVED 1245
Query: 967 VILERAMQK 975
IL +K
Sbjct: 1246 RILALQQKK 1254
>CE11083 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 1091
Score = 80.9 bits (198), Expect = 1e-14
Identities = 44/153 (28%), Positives = 82/153 (52%), Gaps = 4/153 (2%)
Query: 831 RVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRT 890
++ E+++ ++ K + +V++ Q T V++++E ++ KY + G +DR
Sbjct: 918 KIKNTLEIVENIMEKKE----KVVIVSQWTSVLNLIEIHIKSSGFKYTSITGQVLVKDRQ 973
Query: 891 GMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQK 950
+ FN LLS AGG+GLNL + +++ D WNP + QA DR +R+GQK
Sbjct: 974 ERVDSFNREKGGARVMLLSLAAGGVGLNLTGGNHLVMVDLHWNPALEQQAFDRIYRMGQK 1033
Query: 951 NEVRILRLITTDSVEEVILERAMQKLDIDGKVI 983
+V I RL+T ++E+ ++ K+ + V+
Sbjct: 1034 KDVFIHRLVTKGTIEQRVVMLQKDKVALASSVL 1066
Score = 79.0 bits (193), Expect = 5e-14
Identities = 84/335 (25%), Positives = 134/335 (39%), Gaps = 86/335 (25%)
Query: 513 LKEYQLKGLEWMVSLYNN-HLNGILADEMGLGKTIQSISLISYLYEIKNERQP------- 564
L +Q GL WM GILAD+MGLGKT+ ISLI++ + R+
Sbjct: 471 LMPHQKAGLTWMRWRETQPQPGGILADDMGLGKTLSMISLIAHQKAARRARREDGNDDKD 530
Query: 565 -----------------FLVIVPLSTITNWTIEFEKWAPS--LRTIVYKGNPNQRKALQH 605
L++ P S I W E ++ L T ++ G QR
Sbjct: 531 KEKRKVVKEQGLIPSNGTLIVAPASLIHQWDAEIDRRLDDSVLSTYMFHGTKKQRDI--D 588
Query: 606 TIKMGNFDVVLTTYEYII---------------------------------KDRPLLAKH 632
++ +DVV+TT+ I KD +LA+
Sbjct: 589 ARRLARYDVVITTFNLIANELIEKIRTKSKADDSSDGESDSNHTGIRRAVGKDDSVLAQI 648
Query: 633 DWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIF 692
W+ +I+DE H +KN QS S + +R L+GTP+ NNL +L++L+ F+ + F
Sbjct: 649 CWSRVILDEAHTIKNRQSLASKAVCRL-SAFSRWCLSGTPIHNNLWDLYSLVRFLRIRPF 707
Query: 693 NSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEV-----EK 747
+ K + E + R++ + + LLRR K + +K
Sbjct: 708 SDDKYWKE----------------SIMPMKPIMADRVNLLTKNLLLRRTKDQTCAVTNQK 751
Query: 748 --DLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFI 780
LP K +V + +L + Q YE M++ F+
Sbjct: 752 LVQLPPKNVEVHELELDGDEAQAYEIMMEAAKKFV 786
>SPBC4B4.03 [BK] KOG1827 Chromatin remodeling complex RSC subunit RSC1/Polybromo
and related proteins
Length = 803
Score = 79.7 bits (195), Expect = 3e-14
Identities = 42/114 (36%), Positives = 66/114 (57%), Gaps = 5/114 (4%)
Query: 1230 KRKEEP---PLKDKVEALLALLRELTDPTDEHSRTFI--FERLPSRKEYPDYYKVIEKPV 1284
+RK +P PL ++R++ D R FERLP + +P+YY+ IE+P+
Sbjct: 198 RRKLQPSSKPLSSLEARAKVIMRQVRRYRDGSGRQLFAPFERLPDPRMFPEYYQAIEQPM 257
Query: 1285 ALETITKKLNKKQYQSINEVKSDLETMFNNAKLYNEEGSWVFNDAEALEEFAID 1338
ALE I KKL+K +Y++I + D MF+NAK +N+ S V+ DA+ L+ + D
Sbjct: 258 ALEVIQKKLSKHRYETIEQFVDDFNLMFDNAKSFNDPSSQVYRDADFLKNYLAD 311
>At2g16390 [L] KOG0390 DNA repair protein SNF2 family
Length = 888
Score = 79.0 bits (193), Expect = 5e-14
Identities = 117/512 (22%), Positives = 204/512 (38%), Gaps = 89/512 (17%)
Query: 513 LKEYQLKGLEWMVS-LYNNHLNG-ILADEMGLGKTIQSISLISYLYEIKNERQPFLVIVP 570
+K +Q++G +++ S L + G I+A G GKT IS + + +P LV++P
Sbjct: 350 MKPHQIEGFQFLCSNLVADDPGGCIMAHAPGSGKTFMIISFMQSFLAKYPQAKP-LVVLP 408
Query: 571 LSTITNWTIEFEKW-APSLRTIVYKGNPNQRKALQHTIK---MGNFDVVLTTYEYI---- 622
+ W EF +W + + + + +A Q +I M ++ Y+
Sbjct: 409 KGILPTWKKEFVRWQVEDIPLLDFYSAKAENRAQQLSILKQWMEKKSILFLGYQQFSTIV 468
Query: 623 -------IKDRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQN 675
+ + +L K + +I+DEGH +N + L +L +T +++L+GT QN
Sbjct: 469 CDDTTDSLSCQEILLKVP-SILILDEGHTPRNEDTNLLQSLAQV-QTPRKVVLSGTLYQN 526
Query: 676 NLPELWALLNFVLPKIFN-------------------------SSKTFDEWFNTPFANTG 710
++ E++ +LN V PK S+ FN +T
Sbjct: 527 HVKEVFNILNLVRPKFLKLDTSKSAVKRILAYTPCDVRGRLTGSNSDMASMFNETVEHT- 585
Query: 711 XXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYE 770
VI+ L ++ + +L K + +LP + V LS Q +
Sbjct: 586 --LQKSEDFTVKIKVIQDLREMTKK-VLHYYKGDFLDELPGLADFTVVLNLSPKQLNEVK 642
Query: 771 QMLKHNAFFIGAGTEGATKAGIKGLNNKVMQLRKICNHPF--VFDEVENVINPTRENSSI 828
++ + F + A I HP VF + + ++ T + +
Sbjct: 643 KLRREKRKFKVSAVGSA-----------------IYLHPKLKVFSDKSDDVSDTTMDEMV 685
Query: 829 LYRVSGKFELLDRVLPKF--------KASGHRVLMFFQMTQVMDIMEDFLRMRD-----L 875
K +L + V KF ++G ++L+F Q + +E +
Sbjct: 686 -----EKLDLNEGVKAKFFLNLINLCDSAGEKLLVFSQYLIPLKFLERLAALAKGWKLGK 740
Query: 876 KYMRLDGGTKAEDRTGMLKLFNA-PDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNP 934
+ L G T +E R ++ FN+ PD++ F S +A G G++L A ++I D NP
Sbjct: 741 EVFVLTGNTSSEQREWSMETFNSSPDAKIF--FGSIKACGEGISLVGASRILILDVPLNP 798
Query: 935 HQDLQAQDRAHRIGQKNEVRILRLITTDSVEE 966
QA RA R GQK V RLI S EE
Sbjct: 799 SVTRQAIGRAFRPGQKKMVHAYRLIAGSSPEE 830
>7301208 [BK] KOG1827 Chromatin remodeling complex RSC subunit RSC1/Polybromo
and related proteins
Length = 1654
Score = 78.2 bits (191), Expect = 8e-14
Identities = 39/95 (41%), Positives = 57/95 (59%)
Query: 1239 DKVEALLALLRELTDPTDEHSRTFIFERLPSRKEYPDYYKVIEKPVALETITKKLNKKQY 1298
++ E L A + TDP + +F+ LPS+K YPDYY VIE P+ L I K+ Y
Sbjct: 193 NQYEELFASVMTATDPVGDRLMHRMFQLLPSKKIYPDYYDVIEHPIDLRLIATKIQMNAY 252
Query: 1299 QSINEVKSDLETMFNNAKLYNEEGSWVFNDAEALE 1333
S+ E++ DL M NA L+NE GS ++ DA++L+
Sbjct: 253 SSLAEMERDLLQMTKNACLFNEPGSQIYKDAKSLK 287
Score = 72.8 bits (177), Expect = 3e-12
Identities = 30/90 (33%), Positives = 55/90 (60%)
Query: 1248 LRELTDPTDEHSRTFIFERLPSRKEYPDYYKVIEKPVALETITKKLNKKQYQSINEVKSD 1307
++E +P + + IF +LPS+ EYPDYY +I +P+ ++ I +KL + Y +++++ +D
Sbjct: 652 VKEYQEPKGKRQLSLIFTKLPSKSEYPDYYDIIREPIDMDRIAQKLKQGAYDTLDDLAAD 711
Query: 1308 LETMFNNAKLYNEEGSWVFNDAEALEEFAI 1337
M NA YNE S ++ DA L++ +
Sbjct: 712 FLLMLENACKYNEPDSQIYKDALVLQQLTL 741
Score = 70.1 bits (170), Expect = 2e-11
Identities = 34/91 (37%), Positives = 54/91 (58%), Gaps = 1/91 (1%)
Query: 1244 LLALLRELTDPTDEHSRTF-IFERLPSRKEYPDYYKVIEKPVALETITKKLNKKQYQSIN 1302
+L++ + L D + + R +F P RK YPDYY +I+ P+ + TI + +Y ++
Sbjct: 516 ILSIQKYLVDYSLGNRRPIEMFMEKPPRKIYPDYYDIIQNPIDMNTIEHNIRTDRYAAVE 575
Query: 1303 EVKSDLETMFNNAKLYNEEGSWVFNDAEALE 1333
+V SD MF+N + YNEEGS ++ DA LE
Sbjct: 576 DVVSDYRLMFSNCRQYNEEGSNIYEDANILE 606
Score = 52.0 bits (123), Expect = 6e-06
Identities = 24/69 (34%), Positives = 39/69 (55%)
Query: 1264 FERLPSRKEYPDYYKVIEKPVALETITKKLNKKQYQSINEVKSDLETMFNNAKLYNEEGS 1323
F R+P R++ P YY V+ P+ L + +KL Y ++++ +DLE + NAK + GS
Sbjct: 74 FIRVPKRRQEPSYYDVVVNPIDLLKVQQKLKTDSYDDLDDLMADLELLIGNAKAFYIPGS 133
Query: 1324 WVFNDAEAL 1332
DA +L
Sbjct: 134 SEHQDAVSL 142
>CE14110 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 1026
Score = 77.0 bits (188), Expect = 2e-13
Identities = 67/247 (27%), Positives = 103/247 (41%), Gaps = 62/247 (25%)
Query: 513 LKEYQLKGLEWMVSLYNN-HLNGILADEMGLGKTIQSISLISYLYEIKNERQP------- 564
L +Q GL W+V H GILAD+MGLGKT+ +SLI + + R+
Sbjct: 389 LMPHQKAGLRWLVWREGQPHSGGILADDMGLGKTLSMLSLIVHQKAARRARKESGDNAAD 448
Query: 565 -----------------FLVIVPLSTITNWTIEFEKWAPS--LRTIVYKGNPNQRKALQH 605
L+I P S I W E + S L ++ G QR+
Sbjct: 449 KEKRRVAKEEGLYPSNGTLIIAPASLIHQWEAEINRRLESDLLSVFMFHGTKKQRQI--E 506
Query: 606 TIKMGNFDVVLTTYEYIIKD--------------------------RPL------LAKHD 633
++ +DVV+TTY + RP LA+
Sbjct: 507 PKELARYDVVITTYTLAANELMEKKAAGSKKEEDSDDESENEENPRRPAGKNDSPLARVA 566
Query: 634 WAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFN 693
W+ +I+DE H +KN S+ S + + +R L+GTP+ NNL +L++L+ F+ +F
Sbjct: 567 WSRVILDEAHAIKNRLSQCSKAVCR-LSSFSRWCLSGTPIHNNLWDLYSLVRFLRIPLFG 625
Query: 694 SSKTFDE 700
K + E
Sbjct: 626 DRKFWAE 632
Score = 74.3 bits (181), Expect = 1e-12
Identities = 51/174 (29%), Positives = 88/174 (50%), Gaps = 14/174 (8%)
Query: 821 PTR--ENSSILYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYM 878
PTR E I +++ E++ +L K + +V++ Q T V++++E ++ Y
Sbjct: 829 PTRIFEPDFISCKMAKTLEVVREILEKKE----KVVIVSQWTSVLNLVEKHIQAGGHNYT 884
Query: 879 RLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDL 938
+ G +DR + FN LLS AGG+GLNL + +I+ D WNP +
Sbjct: 885 SITGQVLVKDRQERVDSFNQEKGGAQVMLLSLTAGGVGLNLIGGNHLIMVDLHWNPALEQ 944
Query: 939 QAQDRAHRIGQKNEV--------RILRLITTDSVEEVILERAMQKLDIDGKVIQ 984
QA DR +R+GQK EV + RLI ++E+ +++ +KL + V++
Sbjct: 945 QACDRIYRMGQKKEVFIHRLNISKFCRLIVKGTIEQRVMDLQEKKLALAASVLE 998
>At1g05120 [L] KOG1002 Nucleotide excision repair protein RAD16
Length = 833
Score = 76.6 bits (187), Expect = 2e-13
Identities = 47/125 (37%), Positives = 68/125 (53%), Gaps = 3/125 (2%)
Query: 852 RVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGG-TKAEDRTGMLKLFNAPDSEYFCFLLST 910
+ ++F Q T +D++ L + ++L G T A T + K PD F L+S
Sbjct: 682 KAIVFSQFTSFLDLINYTLGKCGVSCVQLVGSMTMAARDTAINKFKEDPDCRVF--LMSL 739
Query: 911 RAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILE 970
+AGG+ LNL A V + D WNP + QAQDR HRIGQ +R++R I ++VEE IL
Sbjct: 740 KAGGVALNLTVASHVFMMDPWWNPAVERQAQDRIHRIGQYKPIRVVRFIIENTVEERILR 799
Query: 971 RAMQK 975
+K
Sbjct: 800 LQKKK 804
Score = 64.7 bits (156), Expect = 9e-10
Identities = 48/152 (31%), Positives = 75/152 (48%), Gaps = 17/152 (11%)
Query: 480 ITDEEREKIDYYEVSHRIKETVDKQPSILVGGTLKEYQLKGLEWMVSLYNNHLNGILADE 539
I + E +D + + I ET + +++ L YQ + L W + GILADE
Sbjct: 108 IDEHMSEDVDLDQHNAVIAETAEPPSDLIM--PLLRYQKEFLAWATKQEQSVAGGILADE 165
Query: 540 MGLGKTIQSISLISYLYEIKNERQPF-------LVIVPLSTITNWTIEFEKWAP--SLRT 590
MG+GKTIQ+ISL+ E+ +R F LV+ PL ++ W E ++ S +
Sbjct: 166 MGMGKTIQAISLVLARREV--DRAQFGEAAGCTLVLCPLVAVSQWLNEIARFTSPGSTKV 223
Query: 591 IVYKGNPNQRKALQHTIKMGNFDVVLTTYEYI 622
+VY G K ++ + N+D VLTTY +
Sbjct: 224 LVYHG----AKRAKNIKEFMNYDFVLTTYSTV 251
>At3g16600 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 638
Score = 76.3 bits (186), Expect = 3e-13
Identities = 87/382 (22%), Positives = 149/382 (38%), Gaps = 87/382 (22%)
Query: 475 EEIPPITDEEREKIDYYEVSHRIKETV---DKQPSILVGGTLKEYQLKGLEWMVSLYNNH 531
EE+ E++ Y +K+ D P +L L +Q L WM
Sbjct: 13 EEVQEEKTTVNERVIYQAALQDLKQPKTEKDLPPGVLTV-PLMRHQKIALNWMRKKEKRS 71
Query: 532 ---LNGILADEMGLGKTIQSISLISYLYEIKNERQP----------FLVIVPLSTITNWT 578
L GILAD+ GLGKTI +ISLI L ++K++ + L++ P S + W
Sbjct: 72 RHCLGGILADDQGLGKTISTISLI-LLQKLKSQSKQRKRKGQNSGGTLIVCPASVVKQWA 130
Query: 579 IEFEKWAP---SLRTIVYKGNPNQRKALQHTIKMGNFDVVLTTYEYI---IKDRPLLAKH 632
E ++ L +V+ G+ + + I +DVV+TTY + + P+L ++
Sbjct: 131 REVKEKVSDEHKLSVLVHHGSHRTKDPTEIAI----YDVVMTTYAIVTNEVPQNPMLNRY 186
Query: 633 D-------------------------WAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLI 667
D W +++DE H +KN ++ ++ + K R
Sbjct: 187 DSMRGRESLDGSSLIQPHVGALGRVRWLRVVLDEAHTIKNHRTLIA-KACFSLRAKRRWC 245
Query: 668 LTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIR 727
LTGTP++N + +L++ F+ + +F + P +
Sbjct: 246 LTGTPIKNKVDDLYSYFRFLRYHPYAMCNSFHQRIKAPIDKKPLHG------------YK 293
Query: 728 RLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGA 787
+L +LR +LRR K E K+E + K F +G
Sbjct: 294 KLQAILRGIMLRRTK---EWSFYRKLELNSRWK------------------FEEYAADGT 332
Query: 788 TKAGIKGLNNKVMQLRKICNHP 809
+ L +++LR+ CNHP
Sbjct: 333 LHEHMAYLLVMLLRLRQACNHP 354
Score = 63.2 bits (152), Expect = 3e-09
Identities = 34/72 (47%), Positives = 45/72 (62%)
Query: 907 LLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEE 966
L+S +AG LGLN+ A VI+ D WNP + QA DRAHRIGQ V + R+ ++VEE
Sbjct: 511 LMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAIDRAHRIGQTRAVTVTRIAIKNTVEE 570
Query: 967 VILERAMQKLDI 978
IL +K +I
Sbjct: 571 RILTLHERKRNI 582
>At1g50410 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1056
Score = 75.9 bits (185), Expect = 4e-13
Identities = 47/125 (37%), Positives = 71/125 (56%), Gaps = 3/125 (2%)
Query: 852 RVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLF-NAPDSEYFCFLLST 910
+ ++F Q T ++D++E L +++ RLDG R +K F N PD + ++S
Sbjct: 903 KTIIFSQWTGMLDLVELSLIENSIEFRRLDGTMSLIARDRAVKEFSNDPDVKVM--IMSL 960
Query: 911 RAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILE 970
+AG LGLN+ A VI+ D WNP + QA DRAHRIGQ V + R+ ++VE+ IL
Sbjct: 961 KAGNLGLNMIAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKNTVEDRILA 1020
Query: 971 RAMQK 975
+K
Sbjct: 1021 LQEEK 1025
Score = 52.0 bits (123), Expect = 6e-06
Identities = 42/191 (21%), Positives = 81/191 (41%), Gaps = 19/191 (9%)
Query: 625 DRPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQNNLPELWALL 684
D LAK W +++DE +KN +++++ + K R L+GTP+QN + +L++
Sbjct: 537 DSGTLAKVGWFRVVLDEAQTIKNHRTQVARACCGL-RAKRRWCLSGTPIQNTIDDLYSYF 595
Query: 685 NFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXVIRRLHKVLRPFLLRRLKKE 744
F+ + K+F P + ++L VLR +LRR K
Sbjct: 596 RFLKYDPYAVYKSFCHQIKGPISRNSLQG------------YKKLQAVLRAIMLRRTKGT 643
Query: 745 VEK-----DLPDKVEKVVKCKLSSLQQQLYEQMLKHN-AFFIGAGTEGATKAGIKGLNNK 798
+ +LP K + + S ++ Y ++ + + F G +
Sbjct: 644 LLDGQPIINLPPKTINLSQVDFSVEERSFYVKLESDSRSQFKAYAAAGTLNQNYANILLM 703
Query: 799 VMQLRKICNHP 809
+++LR+ C+HP
Sbjct: 704 LLRLRQACDHP 714
>7298962 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 965
Score = 75.1 bits (183), Expect = 7e-13
Identities = 52/151 (34%), Positives = 83/151 (54%), Gaps = 6/151 (3%)
Query: 831 RVSGKFEL-LDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLD--GGTKAE 887
R S K ++ +D++ + ++++ Q + I+ R++DL + LD G A+
Sbjct: 787 RPSAKLKMVIDKLEELLTGTNDKIIVTSQWVSYLAIVRK--RLQDLSWETLDFNGQLTAK 844
Query: 888 DRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRI 947
+R +L+ FNA ++E LLS AGG+GLNL A+ ++I D WNP + QAQDR +R
Sbjct: 845 EREIVLRDFNA-NNEKRVLLLSLTAGGVGLNLNVANHMLIVDLHWNPQLERQAQDRIYRY 903
Query: 948 GQKNEVRILRLITTDSVEEVILERAMQKLDI 978
GQ I R + D+VE+ I KL+I
Sbjct: 904 GQTKPTFIYRYMCQDTVEQRIKSLQDCKLEI 934
Score = 60.8 bits (146), Expect = 1e-08
Identities = 53/230 (23%), Positives = 106/230 (46%), Gaps = 39/230 (16%)
Query: 558 IKNERQPF---LVIVPLSTITNWTIEFEKWAP--SLRTIVYKGNPNQRKALQHTIKMGNF 612
+ N R P LV+ P+S + W E ++R + + G PN+ + + ++
Sbjct: 382 LSNGRYPSANTLVVCPMSVMCQWAHEVASKVAQNAIRVLTFHG-PNRHEIGIEAFR--SY 438
Query: 613 DVVLTTYEYIIKD-------RPLLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNR 665
D+V+T+Y ++ + PL A + W +I+DE H ++N+++ ++ +
Sbjct: 439 DLVITSYNLVVNELKRYGNTSPLFAVY-WNRVILDEAHIIRNSKTNCCNSVCQL-RAHCH 496
Query: 666 LILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXXXXXXXXXXXV 725
LTGTP+QN +++ALL FV F + + + N
Sbjct: 497 WALTGTPVQNRGVDVFALLRFVNVPNFQDLQQWKKNLNESMLGH---------------- 540
Query: 726 IRRLHKVLRPFLLRRLKKEVEKD-----LPDKVEKVVKCKLSSLQQQLYE 770
RRL+ +++P +LRR K++++ LP +++ +LS + +Y+
Sbjct: 541 -RRLNFIIKPLMLRRTKQKLQASGDMPALPSLKIELICVQLSKTEMAVYQ 589
>SPBC1734.15 [BK] KOG1827 Chromatin remodeling complex RSC subunit RSC1/Polybromo
and related proteins
Length = 542
Score = 74.3 bits (181), Expect = 1e-12
Identities = 37/100 (37%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 1239 DKVEALLALLRELTDPTDEHSRTFI--FERLPSRKEYPDYYKVIEKPVALETITKKLNKK 1296
D + + +L L + DE R I F LPS++ YPDYY++I+ P+ ++ + K+ K
Sbjct: 143 DVPKVIQNILDALHEEKDEQGRFLIDIFIDLPSKRLYPDYYEIIKSPMTIKMLEKRFKKG 202
Query: 1297 QYQSINEVKSDLETMFNNAKLYNEEGSWVFNDAEALEEFA 1336
+Y ++ DL MF NAK YN GS+V+ DAE L + +
Sbjct: 203 EYTTLESFVKDLNQMFINAKTYNAPGSFVYEDAEKLSQLS 242
Score = 65.5 bits (158), Expect = 6e-10
Identities = 37/116 (31%), Positives = 62/116 (52%), Gaps = 12/116 (10%)
Query: 1225 DDAPTKRKEEPPLKDKVEALLALLRELTDPTDEHSRTFIFERLPSRKEYPDYYKVIEKPV 1284
DD+ ++ + +EAL+ L +P D+ IFE LPS++ +PDYY++I+KP+
Sbjct: 3 DDSHNAPFDKTKFDEVLEALVGLKDNEGNPFDD-----IFEELPSKRYFPDYYQIIQKPI 57
Query: 1285 ALETITKKLNKKQYQSINEVKSDLETMFNNAKLYNEEGSWVF-------NDAEALE 1333
+ + K +Y S+ + D+ M +NA+ YN GS V+ N A +LE
Sbjct: 58 CYKMMRNKAKTGKYLSMGDFYDDIRLMVSNAQTYNMPGSLVYECSVLIANTANSLE 113
>CE11450 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 518
Score = 70.5 bits (171), Expect = 2e-11
Identities = 39/108 (36%), Positives = 59/108 (54%)
Query: 877 YMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQ 936
Y + G +DR + FN LLS AGG+GLNL + +I+ D WNP
Sbjct: 382 YTSITGEVAIKDRQERVDSFNQEKGGAQDMLLSLTAGGVGLNLIGGNHLIMVDLHWNPAL 441
Query: 937 DLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQ 984
+ QA DR +R+GQK EV I RLI +++E+ ++ +KL + V++
Sbjct: 442 EQQACDRIYRMGQKKEVHIHRLIVKETIEQRVMSLQEKKLALAASVLE 489
Score = 57.4 bits (137), Expect = 2e-07
Identities = 54/183 (29%), Positives = 86/183 (46%), Gaps = 21/183 (11%)
Query: 513 LKEYQLKGLEWMVSLYNN-HLNGILADEMGLGKTIQSISLISYLYEIKNERQPF--LVIV 569
L +Q GL W++ + H GIL +MGLGKT+ ISLI + + R+ I
Sbjct: 144 LMPHQKAGLCWLLWRESQPHSGGILGGDMGLGKTLSMISLIVHQKAARKTRKDAGDDAIA 203
Query: 570 PLSTITNWTIEFEKWAPS--LRTIVYKGNPN--QRKALQHTIKMGNFDVVLTTYEYIIKD 625
P S + +W E + L +VY GN K L+ I++ ++D+ + K
Sbjct: 204 PESLVHHWEAEIARRLKQDLLSVLVYHGNRRHINPKDLKKHIEL-DYDLE-DEHNPCSKL 261
Query: 626 RPL-----------LAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTGTPLQ 674
RP LA+ W+++I+DE H +KN ++ S +R L+GTP+
Sbjct: 262 RPRVCPKADKNSSPLARIAWSYVILDEAHIIKNRNAQCSEAACK-ISAFSRWCLSGTPIH 320
Query: 675 NNL 677
NN+
Sbjct: 321 NNM 323
>Hs20532976 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 293
Score = 69.3 bits (168), Expect = 4e-11
Identities = 62/251 (24%), Positives = 107/251 (41%), Gaps = 29/251 (11%)
Query: 737 LLRRLKKEVEKDLPDKVEKVVKCKLSSLQQQLYEQMLKHNAFFIGAGTEGATKAGIKGLN 796
++RRLK EV LP KV + + L S + + + GA + + GL
Sbjct: 1 MIRRLKTEVLTQLPPKVRQRIPFDLPSAAAKELNTSFEEWEKIMRTPNSGAMET-VMGLI 59
Query: 797 NKVMQLRKICNHPFVFDEVENVINPTRENSSILYRVSGKFELLDRVLPKFKASGHRVLMF 856
++ + I V D ++ ++ +N S+ KF H + M
Sbjct: 60 TRMFKQTAIAKAGAVKDYIKMML----QNDSL----------------KFLVFAHHLSML 99
Query: 857 FQMTQVMDIMEDFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLG 916
T+ ++E+ R Y+R+DG + +R ++ F D + +LS +A G G
Sbjct: 100 QACTEA--VIENKTR-----YIRIDGSVSSSERIHLVNQFQK-DPDTRVAILSIQAAGQG 151
Query: 917 LNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKL 976
L A V+ + W+P QA+DRAHRIGQ + V I LI +++ ++ +K
Sbjct: 152 LTFTAASHVVFAELYWDPGHIKQAEDRAHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKA 211
Query: 977 DIDGKVIQAGK 987
+ G + K
Sbjct: 212 QVTGSTLNGRK 222
>SPAC1952.05 [BK] KOG1472 Histone acetyltransferase SAGA/ADA catalytic subunit
PCAF/GCN5 and related proteins
Length = 454
Score = 68.6 bits (166), Expect = 7e-11
Identities = 34/106 (32%), Positives = 59/106 (55%)
Query: 1230 KRKEEPPLKDKVEALLALLRELTDPTDEHSRTFIFERLPSRKEYPDYYKVIEKPVALETI 1289
K EE K + + A+L L H ++ F + S+++ PDYY+VIE P+ L T+
Sbjct: 334 KEMEELSKKPRPKPFFAVLEMLFTEMQNHPSSWPFMQPVSKEDVPDYYEVIEHPMDLSTM 393
Query: 1290 TKKLNKKQYQSINEVKSDLETMFNNAKLYNEEGSWVFNDAEALEEF 1335
+L QY+S+ E D + +F+N + YN+ + + +A+ LE+F
Sbjct: 394 EFRLRNNQYESVEEFIRDAKYIFDNCRSYNDSNTTYYKNADRLEKF 439
>CE24921 [R] KOG1632 Uncharacterized PHD Zn-finger protein
Length = 451
Score = 68.2 bits (165), Expect = 9e-11
Identities = 34/85 (40%), Positives = 51/85 (60%)
Query: 1250 ELTDPTDEHSRTFIFERLPSRKEYPDYYKVIEKPVALETITKKLNKKQYQSINEVKSDLE 1309
EL + EH + F E+PDY K I+KP+ L TITKK+ + +Y +++ +D+
Sbjct: 298 ELLELLLEHRMSTPFRNPVDLNEFPDYEKFIKKPMDLSTITKKVERTEYLYLSQFVNDVN 357
Query: 1310 TMFNNAKLYNEEGSWVFNDAEALEE 1334
MF NAK YN +G+ VF AE ++E
Sbjct: 358 QMFENAKTYNPKGNAVFKCAETMQE 382
>CE15910 [R] KOG1632 Uncharacterized PHD Zn-finger protein
Length = 510
Score = 68.2 bits (165), Expect = 9e-11
Identities = 34/85 (40%), Positives = 51/85 (60%)
Query: 1250 ELTDPTDEHSRTFIFERLPSRKEYPDYYKVIEKPVALETITKKLNKKQYQSINEVKSDLE 1309
EL + EH + F E+PDY K I+KP+ L TITKK+ + +Y +++ +D+
Sbjct: 357 ELLELLLEHRMSTPFRNPVDLNEFPDYEKFIKKPMDLSTITKKVERTEYLYLSQFVNDVN 416
Query: 1310 TMFNNAKLYNEEGSWVFNDAEALEE 1334
MF NAK YN +G+ VF AE ++E
Sbjct: 417 QMFENAKTYNPKGNAVFKCAETMQE 441
>CE15909 [R] KOG1632 Uncharacterized PHD Zn-finger protein
Length = 405
Score = 68.2 bits (165), Expect = 9e-11
Identities = 34/85 (40%), Positives = 51/85 (60%)
Query: 1250 ELTDPTDEHSRTFIFERLPSRKEYPDYYKVIEKPVALETITKKLNKKQYQSINEVKSDLE 1309
EL + EH + F E+PDY K I+KP+ L TITKK+ + +Y +++ +D+
Sbjct: 252 ELLELLLEHRMSTPFRNPVDLNEFPDYEKFIKKPMDLSTITKKVERTEYLYLSQFVNDVN 311
Query: 1310 TMFNNAKLYNEEGSWVFNDAEALEE 1334
MF NAK YN +G+ VF AE ++E
Sbjct: 312 QMFENAKTYNPKGNAVFKCAETMQE 336
>CE05310 [BK] KOG1827 Chromatin remodeling complex RSC subunit RSC1/Polybromo
and related proteins
Length = 1879
Score = 65.5 bits (158), Expect = 6e-10
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Query: 1225 DDAPTKRKEEPPLKDKVEALLALLRELTDPTDEHSRTFI--FERLPSRKEYPDYYKVIEK 1282
+++ T ++ P+ L LL + + TD R F L SR+++P YY+ I K
Sbjct: 177 EESGTSSRDSTPMDLDHFMLCDLLGAVLEATDNTGRLLCPPFRVLQSREDFPLYYEKIAK 236
Query: 1283 PVALETITKKLNKKQYQSINEVKSDLETMFNNAKLYNEEGSWVFNDAEALE 1333
P+ L+TI + K+Y ++ E+K DL +F NA+ ++ GS +F DAE L+
Sbjct: 237 PIDLKTIAQNGVNKKYSTMKELKDDLFLLFKNAQQFSGNGSDIFKDAEQLK 287
Score = 63.5 bits (153), Expect = 2e-09
Identities = 27/71 (38%), Positives = 48/71 (67%)
Query: 1264 FERLPSRKEYPDYYKVIEKPVALETITKKLNKKQYQSINEVKSDLETMFNNAKLYNEEGS 1323
F +LPS K+YP+YY++I+ P+ ++TI +++ QY ++ + +D MF+NA+ +NE S
Sbjct: 560 FIQLPSAKQYPEYYQIIQNPIDMKTIRMRIDGHQYPQVDAMINDCRVMFSNARDFNEPRS 619
Query: 1324 WVFNDAEALEE 1334
+ DA LE+
Sbjct: 620 MIHMDAIQLEK 630
Score = 62.4 bits (150), Expect = 5e-09
Identities = 32/104 (30%), Positives = 59/104 (55%)
Query: 1235 PPLKDKVEALLALLRELTDPTDEHSRTFIFERLPSRKEYPDYYKVIEKPVALETITKKLN 1294
P + K+ L ++++ + F RLPS++E+P YY VI+KP+ + I KL
Sbjct: 708 PIEEQKMWRLFKSMKDVREEGTNRPLAVNFMRLPSKEEFPAYYDVIKKPMDMMRIKHKLE 767
Query: 1295 KKQYQSINEVKSDLETMFNNAKLYNEEGSWVFNDAEALEEFAID 1338
+QY ++ +V SD M +NA +NE S ++ +A +L++ ++
Sbjct: 768 NRQYVTLLDVVSDFMLMLSNACKFNETDSDIYKEAVSLQKALLE 811
Score = 55.8 bits (133), Expect = 4e-07
Identities = 30/74 (40%), Positives = 44/74 (58%), Gaps = 1/74 (1%)
Query: 1264 FERLPSRKEYPDYYKVIEKPVALETITKKLNKKQYQSINEVKSDLETMFNNAKLYNEEGS 1323
F LPS++ YPDYY I+ PV++ I K+L +Y + + +DL M++NA YN E S
Sbjct: 368 FLELPSKESYPDYYDEIKNPVSIFMINKRLKNGKY-DLKSLVADLMQMYSNAFDYNLESS 426
Query: 1324 WVFNDAEALEEFAI 1337
V+ AE L+ I
Sbjct: 427 EVYISAEKLKALTI 440
>At3g24340 [L] KOG0390 DNA repair protein SNF2 family
Length = 1132
Score = 63.9 bits (154), Expect = 2e-09
Identities = 43/119 (36%), Positives = 60/119 (50%), Gaps = 5/119 (4%)
Query: 852 RVLMFFQMTQVMD-IMEDFLRMRDL----KYMRLDGGTKAEDRTGMLKLFNAPDSEYFCF 906
+VL++ Q + IME + D + + + G + DR M+ FN PDS
Sbjct: 945 KVLVYSQYIDTLKLIMEQLIAECDWTEGEQILLMHGKVEQRDRQHMIDNFNKPDSGSKVL 1004
Query: 907 LLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVE 965
L ST+A G++L A V+I D WNP + QA RA RIGQK V I L+ D+ E
Sbjct: 1005 LASTKACSEGISLVGASRVVILDVVWNPSVESQAISRAFRIGQKRAVFIYHLMVKDTSE 1063
>7302099 [B] KOG1245 Chromatin remodeling complex WSTF-ISWI large subunit
(contains heterochromatin localization PHD and BROMO
domains)
Length = 1476
Score = 63.9 bits (154), Expect = 2e-09
Identities = 34/93 (36%), Positives = 51/93 (54%)
Query: 1246 ALLRELTDPTDEHSRTFIFERLPSRKEYPDYYKVIEKPVALETITKKLNKKQYQSINEVK 1305
A L +L + +H + F R E PDY+++I+ P+ L I KLN YQ E+
Sbjct: 1363 AALYDLLEQIMKHKAAWPFLRPVLTSEVPDYHQIIKTPMDLAKIKSKLNMGAYQLNEELL 1422
Query: 1306 SDLETMFNNAKLYNEEGSWVFNDAEALEEFAID 1338
SD++ +F N LYN EG+ +++ LE F ID
Sbjct: 1423 SDIQLVFRNCDLYNVEGNEIYDAGCQLERFVID 1455
>Hs17441908 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 215
Score = 62.8 bits (151), Expect = 4e-09
Identities = 47/141 (33%), Positives = 68/141 (47%), Gaps = 19/141 (13%)
Query: 540 MGLGKTIQSISLISYLYEIKNERQPFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQ 599
MGLGKTIQ+I I+Y Y+ E P L++VP S WT E EKW P L +P +
Sbjct: 1 MGLGKTIQAIG-ITYFYK---EEWPLLIVVPSSLRYPWTEEIEKWIPEL-------SPEE 49
Query: 600 RKALQHTI---KMGNFDVVLTTYEYIIKDRPLLA----KHDWAHMIIDEGHRMKNAQSKL 652
+Q+ +M V + Y + D L ++ +I+DE H MK+ +
Sbjct: 50 INVIQNKTDVRRMSTSKVTVLGYGLLTADAKTLIDALNNQNFKVVIVDESHYMKSRNATR 109
Query: 653 S-YTLTHYYKTKNRLILTGTP 672
S L K + ++LTGTP
Sbjct: 110 SRILLPIVQKARRAILLTGTP 130
>YGR056w [BK] KOG1827 Chromatin remodeling complex RSC subunit RSC1/Polybromo
and related proteins
Length = 928
Score = 62.4 bits (150), Expect = 5e-09
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 1231 RKEEPPLKD-----KVEALLALLRELTDPTDEHSRTFIFERLPSRKEYPDYYKVIEKPVA 1285
R+ PP+ D +++ +L ++R D ++ + T FE+LP R E P YY VI P+
Sbjct: 226 RRGRPPVIDLPYVLRIKNILKMMRREVDQNNK-TLTLCFEKLPDRNEEPTYYSVITDPIC 284
Query: 1286 LETITKKLNKKQYQSINEVKSDLETMFNNAKLYNEEGSWVFNDAEALEE 1334
L I KK+ ++Y++ + + D + M N KLY + A+ LE+
Sbjct: 285 LMDIRKKVKSRKYRNFHTFEEDFQLMLTNFKLYYSQDQSNIIRAQLLEK 333
Score = 53.9 bits (128), Expect = 2e-06
Identities = 29/73 (39%), Positives = 41/73 (55%), Gaps = 2/73 (2%)
Query: 1263 IFERLPSRKEYPDYYKVIEKPVALETITKKLNKKQYQSINEVKSDLETMFNNAKLYNEEG 1322
IF LP +KEYPDYY +I P++L T+ K+L Y S + +D + NA YN +
Sbjct: 34 IFNVLPPKKEYPDYYIIIRNPISLNTLKKRL--PHYTSPQDFVNDFAQIPWNAMTYNAKD 91
Query: 1323 SWVFNDAEALEEF 1335
S ++ A LE F
Sbjct: 92 SVIYKYAILLESF 104
>At2g34900 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 400
Score = 62.0 bits (149), Expect = 6e-09
Identities = 31/66 (46%), Positives = 43/66 (64%), Gaps = 1/66 (1%)
Query: 1275 DYYKVIEKPVALETITKKLNKKQYQSINEVKSDLETMFNNAKLYNEEGSWVFNDAEA-LE 1333
DYYKVIEKP+ L TI KK+ +Y ++ E+ +D+ +F NA YNEE V+ AE+ LE
Sbjct: 143 DYYKVIEKPMDLGTIKKKMESSEYSNVREIYADVRLVFKNAMRYNEEKEDVYVMAESLLE 202
Query: 1334 EFAIDW 1339
+F W
Sbjct: 203 KFEEKW 208
>SPAC13G6.01c [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 104
Score = 59.7 bits (143), Expect = 3e-08
Identities = 33/81 (40%), Positives = 48/81 (58%)
Query: 900 DSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLI 959
D + ++S +AGG+GLNL A+ V I D W+ + QA DR HR+GQ+ V + R I
Sbjct: 1 DPDVNVLIISLKAGGVGLNLTCANHVFIMDPWWSWSVEAQAIDRIHRLGQEKPVFVTRYI 60
Query: 960 TTDSVEEVILERAMQKLDIDG 980
D+VEE +L+ +K I G
Sbjct: 61 VRDTVEERMLKIQERKNFITG 81
>At2g40770 [L] KOG0298 DEAD box-containing helicase-like transcription
factor/DNA repair protein
Length = 1648
Score = 59.7 bits (143), Expect = 3e-08
Identities = 71/295 (24%), Positives = 116/295 (39%), Gaps = 63/295 (21%)
Query: 566 LVIVPLSTITNWTIEFEKWAP--SLRTIVYKGNPNQRKALQHTI---KMGNFDVVLTTYE 620
L++ P + W E + SL T +Y+G N + + I ++ N D+VLTTY+
Sbjct: 487 LIVCPAPILPQWHSEITRHTRLGSLITCIYEGVRNASLSEEPMIDITELLNADIVLTTYD 546
Query: 621 YIIKDRPL-LAKHD-----------------------WAHMIIDEGHRMK-NAQSKLSYT 655
+ +D +HD W + +DE ++ NA +
Sbjct: 547 VLKEDLTHDFDRHDGDRHCLRFQKRYPVIPTPLTRIFWWRICLDEAQMVESNAAAATEMA 606
Query: 656 LTHYYKTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFANTGXXXXX 715
L Y TK+R +TGTP+Q L +L+ LL F+ F+ S+ + E P+
Sbjct: 607 LRLY--TKHRWCITGTPIQRKLDDLFGLLKFLKANPFDVSRWWIEVIRDPYER------- 657
Query: 716 XXXXXXXXXVIRRLHKVLRPFLLRRLKKEV--EKDLPDKVEKVVKCKLSSLQQQLYE--- 770
+ HK + + R K V E LP + E V K S++++ Y
Sbjct: 658 -----RDTKAMEFTHKFFKQVMWRSSKVHVADELQLPPQEECVSWLKFSAIEEHFYSRQH 712
Query: 771 -----------QMLKHNAFFIGAGTEG---ATKAGIKGLNNKVMQLRKICNHPFV 811
+ LK + G + T A L N +++LR+ C HP V
Sbjct: 713 DTCVSYAREVIETLKRDILKRGHTSSDNPLVTHAEAAKLLNSLLKLRQACCHPQV 767
Score = 56.2 bits (134), Expect = 3e-07
Identities = 42/146 (28%), Positives = 64/146 (43%), Gaps = 12/146 (8%)
Query: 835 KFELLDRVLPKFKASGH--RVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKA------ 886
K E + R + K+S +VL+F V+D++E + +R+ GG K+
Sbjct: 1416 KIEAVTRRILWIKSSDPQTKVLVFSSWNDVLDVLEHAFAANSITCIRMKGGRKSQTAISK 1475
Query: 887 ----EDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQD 942
E T + LL + G GLNL A VI+ + NP + QA
Sbjct: 1476 FKGSEKETQKTNSHQKEEKSIQVLLLLVQHGANGLNLLEAQHVILVEPLLNPAAEAQAVG 1535
Query: 943 RAHRIGQKNEVRILRLITTDSVEEVI 968
R HRIGQ+ + R + + +VEE I
Sbjct: 1536 RVHRIGQEKPTLVHRFLVSGTVEESI 1561
>Hs4502453 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 947
Score = 58.9 bits (141), Expect = 5e-08
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 1257 EHSRTFIFERLPS--RKEYPDYYKVIEKPVALETITKKLNKKQYQSINEVKSDLETMFNN 1314
+HS ++ F+R + + PDYY +I+ P+ L TI K+L K Y +E D TMF+N
Sbjct: 45 KHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDFNTMFSN 104
Query: 1315 AKLYNEEGSWVFNDAEALEEFAIDWFSK 1342
LYN+ G + A+ALE+ + S+
Sbjct: 105 CYLYNKPGDDIVLMAQALEKLFMQKLSQ 132
>YGR252w [BK] KOG1472 Histone acetyltransferase SAGA/ADA catalytic subunit
PCAF/GCN5 and related proteins
Length = 439
Score = 57.8 bits (138), Expect = 1e-07
Identities = 27/90 (30%), Positives = 49/90 (54%)
Query: 1246 ALLRELTDPTDEHSRTFIFERLPSRKEYPDYYKVIEKPVALETITKKLNKKQYQSINEVK 1305
A ++ + H+ + F + +++E PDYY I++P+ L T+ KL +YQ + +
Sbjct: 334 AAIQNILTELQNHAAAWPFLQPVNKEEVPDYYDFIKEPMDLSTMEIKLESNKYQKMEDFI 393
Query: 1306 SDLETMFNNAKLYNEEGSWVFNDAEALEEF 1335
D +FNN ++YN E + + A LE+F
Sbjct: 394 YDARLVFNNCRMYNGENTSYYKYANRLEKF 423
>Hs7304919 [B] KOG1245 Chromatin remodeling complex WSTF-ISWI large subunit
(contains heterochromatin localization PHD and BROMO
domains)
Length = 1674
Score = 57.8 bits (138), Expect = 1e-07
Identities = 28/75 (37%), Positives = 45/75 (59%)
Query: 1245 LALLRELTDPTDEHSRTFIFERLPSRKEYPDYYKVIEKPVALETITKKLNKKQYQSINEV 1304
L+ +L H ++ F +L S+ + PDYY +I+KP+AL I +K+NK +Y+ +E
Sbjct: 1553 LSAFEQLVVELVRHDDSWPFLKLVSKIQVPDYYDIIKKPIALNIIREKVNKCEYKLASEF 1612
Query: 1305 KSDLETMFNNAKLYN 1319
D+E MF+N YN
Sbjct: 1613 IDDIELMFSNCFEYN 1627
>CE23294 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 540
Score = 57.8 bits (138), Expect = 1e-07
Identities = 58/210 (27%), Positives = 93/210 (43%), Gaps = 30/210 (14%)
Query: 513 LKEYQLKGLEWMVSLYNNHLNG-ILADEMGLGKTIQSISLISYLYEIK--------NERQ 563
L +Q +WM+ +G IL G GKT I+LI +IK ++
Sbjct: 44 LMPHQEAARDWMIDREAQEPSGGILGLAHGQGKTAIVIALILD-QKIKCASNDKKFEQKS 102
Query: 564 PFLVIVPLSTITNWTIEFEKWAPSLRTIVYKGNPNQRKALQHTI---KMGNFDVVLTTYE 620
P L+IVP I W EF+ VY ++ + I ++ +DVVLTTY
Sbjct: 103 PTLIIVPKRIIYQWYDEFKDRLEENALSVYLYYDDEFSEARKNISASELQKYDVVLTTYR 162
Query: 621 YI-IKDRP---------LLAKHDWAHMIIDEGHRMKNAQSKLSYTLTHYYKTKNRLILTG 670
+ +K++ +L W +++DE H ++++ +K S T +KNR +T
Sbjct: 163 NVPVKEKDETGEKVSKQVLQNIKWTRIVLDEAHNIRDSNTKKS-TAIATLASKNRWCVTA 221
Query: 671 TPLQNNLPELWALLNFVLPKIFNSSKTFDE 700
P QN+ W + N +L F +K F E
Sbjct: 222 APFQNS---EWDICNLIL---FLGNKPFGE 245
>CE27187 [B] KOG1245 Chromatin remodeling complex WSTF-ISWI large subunit
(contains heterochromatin localization PHD and BROMO
domains)
Length = 1427
Score = 57.0 bits (136), Expect = 2e-07
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 1235 PPLKDKVEALLALLRELTDPTDEHSRTFIFERLPSRKEYPDYYKVIEKPVALETITKKLN 1294
P +K+K+ + LL+E ++ F + KE PDYY VI++P+ L T+ K+
Sbjct: 1320 PNIKEKMTLIETLLKEAM----RQECSWPFLQPVDSKEVPDYYDVIKRPMNLRTMMNKIK 1375
Query: 1295 KKQYQSINEVKSDLETMFNNAKLYNEEGSWVFNDAEALEEFAID 1338
++ Y EV++D + + +N + YNE + ++ + L +F D
Sbjct: 1376 QRIYNKPIEVRNDFQLILSNCETYNEPENEIYKLSRELHDFMAD 1419
>SPAC11E3.01c [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 193
Score = 56.2 bits (134), Expect = 3e-07
Identities = 58/189 (30%), Positives = 86/189 (44%), Gaps = 20/189 (10%)
Query: 940 AQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNK--STAXXX 997
AQDR+HRIGQ +V I RLI+ +VE +L RA QK +D VIQ G+F + A
Sbjct: 1 AQDRSHRIGQTRDVHIYRLISEYTVESNMLRRANQKRMLDKIVIQGGEFTTEWFRKADVL 60
Query: 998 XXXXXXXXXGDTNKDDEYSGELDDEELNEI-LARTEDEK-VLFKKIDEERVANEKREAID 1055
K D SG +EE E+ LA EDE+ V ++ + A E+ E +
Sbjct: 61 DLFDLDDESLKKVKADSDSGSTKNEENWEVALAAAEDEEDVQAAQVARKESALEQTEFSE 120
Query: 1056 LGLRKPLPRLITKEELPSVFTEDITDHLNVEPAAIGRIRERKRVYYDDGLTEEQWLQAVD 1115
+ ++TK+ P L+ + A G R+ + T + +
Sbjct: 121 TSTPQ---AMLTKDSTP----------LSSDSATPGFERDSTE---EQSNTNDMDEDRSE 164
Query: 1116 NDEDLDETI 1124
+EDLDET+
Sbjct: 165 LEEDLDETV 173
>CE19384 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 374
Score = 56.2 bits (134), Expect = 3e-07
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Query: 1233 EEPPLKDKVEALLALLRELTDPTDEHSRTFIFERLPS--RKEYPDYYKVIEKPVALETIT 1290
E L D+++ L++L+E T + S TF F + DY++VI+KP+ + TI
Sbjct: 111 ESDHLHDELKKCLSILKEFEKSTHD-SFTFPFRKPVDVVLLGLTDYHEVIKKPMDMSTIR 169
Query: 1291 KKLNKKQYQSINEVKSDLETMFNNAKLYNEEGSWVFNDA-EALEEFAIDW 1339
KKL ++Y + E K D + M NN YN EG V + A + ++FA W
Sbjct: 170 KKLIGEEYDTAVEFKEDFKLMINNCLTYNNEGDPVADFALQFRKKFAAKW 219
>Hs7657218 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 722
Score = 55.5 bits (132), Expect = 6e-07
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Query: 1238 KDKVEALLALLRELTDPTDEHSRTFIFERLPS--RKEYPDYYKVIEKPVALETITKKLNK 1295
K + L LLR + +H + F++ + PDYYK+I+ P+ + TI K+L
Sbjct: 57 KRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLEN 116
Query: 1296 KQYQSINEVKSDLETMFNNAKLYNEEGSWVFNDAEALEE 1334
Y + E D TMF N +YN+ G + AEALE+
Sbjct: 117 NYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEK 155
>Hs19718731 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 1362
Score = 55.5 bits (132), Expect = 6e-07
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Query: 1238 KDKVEALLALLRELTDPTDEHSRTFIFERLPS--RKEYPDYYKVIEKPVALETITKKLNK 1295
K + L LLR + +H + F++ + PDYYK+I+ P+ + TI K+L
Sbjct: 57 KRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLEN 116
Query: 1296 KQYQSINEVKSDLETMFNNAKLYNEEGSWVFNDAEALEE 1334
Y + E D TMF N +YN+ G + AEALE+
Sbjct: 117 NYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEK 155
>YLR357w [BK] KOG1827 Chromatin remodeling complex RSC subunit RSC1/Polybromo
and related proteins
Length = 889
Score = 55.1 bits (131), Expect = 8e-07
Identities = 29/81 (35%), Positives = 44/81 (53%), Gaps = 2/81 (2%)
Query: 1263 IFERLPSRKEYPDYYKVIEKPVALETITKKLNKKQYQSINEVKSDLETMFNNAKLYNEEG 1322
IF LP +K+YPDYY VI+ PV+ T+ K++ Y + +D+ + NAK YN
Sbjct: 42 IFNVLPPKKDYPDYYAVIKNPVSFNTLKKRI--PHYTDAQQFMNDVVQIPWNAKTYNTRD 99
Query: 1323 SWVFNDAEALEEFAIDWFSKN 1343
S ++ A LE++ D N
Sbjct: 100 SGIYKYALVLEKYLKDTIYPN 120
>Hs6382076 [BK] KOG1472 Histone acetyltransferase SAGA/ADA catalytic subunit
PCAF/GCN5 and related proteins
Length = 832
Score = 55.1 bits (131), Expect = 8e-07
Identities = 35/113 (30%), Positives = 57/113 (49%), Gaps = 6/113 (5%)
Query: 1230 KRKEEPPLKDKVEALLALLRELTDPTDEHSRTFIFERLPSRKEYPDYYKVIEKPVALETI 1289
++ +EP D+ L + L+ + H + F R E P YY+VI P+ L+T+
Sbjct: 717 EKSKEPRDPDQ---LYSTLKSILQQVKSHQSAWPFMEPVKRTEAPGYYEVIRFPMDLKTM 773
Query: 1290 TKKLNKKQYQSINEVKSDLETMFNNAKLYNEEGSWVFNDAEALEEFAIDWFSK 1342
+++L + Y S +DL+ +F N K YN S + A LE+F +FSK
Sbjct: 774 SERLKNRYYVSKKLFMADLQRVFTNCKEYNAAESEYYKCANILEKF---FFSK 823
>At5g46550 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 506
Score = 55.1 bits (131), Expect = 8e-07
Identities = 41/120 (34%), Positives = 60/120 (49%), Gaps = 8/120 (6%)
Query: 1225 DDAPTKRKEEPPLKDKVEALLALLRELTDPTDEHSRTFIFERL--PSRKEYPDYYKVIEK 1282
D+ K+K+ D LALLR L EH ++F+ P + E PDY+ VI+K
Sbjct: 67 DEVQPKKKQRLDC-DWSSQCLALLRFLM----EHRGGWLFKEPVDPVKMEIPDYFNVIQK 121
Query: 1283 PVALETITKKLNKKQYQSINEVKSDLETMFNNAKLYNEEGSWVFNDAEALEE-FAIDWFS 1341
P+ L T+ KL K Y + +E +D+ F NA YN + V A+ + E F + W S
Sbjct: 122 PMDLGTVKSKLLKNVYSNADEFAADVRLTFANAMHYNPLWNEVHTIAKEINEIFEVRWES 181
>At3g42670 [L] KOG0390 DNA repair protein SNF2 family
Length = 1256
Score = 55.1 bits (131), Expect = 8e-07
Identities = 38/153 (24%), Positives = 76/153 (48%), Gaps = 4/153 (2%)
Query: 814 EVENVINPTRENSSILYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMR 873
E+E + + ++ S +++ ++ F ++ R K H + ++ + + + R R
Sbjct: 1045 EIEKLKHDAKKGSKVMFVLNLVFRVVKR--EKILIFCHNIAPIRLFLELFENVFRWKRGR 1102
Query: 874 DLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWN 933
+L + L G + +R ++ F P + L S A G++L A VI+ D++WN
Sbjct: 1103 EL--LTLTGDLELFERGRVIDKFEEPGGQSRVLLASITACAEGISLTAASRVIMLDSEWN 1160
Query: 934 PHQDLQAQDRAHRIGQKNEVRILRLITTDSVEE 966
P + QA RA R GQ+ V + +L++ ++EE
Sbjct: 1161 PSKTKQAIARAFRPGQQKVVYVYQLLSRGTLEE 1193
>7290870 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 1998
Score = 55.1 bits (131), Expect = 8e-07
Identities = 26/61 (42%), Positives = 37/61 (60%)
Query: 1274 PDYYKVIEKPVALETITKKLNKKQYQSINEVKSDLETMFNNAKLYNEEGSWVFNDAEALE 1333
PDY+K+I++P+ + TI K+L Y S E D TMFNN +YN+ G V A+ LE
Sbjct: 71 PDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLE 130
Query: 1334 E 1334
+
Sbjct: 131 K 131
>At5g20420 [L] KOG0390 DNA repair protein SNF2 family
Length = 1261
Score = 54.7 bits (130), Expect = 1e-06
Identities = 38/159 (23%), Positives = 78/159 (48%), Gaps = 4/159 (2%)
Query: 808 HPFVFDEVENVINPTRENSSILYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIME 867
+P E+ + + ++ S +++ ++ F ++ R K H + T++ + +
Sbjct: 1045 NPQELSEIGKLKHDAKKGSKVMFVLNLIFRVVKR--EKILIFCHNIAPIRMFTELFENIF 1102
Query: 868 DFLRMRDLKYMRLDGGTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVII 927
+ R R++ + L G + +R ++ F P + L S A G++L A VI+
Sbjct: 1103 RWQRGREI--LTLTGDLELFERGRVIDKFEEPGNPSRVLLASITACAEGISLTAASRVIM 1160
Query: 928 FDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEE 966
D++WNP + QA RA R GQ+ V + +L++ ++EE
Sbjct: 1161 LDSEWNPSKTKQAIARAFRPGQQKVVYVYQLLSRGTLEE 1199
>Hs11426183 [BK] KOG1472 Histone acetyltransferase SAGA/ADA catalytic subunit
PCAF/GCN5 and related proteins
Length = 837
Score = 53.9 bits (128), Expect = 2e-06
Identities = 33/108 (30%), Positives = 53/108 (48%), Gaps = 1/108 (0%)
Query: 1228 PTKRKEEPPLKDKVEALLALLRELTDPTDEHSRTFIFERLPSRKEYPDYYKVIEKPVALE 1287
P +++ LKD + L L+ L H + F + E PDYY+VI P+ L+
Sbjct: 718 PLGKEKGKELKDP-DQLYTTLKNLLAQIKSHPSAWPFMEPVKKSEAPDYYEVIRFPIDLK 776
Query: 1288 TITKKLNKKQYQSINEVKSDLETMFNNAKLYNEEGSWVFNDAEALEEF 1335
T+T++L + Y + +DL+ + N + YN S A ALE+F
Sbjct: 777 TMTERLRSRYYVTRKLFVADLQRVIANCREYNPPDSEYCRCASALEKF 824
>Hs10835101 [BK] KOG1472 Histone acetyltransferase SAGA/ADA catalytic subunit
PCAF/GCN5 and related proteins
Length = 837
Score = 53.9 bits (128), Expect = 2e-06
Identities = 33/108 (30%), Positives = 53/108 (48%), Gaps = 1/108 (0%)
Query: 1228 PTKRKEEPPLKDKVEALLALLRELTDPTDEHSRTFIFERLPSRKEYPDYYKVIEKPVALE 1287
P +++ LKD + L L+ L H + F + E PDYY+VI P+ L+
Sbjct: 718 PLGKEKGKELKDP-DQLYTTLKNLLAQIKSHPSAWPFMEPVKKSEAPDYYEVIRFPIDLK 776
Query: 1288 TITKKLNKKQYQSINEVKSDLETMFNNAKLYNEEGSWVFNDAEALEEF 1335
T+T++L + Y + +DL+ + N + YN S A ALE+F
Sbjct: 777 TMTERLRSRYYVTRKLFVADLQRVIANCREYNPPDSEYCRCASALEKF 824
>CE28069 [K] KOG1778 CREB binding protein/P300 and related TAZ Zn-finger
proteins
Length = 2045
Score = 53.9 bits (128), Expect = 2e-06
Identities = 35/108 (32%), Positives = 54/108 (49%), Gaps = 5/108 (4%)
Query: 1235 PPLKDKV---EALLALLRELTDPTDEHSRTFIFERLPSRK--EYPDYYKVIEKPVALETI 1289
PP +D V E L+ L + + D+ F K PDY+++I++P+ LET+
Sbjct: 846 PPTEDTVFSQEDLIKFLLPVWEKLDKSEDAAPFRVPVDAKLLNIPDYHEIIKRPMDLETV 905
Query: 1290 TKKLNKKQYQSINEVKSDLETMFNNAKLYNEEGSWVFNDAEALEEFAI 1337
KKL QYQ+ + D+ M +NA LYN + S V+ L E +
Sbjct: 906 HKKLYAGQYQNAGQFCDDIWLMLDNAWLYNRKNSKVYKYGLKLSEMFV 953
>CE21117 [K] KOG1778 CREB binding protein/P300 and related TAZ Zn-finger
proteins
Length = 2056
Score = 53.9 bits (128), Expect = 2e-06
Identities = 35/108 (32%), Positives = 54/108 (49%), Gaps = 5/108 (4%)
Query: 1235 PPLKDKV---EALLALLRELTDPTDEHSRTFIFERLPSRK--EYPDYYKVIEKPVALETI 1289
PP +D V E L+ L + + D+ F K PDY+++I++P+ LET+
Sbjct: 857 PPTEDTVFSQEDLIKFLLPVWEKLDKSEDAAPFRVPVDAKLLNIPDYHEIIKRPMDLETV 916
Query: 1290 TKKLNKKQYQSINEVKSDLETMFNNAKLYNEEGSWVFNDAEALEEFAI 1337
KKL QYQ+ + D+ M +NA LYN + S V+ L E +
Sbjct: 917 HKKLYAGQYQNAGQFCDDIWLMLDNAWLYNRKNSKVYKYGLKLSEMFV 964
>7302505 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 648
Score = 52.8 bits (125), Expect = 4e-06
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 1274 PDYYKVIEKPVALETITKKLNKKQYQSINEVKSDLETMFNNAKLYNEEGSWVFNDAEALE 1333
P YY VI +P+ + TI K++ Y+S+NE +D + + +N L+N G V+ + LE
Sbjct: 41 PTYYTVIHRPMDIGTIVKRVQNNYYKSVNEAIADFKQIISNCFLFNRSGDVVYRKGQMLE 100
Query: 1334 EF 1335
+F
Sbjct: 101 KF 102
>7301065 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 513
Score = 52.8 bits (125), Expect = 4e-06
Identities = 25/61 (40%), Positives = 37/61 (59%)
Query: 1274 PDYYKVIEKPVALETITKKLNKKQYQSINEVKSDLETMFNNAKLYNEEGSWVFNDAEALE 1333
PDY+ V++ P+ L TI K+L+ K Y +E D + +F+N LYN EGS V+ + L
Sbjct: 75 PDYHAVVKHPMDLSTIRKRLHNKYYWQASEALEDFKLIFDNCLLYNLEGSPVYQAGKLLM 134
Query: 1334 E 1334
E
Sbjct: 135 E 135
>7298896 [K] KOG0008 Transcription initiation factor TFIID subunit TAF1
Length = 2065
Score = 52.8 bits (125), Expect = 4e-06
Identities = 33/115 (28%), Positives = 57/115 (48%), Gaps = 16/115 (13%)
Query: 1238 KDKVEALLALLRELTDPTDEHSRTFIFERLPS----------------RKEYPDYYKVIE 1281
+DK+ L + L D D+ + +FIF++L S +K+ DYY VI+
Sbjct: 1575 EDKLMRLEKAINPLLDDDDQVALSFIFDKLHSQIKQLPESWPFLKPVNKKQVKDYYTVIK 1634
Query: 1282 KPVALETITKKLNKKQYQSINEVKSDLETMFNNAKLYNEEGSWVFNDAEALEEFA 1336
+P+ LETI K + +Y S E +D+E + N + YN + ++ + E+A
Sbjct: 1635 RPMDLETIGKNIEAHRYHSRAEYLADIELIATNCEQYNGSDTRYTKFSKKILEYA 1689
>Hs4557557 [K] KOG1778 CREB binding protein/P300 and related TAZ Zn-finger
proteins
Length = 2414
Score = 52.0 bits (123), Expect = 6e-06
Identities = 34/94 (36%), Positives = 47/94 (49%), Gaps = 7/94 (7%)
Query: 1248 LRELTDPTDEHSRTFIFERLPSRKEY-------PDYYKVIEKPVALETITKKLNKKQYQS 1300
LR+ PT E E LP R+ PDY+ +++ P+ L TI +KL+ QYQ
Sbjct: 1054 LRQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKSPMDLSTIKRKLDTGQYQE 1113
Query: 1301 INEVKSDLETMFNNAKLYNEEGSWVFNDAEALEE 1334
+ D+ MFNNA LYN + S V+ L E
Sbjct: 1114 PWQYVDDIWLMFNNAWLYNRKTSRVYKYCSKLSE 1147
>Hs11067749 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 726
Score = 51.6 bits (122), Expect = 8e-06
Identities = 24/61 (39%), Positives = 36/61 (58%)
Query: 1274 PDYYKVIEKPVALETITKKLNKKQYQSINEVKSDLETMFNNAKLYNEEGSWVFNDAEALE 1333
PDY+K+I+ P+ + TI K+L Y S +E D TMF N +YN+ + A+ALE
Sbjct: 71 PDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALE 130
Query: 1334 E 1334
+
Sbjct: 131 K 131
>ECU08g1640 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 370
Score = 51.6 bits (122), Expect = 8e-06
Identities = 23/61 (37%), Positives = 38/61 (61%)
Query: 1274 PDYYKVIEKPVALETITKKLNKKQYQSINEVKSDLETMFNNAKLYNEEGSWVFNDAEALE 1333
P YY VI++P+ L+T+ KL +++YQS+ E DLE + N K +N G+ V+ + E
Sbjct: 186 PGYYSVIKEPMDLQTMRSKLEQRRYQSVEEFGRDLELIVENCKKFNAPGTEVYVCGQEFE 245
Query: 1334 E 1334
+
Sbjct: 246 K 246
>7295362 [L] KOG0298 DEAD box-containing helicase-like transcription
factor/DNA repair protein
Length = 1270
Score = 51.6 bits (122), Expect = 8e-06
Identities = 38/147 (25%), Positives = 64/147 (42%), Gaps = 9/147 (6%)
Query: 825 NSSILYRVSGKFELLDRVLPKFKASGH--RVLMFFQMTQVMDIMEDFLRMRDLKYMRLDG 882
+ SI+ S K + ++ K K ++++F Q ++ + L + +++
Sbjct: 1096 HKSIIGDFSTKISSVVELVLKIKGENEQEKIIVFSQWQAILIEIARALSLNGIQFRNKCT 1155
Query: 883 GTKAEDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQD 942
+D F P S C L+ G GLNL A V + + NP + QA
Sbjct: 1156 NKDFDD-------FKNPLSNVTCLLMPLSKGSKGLNLIEATHVFLVEPILNPGDERQAIG 1208
Query: 943 RAHRIGQKNEVRILRLITTDSVEEVIL 969
R HR GQK ++ R I +++EE IL
Sbjct: 1209 RIHRFGQKRPTKVHRFIVNETIEENIL 1235
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.314 0.133 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,700,428
Number of Sequences: 60738
Number of extensions: 3132829
Number of successful extensions: 10179
Number of sequences better than 1.0e-05: 189
Number of HSP's better than 0.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 9073
Number of HSP's gapped (non-prelim): 431
length of query: 1344
length of database: 30,389,216
effective HSP length: 119
effective length of query: 1225
effective length of database: 23,161,394
effective search space: 28372707650
effective search space used: 28372707650
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)