ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactVI1586   suspect: LH   R     KOG1773  General function prediction only                               Stress responsive protein

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactVI1586 564866 564456 -137 
         (137 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YDL123w [R] KOG1773 Stress responsive protein                         113   8e-26

>YDL123w [R] KOG1773 Stress responsive protein
          Length = 140

 Score =  113 bits (282), Expect = 8e-26
 Identities = 65/140 (46%), Positives = 80/140 (56%), Gaps = 9/140 (6%)

Query: 1   MCLCCICCTVSDLILYIVAIIFPPIAVGLRSGXXXXXXXXXXXXTMFGFLPGMIHAFYYI 60
           MC  C+CCTVSD ILYIVA  FPP AV LRSG            T+ GFLPGM+HAFYYI
Sbjct: 1   MCCYCVCCTVSDFILYIVAFFFPPAAVLLRSGPCSSDFLLNVLLTLLGFLPGMLHAFYYI 60

Query: 61  TVTSPLRTDTETRYYYEQGWNDGQR---YGSPSAVTTVSHQPTGVEDP--LLPRTQIPLR 115
           T+TSPLR + E  YYY+QGW D +R      P    T  ++P        + P  + PL 
Sbjct: 61  TITSPLR-NAEYVYYYQQGWVDSERNVPSNRPQNSQTPQNRPQQGSSARNVYPSVETPLL 119

Query: 116 Y--EPNNYAQDVPKGSPPPY 133
               P++  Q + + SPPPY
Sbjct: 120 QGAAPHDNKQSLVE-SPPPY 138


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.322    0.141    0.457 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,803,591
Number of Sequences: 60738
Number of extensions: 354513
Number of successful extensions: 874
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 872
Number of HSP's gapped (non-prelim): 1
length of query: 137
length of database: 30,389,216
effective HSP length: 95
effective length of query: 42
effective length of database: 24,619,106
effective search space: 1034002452
effective search space used: 1034002452
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)