ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactVI1311   suspect: LH   U     KOG4449  Intracellular trafficking, secretion, and vesicular transport  Translocase of outer mitochondrial membrane complex, subunit TOM7

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactVI1311 462525 462346 -60  
         (60 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YNL070w [U] KOG4449 Translocase of outer mitochondrial membrane ...    84   5e-17
SPBC27B12.10c [U] KOG4449 Translocase of outer mitochondrial mem...    50   4e-07

>YNL070w [U] KOG4449 Translocase of outer mitochondrial membrane complex
          subunit TOM7
          Length = 60

 Score = 83.6 bits (205), Expect = 5e-17
 Identities = 36/44 (81%), Positives = 40/44 (90%)

Query: 1  MAFLPSFILSDESKERITKILNLTQTVAHYGWLPFILYLGWTHT 44
          M+FLPSFILSDESKERI+KIL LT  VAHYGW+PF+LYLGW HT
Sbjct: 1  MSFLPSFILSDESKERISKILTLTHNVAHYGWIPFVLYLGWAHT 44


>SPBC27B12.10c [U] KOG4449 Translocase of outer mitochondrial membrane complex
          subunit TOM7
          Length = 49

 Score = 50.4 bits (119), Expect = 4e-07
 Identities = 19/32 (59%), Positives = 27/32 (84%)

Query: 9  LSDESKERITKILNLTQTVAHYGWLPFILYLG 40
          +S+ESKER+ K+ N+ +TV HYGW+P IL+LG
Sbjct: 3  ISEESKERLVKVFNIGKTVTHYGWIPLILWLG 34


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.327    0.140    0.455 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,534,209
Number of Sequences: 60738
Number of extensions: 58313
Number of successful extensions: 245
Number of sequences better than 1.0e-05: 2
Number of HSP's better than  0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 243
Number of HSP's gapped (non-prelim): 2
length of query: 60
length of database: 30,389,216
effective HSP length: 36
effective length of query: 24
effective length of database: 28,202,648
effective search space: 676863552
effective search space used: 676863552
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)