ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI1455 good I KOG2818 Lipid transport and metabolism Predicted undecaprenyl diphosphate synthase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactVI1455 513318  514316 333  
         (333 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YDL193w [I] KOG2818 Predicted undecaprenyl diphosphate synthase       367   e-101
SPBC2A9.06c [I] KOG2818 Predicted undecaprenyl diphosphate synthase   147   3e-35
Hs20270243 [I] KOG2818 Predicted undecaprenyl diphosphate synthase     94   3e-19

>YDL193w [I] KOG2818 Predicted undecaprenyl diphosphate synthase
          Length = 375

 Score =  367 bits (942), Expect = e-101
 Identities = 179/304 (58%), Positives = 235/304 (76%), Gaps = 5/304 (1%)

Query: 34  MNTDVDDVLKRKNINTNQKFSGKIEYAIYKTLLIFLYVIYAITRYFQREYNRIAIKLLDL 93
           +N + + V K+K  + +++  GK EY  YK LL+ LY+ + + RY Q +YN++ +++  +
Sbjct: 73  VNNETNGVQKQKTEDLSKRI-GKFEYLFYKFLLVLLYICFGLFRYGQYQYNKMKLRIFSI 131

Query: 94  AYNPSNSPQLIRQDVNKLQKIPKRLAAILESKPEGDIGGGLPGLINDASDVVCWTVSAGI 153
            YN + +PQLIRQDV  L+KIPKRLAAILE KP GD+GGG+ GL+NDAS++VCWTVSAGI
Sbjct: 132 IYNHAYTPQLIRQDVIPLKKIPKRLAAILEVKPVGDVGGGVTGLLNDASEIVCWTVSAGI 191

Query: 154 KHLILYDYDGKMKQNVHELRAGIHHKLAKYFGLDNVPKFAIKIPHTNQIFFDKD--EDQK 211
           KHL+LYDYDG +++NV ELR  IH  LAKYFG  +VP +A+KIPH+N+IF++ D  E + 
Sbjct: 192 KHLMLYDYDGILQRNVPELRMEIHSNLAKYFGPAHVPNYAVKIPHSNKIFYNLDGIETET 251

Query: 212 DLSP--EKSTTKHKVAVEISLLSKVDGRDTILELTKTMADLCAKGQLKVEDVDTKLVNQE 269
           D+    E +  K K+A+EISLLS  DGR+TI++LTKTMA+LCA  +L V D+   LV+ E
Sbjct: 252 DVGNEIEANQEKDKIAIEISLLSNRDGRETIVDLTKTMAELCAVNELSVSDITMDLVDSE 311

Query: 270 LTQLVGHEPDLLLFFGPALDLQGFPPWHIRLTELYWETDNDQVSYYVFIRGLKQYADCKM 329
           L QLVG EPDLLL+FGP+LDLQGFPPWHIRLTE YWE DN++V Y VFIRGL+QYA CK+
Sbjct: 312 LKQLVGPEPDLLLYFGPSLDLQGFPPWHIRLTEFYWEKDNNEVIYSVFIRGLRQYAGCKV 371

Query: 330 NVGK 333
           NVGK
Sbjct: 372 NVGK 375


>SPBC2A9.06c [I] KOG2818 Predicted undecaprenyl diphosphate synthase
          Length = 258

 Score =  147 bits (370), Expect = 3e-35
 Identities = 83/243 (34%), Positives = 133/243 (54%), Gaps = 20/243 (8%)

Query: 90  LLDLAYNPSNSPQLIRQDVNKLQKIPKRLAAILESKPEGDIGGGLPGLINDASDVVCWTV 149
           LL+  Y+   S  LIR+D  KL+K PK +A I+E   +G    G+ GLI+DA ++  W V
Sbjct: 35  LLNFLYHHHCSRDLIRRDTKKLKKKPKHIAVIIECVEDG----GIEGLIHDACELSAWCV 90

Query: 150 SAGIKHLILYDYDGKMKQNVHELRAGIHHKLAKYFGLDNVPKFAIKIPHTNQIFFDKDED 209
            + I+ L +Y+  G +KQ+   +   I+  L  Y G D   K  + + +           
Sbjct: 91  CSNIRELTIYERKGFLKQSPEAVEKAIYSHLPFYLGGD---KCTVHVTNP---------- 137

Query: 210 QKDLSPEKSTTKHKVAVEISLLSKVDGRDTILELTKTMADLCAKGQLKVEDVDTKLVNQE 269
               SP++      V +++ L++K DGRD I++LT+ +ADLC K  +    V  +L+++E
Sbjct: 138 ---CSPDEKNQNDCVDLKVHLIAKEDGRDAIIDLTRGLADLCTKKVISSTQVTLELIDKE 194

Query: 270 LTQLVGHEPDLLLFFGPALDLQGFPPWHIRLTELYWETDNDQVSYYVFIRGLKQYADCKM 329
           L + V  EPDLL+ F P L LQGFPPW +RL E++ +      +Y  F + L  Y++ +M
Sbjct: 195 LKESVIPEPDLLIIFAPLLKLQGFPPWQLRLCEIFHDPILYTTNYLTFFKALVHYSNAEM 254

Query: 330 NVG 332
            +G
Sbjct: 255 RLG 257


>Hs20270243 [I] KOG2818 Predicted undecaprenyl diphosphate synthase
          Length = 293

 Score = 94.0 bits (232), Expect = 3e-19
 Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 29/232 (12%)

Query: 105 RQDVNKLQKIPKRLAAIL---ESKPEGDIGGGLPGLINDASDVVCWTVSAGIKHLILYDY 161
           R D   L+K+P  +  ++   E +P            +D + +V W ++ GI ++ +YD+
Sbjct: 88  RADGRSLEKLPVHMGLVITEVEQEPS----------FSDIASLVVWCMAVGISYISVYDH 137

Query: 162 DGKMKQNVHELRAGIHHKLAKYFGLDNVPKFAIKIPHTNQIFFDKDEDQKDLSPEKSTTK 221
            G  K+N   L   I  +  +  GLD   K++ +  ++N    DKD+   +         
Sbjct: 138 QGIFKRNNSRLMDEILKQQQELLGLD-CSKYSPEFANSN----DKDDQVLNCH------- 185

Query: 222 HKVAVEISLLSKVDGRDTILELTKTMADLCAKGQLKVEDVDTKLVNQELTQLVGHEPDLL 281
               + + +LS  DG+  I+   +    L A+ Q +  D+D   +   L+     +PDL+
Sbjct: 186 ----LAVKVLSPEDGKADIVRAAQDFCQLVAQKQKRPTDLDVDTLASLLSSNGCPDPDLV 241

Query: 282 LFFGPALDLQGFPPWHIRLTELYWETDNDQVSYYVFIRGLKQYADCKMNVGK 333
           L FGP     GF PWHIRLTE+     +  +SY  F   L+QYA C+  +GK
Sbjct: 242 LKFGPVDSTLGFLPWHIRLTEIVSLPSHLNISYEDFFSALRQYAACEQRLGK 293


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.318    0.138    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,173,798
Number of Sequences: 60738
Number of extensions: 889025
Number of successful extensions: 2361
Number of sequences better than 1.0e-05: 3
Number of HSP's better than  0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2354
Number of HSP's gapped (non-prelim): 3
length of query: 333
length of database: 30,389,216
effective HSP length: 107
effective length of query: 226
effective length of database: 23,890,250
effective search space: 5399196500
effective search space used: 5399196500
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)