ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI1440 good U KOG0307 Intracellular trafficking, secretion, and vesicular transport Vesicle coat complex COPII, subunit SEC31
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI1440 506007 509699 1231
(1231 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YDL195w [U] KOG0307 Vesicle coat complex COPII subunit SEC31 1052 0.0
SPBC8D2.20c [U] KOG0307 Vesicle coat complex COPII subunit SEC31 332 2e-90
Hs7705258 [U] KOG0307 Vesicle coat complex COPII subunit SEC31 276 1e-73
Hs7662370 [U] KOG0307 Vesicle coat complex COPII subunit SEC31 268 5e-71
7303990 [U] KOG0307 Vesicle coat complex COPII subunit SEC31 236 2e-61
At3g63460 [U] KOG0307 Vesicle coat complex COPII subunit SEC31 227 1e-58
Hs14149696 [U] KOG0307 Vesicle coat complex COPII subunit SEC31 198 4e-50
At1g18830 [U] KOG0307 Vesicle coat complex COPII subunit SEC31 145 3e-34
CE16320 [U] KOG0307 Vesicle coat complex COPII subunit SEC31 115 3e-25
ECU08g0210 [U] KOG0307 Vesicle coat complex COPII subunit SEC31 63 3e-09
7301821 [S] KOG0269 WD40 repeat-containing protein 61 1e-08
ECU07g0750 [B] KOG0264 Nucleosome remodeling factor subunit CAF1... 58 8e-08
At1g20540 [S] KOG1007 WD repeat protein TSSC1 WD repeat superfamily 58 1e-07
At5g23430 [D] KOG0267 Microtubule severing protein katanin p80 s... 57 2e-07
YBR195c [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NU... 56 3e-07
SPAP17D4.01 [U] KOG0277 Peroxisomal targeting signal type 2 rece... 56 4e-07
At5g08390 [D] KOG0267 Microtubule severing protein katanin p80 s... 55 7e-07
YMR131c [R] KOG0302 Ribosome Assembly protein 54 1e-06
SPAC29A4.18 [B] KOG0264 Nucleosome remodeling factor subunit CAF... 54 1e-06
Hs13899346 [R] KOG0302 Ribosome Assembly protein 54 1e-06
Hs5031817 [D] KOG0267 Microtubule severing protein katanin p80 s... 54 2e-06
At1g76260 [S] KOG1007 WD repeat protein TSSC1 WD repeat superfamily 54 2e-06
Hs4505731 [U] KOG0277 Peroxisomal targeting signal type 2 receptor 54 2e-06
At5g67320 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 54 2e-06
Hs19913371 [B] KOG0273 Beta-transducin family (WD-40 repeat) pro... 53 3e-06
Hs15150805 [B] KOG0273 Beta-transducin family (WD-40 repeat) pro... 53 3e-06
Hs4506439 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 53 3e-06
CE24682 [S] KOG1007 WD repeat protein TSSC1 WD repeat superfamily 52 4e-06
CE21113 [A] KOG0284 Polyadenylation factor I complex subunit PFS2 52 4e-06
CE16234 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NU... 52 4e-06
At4g35050 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 52 6e-06
SPAC29A4.08c [R] KOG0289 mRNA splicing factor 51 1e-05
At2g16780 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 51 1e-05
>YDL195w [U] KOG0307 Vesicle coat complex COPII subunit SEC31
Length = 1273
Score = 1052 bits (2721), Expect = 0.0
Identities = 590/1289 (45%), Positives = 779/1289 (59%), Gaps = 79/1289 (6%)
Query: 1 MVKLAEYPRTATFSWSHDRVPVLATGPASGAIDADFXXXXXXXXXXXXXFDGSKPSGSVV 60
MVKLAE+ RTATF+WSHD++P+L +G SG +DA+F D KP S+
Sbjct: 1 MVKLAEFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQ 60
Query: 61 ADGKFNDLDWSGDDKIIAGALENGVVEFFDPK----ALKSVAKIHKHQGPVKTLKFNAKQ 116
D KFNDLDWS ++KIIAGAL+NG +E + A+ S+A+ H VKT+KFNAKQ
Sbjct: 61 VDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQ 120
Query: 117 NNVLVSGGTQGEIFVWDSNKI--GSSDYSPFSAGISNTPIDEVSSLSWNQSLAHVFASAS 174
+NVL SGG GEIF+WD NK S+Y+P + G S + +DEV SL+WNQSLAHVFASA
Sbjct: 121 DNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAG 180
Query: 175 SSGYASVWDLKAKKQVLHLNHSSSTTGIKVPLTVVDWHPXXXXXXXXXXXXDTEPLVLTW 234
SS +AS+WDLKAKK+V+HL+++S +GIK L+VV+WHP D +P +L W
Sbjct: 181 SSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIW 240
Query: 235 DLRNAHVPLKVLSQGHSKGVLSLDWCKQDENLLLSSGRDNTSVLWNPQEGSILTQFAPRG 294
DLRNA+ PL+ L+QGH KG+LSLDWC QDE+LLLSSGRDNT +LWNP+ L+QF RG
Sbjct: 241 DLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARG 300
Query: 295 NWVFKSKFAPEAPDLFASASFDSKIVVQTLQNLSNTLDAQANESKQHASEDEFWNNVTSN 354
NW FK+KFAPEAPDLFA ASFD+KI VQTLQNL+NTLD Q E+KQ SE +FWNNV+
Sbjct: 301 NWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSRE 360
Query: 355 SVDDKPNTVKIQAPKWYGNKSPAAQWAFGGKLVRISDDGKGVSVVKPCISGLEKNQLFDE 414
+KP+ +QAP WYG SPAA WAFGGKLV+I+ DGKGVS+ P ISGLE N E
Sbjct: 361 ESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKISGLESNTTLSE 420
Query: 415 SLKSKDFVKLINKRLSQKINATNEDDWNLLENLSMDGTALYLKDALSLD----DAKEDII 470
+LK+KDF LIN+RL + I+ NE+DWNLLE LSMDGT +LK+AL+ D DA++D
Sbjct: 421 ALKTKDFKPLINQRLVKVIDDVNEEDWNLLEKLSMDGTEEFLKEALAFDNDESDAQDDAN 480
Query: 471 KKSEEDGADFFNQLNDKFVPEGAFKLDFSESMKPLTNFLIKGDLKSALNQALEKDLLLEA 530
+ E+DG +FF Q+ F PEG F L + ++ L+ G++KSA+ +LE DLL+EA
Sbjct: 481 NEKEDDGEEFFQQIETNFQPEGDFSLS-GNIEQTISKNLVSGNIKSAVKNSLENDLLMEA 539
Query: 531 LVIAITSNDALLADKAKNAYFSKHSEQSGLARTLFSVAQRDVEDIVTNIDVSQWKDAVQF 590
+VIA+ SN+ L + KNAYF+K+ +S L+R L+S+++R+V+D+V N+DVSQWK +
Sbjct: 540 MVIALDSNNERLKESVKNAYFAKYGSKSSLSRILYSISKREVDDLVENLDVSQWKFISKA 599
Query: 591 IFNYTKEDISKKNSLLVKLGDRLLHEGNRKDAILLYLSGQSLESIASIWLKEFPELENQL 650
I N DI+++N +L+KLGDRL G+R+D++ LYL+ SL+ +ASIWL EFP+LE++L
Sbjct: 600 IQNLYPNDIAQRNEMLIKLGDRLKENGHRQDSLTLYLAAGSLDKVASIWLSEFPDLEDKL 659
Query: 651 TSQKDTLYEAHLECLTEFVERFTVLSDYLDKGTVKLTNQTLISKFLEFVNVTAANGDFEL 710
T+YEAH ECLTEF+ERFTV S++++ G+ + N+ LI+KFLEF+N+T + G+FEL
Sbjct: 660 KKDNKTIYEAHSECLTEFIERFTVFSNFIN-GSSTINNEQLIAKFLEFINLTTSTGNFEL 718
Query: 711 SLRFLETLPDDNEEVKSEKQRVLIASGKTSTTRSTERTANSTLQSRQGRYGSTSVPTANG 770
+ FL +LP DNEEVK+EK RVLIASGK+ ++ +T + + +Y T+ T
Sbjct: 719 ATEFLNSLPSDNEEVKTEKARVLIASGKSLPAQNP-----ATATTSKAKY--TNAKTNKN 771
Query: 771 APRLSNSGIXXXXXXXXXXXXXXSTAP----NVVPRKPSFVPQTTSAIP--TPNPYAPAA 824
P L G+ P N +P KP +VP TT++ P T YAP +
Sbjct: 772 VPVLPTPGMPSTTSIPSMQAPFYGMTPGASANALPPKP-YVPATTTSAPVHTEGKYAPPS 830
Query: 825 VNQQIPLSVVGSRP-----SYTPPVNPYAQ--------TATSIXXXXXXXXXXXXXXXXX 871
V + S+ PP NPYA + TSI
Sbjct: 831 QPSMASPFVNKTNSSTRLNSFAPPPNPYATATVPATNVSTTSIPQNTFAPIQPGMPIMGD 890
Query: 872 XXXXXXXISG---ASGYSGQTPHLHDKPIDGWNDLPSVSKEKPTRAKAVNTAP---IGMS 925
I + SGQTPHL+ K DGWNDLP KEKP+RAKAV+ AP +
Sbjct: 891 YNAQSSSIPSQPPINAVSGQTPHLNRKANDGWNDLPLKVKEKPSRAKAVSVAPPNILSTP 950
Query: 926 TPSYGTPDLAA-----VPLSRASTNSTLXX--XXXNVRRTPKLTSPPE-----VASPPLP 973
TP G P AA PLSRA ++ ++ R P L + E +++P P
Sbjct: 951 TPLNGIPANAASTMPPPPLSRAPSSVSMVSPPPLHKNSRVPSLVATSESPRASISNPYAP 1010
Query: 974 LKKTNSY-APTVSAVQSSQMPQQI--SNPLMPPASPNPATNGRSFVPPV------NPYSP 1024
+ + + T+S + Q+ SNP PP AT VPP NPY+P
Sbjct: 1011 PQSSQQFPIGTISTANQTSNTAQVASSNPYAPPPQQRVATPLSGGVPPAPLPKASNPYAP 1070
Query: 1025 APSAVTPTGIVPPKXXXXXXXXXXXXXXXXXXXXXRKMNRKSTAVGDAS--AASNLLSSI 1082
+ PP N+ T S SN L+SI
Sbjct: 1071 TATTQPNGSSYPP--------TGPYTNNHTMTSPPPVFNKPPTGPPPISMKKRSNKLASI 1122
Query: 1083 QTKPTPPIHSPAMVDPVA--VQYDQSAVSPTNVEIAAEQ-GAGITESDRPIVEFLTAELQ 1139
+ P+ P + A +Q Q + V +AE I +PIV+FL EL
Sbjct: 1123 EQNPSQGATYPPTLSSSASPLQPSQPPTLASQVNTSAENVSHEIPADQQPIVDFLKEELA 1182
Query: 1140 RVTPLIPQEYTKQLKDCDKRIKILIKHLEHHDLLTQPTIDKLHQIVAFWKEGNYSEAMTI 1199
RVTPL P+EY+KQLKDCDKR+KIL HLE DLLTQPTID LH +VA KE Y EAM I
Sbjct: 1183 RVTPLTPKEYSKQLKDCDKRLKILFYHLEKQDLLTQPTIDCLHDLVALMKEKKYKEAMVI 1242
Query: 1200 HQDLSANHSSEAGNWLTGIKRLMNIAEAT 1228
H +++ NH+ E GNWLTG+KRL+ IAEAT
Sbjct: 1243 HANIATNHAQEGGNWLTGVKRLIGIAEAT 1271
>SPBC8D2.20c [U] KOG0307 Vesicle coat complex COPII subunit SEC31
Length = 1224
Score = 332 bits (852), Expect = 2e-90
Identities = 316/1318 (23%), Positives = 566/1318 (41%), Gaps = 184/1318 (13%)
Query: 2 VKLAEYPRTATFSWS----HDRVPVLATGPASGAIDADFXXXXXXXXXXXXXFDGSKPSG 57
++L + +TAT +WS +D +LA G +G + + KP G
Sbjct: 1 MRLKDISKTATLAWSPRGVNDNQALLALGGYTGTEGSKNSDTLLELWNENP--ESQKPVG 58
Query: 58 SVVADGKFNDLDWSGD-DK---IIAGALENGVVEFFDPKAL-------KSVAKIHKHQGP 106
S+ +F DL W DK +IAG+LE+G + F+DP A+ S+A G
Sbjct: 59 SIDVKTRFYDLAWEKSLDKPMGVIAGSLEDGGIGFWDPAAILKSDEASASIATYKSENGS 118
Query: 107 VK-TLKFNAKQNNVLVSGGTQGEIFVWDSNKIGSSDYSPFSAGISNTPIDEVSSLSWNQS 165
+ L FN Q N+L SG +G+++VWD PF+ N EV +SWN
Sbjct: 119 ILGPLDFNRLQPNLLASGDNKGDVWVWDIKH----PQQPFALPKQNRS-SEVHVVSWNNK 173
Query: 166 LAHVFASASSSGYASVWDLKAKKQVLHLNH--SSSTTGIKVPLTVVDWHPXXXXXXXXXX 223
++H+ AS +++ Y +VWD+K K+QVL+L++ ++ + + + WHP
Sbjct: 174 VSHILASGNATEYTTVWDVKLKRQVLNLSYLGAAGVSAATGAVNSIAWHPNNATRLATAI 233
Query: 224 XXDTEPLVLTWDLRNAHVPLKVLSQGHSKGVLSLDWCKQDENLLLSSGRDNTSVLWNPQE 283
+ P++LTWDLR VP +L+ GH K LSL WC +D LLSSG+D +++WN +
Sbjct: 234 DDNRNPIILTWDLRQPTVPQNILT-GHQKAALSLSWCPEDPTFLLSSGKDGRAMVWNVET 292
Query: 284 GSILTQFAPRGNWVFKSKFAPEAPDLFASASFDSKIVVQTLQNLSNTLDAQAN-ESKQHA 342
G L F GNW KS + P + A AS + K+ + ++Q+ + +A+ +
Sbjct: 293 GESLGSFPRSGNWYTKSSWCPSNSNRVAVASLEGKVSIFSIQSTNTDKSQEASIKGATSI 352
Query: 343 SEDEFWNNVTSNSVDDKPNTVKIQAPKWYGNKSP-AAQWAFGGKLVRISDDGKGVSVVKP 401
++EF+NN+ S + +P+ APKW+ K P A++ F K+V S + K V++
Sbjct: 353 DDNEFFNNLPSIAGSQEPSFSLPLAPKWF--KVPVGARFGFPNKIVSFSPNSKEVTITSA 410
Query: 402 ---------------------------CISGLEKNQLFDESLKSKDFVKLINKRLSQKIN 434
C G+E++ +E++ K + ++KR S+
Sbjct: 411 PDEVEQDEAKSFHSSAKFQTEKEITDFCQKGVEESASEEEAINWK-LLMAVSKRASRSKF 469
Query: 435 A-----------TNEDDWNLLENLSMDGTALYLKDALSLDDAKEDIIKKSEEDGADFFNQ 483
A +EDD + E+++ KD+ + ++ ++ ++ +D + F+ +
Sbjct: 470 AELLGYKTLKPKNDEDDSKVDESVA--------KDSTTPNELSKNANNENYDDDSSFYGK 521
Query: 484 L------------NDKFVPEGAFKL---DFSESMKPLTNFLIKGDLKSALNQALEKDLLL 528
L D + + +FK+ + S+ K +T L+ GD+ SA+ LE+ +
Sbjct: 522 LAESVQEVSIADKKDAEIVKDSFKIFNPEDSDLEKNITEALLTGDVLSAVKACLEEKKIS 581
Query: 529 EALVIAITSNDALLADKAKNAYFSKHSEQSGLARTLFSVAQRDVEDIVTNIDVSQWKDAV 588
EAL ++ T ++A++ + R +A D++++V N +VS+WKD
Sbjct: 582 EALFLS-TFGGKECRKCVRDAFYELQEHKPSYMRLSACIADNDLQNVVDNAEVSEWKDIF 640
Query: 589 QFIFNY-TKEDISKKNSLLVKLGDRLLHEGNRKDAILLYLSGQSLESIASIWLKEFPELE 647
FI Y T ++ + S L + + L E + + A Y++ +SL+S A++WLK+
Sbjct: 641 VFICTYATDDEFAPLCSTLGQRLEDLEDEKSIRSAEFCYIASKSLQSYANLWLKQL--AT 698
Query: 648 NQLTSQKDTLYEAHLECLTEFVER---FTVLSDYLD---KGTVKLTNQTLISKFLEFVNV 701
+ TS+ + Y A++E LT+ +++ F + Y D T L ++ + +
Sbjct: 699 STKTSKAASAYGAYVEQLTKLMDKVSMFRSIVVYKDDELSATKDWKLAGLYEVYIAYAKI 758
Query: 702 TAANGDFELSLRFLETLPDDNEEVKSEKQR--VLIASGKTSTTRSTERTANSTLQSRQGR 759
+A+G F+ ++ +L +P + K E QR +L+ ++T + +Q + +
Sbjct: 759 LSASGKFDDAMSYLNLVPTEFPGAKEEIQRLTMLLEPHAVPPIHQIKQTGYAPVQPKTSQ 818
Query: 760 YGSTSVPTANGAPRLSNSGIXXXXXXXXXXXXXXSTAPNVVPRKPSFVPQTTSAIPTPNP 819
S+ +PT PR ++ +T+ ++ P +P +++ T
Sbjct: 819 -ASSILPT---VPRTTS-----------YTSPYATTSSHITPADVHPLPPPSTS--TTAG 861
Query: 820 YAPAAVNQQIPLSVVGSRPSYTPPVNPY-----AQTATSIXXXXXXXXXXXXXXXXXXXX 874
+ A + Q+P+ + PS P +P+ AQ A
Sbjct: 862 WNDAPMLGQLPMR--RAAPSMAPVRSPFPGASSAQPAAMSRTSSVSTLPPPPPTASMTAS 919
Query: 875 XXXXISGASGYSGQTPHLHDKPIDGWNDLPSVSKEKPTR--AKAVNTAPIGMSTPSYGTP 932
S G+T H P +P V + +P+ ++ +P
Sbjct: 920 APAIASPPPPKVGETYH---PPTASGTRVPPVQQPSHPNPYTPVAPQSPVAAASRISSSP 976
Query: 933 DLAAVPLSRASTNSTLXXXXXNVRRTPKLTSPPEVASPP-LPLKKTNSYAPTVSAVQSSQ 991
++ P S T + N T K ++ PP P + PT S S+
Sbjct: 977 NM---PPSNPYTPIAVASSTVNPAHTYKPHGGSQIVPPPKQPANRVVPLPPTASQRASAY 1033
Query: 992 MPQQISNPLMPPASPNPATNGRSFVPPVNPYSPAPSAVTPTGIVPPKXXXXXXXXXXXXX 1051
P +S P SP+ +PPV+ P SA P PP
Sbjct: 1034 EPPTVSVPSPSALSPSVTPQ----LPPVSSRLPPVSATRPQIPQPPPV------------ 1077
Query: 1052 XXXXXXXXRKMNRKSTAVGDASAASNLLSSIQTKPTPPIHSPAMVDPVAVQYDQSAVSPT 1111
STA+ +SA S PPI + A A P
Sbjct: 1078 --------------STALPSSSAVSR----------PPIATSAGRSSTAASTSAPLTYP- 1112
Query: 1112 NVEIAAEQGAGITESDRPIVEFLTAELQRVTPLIPQEYTKQLKDCDKRIKILIKHLEHHD 1171
A + I + RPI E L AELQRV+ +P + ++ + D +KR+ +L L + +
Sbjct: 1113 -----AGDRSHIPGNLRPIYEMLNAELQRVSQSLPPQMSRVVHDTEKRLNMLFDRL-NSN 1166
Query: 1172 LLTQPTIDKLHQIVAFWKEGNYSEAMTIHQDLSANHSSEAGNWLTGIKRLMNIAEATS 1229
+L++P D+L + +Y A I ++ + +W+ G+ RL+ ++++T+
Sbjct: 1167 VLSKPLTDELLALATSLNAHDYQTASNIQTNIVTTLGDQCEHWIVGVTRLITLSKSTT 1224
>Hs7705258 [U] KOG0307 Vesicle coat complex COPII subunit SEC31
Length = 1181
Score = 276 bits (707), Expect = 1e-73
Identities = 313/1315 (23%), Positives = 528/1315 (39%), Gaps = 230/1315 (17%)
Query: 2 VKLAEYPRTATFSWS--HDRVPVLATGPASGAIDADFXXXXXXXXXXXXXFDGS---KPS 56
+KL E RTA +WS + LATG ++ +DA F D S K
Sbjct: 1 MKLKEVDRTAMQAWSPAQNHPIYLATGTSAQQLDATFSTNASLEIFELDLSDPSLDMKSC 60
Query: 57 GSVVADGKFNDLDWSG---DDK------IIAGALENGVVEFFDPKALKS------VAKIH 101
+ + +++ L W D K +IAG ENG + +DP + + +A+
Sbjct: 61 ATFSSSHRYHKLIWGPYKMDSKGDVSGVLIAGG-ENGNIILYDPSKIIAGDKEVVIAQND 119
Query: 102 KHQGPVKTLKFNAKQNNVLVSGGTQGEIFVWDSNKIGSSDYSPFSAGISNTPIDEVSSLS 161
KH GPV+ L N Q N++ SG + EI++WD N + P + G P +++S ++
Sbjct: 120 KHTGPVRALDVNIFQTNLVASGANESEIYIWDLNNFAT----PMTPGAKTQPPEDISCIA 175
Query: 162 WNQSLAHVFASASSSGYASVWDLKAKKQVLHLNHSSSTTGIKVPLTVVDWHPXXXXXXXX 221
WN+ + H+ ASAS SG A+VWDL+ + ++ ++ S+ ++ + + WHP
Sbjct: 176 WNRQVQHILASASPSGRATVWDLRENEPIIKVSDHSN----RMHCSGLAWHPDVATQMVL 231
Query: 222 XXXXDTEPLVLTWDLRNAHVPLKVLSQGHSKGVLSLDWCKQDENLLLSSGRDNTSVLWNP 281
D P++ WDLR A PL+VL + H++G+L++ W D LLLS G+D + NP
Sbjct: 232 ASEDDRLPVIQMWDLRFASSPLRVL-ENHARGILAIAWSMADPELLLSCGKDAKILCSNP 290
Query: 282 QEGSILTQFAPRGNWVFKSKFAPEAPDLFASASFDSKIVVQTLQNLSNTLDAQANESKQH 341
G +L + W F ++ P P + ++ASFD +I V ++ S Q K
Sbjct: 291 NTGEVLYELPTNTQWCFDIQWCPRNPAVLSAASFDGRISVYSIMGGSTDGLRQKQVDKLS 350
Query: 342 ASE---DEFWNNVTSNSVDDKPNTVKI-------QAPKWYGNKSPAAQWAFGGKLVRISD 391
+S D F + T + + PKW + A ++FGGKLV +
Sbjct: 351 SSFGNLDPFGTGQPLPPLQIPQQTAQHSIVLPLKKPPKWI-RRPVGASFSFGGKLVTFEN 409
Query: 392 ----DGKG-----------VSVVKPCISGLEKNQLFDESLKSKDFVKLINKRLSQKINAT 436
+G +S V L ++ ++++S+ F+ K++
Sbjct: 410 VRMPSHQGAEQQQQQHHVFISQVVTEKEFLSRSDQLQQAVQSQGFINYCQKKIDASQTEF 469
Query: 437 NEDDWNLLE-NLSMDGTALYLKDALSLDDAKEDIIKKSEEDGADFFNQLNDKFVPE--GA 493
++ W+ L+ N D YL+ L KED+ KK ++ + +F+P G
Sbjct: 470 EKNVWSFLKVNFEDDSRGKYLE---LLGYRKEDLGKKHIKEEKE-----ESEFLPSSGGT 521
Query: 494 FKLDFSESMKPL-TNFLIKGDLKSALNQALEKDLLLEALVIAITSNDALLADKAKNAYFS 552
F + S + L T L+ G+ +SA++ L + + +A+++AI LLA + + YF+
Sbjct: 522 FNISVSGDIDGLITQALLTGNFESAVDLCLHDNRMADAIILAIAGGQELLA-RTQKKYFA 580
Query: 553 KHSEQSGLARTLFSVAQRDVEDIVTNIDVSQWKDAVQFIFNYTKEDISKKNSLLVKLGDR 612
K QS + R + +V ++ ++IV + D+ W++A+ + Y K D + ++L LG R
Sbjct: 581 K--SQSKITRLITAVVMKNWKEIVESCDLKNWREALAAVLTYAKPD--EFSALCDLLGTR 636
Query: 613 LLHEGN---RKDAILLYLSGQSLESIASIWLKEFPELENQLTSQKDTLYEAHLECLTEFV 669
L +EG+ + A L Y+ ++E + + W T +D + L+ L E V
Sbjct: 637 LENEGDSLLQTQACLCYICAGNVEKLVACW-----------TKAQDGSHPLSLQDLIEKV 685
Query: 670 ---ERFTVLSDYLDKGTVKLTNQTLISKFLEFVNVTAANGDFELSLRFLETLPDDNEE-- 724
+ L+ +D TV + L +K ++ N+ AA G +L FL PD+ +
Sbjct: 686 VILRKAVQLTQAMDTSTVGVL---LAAKMSQYANLLAAQGSIAAALAFL---PDNTNQPN 739
Query: 725 VKSEKQRVLIASGKTSTTRSTERTANSTLQSRQGRYGSTSVPTANGAPRLSNS-----GI 779
+ + R+ A G+ + + Q +GR G V + PR+ G
Sbjct: 740 IMQLRDRLCRAQGEPVAGHESPKIPYEKQQLPKGRPGP--VAGHHQMPRVQTQQYYPHGE 797
Query: 780 XXXXXXXXXXXXXXSTAPNVVPRKPSFVPQTTSAIPTPNPYAPAAVNQQIPLSVVGS--- 836
A +P P + P P PY PA Q P GS
Sbjct: 798 NPPPPGFIMHGNVNPNASGQLPTSPGHMHTQVPPYPQPQPYQPA---QPYPFGTGGSAMY 854
Query: 837 ---RPSYTPPVNPYAQTATSIXXXXXXXXXXXXXXXXXXXXXXXXISGASGYSGQTP--- 890
+P P N Y T IS AS Y+GQ+
Sbjct: 855 RPQQPVAPPTSNAYPNTP--------------------------YISSASSYTGQSQLYA 888
Query: 891 --HLHDKPIDGWNDLPSVSKEKPTRAKAV----------NTAPIGMSTPSYGT-PDLAAV 937
H P P+ S P + A +++ + + GT P + +
Sbjct: 889 AQHQASSPTSS----PATSFPPPPSSGASFQHGGPGAPPSSSAYALPPGTTGTLPAASEL 944
Query: 938 PLSRASTNSTLXXXXXNVRRTPKLTSPPEVASPPLPLKKTNSYAPTVSAVQSSQMPQQIS 997
P S+ + + R PK PE PP+P+ T+ + QS + QQ
Sbjct: 945 PASQRTGPQNGWNDPPALNRVPKKKKMPENFMPPVPI--TSPIMNPLGDPQSQMLQQQ-- 1000
Query: 998 NPLMPPASPNPATNGRSF----VPPVNPYSPAPSAVTPTGIVPPKXXXXXXXXXXXXXXX 1053
P++P P ++ SF +P P+ + TG+ P
Sbjct: 1001 -----PSAPVPLSSQSSFPQPHLPGGQPFHGVQQPLGQTGMPP----------------- 1038
Query: 1054 XXXXXXRKMNRKSTAVGDASAASNLLSSIQTKPTPPIHSPAMVDPVAVQYDQSAVSPTNV 1113
++ + + N +Q+ PT I + D+ + T
Sbjct: 1039 -------SFSKPNIEGAPGAPIGNTFQHVQSLPTKKITKKPIP-------DEHLILKTTF 1084
Query: 1114 EIAAEQGAGITESDRPIVEFLTAELQRVTPLIPQEYTK-QLKDCDKRIKILIKHLEHHDL 1172
E +QR TK +L D KR++ L L L
Sbjct: 1085 EDL---------------------IQRCLSSATDPQTKRKLDDASKRLEFLYDKLREQTL 1123
Query: 1173 LTQPTIDK-LHQIVAFWKEGNYSEAMTIHQDL-SANHSSEAGNWLTGIKRLMNIA 1225
PTI LH I + NYSE +T+H + S ++ SE ++ +K ++ A
Sbjct: 1124 --SPTITSGLHNIARSIETRNYSEGLTMHTHIVSTSNFSETSAFMPVLKVVLTQA 1176
>Hs7662370 [U] KOG0307 Vesicle coat complex COPII subunit SEC31
Length = 1220
Score = 268 bits (684), Expect = 5e-71
Identities = 316/1349 (23%), Positives = 534/1349 (39%), Gaps = 259/1349 (19%)
Query: 2 VKLAEYPRTATFSWS--HDRVPVLATGPASGAIDADFXXXXXXXXXXXXXFDGS---KPS 56
+KL E RTA +WS + LATG ++ +DA F D S K
Sbjct: 1 MKLKEVDRTAMQAWSPAQNHPIYLATGTSAQQLDATFSTNASLEIFELDLSDPSLDMKSC 60
Query: 57 GSVVADGKFNDLDWSG---DDK------IIAGALENGVVEFFDPKALKS------VAKIH 101
+ + +++ L W D K +IAG ENG + +DP + + +A+
Sbjct: 61 ATFSSSHRYHKLIWGPYKMDSKGDVSGVLIAGG-ENGNIILYDPSKIIAGDKEVVIAQND 119
Query: 102 KHQGPVKTLKFNAKQNNVLVSGGTQGEIFVWDSNKIGSSDYSPFSAGISNTPIDEVSSLS 161
KH GPV+ L N Q N++ SG + EI++WD N + P + G P +++S ++
Sbjct: 120 KHTGPVRALDVNIFQTNLVASGANESEIYIWDLNNFAT----PMTPGAKTQPPEDISCIA 175
Query: 162 WNQSLAHVFASASSSGYASVWDLKAKKQVLHLNHSSSTTGIKVPLTVVDWHPXXXXXXXX 221
WN+ + H+ ASAS SG A+VWDL+ + ++ ++ S+ ++ + + WHP
Sbjct: 176 WNRQVQHILASASPSGRATVWDLRKNEPIIKVSDHSN----RMHCSGLAWHPDVATQMVL 231
Query: 222 XXXXDTEPLVLTWDLRNAHVPLKVLSQGHSKGVLSLDWCKQDENLLLSSGRDNTSVLWNP 281
D P++ WDLR A PL+VL + H++G+L++ W D LLLS G+D + NP
Sbjct: 232 ASEDDRLPVIQMWDLRFASSPLRVL-ENHARGILAIAWSMADPELLLSCGKDAKILCSNP 290
Query: 282 QEGSILTQFAPRGNWVFKSKFAPEAPDLFASASFDSKIVVQTLQNLSNTLDAQANESKQH 341
G +L + W F ++ P P + ++ASFD +I V ++ S Q K
Sbjct: 291 NTGEVLYELPTNTQWCFDIQWCPRNPAVLSAASFDGRISVYSIMGGSTDGLRQKQVDKLS 350
Query: 342 AS---EDEFWNNVTSNSVDDKPNTVK-------IQAPKWYGNKSPAAQWAFGGKLVRISD 391
+S D F + T + + PKW + A ++FGGKLV +
Sbjct: 351 SSFGNLDPFGTGQPLPPLQIPQQTAQHSIVLPLKKPPKWI-RRPVGASFSFGGKLVTFEN 409
Query: 392 ----DGKG-----------VSVVKPCISGLEKNQLFDESLKSKDFVKLINKRLSQKINAT 436
+G +S V L ++ ++++S+ F+ K++
Sbjct: 410 VRMPSHQGAEQQQQQHHVFISQVVTEKEFLSRSDQLQQAVQSQGFINYCQKKIDASQTEF 469
Query: 437 NEDDWNLLE-NLSMDGTALYLKDALSLDDAKEDIIKK-----SEEDGADFFNQLND---- 486
++ W+ L+ N D YL+ L KED+ KK ++ DGA+ + +D
Sbjct: 470 EKNVWSFLKVNFEDDSRGKYLE---LLGYRKEDLGKKIALALNKVDGANVALKDSDQVAQ 526
Query: 487 -------------------------KFVPE--GAFKLDFSESMKPL-TNFLIKGDLKSAL 518
+F+P G F + S + L T L+ G+ +SA+
Sbjct: 527 SDGEESPAAEEQLLGEHIKEEKEESEFLPSSGGTFNISVSGDIDGLITQALLTGNFESAV 586
Query: 519 NQALEKDLLLEALVIAITSNDALLADKAKNAYFSKHSEQSGLARTLFSVAQRDVEDIVTN 578
+ L + + +A+++AI LLA + + YF+K QS + R + +V ++ ++IV +
Sbjct: 587 DLCLHDNRMADAIILAIAGGQELLA-RTQKKYFAK--SQSKITRLITAVVMKNWKEIVES 643
Query: 579 IDVSQWKDAVQFIFNYTKEDISKKNSLLVKLGDRLLHEGN---RKDAILLYLSGQSLESI 635
D+ W++A+ + Y K D + ++L LG RL +EG+ + A L Y+ ++E +
Sbjct: 644 CDLKNWREALAAVLTYAKPD--EFSALCDLLGTRLENEGDSLLQTQACLCYICAGNVEKL 701
Query: 636 ASIWLKEFPELENQLTSQKDTLYEAHLECLTE---FVERFTVLSDYLDKGTVKLTNQTLI 692
+ W T +D + L+ L E + + L+ +D TV + L
Sbjct: 702 VACW-----------TKAQDGSHPLSLQDLIEKVVILRKAVQLTQAMDTSTVGV---LLA 747
Query: 693 SKFLEFVNVTAANGDFELSLRFLETLPDDNEE--VKSEKQRVLIASGKTSTTRSTERTAN 750
+K ++ N+ AA G +L F LPD+ + + + R+ A G+ + +
Sbjct: 748 AKMSQYANLLAAQGSIAAALAF---LPDNTNQPNIMQLRDRLCRAQGEPVAGHESPKIPY 804
Query: 751 STLQSRQGRYGSTSVPTANGAPRLSNS-----GIXXXXXXXXXXXXXXSTAPNVVPRKPS 805
Q +GR G V + PR+ G A +P P
Sbjct: 805 EKQQLPKGRPG--PVAGHHQMPRVQTQQYYPHGENPPPPGFIMHGNVNPNASGQLPTSPG 862
Query: 806 FVPQTTSAIPTPNPYAPAAVNQQIPLSVVGS------RPSYTPPVNPYAQTATSIXXXXX 859
+ P P PY PA Q P GS +P P N Y T
Sbjct: 863 HMHTQVPPYPQPQPYQPA---QPYPFGTGGSAMYRPQQPVAPPTSNAYPNTP-------- 911
Query: 860 XXXXXXXXXXXXXXXXXXXISGASGYSGQT-----PHLHDKPIDGWNDLPSVSKEKPTRA 914
IS AS Y+GQ+ H P P+ S P +
Sbjct: 912 ------------------YISSASSYTGQSQLYAAQHQASSPTSS----PATSFPPPPSS 949
Query: 915 KA----------VNTAPIGMSTPSYGT-PDLAAVPLSRASTNSTLXXXXXNVRRTPKLTS 963
A +++ + + GT P + +P S+ + + R PK
Sbjct: 950 GASFQHGGPGAPPSSSAYALPPGTTGTLPAASELPASQRTGPQNGWNDPPALNRVPKKKK 1009
Query: 964 PPEVASPPLPLKKTNSYAPTVSAVQSSQMPQQISNPLMPPASPNPATNGRSF----VPPV 1019
PE PP+P+ T+ + QS + QQ P++P P ++ SF +P
Sbjct: 1010 MPENFMPPVPI--TSPIMNPLGDPQSQMLQQQ-------PSAPVPLSSQSSFPQPHLPGG 1060
Query: 1020 NPYSPAPSAVTPTGIVPPKXXXXXXXXXXXXXXXXXXXXXRKMNRKSTAVGDASAASNLL 1079
P+ + TG+ P ++ + + N
Sbjct: 1061 QPFHGVQQPLGQTGMPP------------------------SFSKPNIEGAPGAPIGNTF 1096
Query: 1080 SSIQTKPTPPIHSPAMVDPVAVQYDQSAVSPTNVEIAAEQGAGITESDRPIVEFLTAELQ 1139
+Q+ PT I + D+ + T E +Q
Sbjct: 1097 QHVQSLPTKKITKKPIP-------DEHLILKTTFEDL---------------------IQ 1128
Query: 1140 RVTPLIPQEYTK-QLKDCDKRIKILIKHLEHHDLLTQPTIDK-LHQIVAFWKEGNYSEAM 1197
R TK +L D KR++ L L L PTI LH I + NYSE +
Sbjct: 1129 RCLSSATDPQTKRKLDDASKRLEFLYDKLREQTL--SPTITSGLHNIARSIETRNYSEGL 1186
Query: 1198 TIHQDL-SANHSSEAGNWLTGIKRLMNIA 1225
T+H + S ++ SE ++ +K ++ A
Sbjct: 1187 TMHTHIVSTSNFSETSAFMPVLKVVLTQA 1215
>7303990 [U] KOG0307 Vesicle coat complex COPII subunit SEC31
Length = 1240
Score = 236 bits (602), Expect = 2e-61
Identities = 310/1324 (23%), Positives = 522/1324 (39%), Gaps = 192/1324 (14%)
Query: 2 VKLAEYPRTATFSWS--HDRVPVLATGPASGAID--ADFXXXXXXXXXXXXXFDGSKPSG 57
+K+ E +T +WS + +LA G A+ D A+ +D +
Sbjct: 1 MKIKELQKTVNIAWSPAQQQQILLAAGTAAQQFDSNANSTLELYSPNFSDATYD-LELRA 59
Query: 58 SVVADGKFNDLDWSG----DDKIIAGALENGVVEFFDPKALKS------VAKIHKHQGPV 107
SV + KF L WS +I G E G + + L + + + KH G V
Sbjct: 60 SVSSQYKFQKLIWSPVGPHPSGLIVGGCEAGQINIYSADKLLAGKEEPLLKRQDKHTGAV 119
Query: 108 KTLKFNAKQNNVLVSGGTQGEIFVWDSNKIGSSDYSPFSAGISNTPIDEVSSLSWNQSLA 167
L FN QNN+L S ++ EI +WD N +S S G P+++V +++WN+ +
Sbjct: 120 SGLDFNPFQNNLLASCASESEILIWDLNNPETS----MSPGTKTQPLEDVKNVAWNRQVQ 175
Query: 168 HVFASASSSGYASVWDLKAKKQVLHLNHSSSTTGIKVPLTVVDWHPXXXXXXXXXXXXDT 227
H+ AS S+ +WDL+ +Q++ L+ S S +V ++WHP D
Sbjct: 176 HILASVFSTRCV-IWDLRKSQQIIKLSDSQS----RVRWHAIEWHPEAATQVWLASEDDQ 230
Query: 228 EPLVLTWDLRNAHVPLKVLSQGHSKGVLSLDWCKQDENLLLSSGRDNTSVLWNPQ----E 283
P+V WDLR A P K Q H +GVL + WC QD +L++S G+DN WNP E
Sbjct: 231 APVVQLWDLRYATAPAKTY-QIHERGVLGMSWCLQDNDLMVSCGKDNRIYCWNPNTKIPE 289
Query: 284 GSILTQFAPRGNWVFKSKFAPEAPDLFASASFDSKIVVQTLQNLSNTLDAQANE-SKQHA 342
G IL++ A +W +F P P L ASAS + + + +L ++ L AN+ +
Sbjct: 290 GEILSEVATTASWYSDVQFCPRNPALIASASLEGAVSIYSLHGGTHHLVQTANKIADSFP 349
Query: 343 SEDEFWNNVTSNSVDDKPNTVKIQAPKWYGNKSPAAQWAFGGKLVRISDDGKGVSVVKPC 402
D+F APKW A + FGGKLV + K V V +
Sbjct: 350 GMDQFAQEPIPQQATQVVYHDLAHAPKWMKRPCGVA-FGFGGKLVSFNGTSKTVKVQQLT 408
Query: 403 ISG--LEKNQLFDESLKSKDFVKLINKRLSQ--------------------------KIN 434
+++ + SL ++ +R + +
Sbjct: 409 TESALVDRANALERSLVDANYSDYCRQRADETPDQHGRYIWYFIKANFELNPKEEMLNLL 468
Query: 435 ATNEDDWNLLEN---LSMDGTALYLKDALSLDDAKEDIIKKSEEDGADFFNQLNDKFV-- 489
N+DD + N DG + D L+ + + ++ DG +Q ++ F
Sbjct: 469 GYNKDDIDSKFNKFIKETDGNSHSDVDTLTTRISTLTHTQDNKFDGNAIDSQNHNDFATP 528
Query: 490 PEGAFKL---DFSESMKPLTNFLIKGDLKSALNQALEKDLLLEALVIAITSNDALLADKA 546
P FK+ D S+S+ + ++ G++ +A+ LE + EAL+IA T+ L ++
Sbjct: 529 PRPQFKVPSGDHSDSL--IAEAILTGNVDAAVELCLEAQRIPEALIIASTAGIETL-NRT 585
Query: 547 KNAYFSKHSEQSGLARTLFSVAQRDVEDIVTNIDVSQWKDAVQFIFNYTKEDISKKNSLL 606
+ Y + +++ L+ + ++ RD D V V WK+A+ +++ K +
Sbjct: 586 QTRYLLQ--QKNELSHVISALVSRDWLDFVNRCTVDSWKEALVAALKHSER---KVVDIC 640
Query: 607 VKLGDRLLHE-----GNRKDAILLYLSGQSLESIASIWLKEFPELENQLTSQKDTLYEAH 661
+LGDRLL E ++A+L Y+ S++ + + W + LE Q K E
Sbjct: 641 ERLGDRLLSECASSAEFTRNAMLCYICAGSIDKLVTAWY-QLKRLEQQNPGYKPNTTE-- 697
Query: 662 LECLTEFVERFTVLSDYLDKGTVKLTNQTLISKFL-EFVNVTAANGDFELSLRFLETL-- 718
L + E ++ L++ + + + FL E+ + A+ G +L+++ TL
Sbjct: 698 ---LQDLAEMVMLMCKSLEQQGISVDLAGRFAGFLTEYGGLLASQGALTAALQYITTLGG 754
Query: 719 ---PDDNEEVKSEKQRVLIASGKTST-TRSTERTANSTLQSRQGRYGSTSVPTANGAPRL 774
+++ ++S + R+ A T ++ A Q +GR GS S P + AP
Sbjct: 755 GAAASESDVLQSLRDRINNAVNLDYTQPQAAVAAAPHGYQPTRGR-GSFSQPQPS-AP-- 810
Query: 775 SNSGIXXXXXXXXXXXXXXSTAPN--VVPRKPSFVPQTTSAIP-TPNPYAPAAVNQQIPL 831
PN P P+ VP ++ P P AP + P
Sbjct: 811 ----------------MPYGQPPNQYAQPSWPAQVPPLQTSYPGAQQPQAPPQIFNPQP- 853
Query: 832 SVVGSRPSYTPPVNPYAQTATSIXXXXXXXXXXXXXXXXXXXXXXXXISGASGYSGQTPH 891
V P PP P + ++S SG SG SG++ +
Sbjct: 854 --VKPEPLAQPP-RPLSNASSS---------------GGPPPAGGASSSGGSGLSGRSKY 895
Query: 892 LHDKPIDGWNDLPSVSKEKPTRAKAVNTAPIGMSTPSY------GTPDLAAVPLSRASTN 945
+ D PSV+ PT + + P+ PS G P A P S + N
Sbjct: 896 VLD---------PSVA--APTSSYGMPYNPVPAPVPSAVPFGGGGVPGPAPQPASVPTYN 944
Query: 946 STLXXXXXNVRRTPKLTSPPEVASPPLPLKKTNSYAPTVSAVQSSQMPQQISNPLMPPAS 1005
S P + P SP +P ++ N + P V+ +++ MP P++
Sbjct: 945 SNA------FNTNPIAAAQPYNPSPLMPAQQ-NQFVPGVNPIET--MPPPAVPPVIQNVQ 995
Query: 1006 PNPATNGRSFVPPVNPYSPAPSAVTPTGIVPPKXXXXXXXXXXXXXXXXXXXXXRKMNRK 1065
NP PP S AP P +V P +
Sbjct: 996 RNPTPPPGWNDPPALKSSRAPK---PKPVVEPSAAIFHPLFPVDPNQNQNGYVDPSQYQH 1052
Query: 1066 STAVGDASAASNLLSSIQTKP-TPPIHSPAMVDPVAVQYDQSAVSPTNVEIAAEQGAGIT 1124
+ +G ++ P H + + P Q + N + +Q G T
Sbjct: 1053 AAPLGGVPNTYYNPAAFNNNPQQQQQHQQSYLQP---QQPAPGIQQPNWQ-GQQQTIGYT 1108
Query: 1125 ESDRPIVEFLTAELQRVTPLIPQEY------TKQLKD-C-----DKRIK----ILIKHLE 1168
E PI + + P +P+EY ++LK+ C D R K ++K LE
Sbjct: 1109 EQPAPIQQQRQPAPPKEKPPLPEEYIYLQTVLEELKNRCLGATNDPRTKRKFVDVVKRLE 1168
Query: 1169 H------HDLLTQPTIDKLHQIVAFWKEGNYSEAMTIHQDLS-ANHSSEAGNWLTGIKRL 1221
+ LT T+ L+QIV + + +Y+ AM IH ++ ++ ++ G+K L
Sbjct: 1169 NLYDCLRDGKLTPTTVQYLNQIVQYIQISDYANAMEIHTQIAFGTDFAQCAGFMQGLKVL 1228
Query: 1222 MNIA 1225
+ A
Sbjct: 1229 LQSA 1232
>At3g63460 [U] KOG0307 Vesicle coat complex COPII subunit SEC31
Length = 1097
Score = 227 bits (578), Expect = 1e-58
Identities = 200/843 (23%), Positives = 360/843 (41%), Gaps = 146/843 (17%)
Query: 9 RTATFSWSHDRVPVLATGPASGAIDADFXXXXXXXXXXXXXFDGSKPS---GSVVADGKF 65
R+A+ + + D P +A G +GA+D F + G + + +F
Sbjct: 9 RSASVALAPD-APYMAAGTMAGAVDLSFSSSANLEIFKLDFQSDDRDLPLVGEIPSSERF 67
Query: 66 NDLDW----SGDDK----IIAGALENGVVEFFDPKALKS--------VAKIHKHQGPVKT 109
N L W SG ++ +IAG L +G ++ ++P +L V + H+GPV+
Sbjct: 68 NRLAWGRNGSGSEEFALGLIAGGLVDGNIDLWNPLSLIGSQPSENALVGHLSVHKGPVRG 127
Query: 110 LKFNAKQNNVLVSGGTQGEIFVWDSNKIGSSDYSPFSAGISNTPIDEVSSLSWNQSLAHV 169
L+FNA +N+L SG GEI +WD K + P G + E+S +SWN+ + +
Sbjct: 128 LEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQGEISFISWNRKVQQI 187
Query: 170 FASASSSGYASVWDLKAKKQVLHLNHSSSTTGIKVPLTVVDWHPXXXXXXXXXXXXDTEP 229
AS S +G +WDL+ +K +++ S ++ +V+ W+P D+ P
Sbjct: 188 LASTSYNGTTVIWDLRKQKPIINFADS-----VRRRCSVLQWNPNVTTQIMVASDDDSSP 242
Query: 230 LVLTWDLRNAHVPLKVLSQGHSKGVLSLDWCKQDENLLLSSGRDNTSVLWNPQEGSILTQ 289
+ WD+RN P++ + GH +GV++++WC D + LL+ +DN ++ W+ I+ +
Sbjct: 243 TLKLWDMRNIMSPVREFT-GHQRGVIAMEWCPSDSSYLLTCAKDNRTICWDTNTAEIVAE 301
Query: 290 FAPRGNWVFKSKFAPEAPDLFASASFDSKIVVQTLQNLSNTLDAQANESKQHASEDEFWN 349
NW F + P+ P + +++SFD KI + ++ S+ E+ F
Sbjct: 302 LPAGNNWNFDVHWYPKIPGVISASSFDGKIGIYNIEGC----------SRYGVEENNF-- 349
Query: 350 NVTSNSVDDKPNTVKIQAPKWYGNKSPAAQWAFGGKLV--RISDDGKGVSVVKPCI--SG 405
T ++APKWY + A + FGGKLV KG S + + S
Sbjct: 350 -----------GTAPLKAPKWY-KRPVGASFGFGGKLVSCHARAPAKGTSSILSEVEQSL 397
Query: 406 LEKNQLFDESLKSKDFVK---LINKRLSQKINATNEDDWNLL------------------ 444
+ + F+ ++++ D L K+ + + ++ W LL
Sbjct: 398 VSRTSEFEAAIENGDMTSLRGLCEKKSEETESEEEKETWGLLKIMFEEEGTSRTKLISHL 457
Query: 445 -------------ENLSMDGTALYLK----DALSLDDAKEDIIKKSEEDGADFFNQLNDK 487
+ LS D + L+ DAL LDD+ E + ++G DFFN K
Sbjct: 458 GFTLPVAEKDQAVDGLSSDLNGIRLEDTAADALDLDDSNE-AAAFAMDNGEDFFNNFPAK 516
Query: 488 -----------FVPEGAFKLDFS--------------ESMKP-----LTNFLIKGDLKSA 517
F+P DFS ES P + LI GD K A
Sbjct: 517 PDTPVSTSAKDFMPSDT---DFSTKGEETQEMQEEEEESSDPVFDNAIQRALIVGDYKEA 573
Query: 518 LNQALEKDLLLEALVIAITSNDALLADKAKNAYFSKHSEQSGLARTLFSVAQRDVEDIVT 577
++Q + + + +ALVIA AL + + Y S + + + ++ D+ ++
Sbjct: 574 VDQCITANKMADALVIAHVGGTALW-ESTREKYLKTSS--APYMKVVSAMVNNDLRSLIY 630
Query: 578 NIDVSQWKDAVQFIFNYTKEDISKKNSLLVKLGDRLLHEGNRKDAILLYLSGQSLESIAS 637
WK+ + + + + + + +L L +L+ GN A+L Y+ +++
Sbjct: 631 TRSHKFWKETLALLCTFAQGE--QWTTLCDALASKLMAAGNTLAAVLCYICAGNVDRTVE 688
Query: 638 IWLKEFPELENQLTSQKDTLYEAHLECLTEFVERFTVLSDYLDKGTVKLTNQTLISKFLE 697
IW L +++D ++ E L + +E+ VL+ L G K + +L F
Sbjct: 689 IW-------SRSLANERDG--RSYAELLQDLMEKTLVLA--LATGNKKF-SASLCKLFES 736
Query: 698 FVNVTAANGDFELSLRFLETLPDD--NEEVKSEKQRV-LIASGKTSTTRSTERTANSTLQ 754
+ + A+ G ++++L+ L + E+ + R+ L A +T+TT S ST+
Sbjct: 737 YAEILASQGLLTTAMKYLKVLDSGGLSPELSILRDRISLSAEPETNTTASGNTQPQSTMP 796
Query: 755 SRQ 757
Q
Sbjct: 797 YNQ 799
>Hs14149696 [U] KOG0307 Vesicle coat complex COPII subunit SEC31
Length = 1179
Score = 198 bits (504), Expect = 4e-50
Identities = 223/938 (23%), Positives = 391/938 (40%), Gaps = 146/938 (15%)
Query: 2 VKLAEYPRTATFSWSH-DRVPV-LATGPASGAIDADFXXXXXXXXXXXXXFDGS---KPS 56
+KL E R A +WS + P+ LATG ++ +D+ F D S K
Sbjct: 1 MKLKELERPAVQAWSPASQYPLYLATGTSAQQLDSSFSTNGTLEIFEVDFRDPSLDLKHR 60
Query: 57 GSVVADGKFNDLDWSG-------DDKIIAGALENGVVEFFDPKALKS------VAKIHKH 103
G + A +F+ L W +I G +NG++ ++ + S +A+ KH
Sbjct: 61 GVLSALSRFHKLVWGSFGSGLLESSGVIVGGGDNGMLILYNVTHILSSGKEPVIAQKQKH 120
Query: 104 QGPVKTLKFNAKQNNVLVSGGTQGEIFVWDSNKIGSSDYSPFSAGI-SNTPIDEVSSLSW 162
G V+ L N Q N+L SG + EIF+WD N + P + G S P +++ +LSW
Sbjct: 121 TGAVRALDLNPFQGNLLASGASDSEIFIWDLNNLNV----PMTLGSKSQQPPEDIKALSW 176
Query: 163 NQSLAHVFASASSSGYASVWDLKAKKQVLHLNHSSSTTGIKVPLTVVDWHPXXXXXXXXX 222
N+ H+ +SA SG A VWDL+ + ++ ++ S+ ++ + + WHP
Sbjct: 177 NRQAQHILSSAHPSGKAVVWDLRKNEPIIKVSDHSN----RMHCSGLAWHPDIATQLVLC 232
Query: 223 XXXDTEPLVLTWDLRNAHVPLKVLSQGHSKGVLSLDWCKQDENLLLSSGRDNTSVLWNPQ 282
D P++ WDLR A PLKVL + HS+G+LS+ W + D LLL+S +D+ + N
Sbjct: 233 SEDDRLPVIQLWDLRFASSPLKVL-ESHSRGILSVSWSQADAELLLTSAKDSQILCRNLG 291
Query: 283 EGSILTQFAPRGNWVFKSKFAPEAPDLFASASFDSKIVVQTLQNLSNTLD--AQANESKQ 340
++ + + +W F ++ P P +F++ASF+ I + ++ S + QA++
Sbjct: 292 SSEVVYKLPTQSSWCFDVQWCPRDPSVFSAASFNGWISLYSVMGRSWEVQHMRQADKISS 351
Query: 341 HASEDEFWNNV-TSNSVDDKPNTVKIQAPKWYGNKSPAAQWAFGGKLVRISDDGKGVSVV 399
S+ + + V P ++ P + + +AFGGKLV +V
Sbjct: 352 SFSKGQPLPPLQVPEQVAQAPLIPPLKKPPKWIRRPTGVSFAFGGKLVTFGLPSTPAHLV 411
Query: 400 -KPC-----ISGLEKNQLF-------DESLKSKDFVKLINKRLSQKINATNEDDWNLLE- 445
+PC IS + F E+L S + + + Q + + + W L+
Sbjct: 412 PQPCPRLVFISQVTTESEFLMRSAELQEALGSGNLLNYCQNKSQQALLQSEKMLWQFLKV 471
Query: 446 NLSMDGTALYLKDALSLDDAKEDIIKK--------------SEEDGAD--------FFNQ 483
L D +LK L +K+++ KK + G D F +Q
Sbjct: 472 TLEQDSRMKFLK---LLGYSKDELQKKVATWLKSDVGLGESPQPKGNDLNSDRQQAFCSQ 528
Query: 484 LNDKFVPEGAFKLDFSESMKP-----------------LTNFLIKGDLKSALNQALEKDL 526
+ E + F + + P L+ L+ G+L A+ L+++
Sbjct: 529 ASKHTTKEASASSAFFDELVPQNMTPWEIPITKDIDGLLSQALLLGELGPAVELCLKEER 588
Query: 527 LLEALVIAITSNDALLADKAKNAYFSKHSEQSGLARTLFSVAQRDVEDIVTNIDVSQWKD 586
+A+++A LL + + Y +K +++ ++ L V Q++ +D+V + W++
Sbjct: 589 FADAIILAQAGGTDLL-KQTQERYLAK--KKTKISSLLACVVQKNWKDVVCTCSLKNWRE 645
Query: 587 AVQFIFNYTKEDISKKNSLLVKLGDRLLHEGNR---KDAILLYLSGQSLESIASIWLKEF 643
A+ + Y+ + K L LG R+ EG+R +A L Y+ S+E + W K
Sbjct: 646 ALALLLTYSGTE--KFPELCDMLGTRMEQEGSRALTSEARLCYVCSGSVERLVECWAKCH 703
Query: 644 PELENQLTSQKDTLYEAHLECLTEFVERFTVLSDYLD--KGTVKLT-NQTLISKFLEFVN 700
L L + +E+ VL+ L+ +G ++ + ++ N
Sbjct: 704 QALSPM--------------ALQDLMEKVMVLNRSLEQLRGPHGVSPGPATTYRVTQYAN 749
Query: 701 VTAANGDFELSLRFLETLPDD--NEEVKSEKQRVLIASGKTSTTRST------ERTANST 752
+ AA G ++ F LP D V+ + R+ A G + + +T
Sbjct: 750 LLAAQGSLATAMSF---LPRDCAQPPVQQLRDRLFHAQGSAVLGQQSPPFPFPRIVVGAT 806
Query: 753 LQSRQ------GRYGSTSVPTANGAPRLSNSGIXXXXXXXXXXXXXXSTAPNVVPRKPS- 805
L S++ G S VPT + PR+ S A + P PS
Sbjct: 807 LHSKETSSYRLGSQPSHQVPTPSPRPRV--------------FTPQSSPAMPLAPSHPSP 852
Query: 806 FVPQTTSAIPTPNPYAPAAVNQQIPLSVVGSRPSYTPP 843
+ T I P A+ Q +PLS G RP+ + P
Sbjct: 853 YQGPRTQNISDYRAPGPQAI-QPLPLS-PGVRPASSQP 888
>At1g18830 [U] KOG0307 Vesicle coat complex COPII subunit SEC31
Length = 911
Score = 145 bits (367), Expect = 3e-34
Identities = 92/317 (29%), Positives = 145/317 (45%), Gaps = 33/317 (10%)
Query: 21 PVLATGPASGAIDADFXXXXXXXXXXXXXFDGS---KPSGSVVADGKFNDLDW----SGD 73
P +A G +GA+D F K G + +FN L W SG
Sbjct: 20 PFIAAGTMAGAVDLSFSSSANLEIFELDFQSNDRELKLVGQCQSSERFNRLAWGSYGSGS 79
Query: 74 DKIIAGALENGVVEFFDPKALKS-----VAKIHKHQGPVKTLKFNAKQNNVLVSGGTQGE 128
D +IAG L +G + ++P + +S V + KH+GPV+ L+FN K N L SG G
Sbjct: 80 DGLIAGGLVDGNIGLWNPISSESGEIAHVRDLSKHKGPVRGLEFNVKSPNQLASGADDGT 139
Query: 129 IFVWDSNKIGSSDYSPFSAGISNTPIDEVSSLSWNQSLAHVFASASSSGYASVWDLKAKK 188
+ +WD S S + G + E+SSLSWN+ HV AS S +G +WD+ +K
Sbjct: 140 VCIWDL--ANPSKPSHYLKGTGSYMQSEISSLSWNKGFQHVLASTSHNGTTVIWDVNNEK 197
Query: 189 QVLHLNHSSSTTGIKVPLTVVDWHPXXXXXXXXXXXXDTEPLVLTWDLRNAHVPLKVLSQ 248
+ L + V +V+ W P D+ P V + D
Sbjct: 198 IITDLKTT-------VRCSVLQWDPDHFNQILVASDEDSSPNVKSGDTC----------- 239
Query: 249 GHSKGVLSLDWCKQDENLLLSSGRDNTSVLWNPQEGSILTQFAPRGNWVFKSKFAPEAPD 308
++ GV++++WC D LL+ G+DN ++ WN + G I+ + NW F + P+ P
Sbjct: 240 -YTTGVIAMEWCPSDSLYLLTCGKDNRTICWNTKTGKIVAELPTGQNWNFDVHWYPKMPG 298
Query: 309 LFASASFDSKIVVQTLQ 325
+ +++S D KI + L+
Sbjct: 299 VISASSVDGKIGIYNLE 315
Score = 58.5 bits (140), Expect = 6e-08
Identities = 111/587 (18%), Positives = 206/587 (34%), Gaps = 68/587 (11%)
Query: 231 VLTWDLRNAHVP---LKVLSQGHSKGVLSLDWCKQDENLLLSSGRDNTSVLWNPQEGSIL 287
V WDL N P LK + SL W K +++L S+ + T+V+W+ I+
Sbjct: 140 VCIWDLANPSKPSHYLKGTGSYMQSEISSLSWNKGFQHVLASTSHNGTTVIWDVNNEKII 199
Query: 288 TQFAPRGNWVFKSKFAPEAPDLFASASFDSKIVVQTLQNLSNT---------LDAQANES 338
T + ++ DS V++ T D+ +
Sbjct: 200 TDLKTTVRCSVLQWDPDHFNQILVASDEDSSPNVKSGDTCYTTGVIAMEWCPSDSLYLLT 259
Query: 339 KQHASEDEFWNNVTSNSVDDKPNTVKIQAPKWYGNKSPAAQWAFGGKLVRISDDGK---- 394
+ WN T V + P + K P G + S DGK
Sbjct: 260 CGKDNRTICWNTKTGKIVAELPTGQNWNFDVHWYPKMP-------GVISASSVDGKIGIY 312
Query: 395 ---------------GVSVVKPCISGLEKNQLFDESLKSKDFVKLINKRLSQKINATNED 439
++ K ++ + K + E+ + L K+ + + ++
Sbjct: 313 NLEVALCSFVLVFLHSLATEKSLVNRISKFEAALENGEKTSLRGLCEKKTEEAESEEEKE 372
Query: 440 DWNLLE-NLSMDGTA---LYLKDALSLDDAKEDIIKKSEEDGADFFNQLNDKFVPEGAFK 495
W LL+ L DG A L SL + D N + VPE +
Sbjct: 373 TWGLLKIMLEEDGNAKTKLRSHLGFSLPSEENDQTANEPHATCSSTNVEETQKVPEPEGE 432
Query: 496 LDFSESMKP-----LTNFLIKGDLKSALNQALEKDLLLEALVIAITSNDALLADKAKNAY 550
+ ES P + LI GD K A+ Q + + +ALVIA L + ++ Y
Sbjct: 433 EE--ESSDPTFDDAIQRSLIVGDYKEAVAQCFSANKMADALVIAHVGGTELW-ESTRDKY 489
Query: 551 FSKHSEQSGLARTLFSVAQRDVEDIVTNIDVSQWKDAVQFIFNYTKEDISKKNSLLVKLG 610
+ + + ++ D+ + WK+ + I + + D + SL L
Sbjct: 490 I--RMSNAPYMKVVSAMMNNDLMTYLHTRQPKSWKETLALICTFAEGD--EWISLCDALA 545
Query: 611 DRLLHEGNRKDAILLYLSGQSLESIASIWLKEFPELENQLTSQKDTLYEAHLECLTEFVE 670
L+ G A L Y+ +++ IW ++ +K + +++ EC+ + +E
Sbjct: 546 SNLMAAGFTLAATLCYICAGNVDKTVDIW---------SMSLEKQSAGKSYAECVQDLME 596
Query: 671 RFTVLSDYLDKGTVKLTNQTLISKFLEFVNVTAANGDFELSLRFLETLP--DDNEEVKSE 728
+ VL+ K + +L F + + A+ G +++FL+ L D + E+
Sbjct: 597 KTLVLALTTCN---KRVSASLRKLFESYAEILASQGLIATAMKFLKLLESGDFSPELSIL 653
Query: 729 KQRVLIASGKTSTTRSTERTANSTLQSRQGRYGSTSVPTANGAPRLS 775
+ R+ + + + S + + T P +N P S
Sbjct: 654 RDRISLYAEPEAANTSASTNTQPKISNPYQEKSFTPAPLSNAQPSRS 700
>CE16320 [U] KOG0307 Vesicle coat complex COPII subunit SEC31
Length = 1083
Score = 115 bits (289), Expect = 3e-25
Identities = 85/291 (29%), Positives = 132/291 (45%), Gaps = 31/291 (10%)
Query: 55 PSGSVVADGKFNDLDWSG------DDKIIAGALENGVVEFFDP------KALKSVAKIHK 102
P+ S + +FN+L W+ + IIAG E+G V FFD ++L+ +
Sbjct: 60 PNVSHATNYRFNELAWTSLCSDAHPNGIIAGGTEDGTVVFFDADKFIKNQSLEVLLSRRD 119
Query: 103 HQGPVKTLKFNAKQNNVLVSGGTQGEIFVWDSNKIGSSDYSPFSAGISNTPIDEVSSLSW 162
H G V T+ + + + SGG G+I +WD + + PFS G N P D+V L W
Sbjct: 120 HHGHVLTIDVS-RDGRWMASGGGSGQILLWDCANLKT----PFSPGSPNFP-DQVKLLRW 173
Query: 163 NQSLAHVFASASSSGYASVWDLKAKKQVLHLNHSSSTTGIKVP---LTVVDWHPXXXXXX 219
N VFAS SS S WDL+ N S ++P + + W+P
Sbjct: 174 NLKNESVFASISSRR-VSFWDLRR-------NGSPVLEFAEIPGCDWSSLSWNPSDASQL 225
Query: 220 XXXXXXDTEPLVLTWDLRNAHVPLKVLSQGHSKGVLSLDWCKQDENLLLSSGRDNTSVLW 279
++ WD R P+K H+ G+ S+DW K D+ L++SSG D V+W
Sbjct: 226 IVSSQSQHASVIQKWDSRFTSTPVKEYRH-HNMGITSVDWNKADDRLVISSGCDGQVVIW 284
Query: 280 NPQEGSILTQFAP-RGNWVFKSKFAPEAPDLFASASFDSKIVVQTLQNLSN 329
N + +L +G+W+ K+ E P FA F + + +L +L +
Sbjct: 285 NHETSEVLGGVGSLQGDWIRNVKWNEEEPSQFAIQYFQHPVQISSLTSLGS 335
>ECU08g0210 [U] KOG0307 Vesicle coat complex COPII subunit SEC31
Length = 959
Score = 62.8 bits (151), Expect = 3e-09
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 18 DRVPVLATGPASGAIDADFXXXXXXXXXXXXXFDGSKPSGSVVADGKFNDLDWS--GDDK 75
D P++A G S D F P + D KF L W GD +
Sbjct: 19 DEKPLMAMGTKSKLFDTSFSLTSELFLYDYSTGVQYPP---LQTDNKFYKLRWCEWGDRE 75
Query: 76 IIAGALENGVVEFFDPKALKSVA-----KIHKHQGPVKTLKFNAKQNNVLVSGGTQGEIF 130
++A E+G V + P K+++ + +G V L FN + VL +G + G+I
Sbjct: 76 LLATGNEDGKVTLYTPAPEKNISFELLSTCNVLEGDVLGLDFNPSKG-VLAAGSSNGKII 134
Query: 131 VWDSNKIGSSDYSPFSAGISNTPIDEVSSLSWNQSLAHVFASASSSGYASVWDLKAKKQV 190
W+ NK+ S +++ I T ++ LSWN+ ++ + + + G + D++AK
Sbjct: 135 FWNLNKLDSQ----YTSDIPLT--SNITCLSWNRKVSRILCAGTDDGKILILDIRAKNVA 188
Query: 191 LHLNHSSSTTGIKVPLTVVDWHP 213
+ L T ++ V WHP
Sbjct: 189 MTLGGGDITM-----VSDVMWHP 206
>7301821 [S] KOG0269 WD40 repeat-containing protein
Length = 776
Score = 60.8 bits (146), Expect = 1e-08
Identities = 69/327 (21%), Positives = 122/327 (37%), Gaps = 62/327 (18%)
Query: 66 NDLDWSG-DDKIIAGALENGVVEFFDPKAL---KSVAKIHKHQGPVKTLKFNAKQNNVLV 121
ND+ WS D ++A A NGVV +D K + ++H+ T+ F++ + N+L+
Sbjct: 69 NDVAWSTLDSNLLATAATNGVVSVWDLSKFGRQKQLLVYNEHERTAHTVTFHSSEPNILI 128
Query: 122 SGGTQGEIFVWD-------------SNKIGSSDYSP-----FSAGISNTPIDEVSSLSWN 163
SG G I +D S + +SP FSA N + W+
Sbjct: 129 SGSQDGTIKCFDIRSDKSINTYFCNSESVRDVKFSPHTQNIFSAVSENGTVQLWDMRKWD 188
Query: 164 ----QSLAHV--------------FASASSSGYASVWDLKAKKQVLHLNHSSSTTGIKVP 205
Q AH A+ S VW++ + + H H+ + G
Sbjct: 189 KCMVQFTAHYGPVYTCDWHPTRNWLATGSRDKQIKVWNMDGRPGLEHTIHTIAVVG---- 244
Query: 206 LTVVDWHPXXXXXXXXXXXXDTEPLVLTWDLRNAHVPLKVLSQGHSKGVLSLDWCKQDEN 265
V W P + V WD+R ++P ++ H+ + W D +
Sbjct: 245 --RVKWRPERTYHIASCALV-VDYSVHVWDIRRPYIPFASFNE-HTNVTTGIAWQGSDSH 300
Query: 266 LLLSSGRDNT-----------SVLWNPQEGSILTQFAPRGNWVFKSKFAPEAPDLFASAS 314
LLS +D+T L +G+ L +F G+ F +K P +++
Sbjct: 301 CLLSISKDSTIYKHAFKDATRPALKANAQGASLGRF---GDISFANKIKEYEPKTSGASN 357
Query: 315 FDSKIVVQTLQNLSNTLDAQANESKQH 341
S ++ N++ ++ + SK +
Sbjct: 358 TKSSSFIRRKTNVAGSIQFHLDHSKMY 384
>ECU07g0750 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 384
Score = 58.2 bits (139), Expect = 8e-08
Identities = 52/221 (23%), Positives = 82/221 (36%), Gaps = 34/221 (15%)
Query: 77 IAGALENGVVEFFD----PKALKSVAKIHKHQGPVKTLKFNAKQNNVLVSGGTQGEIFVW 132
+AG E G V FD ++ + +H+ V F+ +L S G G + +W
Sbjct: 174 LAGCGEGGEVCVFDVSQESSSISPTVVLRRHETAVNDCAFSFFDKKLLSSAGDGGMVVLW 233
Query: 133 DSNKIGSSDYSPFSAGISNTPIDEVSSLSWNQSLAHVFASASSSGYASVWDLKAKKQVLH 192
D+ I ++ S+ ++ +V A++S G VWD ++ Q LH
Sbjct: 234 DTRS------EDCIHAIEEAHTSDILSVRFSPLDGNVIATSSCDGSVKVWDRRSLSQPLH 287
Query: 193 --LNHSSSTTGIKVPLTVVDWHPXXXXXXXXXXXXDTEPLVLTWDL--RNAHVP------ 242
L HS V+W P T+ V+ WDL A VP
Sbjct: 288 ILLGHSKDVVS-------VEWSP---HNDKVLASGSTDRRVIVWDLGQAGAEVPEEYKAE 337
Query: 243 ----LKVLSQGHSKGVLSLDWCKQDENLLLSSGRDNTSVLW 279
+K L GH+ V + W + + S DN +W
Sbjct: 338 GPPEMKFLHGGHTSTVCDISWNPAEPFEIASVSEDNILQIW 378
>At1g20540 [S] KOG1007 WD repeat protein TSSC1 WD repeat superfamily
Length = 379
Score = 57.8 bits (138), Expect = 1e-07
Identities = 61/256 (23%), Positives = 119/256 (45%), Gaps = 44/256 (17%)
Query: 94 LKSVAKIHKHQGPVK-TLKFNAKQNNVLVSGGTQGEIFVW--DSNKIGSSDYSPFSAGIS 150
L+ VA + H G + L + + + + L+S Q IF+W D +K + S SAG+
Sbjct: 138 LERVASLDAHVGKINCVLWWPSGRCDKLISIDEQN-IFLWSLDCSKKSAEVLSKDSAGM- 195
Query: 151 NTPIDEVSSLSWNQSLAHVFASASSSGYASV--WDLKAKKQVLHLNHSSSTTGIKVPLTV 208
+ +S +W+ H + +++G +SV WDL+ K+V + H+ +
Sbjct: 196 ---LHSLSGGAWDP---HDVNAVAATGESSVQFWDLRTMKKVNSIEHAH--------VRG 241
Query: 209 VDWHPXXXXXXXXXXXXDTEPLVLTWDLRNAHVPLKVLSQGHSKGVLSLDWCKQDENLLL 268
VD++P + E + WDLR A VP++ L GH+ ++ + + L+L
Sbjct: 242 VDYNPKREHILVTA---EDESGIHVWDLRKAKVPVQELP-GHTHWTWAVRCNPEYDGLIL 297
Query: 269 SSGRDNTSVLW-------------NPQEGS------ILTQFAPRGNWVFKSKFAPEAPDL 309
S+G D+ LW +P E + +L + + V+ ++ P +
Sbjct: 298 SAGTDSVVNLWYASATSSDDKTSESPVESTRQRVNPLLNSYTDYEDSVYGLAWSSREPWV 357
Query: 310 FASASFDSKIVVQTLQ 325
FAS S+D ++++++++
Sbjct: 358 FASLSYDGRVIIESVK 373
>At5g23430 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 922
Score = 57.0 bits (136), Expect = 2e-07
Identities = 59/222 (26%), Positives = 90/222 (39%), Gaps = 32/222 (14%)
Query: 103 HQGPVKTLKFNAKQNNVLVSGGTQGEIFVWDSNKIGS--SDYSPFSAGISNTPIDEVSSL 160
H V LK K + VLV+GG ++ +W K + S Y S+GI + D L
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYG-HSSGIDSVTFDASEVL 73
Query: 161 SWNQSLAHVFASASSSGYASVWDLKAKKQVLHLNHSSSTTGIKVPLTVVDWHPXXXXXXX 220
A+ ++SG +WDL+ K V L TG + VD+HP
Sbjct: 74 ---------VAAGAASGTIKLWDLEEAKIVRTL------TGHRSNCISVDFHPFGEFFAS 118
Query: 221 XXXXXDTEPLVLTWDLRN---AHVPLKVLSQGHSKGVLSLDWCKQDENLLLSSGRDNTSV 277
+ + WD+R H +GH++GV L + D ++S G DN
Sbjct: 119 GSLDTNLK----IWDIRKKGCIHT-----YKGHTRGVNVLRF-TPDGRWVVSGGEDNIVK 168
Query: 278 LWNPQEGSILTQFAPRGNWVFKSKFAPEAPDLFASASFDSKI 319
+W+ G +LT+F + F P L A+ S D +
Sbjct: 169 VWDLTAGKLLTEFKSHEGQIQSLDFHPH-EFLLATGSADRTV 209
>YBR195c [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 422
Score = 56.2 bits (134), Expect = 3e-07
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 13/153 (8%)
Query: 55 PSGSVVADGK-FNDLDWSGD-DKIIAGALENGVVEFFDPKALKSVAKIH--KHQGPVKTL 110
P S+ +DG ND+ W D + A E V D + K + + KH G V +
Sbjct: 243 PLVSINSDGTAVNDVTWMPTHDSLFAACTEGNAVSLLDLRTKKEKLQSNREKHDGGVNSC 302
Query: 111 KFNAKQNNVLVSGGTQGEIFVWDSNKIGSSDYSPFSAGISNTPIDEVSSLSWNQSLAHVF 170
+FN K + +L S + G + +WD + S + G S VS+L W+ + V
Sbjct: 303 RFNYKNSLILASADSNGRLNLWDIRNMNKSPIATMEHGTS------VSTLEWSPNFDTVL 356
Query: 171 ASA-SSSGYASVWDLKAKKQVLHLNHSSSTTGI 202
A+A G +WD ++ + H G+
Sbjct: 357 ATAGQEDGLVKLWDTSCEETI--FTHGGHMLGV 387
>SPAP17D4.01 [U] KOG0277 Peroxisomal targeting signal type 2 receptor
Length = 297
Score = 55.8 bits (133), Expect = 4e-07
Identities = 45/206 (21%), Positives = 85/206 (40%), Gaps = 18/206 (8%)
Query: 83 NGVVEFFD-PKALKSVAKIHKHQGPVKTLKFNAKQNNVLVSGGTQGEIFVWDSNKIGSSD 141
+G + FD K + K +H+ + + N ++V+G G I +W N S
Sbjct: 70 DGSLRLFDLTMPSKPIHKWKEHKAEIVAIDTNTVDRRIVVTGSWDGTIKLWLGNLPNSVQ 129
Query: 142 YSPFSAGISNTPIDEVSSLSWNQSLAHVFASASSSGYASVWDLKAKKQVLHLNHSSSTTG 201
++N + +++ + S ++ SS G WD ++ + + +
Sbjct: 130 T------LNNGSNSRILTVATHYSSPNLLGYTSSDGLCKFWDFRSSDKFMSIE------- 176
Query: 202 IKVPLTVVDWHPXXXXXXXXXXXXDTEPLVLTWDLRNAHVPLKVLSQGHSKGVLSLDWCK 261
I +T ++W D LV +D+ N PL VLS GH V S+
Sbjct: 177 IPNQITCMNW---SKSNHRMVYTADNNNLVYCYDIANLKTPLSVLS-GHQLAVRSIKSSN 232
Query: 262 QDENLLLSSGRDNTSVLWNPQEGSIL 287
+LL ++ D TS +++P++ S +
Sbjct: 233 SAHDLLATASYDMTSRIFDPEQHSCI 258
>At5g08390 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 823
Score = 55.1 bits (131), Expect = 7e-07
Identities = 58/231 (25%), Positives = 92/231 (39%), Gaps = 32/231 (13%)
Query: 94 LKSVAKIHKHQGPVKTLKFNAKQNNVLVSGGTQGEIFVWDSNKIGS--SDYSPFSAGISN 151
+ S + H V LK K + VLV+GG ++ +W K + S Y S+GI +
Sbjct: 99 ISSFREFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYG-HSSGIDS 157
Query: 152 TPIDEVSSLSWNQSLAHVFASASSSGYASVWDLKAKKQVLHLNHSSSTTGIKVPLTVVDW 211
D L A+ ++SG +WDL+ K V L TG + V++
Sbjct: 158 VTFDASEGL---------VAAGAASGTIKLWDLEEAKVVRTL------TGHRSNCVSVNF 202
Query: 212 HPXXXXXXXXXXXXDTEPLVLTWDLRN---AHVPLKVLSQGHSKGVLSLDWCKQDENLLL 268
HP + + WD+R H +GH++GV L + D ++
Sbjct: 203 HPFGEFFASGSLDTNLK----IWDIRKKGCIHT-----YKGHTRGVNVLRF-TPDGRWIV 252
Query: 269 SSGRDNTSVLWNPQEGSILTQFAPRGNWVFKSKFAPEAPDLFASASFDSKI 319
S G DN +W+ G +L +F + F P L A+ S D +
Sbjct: 253 SGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPH-EFLLATGSADKTV 302
>YMR131c [R] KOG0302 Ribosome Assembly protein
Length = 511
Score = 54.3 bits (129), Expect = 1e-06
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 21/200 (10%)
Query: 91 PKALKSVAKIHKHQGPVKTLKFNAK---QNNVLVSGGTQGEI-FVWDSNKIGSSDYSPFS 146
PK+ K K+ G V+ + + L+SG G+I F +D PF+
Sbjct: 258 PKSAKRPIHTVKNHGNVEGYGLDWSPLIKTGALLSGDCSGQIYFTQRHTSRWVTDKQPFT 317
Query: 147 AGISNTPIDEVSSLSWNQSLAHVFASASSSGYASVWDLKAKKQVLHLNHSSSTTGIKVPL 206
+SN + + W+++ + VFA+A GY +WD ++KK ++ +S T +
Sbjct: 318 --VSNNK--SIEDIQWSRTESTVFATAGCDGYIRIWDTRSKKHKPAISVKASNTDV---- 369
Query: 207 TVVDWHPXXXXXXXXXXXXDTEPLVLTWDLR-----NAHVPLKVLSQGHSKG-VLSLDWC 260
V+ W T + WDLR NA V KG + S+ +
Sbjct: 370 NVISWSDKIGYLLASGDDNGTWGV---WDLRQFTPSNADAVQPVAQYDFHKGAITSIAFN 426
Query: 261 KQDENLLLSSGRDNTSVLWN 280
DE+++ DNT LW+
Sbjct: 427 PLDESIVAVGSEDNTVTLWD 446
>SPAC29A4.18 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 431
Score = 54.3 bits (129), Expect = 1e-06
Identities = 43/187 (22%), Positives = 77/187 (40%), Gaps = 6/187 (3%)
Query: 94 LKSVAKIHKHQGPVKTLKFNAKQNNVLVSGGTQGEIFVWDSNKIGSSDYSPFSAGISNTP 153
LK ++ KH P ++ +N LVSG + WD N SD + ++
Sbjct: 174 LKPKYRLTKHTQPCTSVCWNFLSKGTLVSGSQDATLSCWDLNAYNESDSASVLKVHISSH 233
Query: 154 IDEVSSLSWNQSLAHVFASASSSGYASVWDLKAKKQVLHLNHSSSTTGIKVPLTVVDWHP 213
+VS + ++ + AS S Y V D+ ++ + S P+ V ++P
Sbjct: 234 EKQVSDVRFHYKHQDLLASVSYDQYLHVHDI--RRPDASTKPARSVHAHSGPIHSVAFNP 291
Query: 214 XXXXXXXXXXXXDTEPLVLTWDLRNAHVPLKVLSQGHSKGVLSLDWCKQDENLLLSSGRD 273
T+ + WDLRN + L L +GH V + + +E +L S+ D
Sbjct: 292 ---HNDFILATCSTDKTIALWDLRNLNQRLHTL-EGHEDIVTKISFSPHEEPILASTSAD 347
Query: 274 NTSVLWN 280
+++W+
Sbjct: 348 RRTLVWD 354
>Hs13899346 [R] KOG0302 Ribosome Assembly protein
Length = 446
Score = 54.3 bits (129), Expect = 1e-06
Identities = 65/300 (21%), Positives = 110/300 (36%), Gaps = 55/300 (18%)
Query: 68 LDWSGDDKIIAGALENGVVEFF----------DPKAL-----------KSVAKIHKHQGP 106
+ W G++ + E G VE F +P+AL K + H G
Sbjct: 157 VSWLGEEPVAGVWSEKGQVEVFALRRLLQVVEEPQALAAFLRDEQAQMKPIFSFAGHMGE 216
Query: 107 VKTLKFNAKQNNVLVSGGTQGEIFVWDSNKIGS--SDYSPFSAGISNTPIDEVSSLSWNQ 164
L ++ + L++G Q I +W GS D PF + +T V L W+
Sbjct: 217 GFALDWSPRVTGRLLTGDCQKNIHLWTPTDGGSWHVDQRPF---VGHTR--SVEDLQWSP 271
Query: 165 SLAHVFASASSSGYASVWDLKAKKQVLHLNHSSSTTGIKVPLTVVDWHPXXXXXXXXXXX 224
+ VFAS S+ +WD++A + ++ T + V+ W
Sbjct: 272 TENTVFASCSADASIRIWDIRAAPSKACM--LTTATAHDGDVNVISW----SRREPFLLS 325
Query: 225 XDTEPLVLTWDLR--NAHVPLKVLSQGHSKGVLSLDWCKQDENLLLSSGRDNTSVLW--- 279
+ + WDLR + P+ Q H V S++W QD + +SG D+ W
Sbjct: 326 GGDDGALKIWDLRQFKSGSPVATFKQ-HVAPVTSVEWHPQDSGVFAASGADHQITQWDLA 384
Query: 280 ---NPQEGSILTQ-----------FAPRGNWVFKS-KFAPEAPDLFASASFDSKIVVQTL 324
+P+ G + F +G K + P+ P L S + + +T+
Sbjct: 385 VERDPEAGDVEADPGLADLPQQLLFVHQGETELKELHWHPQCPGLLVSTALSGFTIFRTI 444
>Hs5031817 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 655
Score = 53.9 bits (128), Expect = 2e-06
Identities = 57/233 (24%), Positives = 89/233 (37%), Gaps = 32/233 (13%)
Query: 92 KALKSVAKIHKHQGPVKTLKFNAKQNNVLVSGGTQGEIFVWDSNKIG-----SSDYSPFS 146
K + +I H V +L +L +GG + +W NK + SP
Sbjct: 8 KTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVE 67
Query: 147 AGISNTPIDEVSSLSWNQSLAHVFASASSSGYASVWDLKAKKQVLHLNHSSSTTGIKVPL 206
+ NTP + + S SG VWDL+A K + L G+K +
Sbjct: 68 SVRLNTP-------------EELIVAGSQSGSIRVWDLEAAKILRTL------MGLKANI 108
Query: 207 TVVDWHPXXXXXXXXXXXXDTEPLVLTWDLRNAHVPLKVLSQGHSKGVLSLDWCKQDENL 266
+D+HP + + WD+R + +GHS+ V L + D
Sbjct: 109 CSLDFHPYGEFVASGSQDTN----IKLWDIRRKGCVFRY--RGHSQAVRCLRF-SPDGKW 161
Query: 267 LLSSGRDNTSVLWNPQEGSILTQFAPRGNWVFKSKFAPEAPDLFASASFDSKI 319
L S+ D+T LW+ G ++++F V +F P L AS S D I
Sbjct: 162 LASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN-EYLLASGSSDGTI 213
>At1g76260 [S] KOG1007 WD repeat protein TSSC1 WD repeat superfamily
Length = 350
Score = 53.9 bits (128), Expect = 2e-06
Identities = 62/253 (24%), Positives = 111/253 (43%), Gaps = 39/253 (15%)
Query: 94 LKSVAKIHKHQGPVKTLKFNAKQNN-VLVSGGTQGEIFVW--DSNKIGSSDYSPFSAGIS 150
L+ VA + H G + + + N+ L+S Q +F W DS+K + S SAG+
Sbjct: 110 LECVASLDAHVGKINCVLWCPSGNSDKLISMDEQNLVF-WSLDSSKKSAEVLSKESAGMR 168
Query: 151 NTPIDEVSSLSWNQSLAHVFASASSSGYASVWDLKAKKQVLHLNHSSSTTGIKVPLTVVD 210
++ +S +WN + A+ S S WDL+ K+ N+S ++ VD
Sbjct: 169 HS----LSGGAWNPHDVNSVAATSESSI-QFWDLRTMKK----NNSIERAHVRN----VD 215
Query: 211 WHPXXXXXXXXXXXXDTEPLVLTWDLRNAHVPLKVLSQGHSKGVLSLDWCKQDENLLLSS 270
++ D E + WDLR P++ L GH+ ++ + E L+LS
Sbjct: 216 YN---LKREHILVSADDESGIHLWDLRKTKFPVQELP-GHTHWTWAVRCNPEYEELILSV 271
Query: 271 GRDNTSVLW------------NPQEGS------ILTQFAPRGNWVFKSKFAPEAPDLFAS 312
G D+ LW +P E S +L + + V+ ++ P +FAS
Sbjct: 272 GTDSAVNLWFASASSEHKTSESPVEASRQRVNPLLNSYTDYEDSVYGLAWSSREPWIFAS 331
Query: 313 ASFDSKIVVQTLQ 325
S+D ++V+++++
Sbjct: 332 LSYDGRVVIESVK 344
>Hs4505731 [U] KOG0277 Peroxisomal targeting signal type 2 receptor
Length = 323
Score = 53.5 bits (127), Expect = 2e-06
Identities = 30/87 (34%), Positives = 47/87 (53%), Gaps = 2/87 (2%)
Query: 234 WDLRNAHVPLKVLSQGHSKGVLSLDWCK-QDENLLLSSGRDNTSVLWNPQEGSILTQFAP 292
WD A PL+V + H++ V S+DW + + E L++S D T LW+P G L F
Sbjct: 95 WDTAKAAGPLQVYKE-HAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFRG 153
Query: 293 RGNWVFKSKFAPEAPDLFASASFDSKI 319
+ ++ + ++P P FASAS D +
Sbjct: 154 HESIIYSTIWSPHIPGCFASASGDQTL 180
>At5g67320 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 613
Score = 53.5 bits (127), Expect = 2e-06
Identities = 55/280 (19%), Positives = 110/280 (38%), Gaps = 39/280 (13%)
Query: 61 ADGKFND-------LDWSGDDKIIAGALENGVVEFFDPKALKSVAKIHKHQGPVKTLKFN 113
A GK N+ LDW+G+ ++A +G + + ++ + KH+GP+ +LK+N
Sbjct: 316 AKGKSNEKSKDVTTLDWNGEGTLLATGSCDGQARIWTLNG-ELISTLSKHKGPIFSLKWN 374
Query: 114 AKQNNVLVSGGTQGEIFVWDSNKIGSSDYSPFSAGISNTPIDEVSSLSWNQSLAHVFASA 173
K+ + L++G VWD F +G + W +++ +S
Sbjct: 375 -KKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSG-------PTLDVDWRNNVSFATSST 426
Query: 174 SSSGYASVWDLKAKKQVLHLNHSSSTTGIKVPLTVVDWHPXXXXXXXXXXXXDTEPLVLT 233
S Y ++ + + TG + + V W P +
Sbjct: 427 DSMIYLC--------KIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAK----I 474
Query: 234 WDLRNAHVPLKVLSQGHSKGVLSLDWC--------KQDENLLLSSGRDNTSVLWNPQEGS 285
W+++ + + + H+K + ++ W + L S+ D+T LW+ + G
Sbjct: 475 WNIKQSTFVHDL--REHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGK 532
Query: 286 ILTQFAPRGNWVFKSKFAPEAPDLFASASFDSKIVVQTLQ 325
+L F V+ F+P + AS S D I + +++
Sbjct: 533 MLCSFNGHREPVYSLAFSPNG-EYIASGSLDKSIHIWSIK 571
>Hs19913371 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 514
Score = 53.1 bits (126), Expect = 3e-06
Identities = 56/267 (20%), Positives = 105/267 (38%), Gaps = 34/267 (12%)
Query: 68 LDWSGDDKIIAGALENGVVEFFDPKALKSVAKIHKHQGPVKTLKFNAKQNNVLVSGGTQG 127
LDW+ + ++A +G + K + + +H+GP+ LK+N K+ N ++S G
Sbjct: 231 LDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWN-KKGNFILSAGVDK 288
Query: 128 EIFVWDSNKIGSSDYSPFSAGISNTPIDEVSSLSWNQSLAHVFASASSSGYASVWDLKAK 187
+WD++ + PF + + W + + FAS S+ V L
Sbjct: 289 TTIIWDAHTGEAKQQFPFHSA-------PALDVDWQSN--NTFASCSTDMCIHVCKLGQD 339
Query: 188 KQV-LHLNHSSSTTGIKVPLTVVDWHPXXXXXXXXXXXXDTEPLVLTWDLRNAHVPLKVL 246
+ + H++ IK W P + + W ++ + +
Sbjct: 340 RPIKTFQGHTNEVNAIK-------WDP----TGNLLASCSDDMTLKIWSMKQDNCVHDL- 387
Query: 247 SQGHSKGVLSLDWC-------KQDENLLLSSGR-DNTSVLWNPQEGSILTQFAPRGNWVF 298
Q H+K + ++ W + NL+L+S D+T LW+ G + V+
Sbjct: 388 -QAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVY 446
Query: 299 KSKFAPEAPDLFASASFDSKIVVQTLQ 325
F+P+ L AS SFD + + Q
Sbjct: 447 SVAFSPDGRYL-ASGSFDKCVHIWNTQ 472
>Hs15150805 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 522
Score = 53.1 bits (126), Expect = 3e-06
Identities = 58/268 (21%), Positives = 100/268 (36%), Gaps = 34/268 (12%)
Query: 68 LDWSGDDKIIAGALENGVVEFFDPKALKSVAKIHKHQGPVKTLKFNAKQNNVLVSGGTQG 127
LDW+ D ++A +G + + + +H+GP+ LK+N K N VL S G
Sbjct: 241 LDWNSDGTLLAMGSYDGFARIWTENG-NLASTLGQHKGPIFALKWNKKGNYVL-SAGVDK 298
Query: 128 EIFVWDSNKIGSSDYSPFSAGISNTPIDEVSSLSWNQSLAHVFASASSSGYASVWDLKAK 187
+WD++ + PF + + W ++ FAS S+ V L
Sbjct: 299 TTIIWDAHTGEAKQQFPFHSA-------PALDVDWQNNM--TFASCSTDMCIHVCRLGCD 349
Query: 188 KQV-LHLNHSSSTTGIKVPLTVVDWHPXXXXXXXXXXXXDTEPLVLTWDLRNAHVPLKVL 246
V H++ IK W P + + W ++ +
Sbjct: 350 HPVKTFQGHTNEVNAIK-------WDP----SGMLLASCSDDMTLKIWSMKQDACVHDL- 397
Query: 247 SQGHSKGVLSLDWC--------KQDENLLLSSGRDNTSVLWNPQEGSILTQFAPRGNWVF 298
Q HSK + ++ W +L S+ D+T LW+ ++G V+
Sbjct: 398 -QAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVY 456
Query: 299 KSKFAPEAPDLFASASFDSKIVVQTLQN 326
F+P+ L AS SFD + + Q+
Sbjct: 457 SVAFSPDGKYL-ASGSFDKYVHIWNTQS 483
>Hs4506439 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 425
Score = 52.8 bits (125), Expect = 3e-06
Identities = 54/244 (22%), Positives = 98/244 (40%), Gaps = 15/244 (6%)
Query: 103 HQGPVKTLKFNAKQNNVLVSGGTQGEIFVWDSNKIGSSDYSPFSAGISNTPI------DE 156
H+G V ++ + +++ + ++ V+D K + P +G N + E
Sbjct: 122 HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAK---PDPSGECNPDLRLRGHQKE 178
Query: 157 VSSLSWNQSLAHVFASASSSGYASVWDLKA-KKQVLHLNHSSSTTGIKVPLTVVDWHPXX 215
LSWN +L+ SAS +WD+ A K+ ++ + TG + V WH
Sbjct: 179 GYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWH--L 236
Query: 216 XXXXXXXXXXDTEPLVLTWDLR-NAHVPLKVLSQGHSKGVLSLDWCKQDENLLLSSGRDN 274
D + L++ WD R N L H+ V L + E +L + D
Sbjct: 237 LHESLFGSVADDQKLMI-WDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADK 295
Query: 275 TSVLWNPQEGSI-LTQFAPRGNWVFKSKFAPEAPDLFASASFDSKIVVQTLQNLSNTLDA 333
T LW+ + + L F + +F+ ++P + AS+ D ++ V L + A
Sbjct: 296 TVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSA 355
Query: 334 QANE 337
+ E
Sbjct: 356 EDAE 359
>CE24682 [S] KOG1007 WD repeat protein TSSC1 WD repeat superfamily
Length = 362
Score = 52.4 bits (124), Expect = 4e-06
Identities = 64/328 (19%), Positives = 132/328 (39%), Gaps = 49/328 (14%)
Query: 88 FFDPKALKSVAKIHKHQ-GPVKTLKFNAKQNNVLVS--------GGTQGEIFVWDSNKIG 138
F DP+A + ++K +H G V+ + + ++ +L + GGT I +W+ +
Sbjct: 46 FMDPEASRLMSKTFRHPAGEVRAIAAHPTKSTILATCTADFSSLGGTHS-ITIWNIEE-- 102
Query: 139 SSDYSPFSAGISNTPIDEVSSLSWNQSLAHVFASASSSGYASVWDLKAKKQVLHL-NHSS 197
++ VS L Q ++ + +S A++ + + Q+L++ N
Sbjct: 103 -----------DKRTLETVSRLPTEQVMSCLEWEPNSMKCAAMTPFRPEIQLLNMENGPE 151
Query: 198 STTGIKVPLTVVD-------WHPXXXXXXXXXXXXDTEPLVLTWDLRNAHVPLKVLSQGH 250
+K+PL + W P T + D R + LK+ H
Sbjct: 152 IVQNLKIPLENEEDEMFSATWSPHHDGNMLGVTGGRTAWCI---DCRTDNEYLKI-RDAH 207
Query: 251 SKGVLSLDWCKQDENLLLSSGRDNTSVLWNPQE-GSILTQFAPRGNWVFKSKFAPEAPDL 309
+S+D+ ++++ + G D +W+ + S LT P +WV+ +F P L
Sbjct: 208 IHRTISMDFNPNLQHVIATCGDDGYVRIWDTRSTSSALTSLHPHAHWVWSVRFHPVHDQL 267
Query: 310 FASASFDSKIVVQTLQNLSNTLDAQANESKQHASEDEFWNNVTSNS---VDDKPNTVKIQ 366
+ D+ +V+ Q++S+ + + ++ +D+ + +D+ ++V
Sbjct: 268 LLTGGSDASVVLSCAQSVSSEQQIEFRDDEEEEEDDDLVEKLQDGQLERIDEHEDSV--Y 325
Query: 367 APKWYGNKSPAAQWAFGGKLVRISDDGK 394
A W S A W F +S DG+
Sbjct: 326 ACAW----SSADPWTFAS----LSYDGR 345
>CE21113 [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 809
Score = 52.4 bits (124), Expect = 4e-06
Identities = 57/257 (22%), Positives = 97/257 (37%), Gaps = 32/257 (12%)
Query: 70 WSGDDKIIAGALENGVVEFFDPKALKSVAKIHKHQGPVKTLKFNAKQNNVLVSGGTQGEI 129
WS + K + + G ++ A + H ++ LK+ A L+S G +
Sbjct: 141 WSPEGKRLITGCQTGEFTLWNGTAFNFETILQAHDSAIRALKW-ASNEQWLLSADQGGYV 199
Query: 130 FVWDSNKIGSSDYSPFS----AGISNTPIDEVSSLSWNQSLAHVFASASSSGYASVWDLK 185
W N + +S G++ P D FA+AS G A VWD
Sbjct: 200 KYWQPNMNNAHMFSAHKDEAIRGLAFAPTDVK------------FATASDDGTARVWDFA 247
Query: 186 --AKKQVLHLNHSSSTTGIKVPLTVVDWHPXXXXXXXXXXXXDTEPLVLTWDLRNAHVPL 243
+++VL G + +DWHP DT+ V WD ++
Sbjct: 248 RYTEERVLR--------GHGAEVRCIDWHP--TKGLIATGSRDTQQPVKIWDPKSGSCLA 297
Query: 244 KVLSQGHSKGVLSLDWCKQDENLLLSSGRDNTSVLWNPQEGSILTQFAPRGNWVFKSKFA 303
+ Q H V+++++ K + N LL+ GRD+ +++ + + + V +
Sbjct: 298 TL--QEHKSSVMAVEFNK-NGNWLLTGGRDHLVKMYDIRMMKEMRTYRAHKKEVISLAWH 354
Query: 304 PEAPDLFASASFDSKIV 320
P LF S D IV
Sbjct: 355 PIHEGLFVSGGGDGSIV 371
>CE16234 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 417
Score = 52.4 bits (124), Expect = 4e-06
Identities = 51/241 (21%), Positives = 99/241 (40%), Gaps = 13/241 (5%)
Query: 103 HQGPVKTLKFNAKQNNVLVSGGTQGEIFVWDSNKIGS----SDYSPFSAGISNTPIDEVS 158
H+G V ++ +++N++ + +++++D K + + ++P +T E
Sbjct: 119 HEGEVNRARYMPQKSNIIATKSPHADVYIFDYLKHSAVPRDNTFNPLIRLKGHT--KEGY 176
Query: 159 SLSWNQSLAHVFASASSSGYASVWDLKAKKQVL-HLNHSSSTTGIKVPLTVVDWHPXXXX 217
LSWN + + SAS WD+ A + V L G + + V WH
Sbjct: 177 GLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWH---VL 233
Query: 218 XXXXXXXXDTEPLVLTWDLRNAHVPLKVLSQGHSKGVLSLDWCKQDENLLLSSGRDNTSV 277
+ +L WD+R + P + HS V L + E +L + D T
Sbjct: 234 HDGVFGSVGDDKKLLIWDVRTS-TPGHCI-DAHSAEVNCLAFNPYSEFILATGSADKTVA 291
Query: 278 LWNPQEGSI-LTQFAPRGNWVFKSKFAPEAPDLFASASFDSKIVVQTLQNLSNTLDAQAN 336
LW+ + + L F + +F+ +++P + AS+ D ++ V L + A+
Sbjct: 292 LWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDA 351
Query: 337 E 337
E
Sbjct: 352 E 352
>At4g35050 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 424
Score = 52.0 bits (123), Expect = 6e-06
Identities = 53/261 (20%), Positives = 106/261 (40%), Gaps = 36/261 (13%)
Query: 110 LKFNAKQNNVLVSGGTQGEIFVWDSNKIGSSDY-SPFSAGISNTPIDEVSSLSWNQSLAH 168
L +++ + L+SG I +WD + + +P + I + ++W+ +
Sbjct: 175 LAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSI--IEDVAWHMKNEN 232
Query: 169 VFASASSSGYASVWDLKAKKQVLHLNHSSSTTGIKVPLTVVDWHPXXXXXXXXXXXXDTE 228
+F SA +WDL+ + + H +KV +++ ++
Sbjct: 233 IFGSAGDDCQLVIWDLRTNQ----MQHQ-----VKVHEREINYLSFNPFNEWVLATASSD 283
Query: 229 PLVLTWDLRNAHVPLKVLSQGHSKGVLSLDWCKQDENLLLSSGRDNTSVLW--------- 279
V +DLR PL VLS+ H V ++W E +L SSG D ++W
Sbjct: 284 STVALFDLRKLTAPLHVLSK-HEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQ 342
Query: 280 -----NPQEGSILTQFAPRGNWVFKSKFA--PEAPDLFASASFDSKIVVQTL-------Q 325
+ ++G F+ G+ S FA + P + +S + D+ + V +
Sbjct: 343 LEIELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMAESIYRED 402
Query: 326 NLSNTLDAQANESKQHASEDE 346
+ D + N++ QH++E++
Sbjct: 403 DEDEDDDDEGNQNAQHSNENQ 423
>SPAC29A4.08c [R] KOG0289 mRNA splicing factor
Length = 488
Score = 51.2 bits (121), Expect = 1e-05
Identities = 30/108 (27%), Positives = 49/108 (44%), Gaps = 4/108 (3%)
Query: 73 DDKIIAGALENGVVEFFDPKALKSVAKIHKHQGPVKTLKFNAKQNNVLVSGGTQGEIFVW 132
D + LENG + FF+ + + K H PVKTL+F ++V+ +IF+W
Sbjct: 344 DGNLFVAGLENGELRFFETSSGNELTKFGPHSSPVKTLQFGENGYWLVVTTNDDSDIFIW 403
Query: 133 DSNKIGSSDYSPFSAGISNTPIDEVSSL---SWNQSL-AHVFASASSS 176
D K P ++ +D S L S ++L H++ +S S
Sbjct: 404 DLRKSELVQKIPLQTKVAAVSLDITSQLLVSSDGETLYVHIYVKSSKS 451
>At2g16780 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 415
Score = 51.2 bits (121), Expect = 1e-05
Identities = 42/185 (22%), Positives = 73/185 (38%), Gaps = 39/185 (21%)
Query: 110 LKFNAKQNNVLVSGGTQGEIFVWDSNKIGSSDYSPFSAGISNTPIDEV------------ 157
L ++ + L+SG +I +WD +S TP D+V
Sbjct: 174 LSWSPFKEGYLLSGSQDQKICLWD---------------VSATPQDKVLNAMFVYEGHES 218
Query: 158 --SSLSWNQSLAHVFASASSSGYASVWDLKAKKQVLHLNHSSSTTGIKVPLTVVDWHPXX 215
+ +SW+ ++F SA G +WD + + + H +KV V++
Sbjct: 219 AIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQ----MQHQ-----VKVHEREVNYLSFN 269
Query: 216 XXXXXXXXXXDTEPLVLTWDLRNAHVPLKVLSQGHSKGVLSLDWCKQDENLLLSSGRDNT 275
++ V +DLR + PL V+S H V ++W E +L SSG D
Sbjct: 270 PFNEWVLATASSDSTVALFDLRKLNAPLHVMSS-HEGEVFQVEWDPNHETVLASSGEDRR 328
Query: 276 SVLWN 280
++W+
Sbjct: 329 LMVWD 333
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.311 0.129 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,091,105
Number of Sequences: 60738
Number of extensions: 3028845
Number of successful extensions: 12839
Number of sequences better than 1.0e-05: 33
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 12558
Number of HSP's gapped (non-prelim): 121
length of query: 1231
length of database: 30,389,216
effective HSP length: 118
effective length of query: 1113
effective length of database: 23,222,132
effective search space: 25846232916
effective search space used: 25846232916
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)