ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactVI1260 good LK KOG1967 Replication, recombination and repair DNA repair/transcription protein Mms19 r_klactVI1260 good LK KOG1967 Transcription DNA repair/transcription protein Mms19

Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactVI1260 444195 441109 -1029
         (1029 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   
Score E Sequences producing significant alignments: (bits) Value YIL128w [LK] KOG1967 DNA repair/transcription protein Mms19 845 0.0 SPAC1071.02 [LK] KOG1967 DNA repair/transcription protein Mms19 229 2e-59 Hs13375626 [LK] KOG1967 DNA repair/transcription protein Mms19 130 8e-30 At5g48120 [LK] KOG1967 DNA repair/transcription protein Mms19 79 3e-14 CE17459 [LK] KOG1967 DNA repair/transcription protein Mms19 70 2e-11 >YIL128w [LK] KOG1967 DNA repair/transcription protein Mms19 Length = 1032 Score = 845 bits (2184), Expect = 0.0 Identities = 454/1036 (43%), Positives = 666/1036 (63%), Gaps = 17/1036 (1%) Query: 6 TEDKLKADIVSFMANAKVNTSVADKLANTIADEVTRKSIELLRIVIFLREYLTSDDDSTR 65 T D+L + +V+FMAN ++ S A++ A+T+ D + +SI+LL +V+ L++Y S+++ R Sbjct: 2 TPDELNSAVVTFMANLNIDDSKANETASTVTDSIVHRSIKLLEVVVALKDYFLSENEVER 61 Query: 66 QNALSCLSCILEHISPAVLKKNDVSVIFDFYQSKMEDSGCMKETLQGINSLVLMDCFYVS 125 + AL+CL+ IL L KN+ SVIF FYQSK++D KE L+G +L M ++ Sbjct: 62 KKALTCLTTILAKTPKDHLSKNECSVIFQFYQSKLDDQALAKEVLEGFAALAPMKYVSIN 121 Query: 126 HVEKLLKLLGNDYQPTNFLAATRYFGFRIMDNILIKF---KSQMLGNLKLNDLYIETFIL 182 + +LL+LL ++YQ LA+TR + F+I+ I +F S ++NDL+IETF+ Sbjct: 122 EIAQLLRLLLDNYQQGQHLASTRLWPFKILRKIFDRFFVNGSSTEQVKRINDLFIETFLH 181 Query: 183 VATGEKDPRNLLISFRLNSDISTGLRNIDSFKEELFDILFCYFPIMFKPPSNDPYKITNN 242 VA GEKDPRNLL+SF LN I++ L+N+++FKE+LFD+LFCYFPI FKPP +DPYKI+N Sbjct: 182 VANGEKDPRNLLLSFALNKSITSSLQNVENFKEDLFDVLFCYFPITFKPPKHDPYKISNQ 241 Query: 243 DLKLALRSAITATEKFEEDAFGNLLDKLAASSPTVKNDTILTLKACVDTFSGTSSLKHWL 302 DLK ALRSAITAT F EDA+ NLLDKL ASSP VKNDT+LTL CV F G+S L++W Sbjct: 242 DLKTALRSAITATPLFAEDAYSNLLDKLTASSPVVKNDTLLTLLECVRKFGGSSILENWT 301 Query: 303 PIWDALKFEILNGTDPEPSILDTAMDTENQNSRPEGNISNYXXXXXXXXXXXXXXXALDE 362 +W+ALKFEI+ ++ + L + ++Q S G +NY D+ Sbjct: 302 LLWNALKFEIMQNSEGNENTLLNPYN-KDQQSDDVGQYTNYDACLKIINLMALQLYNFDK 360 Query: 363 HAFDKFFNHIFDEFVPNFEQDKDLKQCCDLLASISKVSLQTFNKVMKKVIPVLFMDKDLD 422 +F+KFF H+ DE PNF+ +KDLKQ C +L++I +++ FNKV+ P LF+ + Sbjct: 361 VSFEKFFTHVLDELKPNFKYEKDLKQTCQILSAIGSGNVEIFNKVISSTFP-LFLINTSE 419 Query: 423 ASKQKLLILNLAPFFSAYISLFGETGKE-ISKFHAKNELQNHKDSILMVFSKALTGTSKN 481 +K KLLI+N + F +YI LFG T KE + N++ +KD I+M+ S ALT +SK Sbjct: 420 VAKLKLLIMNFSFFVDSYIDLFGRTSKESLGTPVPNNKMAEYKDEIIMILSMALTRSSKA 479 Query: 482 EVTLRTLAIIQFTTLVKMSGFLDSEEIAMIVQYFTETILTDENKNIYCACLEGLKFISVF 541 EVT+RTL++IQFT ++KM GFL EE+++I+QYFTE ILTD NKNIY ACLEGLK IS Sbjct: 480 EVTIRTLSVIQFTKMIKMKGFLTPEEVSLIIQYFTEEILTDNNKNIYYACLEGLKTISEI 539 Query: 542 NESIIYEVSLKYMLHLLPDNENMVPITLNNTDIVPIERVLKVILDFTTSRHHLVKESIVG 601 E +++E+SLK +L LLPD I +N+ + + IE +LK+ILDFTTSRH LVKESI Sbjct: 540 YEDLVFEISLKKLLDLLPDCFEE-KIRVNDEENIHIETILKIILDFTTSRHILVKESITF 598 Query: 602 LASKLNLIVMHPNCSDYXXXXXXXXXXXXQNNIDEFDQNVVQ-----FLKESMEETFLQN 656 LA+KLN + +Y NN ++NV+ LK ++E + Sbjct: 599 LATKLNRVAKISKSREYCFLLISTIYSLFNNNNQ--NENVLNEEDALALKNAIEPKLFEI 656 Query: 657 SLKNDMIYLDDHSLSLAAGVLFQLNIKSDVSTHQSELITYNKCFLDEE--RIFDSAQRSI 714 + I D+++L+L + VLF N+K + HQ EL YN+ F+ E RI D+ Sbjct: 657 ITQESAIVSDNYNLTLLSNVLFFTNLKIPQAAHQEELDRYNELFISEGKIRILDTPNVLA 716 Query: 715 VIYSRLLAALDKNTSFEAANDIFSKAIELIKNNEALPT-FESLNYLEFLALLSNKWVTES 773 + Y+++L+AL+KN F + ++L+K + T E L YLE L +LSNK+V+E Sbjct: 717 ISYAKILSALNKNCQFPQKFTVLFGTVQLLKKHAPRMTETEKLGYLELLLVLSNKFVSEK 776 Query: 774 YIESVLDLTDTSIKNLEIICWINKGLVMKNSVLATKLTDHLFSLLSDEKFGNKVAHLFEV 833 + + D D S+ NLE++ W+ KGL+M+NS+ ++++ LLS+E+ G+ V+ LFEV Sbjct: 777 DVIGLFDWKDLSVINLEVMVWLTKGLIMQNSLESSEIAKKFIDLLSNEEIGSLVSKLFEV 836 Query: 834 LVLDLLIFQRFKKVSWNNNIRLIYKQKFFNHIAQKMVNAFKSSDNMTIKSNYLTAVSLVL 893 V+D+ ++FK +SWNNN++++YKQKFF I Q +V+ +K++ +MTIK NYLTA+SLVL Sbjct: 837 FVMDISSLKKFKGISWNNNVKILYKQKFFGDIFQTLVSNYKNTVDMTIKCNYLTALSLVL 896 Query: 894 KNTPSNITISYITDXXXXXXXXXXXENIEVRISSLETLKNTVNQMSQLVTEHVHSXXXXX 953 K+TPS +I D + EVR+S+LETLK+T ++ L+TEHV + Sbjct: 897 KHTPSQSVGPFINDLFPLLLQALDMPDPEVRVSALETLKDTTDKHHTLITEHVSTIVPLL 956 Query: 954 XXXXXXSKYSNVNVRFLSLEILQTLTTSVPLNYLIPMKNEIISKLQIGLDDSKRRVRKQC 1013 KY++V+VR ++L++L+ +TT VPLNY + +++++S L L D KR +RKQC Sbjct: 957 LSLSLPHKYNSVSVRLIALQLLEMITTVVPLNYCLSYQDDVLSALIPVLSDKKRIIRKQC 1016 Query: 1014 IDTKQAYLELGQVPFE 1029 +DT+Q Y ELGQ+PFE Sbjct: 1017 VDTRQVYYELGQIPFE 1032 >SPAC1071.02 [LK] KOG1967 DNA repair/transcription protein Mms19 Length = 1018 Score = 229 bits (583), Expect = 2e-59 Identities = 251/1048 (23%), Positives = 450/1048 (41%), Gaps = 106/1048 (10%) Query: 28 ADKLANTIADEVTRKSIELLRIVIFLREYLTSDDDSTRQNALSCLSCILEHISPAVLKKN 87 A+ + + I +E+ + ++ +V + EYLT ++ S R A+ LS L + L Sbjct: 20 ANDVVDRIVEEIVTDRMGIVDLVTSIGEYLTDNNISVRAKAVLLLSQTLGELPKDRLPAK 79 Query: 88 DVSVIFDFYQSKMEDSGCMKETLQGINSLVLMDCFYVSHVEKLLKLLGNDYQPTNFLAAT 147 VSV+ FY S+++D MKE GI +L+ M F + + K L + + AT Sbjct: 80 HVSVLLQFYLSRLDDEVTMKENALGIGALLNMQNFPAQKIVDVCKALFSSTDMPKYAQAT 139 Query: 148 RYFGFR----IMDNILIKFKSQMLGNLKLNDLYIETFILVATGEKDPRNLLISFRLNSDI 203 R + I+DN L SQ D + GEKDPRNL++ F + I Sbjct: 140 RLNILKVFETIIDNYLFFISSQ------TRDAFFSGICSTFAGEKDPRNLMLVFSMLKKI 193 Query: 204 STGLRNIDSFKEELFDILFCYFPIMFK-PPSNDPYKITNNDLKLALRSAITATEKFEEDA 262 + ID F+++ FDI +CYFPI F+ PP IT++DLK+ALR + A + F + Sbjct: 194 LSTF-PIDGFEQQFFDITYCYFPITFRAPPDATNLAITSDDLKIALRETLVANDAFSKLL 252 Query: 263 FGNLLDKLAASSPTVKNDTI-LTLKACVDTFSGTSSLKHWLPIWDALKFEILNGTDPE-P 320 L ++L AS+ +K D + + ++AC T+ + L W+++K EILN TD E Sbjct: 253 LPALFERLKASTVRIKIDALNIYIEAC-KTWRVGAYLWSAKDFWESIKQEILNSTDAELQ 311 Query: 321 SILDTAMDTENQNSRPEGNISNYXXXXXXXXXXXXXXXALDEHAFDKFFNHIFDEFVPNF 380 ++ A++T E S+ +F +F + I + Sbjct: 312 NLALGALNTLASKFYKEEGFSS---------------------SFTEFVDMILIQLSQRL 350 Query: 381 EQDKDLK---QCCDLLASISKVSLQTFN----KVMKKVIPVLFMDKDLDASKQKLLILNL 433 +D ++K C + AS++ +S++TFN + V+ + +++ L+ KQK +++ L Sbjct: 351 LEDVNVKSCGSCAAVFASLASISVETFNYCSCNFLPSVLDLPMVNEPLE--KQKGMLVFL 408 Query: 434 APFFSAYISLFGETGKEISKFHAKNELQNHKDSILMVFSKALTGTSKNEVTLRTLAIIQF 493 + + L+G+ + ++ N L +KD L S +L GT+K+E +R LA+ Sbjct: 409 EYVYKCLVLLYGK-WRSKNQADIDNPLLVYKDKQLSFVSGSLMGTAKDETEIRMLALKVI 467 Query: 494 TTLVKMSGFLDSEEIAMIVQYFTETILTDENKNIYCACLEGLKFISVFNESIIYEVSLKY 553 + + FL E+ M++Q F + I D + I E LK + + + S + Sbjct: 468 FLMASIKNFLTESELTMVLQ-FLDDIAFDFSDPIKKKATECLKDLGLLKPDFLLLTSFPF 526 Query: 554 MLHLLPDNENMVPITLNNTDIVPIERVLKVILDFTTSRHHLVKESIVGLASKLNLIVMHP 613 L D+ +T ++ ++ L V++ + R L K ++ L L Sbjct: 527 AFSKLTDD-----VTAKSSSEETFKQYLSVLVSISEER-SLFKALVIRLVEMLKDQFKSK 580 Query: 614 NCS-DYXXXXXXXXXXXXQNNIDEFDQNVVQFLKESMEETF------LQNSLKNDMIYLD 666 S D + D +Q + F +E +++ F ++ +IY+ Sbjct: 581 EMSVDLVESIVQSLSVAFKERNDRNEQEIPFFFEELLKQLFTLCFANCESMNVRCLIYVS 640 Query: 667 DHSLSLA-----------AGVLFQLNIKSDVSTHQSELITYNKCFLDEERIFDSAQRS-- 713 + G L++L +++ S+LI C ER +A S Sbjct: 641 QTINEIVRVNHFEFQEKFVGQLWKLYMENS----NSDLIETEGCEKAAERFTLAASLSDQ 696 Query: 714 -----IVIYSRLLAALDKNTSF-EAAN-DIFSKAIELIKNNE-------ALPTFESL-NY 758 +V+ L L K F E N ++ + I ++ E AL SL N Sbjct: 697 KFLNLVVLLQGGLNGLSKKLHFIEKLNIELLNLLINVVFVTESPGVKISALRLISSLINK 756 Query: 759 LE----FLALLSNKWVTESYIESVLDLTDTSIKNLEIICWINKGLVMKNSVLATKLTDHL 814 E + +S+K VT + + S L+++ W++K LV + L L Sbjct: 757 CEKDEDISSFISSKGVTSLWDKVYTGTPKESEAALDVLAWVDKALVSRKHSEGIPLAFKL 816 Query: 815 FSLLSDEKFGNKVAHLFEVLVLDLLIFQRFKKVSWNNNI--RLIYKQKFFNHIAQKMVNA 872 L+ + G+ +++ D +S N+ +L+YKQ+F+ ++ K++ Sbjct: 817 LDTLNLQNVGDSSVKALSIIIKD------DPALSKENSYVEKLLYKQRFYASVSPKILEH 870 Query: 873 FKSSDNMTIKSNYLTAVSLVLKNTPSNITISYITDXXXXXXXXXXXENIEVRISSLETLK 932 ++ KS YL +S V+ N P I I + +I V++S+L + Sbjct: 871 ISTATGGE-KSLYLMLLSNVIGNVPKEIVIPDMPSILPLLLQCLSLSDISVKLSTLNVIH 929 Query: 933 NTVNQMSQLVTEHVHSXXXXXXXXXXXSKYSNVNVRFLSLEILQTLTTSVPLNYLIPMKN 992 +V +++ L+TE++ + V VR L+L+ L +L P L ++ Sbjct: 930 TSVKELTSLLTEYLDTLIPSLLAIPKDMNNPTV-VRLLALKCLGSLPEFTPTTNLQLFRD 988 Query: 993 EIISKLQIGLDDSKRRVRKQCIDTKQAY 1020 ++I L LDD KR VR + T+ + Sbjct: 989 KVIRGLIPCLDDPKRVVRTEASRTRHKW 1016 >Hs13375626 [LK] KOG1967 DNA repair/transcription protein Mms19 Length = 1030 Score = 130 bits (328), Expect = 8e-30 Identities = 87/283 (30%), Positives = 152/283 (52%), Gaps = 7/283 (2%) Query: 32 ANTIADEVTRKSIELLRIVIFLREYLTSDDDSTRQNALSCLSCILEHISPAVLKKNDVSV 91 A+ +A +V + +L++V L L + + TR + LS +L H +L+K V + Sbjct: 32 ADQVAADVKSGNYTVLQVVEALGSSLENPEPRTRARGIQLLSQVLLHCHTLLLEKEVVHL 91 Query: 92 IFDFYQSKMEDSGCM-KETLQGINSLVLMDCFYVSHVEKLLKLLGNDYQPTNFLAATRYF 150 I FY+++++D + LQG+ +L L +LK + + + R+ Sbjct: 92 IL-FYENRLKDHHLVIPSVLQGLKALSLCVALPPGLAVSVLKAIFQEVHVQSLPQVDRHT 150 Query: 151 GFRIMDNILIKFKSQMLGNLKLNDLYIETFILVATGEKDPRNLLISFRLNSDISTGLRNI 210 + I+ N + + + + L +L + + FI V GEKDPRNLL++FR+ D+ + ++ Sbjct: 151 VYNIITNFM-RTREEELKSLGADFTF--GFIQVMDGEKDPRNLLVAFRIVHDLISRDYSL 207 Query: 211 DSFKEELFDILFCYFPIMFKPPSNDPYKITNNDLKLALRSAITATEKFEEDAFGNLLDKL 270 F EELF++ CYFPI F PP NDP+ I DL L+LR+ + +T +F E L++K+ Sbjct: 208 GPFVEELFEVTSCYFPIDFTPPPNDPHGIQREDLILSLRAVLASTPRFAEFLLPLLIEKV 267 Query: 271 AASSPTVKNDTILTLKACVDTFSGTSSLKHWLP-IWDALKFEI 312 + + K D++ TL AC + G LK +LP +W +++ E+ Sbjct: 268 DSEVLSAKLDSLQTLNACCAVY-GQKELKDFLPSLWASIRREV 309 Score = 88.2 bits (217), Expect = 6e-17 Identities = 76/326 (23%), Positives = 141/326 (42%), Gaps = 23/326 (7%) Query: 711 QRSIVIYSRLLAALDKNTSFEAANDIFSKAIELIKNNEALPTFESLNYLEFLALLSNKWV 770 +R I + + +L +N N + + +EL + F S + A L NK Sbjct: 712 RRLIALLMAFVCSLPRNVEIPQLNQLMRELLELSCCHSC--PFSSTAAAKCFAGLLNKHP 769 Query: 771 TESYIESVLDLTDTSIKN-----------LEIICWINKGLVMKNSVLATKLTDHLFSLLS 819 ++ L L ++ ++ W+ K LV++ L++ LT L LLS Sbjct: 770 AGQQLDEFLQLAVDKVEAGLGSGPCRSQAFTLLLWVTKALVLRYHPLSSCLTARLMGLLS 829 Query: 820 DEKFGNKVAHLFEVLVLDLL-IFQRFKKVSWNNNIRLIYKQKFFNHIAQKMVNAFKSSDN 878 D + G A F +L+ D + R + + +R++++Q+FF +V F ++ Sbjct: 830 DPELGPAAADGFSLLMSDCTDVLTR----AGHAEVRIMFRQRFFTDNVPALVQGFHAAPQ 885 Query: 879 MTIKSNYLTAVSLVLKNTPSNITISYITDXXXXXXXXXXXENIEVRISSLETLKNTVNQM 938 +K NYL +S VL P + + + + V++S+L L+ + + Sbjct: 886 -DVKPNYLKGLSHVLNRLPKPVLLPELPTLLSLLLEALSCPDCVVQLSTLSCLQPLLLEA 944 Query: 939 SQLVTEHVHSXXXXXXXXXXXSKYSNVNVRFLSLEILQTLTTSVPLNYLIPMKNEIISKL 998 Q+++ HV + S ++ VR +L+ + LT +P L+P K ++I L Sbjct: 945 PQVMSLHVDTLVTKFLNL---SSSPSMAVRIAALQCMHALTR-LPTPVLLPYKPQVIRAL 1000 Query: 999 QIGLDDSKRRVRKQCIDTKQAYLELG 1024 LDD KR VRK+ + + + LG Sbjct: 1001 AKPLDDKKRLVRKEAVSARGEWFLLG 1026 >At5g48120 [LK] KOG1967 DNA repair/transcription protein Mms19 Length = 1152 Score = 79.3 bits (194), Expect = 3e-14 Identities = 75/308 (24%), Positives = 135/308 (43%), Gaps = 22/308 (7%) Query: 24 NTSVADKLANTIADEVTRKSIELLRIVIFLREYLTSDDDSTR-QNALSCLSCILEHISPA 82 ++S D IA + S+ + ++V + YLT+ D+ R +++ S +E + + Sbjct: 21 SSSQQDDSLKAIASSLENDSLSITQLVREMEMYLTTTDNLVRARDSRLFESKAVERYNSS 80 Query: 83 -----VLKKNDVSVIFDFYQSKMEDS-----GCMKETLQGINSLVLMDCFYVSHVEKLLK 132 + +K +V + Q+ GC+ + + V+ D V+ + K Sbjct: 81 YARWILFRKAEVKRLLYLNQADWRAMCGALVGCLALLKRKDVAGVVTDI----DVQAMAK 136 Query: 133 LLGNDYQPTNFLAATRYFGFRIMDNILIKFKSQMLGNLKLNDLYIETFILVATGEKDPRN 192 + + Q R F +++ +L + +L + DL + GEKDP+ Sbjct: 137 SMIQNVQVQALALHERKLAFELLECLLQQHSEAIL---TMGDLLVYAMCEAIDGEKDPQC 193 Query: 193 LLISFRLNSDISTGLRN----IDSFKEELFDILFCYFPIMFKPPSNDPYKITNNDLKLAL 248 L+I F L ++ + + S +LF+++ CYFP+ F +D I DL L Sbjct: 194 LMIVFHLVELLAPLFPSPSGPLASDASDLFEVIGCYFPLHFTHTKDDEANIRREDLSRGL 253 Query: 249 RSAITATEKFEEDAFGNLLDKLAASSPTVKNDTILTLKACVDTFSGTSSLKHWLPIWDAL 308 AI++T FE A LL+KL++S P K D++ LK C + KH+ +W AL Sbjct: 254 LLAISSTPFFEPYAIPLLLEKLSSSLPVAKVDSLKCLKDCALKYGVDRMKKHYGALWSAL 313 Query: 309 KFEILNGT 316 K + T Sbjct: 314 KDTFYSST 321 >CE17459 [LK] KOG1967 DNA repair/transcription protein Mms19 Length = 876 Score = 69.7 bits (169), Expect = 2e-11 Identities = 59/235 (25%), Positives = 109/235 (46%), Gaps = 10/235 (4%) Query: 39 VTRKSIELLRIVIFLREYLTSDDDSTRQNALSCLSCILEHISPAVLKKNDVSVIFDFYQS 98 V KS L + R + SD R+ A+ + ++ L+K++VS++ +++ + Sbjct: 22 VVEKSTTLSDFMTSKRTKMVSDFPEEREEAIEEIIEVISTFPMDFLQKDEVSLLLNYFIN 81 Query: 99 KMEDSGCMK-ETLQGINSLVLMDCFYVSHVE-KLLKLLGNDYQPTNFLAATRYFGFRIMD 156 +E S ++G++ L+L + E L+++L + ++ R + I Sbjct: 82 SIESSALTGGAVIRGVHHLILKSKNLPDNFEVSLIRVLFKEGNVQSWAQKERQLQYEI-- 139 Query: 157 NILIKFKSQMLGNLK-LNDLYIETFILVATGEKDPRNLLISFRLNSDISTGLRNIDSFKE 215 LI F L LK L ++ TF+ +GE+DPR L+ F ++S + F E Sbjct: 140 --LIWFLKYRLSFLKGLGPDFLATFMKSVSGERDPRCLVHMFSAFLEVSNNF-TLGPFTE 196 Query: 216 ELFDILFCYFPIMFKPPSNDPYKITNNDLKLALRSAITATEKFEEDAFGNLLDKL 270 ++F+ + CYFP+ FKP D IT L + S + ++ F F + +KL Sbjct: 197 DMFETIACYFPVEFKPQKTD--TITREYLAASCASCLVSSPSFAPFCFLFIDEKL 249 Database: KOG eukaryal database 04/03 Posted date: Apr 14, 2003 1:07 PM Number of letters in database: 30,389,216 Number of sequences in database: 60,738 Lambda K H 0.320 0.135 0.377 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,272,119 Number of Sequences: 60738 Number of extensions: 2200686 Number of successful extensions: 5745 Number of sequences better than 1.0e-05: 5 Number of HSP's better than 0.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 5716 Number of HSP's gapped (non-prelim): 10 length of query: 1029 length of database: 30,389,216 effective HSP length: 117 effective length of query: 912 effective length of database: 23,282,870 effective search space: 21233977440 effective search space used: 21233977440 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits)