ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI1686 check: MH A KOG0923 RNA processing and modification mRNA splicing factor ATP-dependent RNA helicase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI1686 602989 605619 877
(877 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YNR011c [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase 856 0.0
CE15592 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase 631 e-180
Hs20555648 [A] KOG0923 mRNA splicing factor ATP-dependent RNA he... 595 e-170
7298547 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase 595 e-169
At1g32490 [A] KOG0923 mRNA splicing factor ATP-dependent RNA hel... 591 e-168
Hs4503293 [A] KOG0923 mRNA splicing factor ATP-dependent RNA hel... 590 e-168
At2g35340 [A] KOG0923 mRNA splicing factor ATP-dependent RNA hel... 578 e-165
At4g16680 [A] KOG0923 mRNA splicing factor ATP-dependent RNA hel... 558 e-158
Hs4826690 [A] KOG0922 DEAH-box RNA helicase 529 e-150
At3g26560 [A] KOG0922 DEAH-box RNA helicase 527 e-149
SPAC10F6.02c [A] KOG0922 DEAH-box RNA helicase 526 e-149
7303231 [A] KOG0922 DEAH-box RNA helicase 520 e-147
YER013w [A] KOG0922 DEAH-box RNA helicase 499 e-141
CE01889 [A] KOG0922 DEAH-box RNA helicase 499 e-141
Hs17999539 [A] KOG0924 mRNA splicing factor ATP-dependent RNA he... 489 e-138
CE01027 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase 481 e-135
CE01334 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase 473 e-133
At3g62310 [A] KOG0925 mRNA splicing factor ATP-dependent RNA hel... 471 e-132
SPBC16H5.10c [A] KOG0925 mRNA splicing factor ATP-dependent RNA ... 465 e-130
At5g13010 [A] KOG0924 mRNA splicing factor ATP-dependent RNA hel... 464 e-130
At2g47250 [A] KOG0925 mRNA splicing factor ATP-dependent RNA hel... 463 e-130
YKR086w [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase 463 e-130
Hs4557517 [A] KOG0925 mRNA splicing factor ATP-dependent RNA hel... 462 e-129
7304234 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase 462 e-129
YGL120c [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase 456 e-128
SPBC19C2.01 [A] KOG0923 mRNA splicing factor ATP-dependent RNA h... 451 e-126
SPAC2G11.11c [A] KOG0922 DEAH-box RNA helicase 450 e-126
Hs20544129 [A] KOG0922 DEAH-box RNA helicase 446 e-125
CE27311 [A] KOG0922 DEAH-box RNA helicase 420 e-117
At1g27900 [A] KOG0922 DEAH-box RNA helicase 409 e-113
At1g26370 [A] KOG0922 DEAH-box RNA helicase 405 e-112
Hs20336302 [A] KOG0922 DEAH-box RNA helicase 400 e-111
YKL078w [A] KOG0922 DEAH-box RNA helicase 395 e-109
SPBC1711.17 [A] KOG0924 mRNA splicing factor ATP-dependent RNA h... 392 e-108
7295673 [A] KOG0922 DEAH-box RNA helicase 380 e-105
Hs21362038 [A] KOG0922 DEAH-box RNA helicase 370 e-102
ECU11g0860 [A] KOG0922 DEAH-box RNA helicase 363 e-100
ECU09g0150 [A] KOG0924 mRNA splicing factor ATP-dependent RNA he... 352 1e-96
SPAC145.03 [A] KOG0922 DEAH-box RNA helicase 349 1e-95
7297620 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase 343 7e-94
SPAPB1A10.06c [AJ] KOG0926 DEAH-box RNA helicase 299 1e-80
At2g35920 [A] KOG0920 ATP-dependent RNA helicase A 293 6e-79
At4g01020_1 [A] KOG0922 DEAH-box RNA helicase 293 6e-79
7292966 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase 293 8e-79
At5g10370_1 [A] KOG0922 DEAH-box RNA helicase 291 2e-78
7293584_2 [A] KOG0922 DEAH-box RNA helicase 282 2e-75
ECU10g0680 [A] KOG0923 mRNA splicing factor ATP-dependent RNA he... 277 6e-74
CE27603 [A] KOG0922 DEAH-box RNA helicase 276 1e-73
Hs18497286 [A] KOG0920 ATP-dependent RNA helicase A 271 3e-72
Hs22041930 [A] KOG0920 ATP-dependent RNA helicase A 266 1e-70
Hs20336294 [A] KOG0920 ATP-dependent RNA helicase A 266 1e-70
Hs20336290 [A] KOG0920 ATP-dependent RNA helicase A 266 1e-70
SPCC895.09c [A] KOG0920 ATP-dependent RNA helicase A 252 2e-66
Hs20336300 [A] KOG0925 mRNA splicing factor ATP-dependent RNA he... 249 1e-65
Hs22066120 [A] KOG0922 DEAH-box RNA helicase 247 5e-65
7302201 [K] KOG0921 Dosage compensation complex subunit MLE 233 1e-60
Hs4503297 [K] KOG0921 Dosage compensation complex subunit MLE 223 1e-57
YLR419w [A] KOG0920 ATP-dependent RNA helicase A 216 9e-56
SPBC15C4.05 [A] KOG0920 ATP-dependent RNA helicase A 214 6e-55
7293336 [A] KOG0920 ATP-dependent RNA helicase A 209 1e-53
CE18218 [K] KOG0921 Dosage compensation complex subunit MLE 208 3e-53
YMR128w [AJ] KOG0926 DEAH-box RNA helicase 202 1e-51
At4g18470_2 [A] KOG0922 DEAH-box RNA helicase 200 7e-51
ECU04g0250 [A] KOG0922 DEAH-box RNA helicase 199 2e-50
7290296 [AJ] KOG0926 DEAH-box RNA helicase 195 2e-49
7300065 [A] KOG0920 ATP-dependent RNA helicase A 195 3e-49
7292962 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase 192 2e-48
At1g33390 [AJ] KOG0926 DEAH-box RNA helicase 190 9e-48
CE29563 [AJ] KOG0926 DEAH-box RNA helicase 186 1e-46
Hs18559453 [A] KOG0920 ATP-dependent RNA helicase A 183 9e-46
Hs7661934 [A] KOG0922 DEAH-box RNA helicase 170 1e-41
7298709 [A] KOG0920 ATP-dependent RNA helicase A 170 1e-41
Hs21717812 [A] KOG0920 ATP-dependent RNA helicase A 169 1e-41
At1g48650 [A] KOG0920 ATP-dependent RNA helicase A 155 3e-37
Hs19525735 [A] KOG0925 mRNA splicing factor ATP-dependent RNA he... 154 6e-37
At1g58060 [A] KOG0920 ATP-dependent RNA helicase A 153 1e-36
7292573 [A] KOG0920 ATP-dependent RNA helicase A 153 1e-36
At2g01130 [A] KOG0920 ATP-dependent RNA helicase A 151 4e-36
At2g47680 [A] KOG0920 ATP-dependent RNA helicase A 149 2e-35
CE05718 [A] KOG0920 ATP-dependent RNA helicase A 148 4e-35
CE13245 [A] KOG0922 DEAH-box RNA helicase 147 7e-35
At2g30800 [A] KOG0920 ATP-dependent RNA helicase A 145 2e-34
At1g06670 [A] KOG0920 ATP-dependent RNA helicase A 143 1e-33
At1g58050 [A] KOG0920 ATP-dependent RNA helicase A 141 4e-33
Hs20536957 [A] KOG0920 ATP-dependent RNA helicase A 129 2e-29
At5g14900 [A] KOG0925 mRNA splicing factor ATP-dependent RNA hel... 100 1e-20
Hs22052719 [K] KOG0921 Dosage compensation complex subunit MLE 70 1e-11
Hs22061649 [K] KOG0921 Dosage compensation complex subunit MLE 57 1e-07
7291655_1 [A] KOG0920 ATP-dependent RNA helicase A 57 2e-07
Hs12383070_1 [A] KOG0920 ATP-dependent RNA helicase A 54 8e-07
HsM13375825 [A] KOG0922 DEAH-box RNA helicase 53 2e-06
>YNR011c [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 876
Score = 856 bits (2211), Expect = 0.0
Identities = 456/879 (51%), Positives = 611/879 (68%), Gaps = 38/879 (4%)
Query: 15 SGQRRAKRTYESIESVNANTNSFSPADQVLDSSPDPSLKDGKAHYSVNSIKSMVEQKVLT 74
+G+RR KRTYE + N N P+ L D KD + + + KV +
Sbjct: 8 TGKRRVKRTYE-VTRQNDNAVRIEPSS--LGEEEDKEAKDKNSALQLKRSR-YDPNKVFS 63
Query: 75 KRQRSQLHWLVKDLQILEDDIKRYGWNNLTVSEREEISLKRELLKLLNETGKDYAENGDT 134
+ +K Q+ K+ + ++ E++ K+ LL +E YA +
Sbjct: 64 NTNQGPEKNNLKGEQLGSQ--KKSSKYDEKITSNNELTTKKGLLGD-SENETKYASSNSK 120
Query: 135 SGFKMQDEVASKKQLLTAKLRNKTDRVN----WEEEQMKKSVIKAD--ADEIKVKDSDNY 188
++ ++ + K++ D++N WEE+Q++ ++ D+I ++ SD Y
Sbjct: 121 FNVEVTHKIKNAKEI---------DKINRQRMWEEQQLRNAMAGQSDHPDDITLEGSDKY 171
Query: 189 EFVFDPESMIDFTDDTTDILEPVE---DGRLAEALEEQINKMKSIKETRKSLPVYQYRQE 245
++VFD ++MID+T++ D+L + + RLA+ALE + ++ +I+E RK LPV+QY+ E
Sbjct: 172 DYVFDTDAMIDYTNEEDDLLPEEKLQYEARLAQALETEEKRILTIQEARKLLPVHQYKDE 231
Query: 246 ILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDGKC-VVCTQPRRVAATSIASRVA 304
+L I+++Q+LI++GETGSGKTTQLPQ+LVEDG+T+ GK + TQPRRVAATS+A+RVA
Sbjct: 232 LLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTDQGKLQIAITQPRRVAATSVAARVA 291
Query: 305 DEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLNDPQLSSYSAIMIDEAHER 364
DEM+V+LGKEVGY IRF+D+TTP+KT+LKY TDGMLLREFL D +LS YS IMIDEAHER
Sbjct: 292 DEMNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGMLLREFLTDSKLSKYSCIMIDEAHER 351
Query: 365 TLSTDILLGLLRGILQDRKDLRLIISSATMNATKFSKFFFDCPIFNVPGRRFPVDIHYTL 424
TL+TDIL+GLL+ IL R L+L+ISSATMNA KFS+FF +CPIFNVPGRR+PVDIHYTL
Sbjct: 352 TLATDILIGLLKDILPQRPTLKLLISSATMNAKKFSEFFDNCPIFNVPGRRYPVDIHYTL 411
Query: 425 QPEGNYINAAITTIFQIHTTQKLPGDILVFLTGQEEIESMQTKLLEILSKLDNTKFPDLL 484
QPE NYI+AAITTIFQIHTTQ LPGDILVFLTGQEEIE +TKL EI+SKL ++ ++
Sbjct: 412 QPEANYIHAAITTIFQIHTTQSLPGDILVFLTGQEEIERTKTKLEEIMSKL-GSRTKQMI 470
Query: 485 VVPIYANLPQEQQSKIFEPTPKNCRKVVLATNIAETSLTIDGIKFVVDPGFVKEQSY--S 542
+ PIYANLPQEQQ KIF+PTP+NCRKVVLATNIAETSLTIDGI++V+DPGFVKE SY S
Sbjct: 471 ITPIYANLPQEQQLKIFQPTPENCRKVVLATNIAETSLTIDGIRYVIDPGFVKENSYVPS 530
Query: 543 GGVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTKWSYYNELEKVPKPEIXXXXXXXX 602
G+++L+TVPCSRASVDQRAGRAGR+GPGKCFR+FTKWSY +ELE +PKPEI
Sbjct: 531 TGMTQLLTVPCSRASVDQRAGRAGRVGPGKCFRIFTKWSYLHELELMPKPEITRTNLSNT 590
Query: 603 XXXXXXXXXXXXXHFPMLDKPKTIQLSEALENLYAIGALNSRGAITKVGQVMCDFPCDPE 662
FP++DKP L ++LENLY +GALNS+G IT++G++MC+FPC+PE
Sbjct: 591 VLLLLSLGVTDLIKFPLMDKPSIPTLRKSLENLYILGALNSKGTITRLGKMMCEFPCEPE 650
Query: 663 YAKVIYSSVFEESCNGVLPEIVTIVSMLQESNSIFVPGLNSEEKTKLFGSLMQSSDHMLY 722
+AKV+Y++ E C GVL E +TIVSML E+ S+F+ G + + + SDH+LY
Sbjct: 651 FAKVLYTAATHEQCQGVLEECLTIVSMLHETPSLFI-GQKRDAAASVLSEV--ESDHILY 707
Query: 723 LWIYEQWEENGYSRRWCQDFKLQHKTMKRVLRIRQQLWKYCRKQDFLLKHDQNLTQLKEN 782
L I+ QW + +SR WCQD K+Q KTM RV IR QL++ K + K+DQ ++K
Sbjct: 708 LEIFNQWRNSKFSRSWCQDHKIQFKTMLRVRNIRNQLFRCSEKVGLVEKNDQ--ARMKIG 765
Query: 783 MPRSVIEAKIIKCFISGFPTNIAKLSKQGYTNIKQD---LSVSVHPSSVIF-NRMKQEGK 838
I A+I +CFISGFP NI +L GY + + L+VSVHP+S++F N ++ +
Sbjct: 766 NIAGYINARITRCFISGFPMNIVQLGPTGYQTMGRSSGGLNVSVHPTSILFVNHKEKAQR 825
Query: 839 PMKYILYQSLMLTSKEFIRDCITFDKYEWLTETMPHIYK 877
P KY+LYQ LMLTSKEFIRDC+ K EWL + +P I+K
Sbjct: 826 PSKYVLYQQLMLTSKEFIRDCLVIPKEEWLIDMVPQIFK 864
>CE15592 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 1008
Score = 631 bits (1628), Expect = e-180
Identities = 369/835 (44%), Positives = 515/835 (61%), Gaps = 62/835 (7%)
Query: 60 SVNSIKSMVEQKVLTKRQRSQLHWLVKDLQILEDDIKRYGWNNLTVSEREEISLKRELLK 119
S++ ++ ++ L KR+ +L L I+ DD + LT E+ ++ ++++L+
Sbjct: 194 SMDKLREESRRQYLKKRKVDKLEELEA---IVHDDQTLFAREKLTKREKADMEYRKKVLE 250
Query: 120 LLNETGKDYAENGDTSGFKMQD-EVASKKQLLTAKLRNKT-------DRVNWEEEQMKKS 171
GK GD K AS KQ+ + + + D WEEEQ+ S
Sbjct: 251 YTKAHGKA----GDVMKMKRYHLPDASTKQIPSQYVEDDEEDFRPGGDGAKWEEEQLMAS 306
Query: 172 VIKADADEIKVKDSDNYEFVFDPESMIDFTDDTTDILEPVE-DGRLAEALEEQINKMK-S 229
++ A + K K+ + +E + D + D ++ ++ G E +E + K K S
Sbjct: 307 MLHLGAKDAKRKEQE-FELLLD---------EKVDFIQALQMPGTNEEVVETEAEKKKMS 356
Query: 230 IKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDGKCVVCT 289
I+ETRKSLPVY +R ++++++HQ+LI+ GETGSGKTTQLPQ+L E G+ GK + CT
Sbjct: 357 IEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIGCT 416
Query: 290 QPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLNDPQ 349
QPRRVAA S+A+RVADE+ LG +VGY+IRF+D T+ +KT+LKY TDGMLLREFLN+P
Sbjct: 417 QPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTS-EKTVLKYMTDGMLLREFLNEPD 475
Query: 350 LSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNATKFSKFFFDCPIF 409
L+SYS +MIDEAHERTL TDIL GL++ I + RKDL+L+ISSAT++A KFS FF D PIF
Sbjct: 476 LASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPIF 535
Query: 410 NVPGRRFPVDIHYTLQPEGNYINAAITTIFQIHTTQKLPGDILVFLTGQEEIESMQTKLL 469
+PGRRFPVDI+YT PE +Y++AAI TI QIH TQ LPGDILVFLTGQEEIE++Q L+
Sbjct: 536 RIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQEALM 595
Query: 470 EILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKNCRKVVLATNIAETSLTIDGIKF 529
E SK +K +L+ +P+YANLP + Q+KIFEPTPK+ RKVVLATNIAETS+TIDGI +
Sbjct: 596 E-RSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAETSVTIDGINY 654
Query: 530 VVDPGFVKEQSYS--GGVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTKWSYYNELE 587
V+DPGF K+ S+ GV L V S+A+ +QRAGRAGR GPGKCFRL+T W+Y +ELE
Sbjct: 655 VIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAWAYKHELE 714
Query: 588 KVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALENLYAIGALNSRGAI 647
+ P PEI HF LD P L ALE LYA+GALN RG +
Sbjct: 715 EQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYALGALNHRGEL 774
Query: 648 TKVGQVMCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESNSIF----VPGLNS 703
TK+G+ M +FPCDP +K+I +S E C+ EIVTI +ML + ++F +++
Sbjct: 775 TKLGRRMAEFPCDPCMSKMIIASEKYE-CS---EEIVTIAAMLSCNAAVFYRPKAQVIHA 830
Query: 704 EEKTKLFGSLMQSSDHMLYLWIYEQWEENGYSRRWCQDFKLQHKTMKRVLRIRQQLWKYC 763
+ K F S + DH+ + +Y +W+E+ +S+RWC + +QH+TMKR +R QL
Sbjct: 831 DSARKGFWS--PAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLL 888
Query: 764 RKQDFLLKHDQNLTQLKENMPRSVIEAKIIKCFISGFPTNIAKLSKQG-YTNIKQDLSVS 822
+ + K S KI K +G+ N++KL G Y +K +
Sbjct: 889 ERVEIETK-------------SSTDTIKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTH 935
Query: 823 VHPSSVIFNRMKQEGKPMKYILYQSLMLTSKEFIRDCITFDKYEWLTETMPHIYK 877
HP+S +F + ++++Y L+ TSKEF+R+ + WL E PH YK
Sbjct: 936 PHPNSCLFE------ETPRWVVYFELVFTSKEFMREMSEIES-GWLLEVAPHYYK 983
>Hs20555648 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 1041
Score = 595 bits (1535), Expect = e-170
Identities = 342/832 (41%), Positives = 503/832 (60%), Gaps = 52/832 (6%)
Query: 61 VNSIKSMVEQKVLTKRQRSQLHWLVKDLQILEDDIKRYGWNNLTVSEREEISLKRELLKL 120
V ++ ++ L KR+R +L L +L D+ +G L+ ER+E+ KR + L
Sbjct: 223 VPELRKKSRREYLAKREREKLEDLEAELA---DEEFLFGDVELSRHERQELKYKRRVRDL 279
Query: 121 LNETGKDYAENGD------TSGFKMQDEVASKKQLLTAKLRNKT-----DRVNWEEEQMK 169
E Y G+ T+ + M E + + ++ ++ WEE ++
Sbjct: 280 ARE----YRAAGEQEKLEATNRYHMPKETRGQPARAVDLVEEESGAPGEEQRRWEEARLG 335
Query: 170 KSVIKADADEIKVKDSDNYEFVFDPESMIDFTDDTTDILEPVEDGRLAEALEEQINKMKS 229
+ +K A + ++ Y+ V + E I+F T L+ E+ A Q + +S
Sbjct: 336 AASLKFGARDAASQEP-KYQLVLEEEETIEFVRATQ--LQGDEEPS-APPTSTQAQQKES 391
Query: 230 IKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDGKCVVCT 289
I+ R+SLPV+ +R+E+L +I HQ+LI+ GETGSGKTTQ+PQ+L E+GYTN G + CT
Sbjct: 392 IQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACT 451
Query: 290 QPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLNDPQ 349
QPRRVAA S+A+RVA EM V LG EVGY+IRF+D T+ ++T+L+Y TDGMLLREFL++P
Sbjct: 452 QPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTS-ERTVLRYMTDGMLLREFLSEPD 510
Query: 350 LSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNATKFSKFFFDCPIF 409
L+SYS +M+DEAHERTL TDIL GL++ + + R +L+++++SATM+ +FS FF D P+F
Sbjct: 511 LASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVF 570
Query: 410 NVPGRRFPVDIHYTLQPEGNYINAAITTIFQIHTTQKLPGDILVFLTGQEEIESMQTKLL 469
+PGRRFPVDI YT PE +Y+ A + ++ QIH TQ PGDILVFLTGQEEIE+ L
Sbjct: 571 RIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQP-PGDILVFLTGQEEIEAACEMLQ 629
Query: 470 EILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKNCRKVVLATNIAETSLTIDGIKF 529
+ +L +K +LLV+PIYANLP + Q++IF+PTP RKVV+ATNIAETSLTI+GI +
Sbjct: 630 DRCRRL-GSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIY 688
Query: 530 VVDPGFVKEQSYS--GGVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTKWSYYNELE 587
V+DPGF K++SY+ G+ L PCS+AS +QRAGRAGR+ GKCFRL+T W+Y +ELE
Sbjct: 689 VLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELE 748
Query: 588 KVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALENLYAIGALNSRGAI 647
+ PEI HF LD P L ALE LYA+GALN G +
Sbjct: 749 ETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGEL 808
Query: 648 TKVGQVMCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESNSIFVPGLNS--EE 705
T G+ M + P DP +K+I +S + SC+ EI+T+ +ML +NSIF +
Sbjct: 809 TTSGRKMAELPVDPMLSKMILASE-KYSCS---EEILTVAAMLSVNNSIFYRPKDKVVHA 864
Query: 706 KTKLFGSLMQSSDHMLYLWIYEQWEENGYSRRWCQDFKLQHKTMKRVLRIRQQLWKYCRK 765
+ DH++ L +Y QW E+GYS +WC + +Q ++M+R +R+QL
Sbjct: 865 DNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQL------ 918
Query: 766 QDFLLKHDQNLTQLKENMPRSVIEAKIIKCFISGFPTNIAKLSKQGYTNIKQDLSVSVHP 825
+ L + + L+ + + R + K +G+ + A+L++ GY +KQ +V +HP
Sbjct: 919 EGLLERVEVGLSSCQGDYIR------VRKAITAGYFYHTARLTRSGYRTVKQQQTVFIHP 972
Query: 826 SSVIFNRMKQEGKPMKYILYQSLMLTSKEFIRDCITFDKYEWLTETMPHIYK 877
+S +F + +++LY L+LT+KEF+R + + WL E PH YK
Sbjct: 973 NSSLFEQQP------RWLLYHELVLTTKEFMRQVLEIES-SWLLEVAPHYYK 1017
>7298547 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 894
Score = 595 bits (1534), Expect = e-169
Identities = 348/837 (41%), Positives = 505/837 (59%), Gaps = 64/837 (7%)
Query: 61 VNSIKSMVEQKVLTKRQRSQLHWLVKDLQILEDDIKRYGWNNLTVSEREEISLKRELLKL 120
V ++ ++ L KR+ ++ L D+ DD + + LT E+EE K++LL +
Sbjct: 79 VPHLRLQSRRQYLEKRKDDKVAELEADIL---DDEYLFDESVLTKREKEEREYKKQLLNI 135
Query: 121 LNETGK-------------DYAENGDTSGFKMQDEVASKKQLLTAKLRNKTDRVNWEEEQ 167
E K + G+ S + DE + +++ WE EQ
Sbjct: 136 AKEHEKARELERIQRYNMPQDLKKGERSEYVEVDEFEKQPN---------SEQKKWEAEQ 186
Query: 168 MKKSVIKADADEIKVKDSDNYEFVFDPESMIDFTDDTTDILEPVEDGRLAEALEEQINKM 227
+ + A + K ++ YE + D + IDF T + L E+ K
Sbjct: 187 LASARFHFGAKDAKAEEE--YELLLDDQ--IDFIQALTLDGSREKSSSRQPELTEKERKR 242
Query: 228 KSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDGKCVV 287
++ ETR+SLPVY ++++++ ++++HQ+LI+ GETGSGKTTQ+PQ+LVE G+T D K +
Sbjct: 243 LTLDETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTKDKKMIG 302
Query: 288 CTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLND 347
CTQPRRVAA S+A+RVA+EM V LG EVGY+IRF+D T+ D+TILKY TDG L REFL++
Sbjct: 303 CTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTS-DRTILKYMTDGTLHREFLSE 361
Query: 348 PQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNATKFSKFFFDCP 407
P L+SYS ++IDEAHERTL TDIL GL++ I + R +L+L+ISSAT++A KFS FF D P
Sbjct: 362 PDLASYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKLLISSATLDAEKFSAFFDDAP 421
Query: 408 IFNVPGRRFPVDIHYTLQPEGNYINAAITTIFQIHTTQKLPGDILVFLTGQEEIESMQTK 467
IF +PGRR+PVDI YT PE +YI+A ++ QIH TQ L GDILVFLTGQ+EIE+ Q
Sbjct: 422 IFRIPGRRYPVDIFYTKAPEADYIDACCVSVLQIHATQPL-GDILVFLTGQDEIETCQEV 480
Query: 468 LLEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKNCRKVVLATNIAETSLTIDGI 527
L + + +L +K +L+V+P+YANLP + Q+KIFEPTP N RKV+LATNIAETSLTID I
Sbjct: 481 LHDRVKRL-GSKIRELIVIPVYANLPSDMQAKIFEPTPPNARKVILATNIAETSLTIDNI 539
Query: 528 KFVVDPGFVKEQSYSG--GVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTKWSYYNE 585
+V+DPGF K+ +++ G+ L+ VP S+AS +QRAGRAGR PGKCFRL+T W+Y +E
Sbjct: 540 IYVIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRLYTAWAYKHE 599
Query: 586 LEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALENLYAIGALNSRG 645
LE PEI HF LD P L ALE LYA+GALN G
Sbjct: 600 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 659
Query: 646 AITKVGQVMCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESNSIFVPG----L 701
+TK+G+ M +FP DP K++ +S + C+ E+VTI +ML +++IF +
Sbjct: 660 ELTKLGRRMAEFPVDPMMGKMLLASE-KYKCS---EEMVTIAAMLSVNSAIFYRPKDKII 715
Query: 702 NSEEKTKLFGSLMQSSDHMLYLWIYEQWEENGYSRRWCQDFKLQHKTMKRVLRIRQQLWK 761
+++ K F + DH+ L +Y QW E YS +WC + +Q+++MKR +R+QL
Sbjct: 716 HADTARKNFNHM--HGDHLSLLQVYNQWAETDYSTQWCYENFIQYRSMKRARDVREQLVG 773
Query: 762 YCRKQDFLLKHDQNLTQLKENMPRSVIEAKIIKCFISGFPTNIAKLSKQG-YTNIKQDLS 820
++ + + +P +V + K +G+ ++A+LSK G Y IK + +
Sbjct: 774 LMQRVEI---------DMVSCLPETV---NVRKAATAGYFYHVARLSKGGHYKTIKHNQT 821
Query: 821 VSVHPSSVIFNRMKQEGKPMKYILYQSLMLTSKEFIRDCITFDKYEWLTETMPHIYK 877
V +HP+S +F + +++LY L+ TSKE++R I + +WL E PH YK
Sbjct: 822 VMIHPNSSLFEELP------RWVLYHELVFTSKEYMRQVIEIES-KWLLEVAPHYYK 871
>At1g32490 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 1038
Score = 591 bits (1523), Expect = e-168
Identities = 353/838 (42%), Positives = 508/838 (60%), Gaps = 57/838 (6%)
Query: 63 SIKSMVEQKVLTKRQRSQLHWLVKDLQILEDDIKRYGWNNLTVSEREEISLKRELLKLLN 122
S++ + Q+ L KR++ +L L ++ ED+ +G LT +E E K+EL L+
Sbjct: 214 SLRKVSRQEYLKKREQKKLDELRDEI---EDEQYLFGGEKLTETELREFRYKKELYDLVK 270
Query: 123 ETGKD---YAENGDTSGFKMQDEVASKKQLLTAKLR----NKTDRVN-------WEEEQM 168
+ +D E + + V +K+ A R + T+++N WE+ Q+
Sbjct: 271 KRTQDEDNVEEYRIPDAYDQEGGVDQEKRFSVAVQRYRDLDSTEKMNPFAEQEAWEDHQI 330
Query: 169 KKSVIKADADEIKVKDSDNYEFVFDPESMIDFTDDTTDILEPVEDGRLAEALEEQINK-- 226
K+ +K A + SD+Y+FVF E I+F ++ E ED A+ + + +
Sbjct: 331 GKATLKFGAKNKQA--SDDYQFVF--EDQINFIKESVMAGENYEDAMDAKQKSQDLAEKT 386
Query: 227 -MKSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDGKC 285
++ ++E R+SLP+Y YR ++L ++ +HQ+L++VG+TGSGKTTQ+PQ+L E GYT GK
Sbjct: 387 ALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRGK- 445
Query: 286 VVCTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFL 345
V CTQPRRVAA S+A+RVA EM V LG EVGY+IRF+D T+ DKT+LKY TDGMLLRE L
Sbjct: 446 VGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTS-DKTVLKYMTDGMLLRELL 504
Query: 346 NDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNATKFSKFFFD 405
+P L+SYS +++DEAHERTLSTDIL GL++ I + R DL+L+ISSATM+A KFS +F
Sbjct: 505 GEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYFDT 564
Query: 406 CPIFNVPGRRFPVDIHYTLQPEGNYINAAITTIFQIHTTQKLPGDILVFLTGQEEIESMQ 465
PIF+ PGRR+PV+I+YT PE +Y++AAI TI IH + L GDILVF TGQEEIE+ +
Sbjct: 565 APIFSFPGRRYPVEINYTSAPEADYMDAAIVTILTIHVREPL-GDILVFFTGQEEIETAE 623
Query: 466 TKLLEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKNCRKVVLATNIAETSLTID 525
L + L TK +L++ PIYANLP E Q+KIFEPTP+ RKVVLATNIAETSLTID
Sbjct: 624 EILKHRIRGL-GTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTID 682
Query: 526 GIKFVVDPGFVKEQSYS--GGVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTKWSYY 583
GIK+VVDPGF K +SY+ G+ L+ P S+AS QRAGRAGR PGKC+RL+T ++Y
Sbjct: 683 GIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYN 742
Query: 584 NELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALENLYAIGALNS 643
N+LE+ PE+ +F +D P L ++LE L+A+GALN
Sbjct: 743 NDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLELLFALGALNK 802
Query: 644 RGAITKVGQVMCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESNSIFVPGLNS 703
G +TK G+ M +FP DP +K+I S + C+ EI++I +ML SIF +
Sbjct: 803 LGELTKAGRRMAEFPLDPMLSKMIVVS-DKYKCS---DEIISIAAMLSIGGSIFYRPKDK 858
Query: 704 E---EKTKLFGSLMQSSDHMLYLWIYEQWEENGYSRRWCQDFKLQHKTMKRVLRIRQQLW 760
+ + ++ DH+ L +Y W+E +S +WC + +Q ++MKR IR QL
Sbjct: 859 QVHADNARMNFHTGNVGDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDIRDQLE 918
Query: 761 KYCRKQDFLLKHDQNLTQLKENMPRSVIEAKIIKCFISGFPTNIAKLSKQG-YTNIKQDL 819
+ + + NL +L + K ++GF + AKL K G Y +K
Sbjct: 919 GLLERVE--IDISSNLNELD----------SVRKSIVAGFFPHTAKLQKNGSYRTVKHPQ 966
Query: 820 SVSVHPSSVIFNRMKQEGKPMKYILYQSLMLTSKEFIRDCITFDKYEWLTETMPHIYK 877
+V +HP+S + + ++++Y L+LTSKE++R +T K EWL E PH Y+
Sbjct: 967 TVHIHPNSGLSQVLP------RWVVYHELVLTSKEYMRQ-VTELKPEWLIELAPHYYQ 1017
>Hs4503293 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 1041
Score = 590 bits (1521), Expect = e-168
Identities = 339/832 (40%), Positives = 501/832 (59%), Gaps = 52/832 (6%)
Query: 61 VNSIKSMVEQKVLTKRQRSQLHWLVKDLQILEDDIKRYGWNNLTVSEREEISLKRELLKL 120
+ ++ ++ L KR+R +L L +L D+ +G L+ ER+E+ KR + L
Sbjct: 223 IPELRKKSRREYLAKREREKLEDLEAELA---DEEFLFGDVELSRHERQELKYKRRVRDL 279
Query: 121 LNETGKDYAENGD------TSGFKMQDEVASKKQLLTAKLRNKT-----DRVNWEEEQMK 169
E Y G+ T+ + M E + + ++ ++ WEE ++
Sbjct: 280 ARE----YRAAGEQEKLEATNRYHMPKETRGQPARAVDLVEEESGAPGEEQRRWEEARLG 335
Query: 170 KSVIKADADEIKVKDSDNYEFVFDPESMIDFTDDTTDILEPVEDGRLAEALEEQINKMKS 229
+ +K A + ++ Y+ V + E I+F T L+ E+ A Q + +S
Sbjct: 336 AASLKFGARDAASQEP-KYQLVLEEEETIEFVRATQ--LQGDEEPS-APPTSTQAQQKES 391
Query: 230 IKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDGKCVVCT 289
I+ R+SLPV+ +R+E+L +I HQ+LI+ GETGSGKTTQ+PQ+L E+GYTN G + CT
Sbjct: 392 IQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACT 451
Query: 290 QPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLNDPQ 349
QPRRVAA S+A+RVA EM V LG EVGY+IRF+D T+ ++T+L+Y TDGMLLREFL++P
Sbjct: 452 QPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTS-ERTVLRYMTDGMLLREFLSEPD 510
Query: 350 LSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNATKFSKFFFDCPIF 409
L+SYS +M+DEAHERTL TDIL GL++ + + R +L+++++SATM+ +FS FF D P+F
Sbjct: 511 LASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVF 570
Query: 410 NVPGRRFPVDIHYTLQPEGNYINAAITTIFQIHTTQKLPGDILVFLTGQEEIESMQTKLL 469
+PGRRFPVDI YT PE +Y+ A + ++ QIH TQ PGDILVFLTGQEEIE+ L
Sbjct: 571 RIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQP-PGDILVFLTGQEEIEAACEMLQ 629
Query: 470 EILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKNCRKVVLATNIAETSLTIDGIKF 529
+ +L +K +LLV+PIYANLP + Q++IF+PTP RKVV+ATNIAETS TI+GI +
Sbjct: 630 DPCRRL-GSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSPTIEGIIY 688
Query: 530 VVDPGFVKEQSYS--GGVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTKWSYYNELE 587
V+DPGF K++SY+ G+ L PCS+AS +QRAGRAGR+ GKCFRL+T W+Y +ELE
Sbjct: 689 VLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELE 748
Query: 588 KVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALENLYAIGALNSRGAI 647
+ PEI HF LD P L LE LYA+GALN G +
Sbjct: 749 ETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLTLEQLYALGALNHLGEL 808
Query: 648 TKVGQVMCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESNSIFVPGLNS--EE 705
T G+ M + P DP +K+I +S + SC+ EI+T+ +ML +NSIF +
Sbjct: 809 TTSGRKMAELPVDPMLSKMILASE-KYSCS---EEILTVAAMLSVNNSIFYRPKDKVVHA 864
Query: 706 KTKLFGSLMQSSDHMLYLWIYEQWEENGYSRRWCQDFKLQHKTMKRVLRIRQQLWKYCRK 765
+ DH++ L +Y QW E+GYS +WC + +Q ++M+R +R+QL
Sbjct: 865 DNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCCENFVQFRSMRRARDVREQL------ 918
Query: 766 QDFLLKHDQNLTQLKENMPRSVIEAKIIKCFISGFPTNIAKLSKQGYTNIKQDLSVSVHP 825
+ L + + L+ + + R + K +G+ + A+L++ GY +KQ +V +HP
Sbjct: 919 EGLLERVEVGLSSCQGDYIR------VRKAITAGYFYHTARLTRSGYRTVKQQQTVFIHP 972
Query: 826 SSVIFNRMKQEGKPMKYILYQSLMLTSKEFIRDCITFDKYEWLTETMPHIYK 877
+S +F + +++LY L+LT+KEF+R + + WL E PH YK
Sbjct: 973 NSSLFEQQP------RWLLYHELVLTTKEFMRQVLEIES-SWLLEVAPHYYK 1017
>At2g35340 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 1087
Score = 578 bits (1491), Expect = e-165
Identities = 348/808 (43%), Positives = 483/808 (59%), Gaps = 74/808 (9%)
Query: 91 LEDDIKRYGWNNLTVSEREEISLKRELLKLLNETGKDYAENGD---TSGFKMQDEVASKK 147
+ED+ +G LT E E KRE+ +L+ ++ ++ G+ + Q V +K
Sbjct: 312 IEDEPYLFGDEKLTEREIREFRYKREIYELIKKSTQEEDNVGEYRMPDAYDQQGSVDQEK 371
Query: 148 QLLTAKLRNK----TDRVN-------WEEEQMKKSVIKADADEIKVKDSDNYEFVFDPES 196
+ + R + +++N WE+ Q++ + +K A +V SDNYEFVF E
Sbjct: 372 RFAVSVQRYRDMGSAEKMNPFAEQEAWEDHQIENAALKFGAKNKEV--SDNYEFVF--ED 427
Query: 197 MIDFTDDTTDILEPVEDGRLAEALEEQINKMKSIKETRKSLPVYQYRQEILDSIRQHQIL 256
IDF + + + E RK+LP+Y YR ++L++++ HQ+L
Sbjct: 428 QIDFI---------------------KASVLAGDNEDRKALPIYTYRDQLLNAVKDHQVL 466
Query: 257 IVVGETGSGKTTQLPQFLVEDGYTNDGKCVVCTQPRRVAATSIASRVADEMDVILGKEVG 316
I+VGETGSGKTTQ+PQ+L E GYT GK V CTQPRRVAA S+A+RVA EM LG EVG
Sbjct: 467 IIVGETGSGKTTQIPQYLHEAGYTKLGK-VGCTQPRRVAAMSVAARVAQEMGGKLGHEVG 525
Query: 317 YNIRFDDRTTPDKTILKYTTDGMLLREFLNDPQLSSYSAIMIDEAHERTLSTDILLGLLR 376
Y+IRF+D T+ +KTILKY TDGMLLRE L +P L SYS I++DEAHERTL TDIL GL++
Sbjct: 526 YSIRFEDCTS-EKTILKYMTDGMLLRELLGEPDLGSYSVIIVDEAHERTLRTDILFGLVK 584
Query: 377 GILQDRKDLRLIISSATMNATKFSKFFFDCPIFNVPGRRFPVDIHYTLQPEGNYINAAIT 436
I + R DL+L+ISSATM+A KFS FF PIF PGRR+PVDI +T PE +Y++AAIT
Sbjct: 585 DIARARPDLKLLISSATMDAEKFSDFFDQAPIFRFPGRRYPVDICFTTAPEADYMDAAIT 644
Query: 437 TIFQIHTTQKLPGDILVFLTGQEEIESMQTKLLEILSKLDNTKFPDLLVVPIYANLPQEQ 496
T+ IH + L GD+LVFL GQEEIE+++ L + L TK +L++ PIYANLP E
Sbjct: 645 TVLTIHVKEPL-GDVLVFLPGQEEIEAVEENLKHKIRGL-GTKIRELIICPIYANLPSEL 702
Query: 497 QSKIFEPTPKNCRKVVLATNIAETSLTIDGIKFVVDPGFVKEQSYS--GGVSKLVTVPCS 554
Q+KIFEPTP+ RKVVLATNIAETSLTIDGIK+VVDPGF K +SY+ G+ L+ P S
Sbjct: 703 QAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPIS 762
Query: 555 RASVDQRAGRAGRLGPGKCFRLFTKWSYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXX 614
+AS QR GRAGR PGKC+RL+T ++YYN+LE PEI
Sbjct: 763 KASATQRTGRAGRTSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLSLKSLGIHNL 822
Query: 615 XHFPMLDKPKTIQLSEALENLYAIGALNSRGAITKVGQVMCDFPCDPEYAKVIYSSVFEE 674
+F +D P + L ++LE L+A+GALN G +TK G+ M +FP DP +K+I S +
Sbjct: 823 LNFDFMDPPPSEALIKSLELLFALGALNQLGELTKAGRRMAEFPLDPMLSKMIVVS-DKY 881
Query: 675 SCNGVLPEIVTIVSMLQESNSIFV----PGLNSEEKTKLFGSLMQSSDHMLYLWIYEQWE 730
C+ EI++I +ML SIF ++++ K F + DH+ +L IY W+
Sbjct: 882 KCS---DEIISIAAMLSIGPSIFYRPKDKQVHADNAMKNF-HVGNVGDHIAFLKIYNSWK 937
Query: 731 ENGYSRRWCQDFKLQHKTMKRVLRIRQQLWKYCRKQDFLLKHDQNLTQLKENMPRSVIEA 790
E YS +WC + +Q ++MKR IR QL + + + + N
Sbjct: 938 ETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDVSSNANELD------------ 985
Query: 791 KIIKCFISGFPTNIAKLSKQG-YTNIKQDLSVSVHPSSVIFNRMKQEGKPMKYILYQSLM 849
I K ++GF + AKL K G Y +K +V +HP+S + + ++++Y L+
Sbjct: 986 SIRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPASGLSQVLP------RWVVYHQLV 1039
Query: 850 LTSKEFIRDCITFDKYEWLTETMPHIYK 877
LTSKE++R +T K EWL E PH Y+
Sbjct: 1040 LTSKEYMRQ-VTELKPEWLIEIAPHYYQ 1066
>At4g16680 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 883
Score = 558 bits (1439), Expect = e-158
Identities = 349/847 (41%), Positives = 496/847 (58%), Gaps = 74/847 (8%)
Query: 63 SIKSMVEQKVLTKRQRSQLHWLVKDLQILEDDIKRYGWNNLTVSER----EEISLKRELL 118
SIK + +K+ TKR+R + ++ + E+ K W + S+ E+S ++ L
Sbjct: 36 SIKFNIPKKISTKRRRISVE--EEEEEEDENKTKLSSWEKVLSSDEILRLREVSRRKYLT 93
Query: 119 ----KLLNETGKDYAENGDTSGFKMQDE------VASKKQLLTAKLRN---------KTD 159
K + E + ++ D G++ D + KK+ AK R T+
Sbjct: 94 DRENKKVEELRDERKDDDDVEGYRFPDAYDQEGCIDQKKRFDVAKERYCERRRSGRVVTE 153
Query: 160 RVNWEEEQMKKSVIKADADEIKVKDSDNYEFVFDPESMIDFTDDTTDILEPVEDGRLAEA 219
+ WE+ Q +K+ ++ A + K + D YEFVFD + F +++++ G ++
Sbjct: 154 QEAWEDHQAQKARVRFGAKD-KKQVVDGYEFVFD--DLTGFVEESSEAETGKHRGCYSKT 210
Query: 220 LEEQINKMKSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGY 279
E+ +E R+ LP++ YR+E+L I ++Q+L++VGETGSGKTTQ+PQ+L E GY
Sbjct: 211 AAEKA------REGREFLPIHGYREELLKLIEENQVLVIVGETGSGKTTQIPQYLQEAGY 264
Query: 280 TNDGKCVVCTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGM 339
T GK + CTQPRRVAA S+ASRVA E+ V LG EVGY+IRF+D T+ +KT++KY TDGM
Sbjct: 265 TKRGK-IGCTQPRRVAAMSVASRVAQEVGVKLGHEVGYSIRFEDCTS-EKTVIKYMTDGM 322
Query: 340 LLREFLNDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNATKF 399
LLRE L +P+L SYS I+IDEAHERTLSTDIL L++ + + R DLRLIISSAT+ A KF
Sbjct: 323 LLRELLIEPKLDSYSVIIIDEAHERTLSTDILFALVKDVAKVRPDLRLIISSATLEAKKF 382
Query: 400 SKFFFDCPIFNVPGRRFPVDIHYTLQPEGNYINAAITTIFQIHTTQKLPGDILVFLTGQE 459
S++F I+ +PGRR+PV+ + PE +Y+ I T+ QIH T+ + GDILVFLTGQE
Sbjct: 383 SEYFDSARIYLIPGRRYPVEKLFRKCPEPDYLETVIRTVVQIHQTEAI-GDILVFLTGQE 441
Query: 460 EIESMQTKLLEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKNCRKVVLATNIAE 519
EIE+++T L + L TK ++++ PIY+NLP Q+K+FEP PK RKVVLATNIAE
Sbjct: 442 EIETVETNLKRRMMDL-GTKGSEIIICPIYSNLPTPLQAKVFEPAPKGTRKVVLATNIAE 500
Query: 520 TSLTIDGIKFVVDPGFVKEQSYS--GGVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLF 577
TSLTIDG+K+V+DPG+ K SY+ G+ L+ P S+AS QRAGR+GR GPGKCFRL+
Sbjct: 501 TSLTIDGVKYVIDPGYCKINSYNPRTGMESLLVTPISKASAAQRAGRSGRTGPGKCFRLY 560
Query: 578 TKWSYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALENLYA 637
+LE PEI +F +D P L +ALE LYA
Sbjct: 561 N----IKDLEPTTIPEIQRANLASVVLTLKSLGIQDVFNFDFMDPPPENALLKALELLYA 616
Query: 638 IGALNSRGAITKVGQVMCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESNSIF 697
+GAL+ G ITKVG+ M +FP DP +K+I S + C+ EI+TI +ML NS+F
Sbjct: 617 LGALDEIGEITKVGERMVEFPVDPMLSKMIVGSE-KYKCS---KEIITIAAMLSVGNSVF 672
Query: 698 VPGLNSE---EKTKL--FGSLMQSSDHMLYLWIYEQWEENGYSRRWCQDFKLQHKTMKRV 752
N + +K ++ + DH+ L +Y W+E YS +WC + +Q K+MKR
Sbjct: 673 YRPKNQQVFADKARMDFYEDTENVGDHIALLRVYNSWKEENYSTQWCCEKFIQSKSMKRA 732
Query: 753 LRIRQQLWKYCRKQDFLLKHDQN-LTQLKENMPRSVIEAKIIKCFISGFPTNIAKLSKQG 811
IR QL K L + N L +K K ++GF + AKL K G
Sbjct: 733 RDIRDQLLGLLNKIGVELTSNPNDLDAIK-------------KAILAGFFPHSAKLQKNG 779
Query: 812 -YTNIKQDLSVSVHPSSVIFNRMKQEGKPMKYILYQSLMLTSKEFIRDCITFDKYEWLTE 870
Y +K+ +V VHP+S +F P K+++Y L+LT+KE++R T K EWL E
Sbjct: 780 SYRRVKEPQTVYVHPNSGLFG-----ASPSKWLVYHELVLTTKEYMRH-TTEMKPEWLIE 833
Query: 871 TMPHIYK 877
PH YK
Sbjct: 834 IAPHYYK 840
>Hs4826690 [A] KOG0922 DEAH-box RNA helicase
Length = 1220
Score = 529 bits (1363), Expect = e-150
Identities = 286/656 (43%), Positives = 415/656 (62%), Gaps = 37/656 (5%)
Query: 229 SIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDGKCVVC 288
SI E R+SLP+Y+ +++++ ++ +QILIV+GETGSGKTTQ+ Q+L E GYT+ GK + C
Sbjct: 557 SILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-IGC 615
Query: 289 TQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLNDP 348
TQPRRVAA S+A RV++E LG+EVGY IRF+D T+P+ T++KY TDGMLLRE L DP
Sbjct: 616 TQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPE-TVIKYMTDGMLLRECLIDP 674
Query: 349 QLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNATKFSKFFFDCPI 408
L+ Y+ IM+DEAHERT+ TD+L GLL+ +Q R+D++LI++SAT++A KFS++F++ PI
Sbjct: 675 DLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPI 734
Query: 409 FNVPGRRFPVDIHYTLQPEGNYINAAITTIFQIHTTQKLPGDILVFLTGQEEIESMQTKL 468
F +PGR +PV+I YT +PE +Y++A++ T+ QIH T+ PGDILVFLTGQEEI++ L
Sbjct: 735 FTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEP-PGDILVFLTGQEEIDTACEIL 793
Query: 469 LEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKNCRKVVLATNIAETSLTIDGIK 528
E + L P+L+++P+Y+ LP E Q++IF+P P RKVV+ATNIAETSLTIDGI
Sbjct: 794 YERMKSL-GPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIY 852
Query: 529 FVVDPGFVKEQSYSG--GVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTKWSYYNEL 586
+VVDPGFVK++ Y+ G+ +LV P S+A QRAGRAGR GPGKC+RL+T+ +Y +E+
Sbjct: 853 YVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEM 912
Query: 587 EKVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALENLYAIGALNSRGA 646
PEI F +D P L A+E LY +GAL+ G
Sbjct: 913 LTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGL 972
Query: 647 ITKVGQVMCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESNSIFVP----GLN 702
+T++G+ M +FP +P K++ SV G E++TIVSML N + P L
Sbjct: 973 LTRLGRRMAEFPLEPMLCKMLIMSVH----LGCSEEMLTIVSMLSVQNVFYRPKDKQALA 1028
Query: 703 SEEKTKLFGSLMQSSDHMLYLWIYEQWEENGYSRRWCQDFKLQHKTMKRVLRIRQQLWKY 762
++K K DH+ L +Y W+ N +S WC + +Q ++++R IR+Q+
Sbjct: 1029 DQKKAKFH---QTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQM--- 1082
Query: 763 CRKQDFLLKHDQNLTQLKENMPRSVIEAKIIKCFISGFPTNIAKLSKQ-GYTNIKQDLSV 821
+ +H ++ ++ R + K SGF N AK Q GY + V
Sbjct: 1083 ---LGIMDRHKLDVVSCGKSTVR------VQKAICSGFFRNAAKKDPQEGYRTLIDQQVV 1133
Query: 822 SVHPSSVIFNRMKQEGKPMKYILYQSLMLTSKEFIRDCITFDKYEWLTETMPHIYK 877
+HPSS +FNR + +++Y L+LT+KE++R+ T D WL E P +K
Sbjct: 1134 YIHPSSALFNRQPE------WVVYHELVLTTKEYMREVTTIDP-RWLVEFAPAFFK 1182
>At3g26560 [A] KOG0922 DEAH-box RNA helicase
Length = 1168
Score = 527 bits (1357), Expect = e-149
Identities = 287/653 (43%), Positives = 413/653 (62%), Gaps = 31/653 (4%)
Query: 229 SIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDGKCVVC 288
SI+E R+SLP+Y+ ++E++ ++ +Q+L+V+GETGSGKTTQ+ Q+L E GYT GK + C
Sbjct: 507 SIQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGK-IGC 565
Query: 289 TQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLNDP 348
TQPRRVAA S+A RVA+E LG+EVGY IRF+D T PD T++KY TDGMLLRE L D
Sbjct: 566 TQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPD-TVIKYMTDGMLLREILIDE 624
Query: 349 QLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNATKFSKFFFDCPI 408
LS YS IM+DEAHERT+ TD+L GLL+ +++ R DLRLI++SAT++A KFS +FF+C I
Sbjct: 625 NLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNI 684
Query: 409 FNVPGRRFPVDIHYTLQPEGNYINAAITTIFQIHTTQKLPGDILVFLTGQEEIESMQTKL 468
F +PGR FPV+I YT QPE +Y++AA+ T+ QIH T+ GDILVFLTGQEEI+S L
Sbjct: 685 FTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEP-EGDILVFLTGQEEIDSACQSL 743
Query: 469 LEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKNCRKVVLATNIAETSLTIDGIK 528
E + L P+L+++P+Y+ LP E QS+IF+P P RKVV+ATNIAE SLTIDGI
Sbjct: 744 YERMKGL-GKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIY 802
Query: 529 FVVDPGFVKEQSYS--GGVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTKWSYYNEL 586
+VVDPGF K+ Y+ G+ LV P S+AS QRAGRAGR GPGKC+RL+T+ +Y NE+
Sbjct: 803 YVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEM 862
Query: 587 EKVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALENLYAIGALNSRGA 646
PEI F +D P+ L A+E LY++GAL+ G
Sbjct: 863 PPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALDEEGL 922
Query: 647 ITKVGQVMCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESNSIFVPGLNSEEK 706
+TK+G+ M +FP +P +K++ +SV + C+ EI+T+++M+Q N + P +
Sbjct: 923 LTKLGRKMAEFPLEPPLSKMLLASV-DLGCS---DEILTMIAMIQTGNIFYRPREKQAQA 978
Query: 707 TKLFGSLMQ-SSDHMLYLWIYEQWEENGYSRRWCQDFKLQHKTMKRVLRIRQQLWKYCRK 765
+ Q DH+ L +YE W+ +S WC + +Q ++++R +R+QL
Sbjct: 979 DQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQL------ 1032
Query: 766 QDFLLKHDQNLTQLKENMPRSVIEAKIIKCFISGFPTNIAKLSKQ-GYTNIKQDLSVSVH 824
+ K+ ++ +N KI K +GF + A+ Q GY + ++ V +H
Sbjct: 1033 LSIMDKYKLDVVTAGKNF------TKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIH 1086
Query: 825 PSSVIFNRMKQEGKPMKYILYQSLMLTSKEFIRDCITFDKYEWLTETMPHIYK 877
PSS +F R +++Y L++T+KE++R+ D +WL E P +K
Sbjct: 1087 PSSALFQRQPD------WVIYHDLVMTTKEYMREVTVIDP-KWLVELAPRFFK 1132
>SPAC10F6.02c [A] KOG0922 DEAH-box RNA helicase
Length = 1168
Score = 526 bits (1355), Expect = e-149
Identities = 303/773 (39%), Positives = 462/773 (59%), Gaps = 44/773 (5%)
Query: 110 EISLKRELLKLLNETGKDYAENGDTSGFKMQDEVASKKQLLTAKLRNKTDRVNWEEEQMK 169
++SLK +K++ A +G S MQ ++ + + ++R K ++ E+E K
Sbjct: 396 KVSLKLSPIKVVK------APDGSLSRAAMQGQILANDR---REIRQKEAKLKSEQEMEK 446
Query: 170 KSVIKADADEIKVKDSDNYEFVFDPESMIDFTDDTTDILEPVEDGRLAEALEEQINKMKS 229
+ + + D + + + T +T + + ++ + S
Sbjct: 447 QDLSLSWQDTMSNPQDRKFAQDVRDSAARQLTSETPSWRQATRNANISYGKRTTL----S 502
Query: 230 IKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDGKCVVCT 289
+KE R+ LPV++ R++ L+++ ++QIL+++GETGSGKTTQ+ Q+L E+GYT+D K + CT
Sbjct: 503 MKEQREGLPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSDSKMIGCT 562
Query: 290 QPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLNDPQ 349
QPRRVAA S+A RVA+E+ +G+EVGY IRF+D+T+ T +KY TDGML RE L DP
Sbjct: 563 QPRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSR-MTQIKYMTDGMLQRECLVDPL 621
Query: 350 LSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNATKFSKFFFDCPIF 409
LS YS I++DEAHERT++TD+L GLL+G + R DL+LI++SAT++A +FS +F+ CPIF
Sbjct: 622 LSKYSVIILDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSATLDAERFSSYFYKCPIF 681
Query: 410 NVPGRRFPVDIHYTLQPEGNYINAAITTIFQIHTTQKLPGDILVFLTGQEEIESMQTKLL 469
+PGR +PV+I YT QPE +Y++AA+ T+ QIH ++ PGDILVFLTGQEEI++ ++L
Sbjct: 682 TIPGRSYPVEIMYTKQPEADYLDAALMTVMQIHLSEG-PGDILVFLTGQEEIDT-SCEIL 739
Query: 470 EILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKNCRKVVLATNIAETSLTIDGIKF 529
SK+ P+L+++P+Y+ LP E QS+IFEP P RKVV+ATNIAETSLTIDGI +
Sbjct: 740 YERSKMLGDSIPELVILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIAETSLTIDGIYY 799
Query: 530 VVDPGFVKEQSYSG--GVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTKWSYYNELE 587
VVDPGFVK+ + G+ L+ P S+A QR+GRAGR GPGKC+RL+T+ +Y NE+
Sbjct: 800 VVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTESAYRNEML 859
Query: 588 KVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALENLYAIGALNSRGAI 647
P PEI +F +D P + AL+NLYA+ AL+ G +
Sbjct: 860 PSPIPEIQRQNLSHTILMLKAMGINDLLNFDFMDPPPAQTMIAALQNLYALSALDDEGLL 919
Query: 648 TKVGQVMCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESNSIFVPGLNSEEKT 707
T +G+ M DFP +P+ +KV+ +SV E C+ E+++I++ML N P +E
Sbjct: 920 TPLGRKMADFPMEPQLSKVLITSV-ELGCS---EEMLSIIAMLSVPNIWSRPREKQQEAD 975
Query: 708 KLFGSLMQ-SSDHMLYLWIYEQWEENGYSRRWCQDFKLQHKTMKRVLRIRQQLWKYCRKQ 766
+ SDH+ L +Y W+ N S WC + +Q + M+R +R+QL + +
Sbjct: 976 RQRAQFANPESDHLTLLNVYTTWKMNRCSDNWCYEHYIQARGMRRAEDVRKQLIRLMDR- 1034
Query: 767 DFLLKHDQNLTQLKENMPRSVIEAKIIKCFISGFPTNIAKL-SKQG-YTNIKQDLSVSVH 824
+H K + I++ SG+ TN+AK S +G Y I ++ V +H
Sbjct: 1035 ---YRHPVVSCGRKREL--------ILRALCSGYFTNVAKRDSHEGCYKTIVENAPVYMH 1083
Query: 825 PSSVIFNRMKQEGKPMKYILYQSLMLTSKEFIRDCITFDKYEWLTETMPHIYK 877
PS V+F GK ++++Y L+ TSKE++ T + +WL E P +K
Sbjct: 1084 PSGVLF------GKAAEWVIYHELIQTSKEYMHTVSTVNP-KWLVEVAPTFFK 1129
>7303231 [A] KOG0922 DEAH-box RNA helicase
Length = 1242
Score = 520 bits (1340), Expect = e-147
Identities = 286/656 (43%), Positives = 413/656 (62%), Gaps = 37/656 (5%)
Query: 229 SIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDGKCVVC 288
++ E R+SLP+Y+ R +++ ++ +QILIV+GETGSGKTTQ+ Q+L E G+T GK + C
Sbjct: 578 TLVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTARGK-IGC 636
Query: 289 TQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLNDP 348
TQPRRVAA S+A RVA+E LG+EVGY IRF+D T+P+ TI+KY TDGMLLRE L +
Sbjct: 637 TQPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPE-TIIKYMTDGMLLRECLMEA 695
Query: 349 QLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNATKFSKFFFDCPI 408
+L SYS IM+DEAHERT+ TD+L GLL+ +Q R +L+LI++SAT++A KFS++FF PI
Sbjct: 696 ELKSYSVIMLDEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFKAPI 755
Query: 409 FNVPGRRFPVDIHYTLQPEGNYINAAITTIFQIHTTQKLPGDILVFLTGQEEIESMQTKL 468
F +PGR FPV++ YT +PE +Y++A++ T+ QIH + PGDIL+FLTGQEEI++ L
Sbjct: 756 FTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREP-PGDILLFLTGQEEIDTACEIL 814
Query: 469 LEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKNCRKVVLATNIAETSLTIDGIK 528
E + L P+L+++P+Y+ LP E Q++IF+P P RKVV+ATNIAETSLTIDGI
Sbjct: 815 YERMKSL-GPDVPELIILPVYSALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTIDGIF 873
Query: 529 FVVDPGFVKEQSYSG--GVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTKWSYYNEL 586
+VVDPGFVK++ Y+ G+ LV P S+A+ QRAGRAGR GPGK +RL+T+ +Y +E+
Sbjct: 874 YVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDEM 933
Query: 587 EKVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALENLYAIGALNSRGA 646
P PEI HF +D P L ALE L+++ AL+ G
Sbjct: 934 LPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLVMALEQLHSLSALDDEGL 993
Query: 647 ITKVGQVMCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESNSIFVP----GLN 702
+T++G+ M +FP +P +K++ SV + + EI+TIVSML N + P L
Sbjct: 994 LTRLGRRMAEFPLEPNLSKMLIMSVALQCSD----EILTIVSMLSVQNVFYRPKDKQALA 1049
Query: 703 SEEKTKLFGSLMQSSDHMLYLWIYEQWEENGYSRRWCQDFKLQHKTMKRVLRIRQQLWKY 762
++K K DH+ L +Y W+ N +S WC + +Q +T+KR +R+QL
Sbjct: 1050 DQKKAKF---NQAEGDHLTLLAVYNSWKNNKFSNAWCYENFVQIRTLKRSQDVRKQL--- 1103
Query: 763 CRKQDFLLKHDQNLTQLKENMPRSVIEAKIIKCFISGFPTNIAKLSKQ-GYTNIKQDLSV 821
+ +H ++ +N +I K SGF N AK Q GY + V
Sbjct: 1104 ---LGIMDRHKLDVVSAGKN------SVRIQKAICSGFFRNAAKKDPQEGYRTLVDSQVV 1154
Query: 822 SVHPSSVIFNRMKQEGKPMKYILYQSLMLTSKEFIRDCITFDKYEWLTETMPHIYK 877
+HPSS +FNR + +++Y L+ T+KE++R+ T D +WL E P ++
Sbjct: 1155 YIHPSSALFNRQPE------WVIYHELVQTTKEYMREVTTIDP-KWLVEFAPSFFR 1203
>YER013w [A] KOG0922 DEAH-box RNA helicase
Length = 1145
Score = 499 bits (1286), Expect = e-141
Identities = 283/672 (42%), Positives = 407/672 (60%), Gaps = 35/672 (5%)
Query: 212 EDGRLAEALEEQINKMKSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLP 271
E R+ E++ I R++LPVY R E++ ++R +Q L++VGETGSGKTTQ+
Sbjct: 458 EKNRMNESISYGKRTSLPISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQIT 517
Query: 272 QFLVEDGYTNDGKCVVCTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTI 331
Q+L E+G++N G + CTQPRRVAA S+A RVA+E+ +G +VGY IRF+D T PD T
Sbjct: 518 QYLDEEGFSNYGM-IGCTQPRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPD-TR 575
Query: 332 LKYTTDGMLLREFLNDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISS 391
+KY TDGML RE L DP++S YS IM+DEAHERT++TD+L LL+ R +L++I++S
Sbjct: 576 IKYMTDGMLQREALLDPEMSKYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTS 635
Query: 392 ATMNATKFSKFFFDCPIFNVPGRRFPVDIHYTLQPEGNYINAAITTIFQIHTTQKLPGDI 451
AT+N+ KFS++F +CPI N+PG+ FPV++ Y+ P+ +YI AA+ + IH + PGDI
Sbjct: 636 ATLNSAKFSEYFLNCPIINIPGKTFPVEVLYSQTPQMDYIEAALDCVIDIHINEG-PGDI 694
Query: 452 LVFLTGQEEIESMQTKLLEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKNCRKV 511
LVFLTGQEEI+S L + + L ++ +LL++P+Y+ LP E QSKIFEPTPK RKV
Sbjct: 695 LVFLTGQEEIDSCCEILYDRVKTLGDS-IGELLILPVYSALPSEIQSKIFEPTPKGSRKV 753
Query: 512 VLATNIAETSLTIDGIKFVVDPGFVKEQSYS--GGVSKLVTVPCSRASVDQRAGRAGRLG 569
V ATNIAETS+TIDGI +VVDPGF K Y+ G+ +L+ P S+A +QR GRAGR G
Sbjct: 754 VFATNIAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRTG 813
Query: 570 PGKCFRLFTKWSYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLS 629
PGKC+RL+T+ ++YNE+ + PEI F +D P +
Sbjct: 814 PGKCYRLYTESAFYNEMLENTVPEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPKNLML 873
Query: 630 EALENLYAIGALNSRGAITKVGQVMCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSM 689
AL LY + +L+ G +T +G+ M FP DP ++ + SSV + C+ EIVTI+SM
Sbjct: 874 NALTELYHLQSLDDEGKLTNLGKEMSLFPMDPTLSRSLLSSV-DNQCS---DEIVTIISM 929
Query: 690 LQESNSIFVP---GLNSEEKTKLFGSLMQSSDHMLYLWIYEQWEENGYSRRWCQDFKLQH 746
L N + P L ++ K F DH+ L +Y +W++ YS ++C+ L
Sbjct: 930 LSVQNVFYRPKDRQLEADSKKAKFHH--PYGDHLTLLNVYTRWQQANYSEQYCKTNFLHF 987
Query: 747 KTMKRVLRIRQQLWKYCRKQDFLLKHDQNLTQLKENMPRSVIEAKIIKCFISGFPTNIAK 806
+ +KR ++ Q+ +K L + L I K F+SGF N AK
Sbjct: 988 RHLKRARDVKSQISMIFKKIGLKLISCHSDPDL------------IRKTFVSGFFMNAAK 1035
Query: 807 LSKQ-GYTNIKQDLSVSVHPSSVIFNRMKQEGKPMKYILYQSLMLTSKEFIRDCITFDKY 865
Q GY I V +HPSS ++ GK +Y++Y S++LTS+E++ +T +
Sbjct: 1036 RDSQVGYKTINGGTEVGIHPSSSLY------GKEYEYVMYHSIVLTSREYMSQ-VTSIEP 1088
Query: 866 EWLTETMPHIYK 877
+WL E PH YK
Sbjct: 1089 QWLLEVAPHFYK 1100
>CE01889 [A] KOG0922 DEAH-box RNA helicase
Length = 1200
Score = 499 bits (1285), Expect = e-141
Identities = 276/653 (42%), Positives = 403/653 (61%), Gaps = 31/653 (4%)
Query: 229 SIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDGKCVVC 288
S+ E R+SLP++ ++ +++++ +QIL+VVGETGSGKTTQ+ Q+ +E G GK + C
Sbjct: 532 SMVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGK-IGC 590
Query: 289 TQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLNDP 348
TQPRRVAA S+A RVA+E LG +VGY IRF+D T+ D TI+KY TDGMLLRE L DP
Sbjct: 591 TQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQD-TIIKYMTDGMLLRECLIDP 649
Query: 349 QLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNATKFSKFFFDCPI 408
LS YS IM+DEAHERT+ TD+L GLL+ + R +L+LII+SAT+++ KFS++F + PI
Sbjct: 650 DLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPI 709
Query: 409 FNVPGRRFPVDIHYTLQPEGNYINAAITTIFQIHTTQKLPGDILVFLTGQEEIESMQTKL 468
F +PGR FPV+I YT +PE +Y+ AA T+ QIH T+ PGD+LVFLTGQEEI++ L
Sbjct: 710 FTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEP-PGDVLVFLTGQEEIDTSCEVL 768
Query: 469 LEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKNCRKVVLATNIAETSLTIDGIK 528
E + + P+L+++P+Y LP E Q++IF+P P RKVV+ATNIAETSLTIDGI
Sbjct: 769 YERMKSM-GPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIF 827
Query: 529 FVVDPGFVKEQSYS--GGVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTKWSYYNEL 586
+VVDPGFVK++ Y+ G+ LV P S+A+ QR+GRAGR GPGKC+RL+T+ ++ +E+
Sbjct: 828 YVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEM 887
Query: 587 EKVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALENLYAIGALNSRGA 646
P PEI F +D P + AL L+ + AL+ G
Sbjct: 888 LPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSALDGDGL 947
Query: 647 ITKVGQVMCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESNSIFVPGLNSEEK 706
+TK+G+ M +FP +P +K++ SV + C+ E++TIV+ML N + P +
Sbjct: 948 LTKLGRRMAEFPLEPSLSKLLIMSV-DLGCS---EEVLTIVAMLNVQNIFYRPKEKQDHA 1003
Query: 707 TKLFGSLMQ-SSDHMLYLWIYEQWEENGYSRRWCQDFKLQHKTMKRVLRIRQQLWKYCRK 765
+ Q DH+ L +Y W+ + +S+ WC + +Q ++MKR IR+QL +
Sbjct: 1004 DQKKAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDR 1063
Query: 766 QDFLLKHDQNLTQLKENMPRSVIEAKIIKCFISGFPTNIAKLSKQ-GYTNIKQDLSVSVH 824
L+ + R V +++ K SGF N AK Q GY + +V +H
Sbjct: 1064 HKLLM----------VSCGRDV--SRVQKAICSGFFRNAAKRDPQEGYRTLTDGQNVYIH 1111
Query: 825 PSSVIFNRMKQEGKPMKYILYQSLMLTSKEFIRDCITFDKYEWLTETMPHIYK 877
PSS F + + +++Y L++T+KE++R+ D +WL E P +K
Sbjct: 1112 PSSACFQQQPE------WVVYHELVMTTKEYMREVTAIDP-KWLVEFAPSFFK 1157
>Hs17999539 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase
Length = 1227
Score = 489 bits (1260), Expect = e-138
Identities = 282/667 (42%), Positives = 407/667 (60%), Gaps = 33/667 (4%)
Query: 215 RLAEALEEQINKMKSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFL 274
R +EA E K KSI E R+ LP++ +QE+L IR + I+IVVGETGSGKTTQL Q+L
Sbjct: 511 RKSEASSE-FAKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYL 569
Query: 275 VEDGYTNDGKCVVCTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKY 334
EDGYT+ G + CTQPRRVAA S+A RV++EM LG+EVGY IRF+D T+ + T++KY
Sbjct: 570 HEDGYTDYGM-IGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTS-ENTLIKY 627
Query: 335 TTDGMLLREFLNDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATM 394
TDG+LLRE L + L YSAI++DEAHER+L+TD+L GLLR ++ R DL+LI++SATM
Sbjct: 628 MTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATM 687
Query: 395 NATKFSKFFFDCPIFNVPGRRFPVDIHYTLQPEGNYINAAITTIFQIHTTQKLPGDILVF 454
+A KF+ FF + PIF++PGR FPVDI ++ P+ +Y+ AA+ Q+H + PGDIL+F
Sbjct: 688 DAEKFAAFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLS-GAPGDILIF 746
Query: 455 LTGQEEIESMQTKLLEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKNCRKVVLA 514
+ GQE+IE +++E L +L+N P L V+PIY+ LP + Q+KIF+ P RK ++A
Sbjct: 747 MPGQEDIEVTSDQIVEHLEELENA--PALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVA 804
Query: 515 TNIAETSLTIDGIKFVVDPGFVKEQSYSG--GVSKLVTVPCSRASVDQRAGRAGRLGPGK 572
TNIAETSLT+DGI FV+D G+ K + ++ G+ L P S+A+ +QR+GRAGR GPG+
Sbjct: 805 TNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQ 864
Query: 573 CFRLFTKWSYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEAL 632
CFRL+T+ +Y NEL PEI F +D P + ++
Sbjct: 865 CFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSM 924
Query: 633 ENLYAIGALNSRGAITKVGQVMCDFPCDPEYAKVIYSSVFEESCN-GVLPEIVTIVSMLQ 691
L+ +GAL++ G +T G++M +FP DP +K++ SC+ G EI+ IVSML
Sbjct: 925 YQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLI-----VSCDMGCSSEILLIVSMLS 979
Query: 692 ESNSIFVPGLNSEEKTKLFGSL-MQSSDHMLYLWIYEQWEENGYSRRWCQDFKLQHKTMK 750
+ P EE ++ + SDH+ YL +Y QW+ N YS WC D + K M+
Sbjct: 980 VPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMR 1039
Query: 751 RVLRIRQQLWKYCRKQDFLLKHDQNLTQLKENMPRSVIEAKIIKCFISGFPTNIAKLSKQ 810
+V +R QL +D +++ +L + + KC + + AKL
Sbjct: 1040 KVREVRAQL------KDIMVQQRMSLASCGTDWD------IVRKCICAAYFHQAAKLKGI 1087
Query: 811 G-YTNIKQDLSVSVHPSSVIFNRMKQEGKPMKYILYQSLMLTSKEFIRDCITFDKYEWLT 869
G Y NI+ + +HP+S +F G YI+Y L++T+KE+++ C+T EWL
Sbjct: 1088 GEYVNIRTGMPCHLHPTSSLFGM----GYTPDYIVYHELVMTTKEYMQ-CVTAVDGEWLA 1142
Query: 870 ETMPHIY 876
E P Y
Sbjct: 1143 ELGPMFY 1149
>CE01027 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase
Length = 1131
Score = 481 bits (1239), Expect = e-135
Identities = 276/654 (42%), Positives = 397/654 (60%), Gaps = 31/654 (4%)
Query: 228 KSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDGKCVV 287
KSIK+ R+ LPV+ RQ++++ IR++ ++I+VGETGSGKTTQL Q+L+EDG+ + G +
Sbjct: 432 KSIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSG-LIG 490
Query: 288 CTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLND 347
CTQPRRVAA S+A RVADEM V LG++VGY IRF+D T+ +KTI+KY TDG+LLRE L D
Sbjct: 491 CTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTS-EKTIIKYMTDGILLRECLGD 549
Query: 348 PQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNATKFSKFF-FDC 406
L YSAI++DEAHER+L+TD+L GLLR ++ R DL+LI++SATM+A KF+ FF +C
Sbjct: 550 GSLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGGNC 609
Query: 407 PIFNVPGRRFPVDIHYTLQPEGNYINAAITTIFQIHTTQKLPGDILVFLTGQEEIESMQT 466
P F +PGR FPV++ + P +Y++AA+ IH + GDIL+F+ GQE+IE
Sbjct: 610 PTFTIPGRTFPVELFHARTPVEDYVDAAVKQAVTIH-LGGMDGDILIFMPGQEDIECTCE 668
Query: 467 KLLEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKNCRKVVLATNIAETSLTIDG 526
+ E L +LD P L V+PIY+ LP + Q+KIF+ P RK ++ATNIAETSLT+DG
Sbjct: 669 MIKEKLGELDEA--PPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNIAETSLTVDG 726
Query: 527 IKFVVDPGFVKEQSYSG--GVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTKWSYYN 584
I FV+DPGF K + Y+ G+ L P S+AS +QR GRAGR GPG+C+RL+T+ + +
Sbjct: 727 ILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQFKD 786
Query: 585 ELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALENLYAIGALNSR 644
EL K PEI F +D P + ++ L+ +GAL++
Sbjct: 787 ELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQLWTLGALDNT 846
Query: 645 GAITKVGQVMCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESNSIFVP-GLNS 703
G +T +G+ M +FP DP +K++ S E C+ E++TIVSML F P G
Sbjct: 847 GQLTPMGRKMVEFPLDPTLSKMLIMSA-EMGCS---DEVLTIVSMLSVPAIFFRPKGREE 902
Query: 704 EEKTKLFGSLMQSSDHMLYLWIYEQWEENGYSRRWCQDFKLQHKTMKRVLRIRQQLWKYC 763
E K + SDH+ +L +Y QW + YS +WC D L K +K+V +R QL +
Sbjct: 903 EADAKKEKFQVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVKALKKVREVRAQLKE-- 960
Query: 764 RKQDFLLKHDQNLTQLKENMPRSVIEAKIIKCFISGFPTNIAKLSKQG-YTNIKQDLSVS 822
+ D L + ++ KC S + N A+L G Y N++ +
Sbjct: 961 ------IMQDLKLPLISNGSEWDIVR----KCICSAYFHNAARLKGIGEYVNVRTGIPCF 1010
Query: 823 VHPSSVIFNRMKQEGKPMKYILYQSLMLTSKEFIRDCITFDKYEWLTETMPHIY 876
+HP+S +F G Y++Y L++T+KE+++ C+T WL E P Y
Sbjct: 1011 LHPTSALFGM----GFMPDYVVYHELIMTAKEYMQ-CVTAVDAIWLAELGPMFY 1059
>CE01334 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 739
Score = 473 bits (1218), Expect = e-133
Identities = 271/671 (40%), Positives = 402/671 (59%), Gaps = 43/671 (6%)
Query: 225 NKMKSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVE-------D 277
N+ +I E R LPV++Y+++ ++ +R +Q + +VGETGSGKTTQ+PQ+ VE
Sbjct: 64 NRYWAIWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQG 123
Query: 278 GYTNDGKCVVCTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTD 337
+ V CTQPRRVAA S+A+RVA+EMDV+LG+EVGY+IRF+D + ++T+LKY TD
Sbjct: 124 QPPGQARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCIS-ERTVLKYCTD 182
Query: 338 GMLLREFLNDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNAT 397
GMLLRE +N P L Y +++DEAHERTL+TDIL+GL++ I+++R D++++I SAT++A
Sbjct: 183 GMLLREAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAG 242
Query: 398 KFSKFFFDCPIFNVPGRRFPVDIHYTLQPEGNYINAAITTIFQIHTTQKLPGDILVFLTG 457
KF ++F DCP+ +VPGR FPV+I +T E +Y+ AAI T+ QIH +++ GDIL+FLTG
Sbjct: 243 KFQRYFEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDILLFLTG 302
Query: 458 QEEIESMQTKLLEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKN------CRKV 511
QEEIE ++ + L L +P+Y+ LP Q +IFEP P N RK
Sbjct: 303 QEEIEEACKRIDREIQAL-GADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKC 361
Query: 512 VLATNIAETSLTIDGIKFVVDPGFVKEQSYSG--GVSKLVTVPCSRASVDQRAGRAGRLG 569
V++TNIAETSLTIDG+ FV+DPGF K++ Y+ V L+ P S+AS QRAGRAGR
Sbjct: 362 VISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTK 421
Query: 570 PGKCFRLFTKWSYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLS 629
PGKCFRL+T+ +Y +E++ PEI HF +D P L
Sbjct: 422 PGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETLM 481
Query: 630 EALENLYAIGALNSRGAITKVGQVMCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSM 689
ALE L + A+N G +T++G +M +FP DP+ AK++ +S E +C+ EI++I +M
Sbjct: 482 RALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITST-ELNCSN---EILSITAM 537
Query: 690 LQESNSIFVPG---LNSEEKTKLFGSLMQSSDHMLYLWIYEQWEENGYSRRWCQDFKLQH 746
L P ++E F + DH+ L +Y +++N +WC D + +
Sbjct: 538 LSVPQCWVRPNEMRTEADEAKARFAHI--DGDHLTLLNVYHSFKQNQEDPQWCYDNFINY 595
Query: 747 KTMKRVLRIRQQLWKYCRKQDFLLKHDQNLTQLKENMPRSVIEAKIIKCFISGFPTNIAK 806
+TMK +R QL + K NL ++ + I K ++GF +A
Sbjct: 596 RTMKTADTVRTQLSRVMDK--------YNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAH 647
Query: 807 LSKQG-YTNIKQDLSVSVHPSSVIFNRMKQEGKPMKYILYQSLMLTSKEFIRDCITFDKY 865
L + G Y +K + V++HPS+V+ + KP ++ LY +LT+K FIR +T +
Sbjct: 648 LERSGHYVTVKDNQLVNLHPSTVL------DHKP-EWALYNEFVLTTKNFIR-TVTDVRP 699
Query: 866 EWLTETMPHIY 876
EWL + P Y
Sbjct: 700 EWLLQIAPQYY 710
>At3g62310 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 726
Score = 471 bits (1212), Expect = e-132
Identities = 275/665 (41%), Positives = 400/665 (59%), Gaps = 43/665 (6%)
Query: 230 IKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVE--DGYTNDGK--- 284
I E R++LPV+ ++E L ++ +Q LI+VGETGSGKTTQ+PQF+++ D T+D +
Sbjct: 54 ILEKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAETSDKRRKW 113
Query: 285 CVVCTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREF 344
V CTQPRRVAA S++ RVA+EMDV +G+EVGY+IRF+D ++P +T+LKY TDGMLLRE
Sbjct: 114 LVGCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSP-RTVLKYLTDGMLLREA 172
Query: 345 LNDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNATKFSKFFF 404
+ DP L Y I++DEAHERTL+TD+L GLL+ +L++R DL+L++ SAT+ A KF +F
Sbjct: 173 MADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQDYFS 232
Query: 405 DCPIFNVPGRRFPVDIHYTLQPEGNYINAAITTIFQIHTTQKLPGDILVFLTGQEEIESM 464
P+ VPGR PV+I YT +PE +Y+ AAI T+ QIH + PGDILVFLTG+EEIE
Sbjct: 233 GAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP-PGDILVFLTGEEEIEDA 291
Query: 465 QTKLLEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKNC-------RKVVLATNI 517
K+ + + L + P + VVP+Y+ LP Q KIF+P P+ RK+V++TNI
Sbjct: 292 CRKINKEVGNLGDQVGP-IKVVPLYSTLPPAMQQKIFDPAPEPVTEGGPPGRKIVVSTNI 350
Query: 518 AETSLTIDGIKFVVDPGFVKEQSYSG--GVSKLVTVPCSRASVDQRAGRAGRLGPGKCFR 575
AETSLTIDGI +V+DPGF K++ Y+ V L+ P S+AS QR+GRAGR PGKCFR
Sbjct: 351 AETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFR 410
Query: 576 LFTKWSYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALENL 635
L+T+ S+ N+L+ PEI HF +D P L ALE L
Sbjct: 411 LYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVL 470
Query: 636 YAIGALNSRGAITKVGQVMCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESNS 695
+GAL+ G +TK G++M +FP DP+ AK++ S E +C+ EI+++ +ML N
Sbjct: 471 NYLGALDDDGNLTKTGEIMSEFPLDPQMAKMLIVSP-EFNCSN---EILSVSAMLSVPNC 526
Query: 696 IFVP---GLNSEEKTKLFGSLMQSSDHMLYLWIYEQWEENGYSRRWCQDFKLQHKTMKRV 752
P ++E FG + DH+ L +Y +++N WC + + ++ MK
Sbjct: 527 FIRPREAQKAADEAKARFGHI--EGDHLTLLNVYHAFKQNNEDPNWCYENFINNRAMKSA 584
Query: 753 LRIRQQLWKYCRKQDFLLKHDQNLTQLKENMPRSVIEAKIIKCFISGFPTNIAKLSKQG- 811
+RQQL + + NL + I K ++G+ +A L + G
Sbjct: 585 DNVRQQLVRIMSR--------FNLKMCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGH 636
Query: 812 YTNIKQDLSVSVHPSSVIFNRMKQEGKPMKYILYQSLMLTSKEFIRDCITFDKYEWLTET 871
Y +K + V +HPS+ + + KP ++++Y +LTS+ FIR +T + EWL +
Sbjct: 637 YLTVKDNQVVHLHPSNCL------DHKP-EWVIYNEYVLTSRNFIR-TVTDIRGEWLVDV 688
Query: 872 MPHIY 876
H Y
Sbjct: 689 ASHYY 693
>SPBC16H5.10c [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 735
Score = 465 bits (1196), Expect = e-130
Identities = 278/663 (41%), Positives = 391/663 (58%), Gaps = 42/663 (6%)
Query: 230 IKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTN-DGKCVVC 288
I ETR+ LPVYQ R+E L ++QI++ VGETGSGKTTQ+PQF++ D + + C
Sbjct: 68 ILETRRELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDELPHLTNTQIAC 127
Query: 289 TQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLNDP 348
TQPRRVAA S+A RVADEMDV LG+EVGYNIRF+D + P+ T+LKY TDGMLLRE + D
Sbjct: 128 TQPRRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPN-TLLKYMTDGMLLREAMTDH 186
Query: 349 QLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNATKFSKFFFDCPI 408
LS YS I++DEAHERTL+TDIL+GL++ + R DL++I+ SAT++A KF K+FFD P+
Sbjct: 187 MLSRYSCIILDEAHERTLATDILMGLMKRLATRRPDLKIIVMSATLDAKKFQKYFFDAPL 246
Query: 409 FNVPGRRFPVDIHYTLQPEGNYINAAITTIFQIHTTQKLPGDILVFLTGQEEIESMQTKL 468
VPGR +PV+I+YT +PE +Y+ AA+ T+ QIH ++ PGDILVFLTG+EEIE K+
Sbjct: 247 LAVPGRTYPVEIYYTQEPERDYLEAALRTVLQIH-VEEGPGDILVFLTGEEEIEDACRKI 305
Query: 469 -LEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKNC-----RKVVLATNIAETSL 522
LE + L V P+Y +LP QQ +IFEPTP++ RKVV++TNIAETSL
Sbjct: 306 TLEADDLVREGAAGPLKVYPLYGSLPPNQQQRIFEPTPEDTKSGYGRKVVISTNIAETSL 365
Query: 523 TIDGIKFVVDPGFVKEQSYSG--GVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTKW 580
TIDGI +VVDPGF K++ Y+ V L+ P S+AS QRAGRAGR PGKCFRL+T+
Sbjct: 366 TIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEE 425
Query: 581 SYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALENLYAIGA 640
++ EL + PEI HF +D P + ALE L +
Sbjct: 426 AFRKELIEQTYPEILRSNLSSTVLELKKLGIDDLVHFDYMDPPAPETMMRALEELNYLNC 485
Query: 641 LNSRGAITKVGQVMCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESNSIFVPG 700
L+ G +T +G+ +FP DP A ++ S E C+ E++++ ++L N +FV
Sbjct: 486 LDDNGDLTPLGRKASEFPLDPNLAVMLIRSP-EFYCSN---EVLSLTALLSVPN-VFV-- 538
Query: 701 LNSEEKTKLFGSLMQ-----SSDHMLYLWIYEQWEENGYSRRWCQDFKLQHKTMKRVLRI 755
KL + Q DH+ L +Y ++ + WC + L H+ + +
Sbjct: 539 -RPNSARKLADEMRQQFTHPDGDHLTLLNVYHAYKSGEGTADWCWNHFLSHRALISADNV 597
Query: 756 RQQLWKYCRKQDFLLKHDQNLTQLKENMPRSVIEAKIIKCFISGFPTNIAKLSKQG--YT 813
R+QL + +Q+ L + I + +SGF +AK S G Y
Sbjct: 598 RKQLRRTMERQEVEL--------ISTPFDDKNYYVNIRRALVSGFFMQVAKKSANGKNYV 649
Query: 814 NIKQDLSVSVHPSSVIFNRMKQEGKPMKYILYQSLMLTSKEFIRDCITFDKYEWLTETMP 873
+K + VS+HPS + ++++Y +LT+K FIR+ +T + EWL E P
Sbjct: 650 TMKDNQVVSLHPSCGL-------SVTPEWVVYNEFVLTTKSFIRN-VTAIRPEWLIELAP 701
Query: 874 HIY 876
+ Y
Sbjct: 702 NYY 704
>At5g13010 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase
Length = 1226
Score = 464 bits (1194), Expect = e-130
Identities = 280/720 (38%), Positives = 412/720 (56%), Gaps = 58/720 (8%)
Query: 168 MKKSVIKADADEIKVKDSDNYEFVFDPESMIDFTDDTTDILEPVEDGRLAEALEEQINKM 227
++KS + DAD V D +F + + + + EA+ E
Sbjct: 479 IEKSAEQIDADTAVVGDDGEVDFKGEAKF--------------AQHMKKGEAVSE-FAMS 523
Query: 228 KSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDGKCVV 287
K++ E R+ LP++ R E+L IR++Q+++VVGETGSGKTTQL Q DGYT +G V
Sbjct: 524 KTMAEQRQYLPIFSVRDELLQVIRENQVIVVVGETGSGKTTQLTQ----DGYTING-IVG 578
Query: 288 CTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLND 347
CTQPRRVAA S+A RV++EM+ LG ++GY IRF+D T P+ T++KY TDG+LLRE L D
Sbjct: 579 CTQPRRVAAMSVAKRVSEEMETELGDKIGYAIRFEDVTGPN-TVIKYMTDGVLLRETLKD 637
Query: 348 PQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNATKFSKFFFDCP 407
L Y +++DEAHER+L+TD+L G+L+ ++ R+D +LI++SAT+NA KFS FF P
Sbjct: 638 SDLDKYRVVVMDEAHERSLNTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSNFFGSVP 697
Query: 408 IFNVPGRRFPVDIHYTLQPEGNYINAAITTIFQIHTTQKLPGDILVFLTGQEEIESMQTK 467
IFN+PGR FPV+I Y+ P +Y+ AA+ IH T PGDIL+F+TGQ+EIE+
Sbjct: 698 IFNIPGRTFPVNILYSKTPCEDYVEAAVKQAMTIHITSP-PGDILIFMTGQDEIEAACFS 756
Query: 468 LLEILSKL---DNTKFPDLLVVPIYANLPQEQQSKIFEPTPKNCRKVVLATNIAETSLTI 524
L E + +L + + +LL++PIY+ LP + Q+KIF+ RK ++ATNIAETSLT+
Sbjct: 757 LKERMEQLVSSSSREITNLLILPIYSQLPADLQAKIFQKPEDGARKCIVATNIAETSLTV 816
Query: 525 DGIKFVVDPGFVKEQSYSG--GVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTKWSY 582
DGI +V+D G+ K + ++ G+ L P SRA+ DQRAGRAGR GPG C+RL+T+ +Y
Sbjct: 817 DGIYYVIDTGYGKMKVFNPRMGMDALQVFPISRAASDQRAGRAGRTGPGTCYRLYTESAY 876
Query: 583 YNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALENLYAIGALN 642
NE+ P PEI F +D P + ++ L+ +GALN
Sbjct: 877 LNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGALN 936
Query: 643 SRGAITKVGQVMCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESNSIFVPGLN 702
+ G +T +G M +FP DP AK++ + + E++TIVSML + F P
Sbjct: 937 NVGGLTDLGWKMVEFPLDPPLAKMLLMGERLD----CIDEVLTIVSMLSVPSVFFRPKER 992
Query: 703 SEE----KTKLFGSLMQSSDHMLYLWIYEQWEENGYSRRWCQDFKLQHKTMKRVLRIRQQ 758
+EE + K F + SDH+ L +Y+QW+E+ Y WC D LQ K +++ +R Q
Sbjct: 993 AEESDAAREKFF---VPESDHLTLLNVYQQWKEHDYRGDWCNDHYLQVKGLRKAREVRSQ 1049
Query: 759 LWKYCRKQDFLLKHDQNLTQLKENMPRSVIEAKII-KCFISGFPTNIAKLSKQG-YTNIK 816
L L QLK + + I+ K S + N A+L G Y N +
Sbjct: 1050 LLDI-------------LKQLKIELRSCGPDWDIVRKAICSAYFHNSARLKGVGEYVNCR 1096
Query: 817 QDLSVSVHPSSVIFNRMKQEGKPMKYILYQSLMLTSKEFIRDCITFDKYEWLTETMPHIY 876
+ +HPSS ++ G Y++Y L+LT+KE+++ C T + WL E P +
Sbjct: 1097 TGMPCHLHPSSALYGL----GYTPDYVVYHELILTTKEYMQ-CATSVEPHWLAELGPMFF 1151
>At2g47250 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 729
Score = 463 bits (1192), Expect = e-130
Identities = 273/665 (41%), Positives = 397/665 (59%), Gaps = 43/665 (6%)
Query: 230 IKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVE----DGYTNDGKC 285
I E R+ LPV+ + + L+++ +Q LI+VGETGSGKTTQ+PQF+++ D K
Sbjct: 58 ILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKW 117
Query: 286 VV-CTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREF 344
+V CTQPRRVAA S++ RVADEMDV +G+EVGY+IRF+D T+ +T+LKY TDGMLLRE
Sbjct: 118 LVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTS-SRTMLKYLTDGMLLREA 176
Query: 345 LNDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNATKFSKFFF 404
+ DP L Y I++DEAHERTL+TD+L GLL+ +L++R DL+L++ SAT+ A KF ++F
Sbjct: 177 MADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFS 236
Query: 405 DCPIFNVPGRRFPVDIHYTLQPEGNYINAAITTIFQIHTTQKLPGDILVFLTGQEEIESM 464
P+ VPGR PV+I YT +PE +Y+ AAI T+ QIH + PGDILVFLTG+EEIE
Sbjct: 237 GAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP-PGDILVFLTGEEEIEDA 295
Query: 465 QTKLLEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKNC-------RKVVLATNI 517
K+ + +S L + P + VVP+Y+ LP Q KIF+P P RK+V++TNI
Sbjct: 296 CRKINKEVSNLGDQVGP-VKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNI 354
Query: 518 AETSLTIDGIKFVVDPGFVKEQSYSG--GVSKLVTVPCSRASVDQRAGRAGRLGPGKCFR 575
AETSLTIDGI +V+DPGF K++ Y+ V L+ P S+AS QR+GRAGR PGKCFR
Sbjct: 355 AETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFR 414
Query: 576 LFTKWSYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALENL 635
L+T+ S+ N+L+ PEI HF +D P L ALE L
Sbjct: 415 LYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVL 474
Query: 636 YAIGALNSRGAITKVGQVMCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESNS 695
+GAL+ G +TK G++M +FP DP+ +K++ S E +C+ EI+++ +ML N
Sbjct: 475 NYLGALDDEGNLTKTGEIMSEFPLDPQMSKMLIVSP-EFNCSN---EILSVSAMLSVPNC 530
Query: 696 IFVP---GLNSEEKTKLFGSLMQSSDHMLYLWIYEQWEENGYSRRWCQDFKLQHKTMKRV 752
P ++E FG + DH+ L +Y +++N WC + + ++ MK
Sbjct: 531 FVRPREAQKAADEAKARFGHI--DGDHLTLLNVYHAYKQNNEDPNWCFENFVNNRAMKSA 588
Query: 753 LRIRQQLWKYCRKQDFLLKHDQNLTQLKENMPRSVIEAKIIKCFISGFPTNIAKLSKQG- 811
+RQQL + + NL + I K ++G+ +A L + G
Sbjct: 589 DNVRQQLVRIMSR--------FNLKMCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGH 640
Query: 812 YTNIKQDLSVSVHPSSVIFNRMKQEGKPMKYILYQSLMLTSKEFIRDCITFDKYEWLTET 871
Y +K + V +HPS+ + + KP ++++Y +LT++ FIR +T + EWL +
Sbjct: 641 YLTVKDNQVVHLHPSNCL------DHKP-EWVIYNEYVLTTRNFIR-TVTDIRGEWLVDV 692
Query: 872 MPHIY 876
H Y
Sbjct: 693 AQHYY 697
>YKR086w [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase
Length = 1071
Score = 463 bits (1191), Expect = e-130
Identities = 272/659 (41%), Positives = 390/659 (58%), Gaps = 42/659 (6%)
Query: 230 IKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTND-GKCVVC 288
IK T++ LPV++ R ++L IR++Q+++++GETGSGKTTQL Q+L E+GY ND GK +V
Sbjct: 343 IKHTKEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGKSIVV 402
Query: 289 TQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLNDP 348
TQPRRVAA S+A RVA EM V LGKEVGY+IRF+D T + T LK+ TDG+LLRE L D
Sbjct: 403 TQPRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDD 462
Query: 349 QLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNATKFSKFFFDCPI 408
L YS ++IDEAHER+L+TDILLG + +L R+DL+LII+SATMNA KFS FF + P
Sbjct: 463 TLDKYSCVIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSATMNAKKFSAFFGNAPQ 522
Query: 409 FNVPGRRFPVDIHYTLQPEGNYINAAITTIFQIHTTQKL-PGDILVFLTGQEEIE----S 463
F +PGR FPV YT P +Y+ AA++ +IH GDIL+F+TGQE+IE +
Sbjct: 523 FTIPGRTFPVQTIYTSNPVQDYVEAAVSQAVKIHLANDCSSGDILIFMTGQEDIETTFDT 582
Query: 464 MQTKLLEILSKLDNT----KFPDLLVVPIYANLPQEQQSKIFEPTPKNCRKVVLATNIAE 519
+Q K L++ SK T + D+ ++PIY+ LP + Q KIF+ RK+++ATNIAE
Sbjct: 583 LQEKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQDLHGTKRKIIIATNIAE 642
Query: 520 TSLTIDGIKFVVDPGFVKEQSYSG--GVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLF 577
TSLTI GI++V+D G+ K + Y+ G+ LV P S+A+ DQR+GRAGR PG +RL+
Sbjct: 643 TSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRAGRTAPGTAYRLY 702
Query: 578 TKWSYYNELEKVPKPEI-XXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALENLY 636
T+ ++ ++ PEI FP +DKP +L L+
Sbjct: 703 TEDTFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVTDELSKFPFIDKPPLQTFLSSLYELW 762
Query: 637 AIGALNSRGAITKVGQVMCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESNSI 696
IGA+++ G +T +G M FP P +K++ +V NG E++TIVSML
Sbjct: 763 FIGAIDTSGQLTPLGLQMAKFPLQPSLSKILLIAV----RNGCSDEMLTIVSMLSVPQVF 818
Query: 697 FVPGLNSEE----KTKLFGSLMQSSDHMLYLWIYEQWEENGYSRRWCQDFKLQHKTMKRV 752
+ P +E + K F + SDH+ L ++EQW N +S WC +Q+K++ R
Sbjct: 819 YRPKERQKEADIARNKFF---IAKSDHLTLLNVFEQWRANNFSSHWCNKHFVQYKSLVRA 875
Query: 753 LRIRQQLWKYCRKQDFLLKHDQNLTQLKENMPRSVIEAKIIKCFISGFPTNIAKLS-KQG 811
IR QL + Q + + +I+ KC SGF AK++ +
Sbjct: 876 RDIRDQL--------LTILKSQKIPVISSGKDWDIIK----KCICSGFAHQAAKITGLRN 923
Query: 812 YTNIKQDLSVSVHPSSVIFNRMKQEGKPMKYILYQSLMLTSKEFIRDCITFDKYEWLTE 870
Y ++K +SV +HP+S + G Y++Y L++TSKE+I C+T WL E
Sbjct: 924 YVHLKTGVSVQLHPTSALHGL----GDLPPYVVYHELLMTSKEYI-CCVTSVDPFWLME 977
>Hs4557517 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 813
Score = 462 bits (1189), Expect = e-129
Identities = 267/662 (40%), Positives = 394/662 (59%), Gaps = 40/662 (6%)
Query: 230 IKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDG--KCVV 287
I + R LPV++Y+ D + +HQ ++VGETGSGKTTQ+P VE + G + V
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILGRHQSFVLVGETGSGKTTQIPHRCVEYMRSLPGPKRGVA 189
Query: 288 CTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLND 347
CTQPRRVAA S+A RVADEMDV+LG+EVGY+IRF+D ++ KT Y TDGMLLRE +ND
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSA-KTFFMYMTDGMLLREAMND 248
Query: 348 PQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNATKFSKFFFDCP 407
P L Y I++DEAHERTL+TDIL+G+L+ +++ R DL++I+ SAT++A KF +F +CP
Sbjct: 249 PLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCP 308
Query: 408 IFNVPGRRFPVDIHYTLQPEGNYINAAITTIFQIHTTQKLPGDILVFLTGQEEIESMQTK 467
+ +PGR PV+I YT +PE +Y+ AAI T+ QIH ++ GD+L+FLTGQEEI+ +
Sbjct: 309 LLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKR 368
Query: 468 LLEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKN------CRKVVLATNIAETS 521
+ + L + D+ ++P+Y+ LP +QQ +IFEP P RKVV++TNIAETS
Sbjct: 369 IKREVDDL-GPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETS 427
Query: 522 LTIDGIKFVVDPGFVKEQSYSG--GVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTK 579
LTIDG+ FV+DPGF K++ Y+ V L+ S+AS QRAGRAGR PGKCFRL+T+
Sbjct: 428 LTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTE 487
Query: 580 WSYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALENLYAIG 639
+Y E++ PEI HF +D P L ALE L +
Sbjct: 488 KAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLA 547
Query: 640 ALNSRGAITKVGQVMCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESNSIFVP 699
ALN G +T++G +M +FP DP+ AK++ +S + +C+ E+++I +ML P
Sbjct: 548 ALNDDGDLTELGSMMAEFPLDPQLAKMVIASC-DYNCSN---EVLSITAMLSVPQCFVRP 603
Query: 700 GLNSEEKTKLFGSLMQ----SSDHMLYLWIYEQWEENGYSRRWCQDFKLQHKTMKRVLRI 755
+E K + M+ DH+ L +Y +++N S +WC D + ++++ +
Sbjct: 604 ---TEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNV 660
Query: 756 RQQLWKYCRKQDFLLKHDQNLTQLKENMPRSVIEAKIIKCFISGFPTNIAKLSKQG-YTN 814
RQQL + + NL + + I K ++G+ +A L + G Y
Sbjct: 661 RQQLSR--------IMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLT 712
Query: 815 IKQDLSVSVHPSSVIFNRMKQEGKPMKYILYQSLMLTSKEFIRDCITFDKYEWLTETMPH 874
+K + V +HPS+V+ + KP +++LY +LT+K +IR C T K EWL + P
Sbjct: 713 VKDNQVVQLHPSTVL------DHKP-EWVLYNEFVLTTKNYIRTC-TDIKPEWLVKIAPQ 764
Query: 875 IY 876
Y
Sbjct: 765 YY 766
>7304234 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 729
Score = 462 bits (1189), Expect = e-129
Identities = 263/663 (39%), Positives = 395/663 (58%), Gaps = 36/663 (5%)
Query: 226 KMKSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDGKC 285
+ +++ + R +LPV++Y+ + + + HQ +++VGETGSGKTTQ+PQ+ V+ + K
Sbjct: 61 RYQNLYKKRIALPVFEYQADFMRLLSLHQCIVLVGETGSGKTTQIPQWCVDFAVSKGRKG 120
Query: 286 VVCTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFL 345
V CTQPRRVAA S+A RV++EMDV LG+EVGY+IRF+D +T KT+LKY TDGMLLRE +
Sbjct: 121 VSCTQPRRVAAMSVAQRVSEEMDVKLGEEVGYSIRFEDCSTA-KTLLKYMTDGMLLREAM 179
Query: 346 NDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNATKFSKFFFD 405
+DP L Y I++DEAHERTL+TDIL+G+L+ +++ R DL+L++ SAT++A KF ++F +
Sbjct: 180 SDPMLDQYQVILLDEAHERTLATDILMGVLKEVIRQRSDLKLVVMSATLDAGKFQQYFDN 239
Query: 406 CPIFNVPGRRFPVDIHYTLQPEGNYINAAITTIFQIHTTQKLPGDILVFLTGQEEIESMQ 465
P+ VPGR PV+I YT +PE +Y+ AAI T+ QIH +++ GDIL+FLTGQEEIE
Sbjct: 240 APLMKVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEIEGDILMFLTGQEEIEEAC 299
Query: 466 TKLLEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKN------CRKVVLATNIAE 519
++ + L ++ +L +P+Y+ LP Q +IFEP P RKVV++TNIAE
Sbjct: 300 KRIKREIDNL-GSEIGELKCIPLYSTLPPNLQQRIFEPAPPPNANGAIGRKVVVSTNIAE 358
Query: 520 TSLTIDGIKFVVDPGFVKEQSYSG--GVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLF 577
TSLTIDG+ FV+DPGF K++ Y+ V L+ P S+AS QR+GRAGR PGKCFRL+
Sbjct: 359 TSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRSGRAGRTRPGKCFRLY 418
Query: 578 TKWSYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALENLYA 637
T+ ++ NE++ PEI HF +D P L ALE L
Sbjct: 419 TEKAFKNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNY 478
Query: 638 IGALNSRGAITKVGQVMCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESNSIF 697
+ AL+ G +T +G VM +FP DP+ AK++ +S + +C+ EI++I +ML
Sbjct: 479 LAALDDDGNLTDLGAVMSEFPLDPQLAKMLIASC-QHNCSN---EILSITAMLSVPQCFV 534
Query: 698 VPG---LNSEEKTKLFGSLMQSSDHMLYLWIYEQWEENGYSRRWCQDFKLQHKTMKRVLR 754
P ++E F + DH+ L +Y ++++ WC + + +++K
Sbjct: 535 RPNEAKKAADEAKMRFAHI--DGDHLTLLNVYHAFKQSSEDPNWCYENFINFRSLKSADN 592
Query: 755 IRQQLWKYCRKQDFLLKHDQNLTQLKENMPRSVIEAKIIKCFISGFPTNIAKLSKQG-YT 813
+RQQL + + NL + I K + GF +A L + G Y
Sbjct: 593 VRQQLAR--------IMDRFNLRRTSTEFTSKDYYVNIRKALVQGFFMQVAHLERTGYYL 644
Query: 814 NIKQDLSVSVHPSSVIFNRMKQEGKPMKYILYQSLMLTSKEFIRDCITFDKYEWLTETMP 873
IK + +V +HPS+ + + KP +++Y +LT+K +IR +T K EWL P
Sbjct: 645 TIKDNQNVQLHPSTCL------DHKP-DWVIYNEFVLTTKNYIR-TVTDVKPEWLCCLAP 696
Query: 874 HIY 876
Y
Sbjct: 697 QYY 699
>YGL120c [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 767
Score = 456 bits (1174), Expect = e-128
Identities = 278/687 (40%), Positives = 406/687 (58%), Gaps = 43/687 (6%)
Query: 209 EPVEDGRLAEALEEQIN-KMKSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKT 267
+ +EDG++ + K I + R+ LPV+ R E L + +QI++ VGETGSGKT
Sbjct: 64 QKLEDGKINPFTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKT 123
Query: 268 TQLPQFLVEDGYTN-DGKCVVCTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTT 326
TQ+PQF++ D + + V CTQPRRVAA S+A RVA+EMDV LG+EVGY+IRF+++T+
Sbjct: 124 TQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTS 183
Query: 327 PDKTILKYTTDGMLLREFLNDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLR 386
+KTILKY TDGMLLRE + D LS YS I++DEAHERTL+TDIL+GLL+ +++ R DL+
Sbjct: 184 -NKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLK 242
Query: 387 LIISSATMNATKFSKFFFDCPIFNVPGRRFPVDIHYTLQPEGNYINAAITTIFQIHTTQK 446
+II SAT++A KF ++F D P+ VPGR +PV+++YT + + +Y+++AI T+ QIH T++
Sbjct: 243 IIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEE 302
Query: 447 LPGDILVFLTGQEEIESMQTKL-LEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTP 505
GDIL+FLTG++EIE K+ LE + L V P+Y +LP QQ +IFEP P
Sbjct: 303 -AGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAP 361
Query: 506 KN-----CRKVVLATNIAETSLTIDGIKFVVDPGFVKEQSYSG--GVSKLVTVPCSRASV 558
++ RKVV++TNIAETSLTIDGI +VVDPGF K++ Y+ V L+ P S+AS
Sbjct: 362 ESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASA 421
Query: 559 DQRAGRAGRLGPGKCFRLFTKWSYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHFP 618
QRAGRAGR PGKCFRL+T+ ++ EL + PEI HF
Sbjct: 422 QQRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFD 481
Query: 619 MLDKPKTIQLSEALENLYAIGALNSRGAITKVGQVMCDFPCDPEYAKVIYSSVFEESCNG 678
+D P + ALE L + L+ G +T +G++ FP DP A ++ S FE C+
Sbjct: 482 FMDPPAPETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGS-FEFQCS- 539
Query: 679 VLPEIVTIVSMLQESNSIFVPGLN---SEEKTKLFGSLMQSSDHMLYLWIYEQWE-ENGY 734
EI+TIV+ML N P + +++ +F DH+ L +Y ++ + Y
Sbjct: 540 --QEILTIVAMLSVPNVFIRPTKDKKRADDAKNIFAH--PDGDHITLLNVYHAFKSDEAY 595
Query: 735 S---RRWCQDFKLQHKTMKRVLRIRQQLWKYCRKQDFLLKHDQNLTQLKENMPRSVIEAK 791
+WC+D L ++++ IR QL + + +++ L P+
Sbjct: 596 EYGIHKWCRDHYLNYRSLSAADNIRSQL------ERLMNRYNLELNTTDYESPKYF--DN 647
Query: 792 IIKCFISGFPTNIAK--LSKQGYTNIKQDLSVSVHPSSVIFNRMKQEGKPMKYILYQSLM 849
I K SGF +AK +GY +K + V +HPS+V+ G ++++Y +
Sbjct: 648 IRKALASGFFMQVAKKRSGAKGYITVKDNQDVLIHPSTVL-------GHDAEWVIYNEFV 700
Query: 850 LTSKEFIRDCITFDKYEWLTETMPHIY 876
LTSK +IR +T + EWL E P Y
Sbjct: 701 LTSKNYIR-TVTSVRPEWLIEIAPAYY 726
>SPBC19C2.01 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 739
Score = 451 bits (1159), Expect = e-126
Identities = 260/558 (46%), Positives = 358/558 (63%), Gaps = 39/558 (6%)
Query: 23 TYESIESVNANTNSFSPADQVLDSSPDPSLKDGKAHYSVNSIKSMVEQKVLTKRQRSQLH 82
T E +E ++ +S A + L P+ K + ++ Q+ L R + QL
Sbjct: 200 TNEFVEDYSSKFSSEELALRKLADDPESWRK------LASELRKKSRQQYLKPRAQQQLE 253
Query: 83 WLVKDLQILEDDIKRYGWNNLTVSEREEISLKRELLKLLNETGK------------DYAE 130
L ++++ D+ + + LT +E E+ K+ELL++ E + DY
Sbjct: 254 ILRREIR---DEEQLFAGEKLTQAEIRELEKKKELLRIAEERQRLEKQATEYQMPEDYFT 310
Query: 131 NGDTSGFKMQDEVA------SKKQLLTAKLRNKTDRVNWEEEQMKKSVIKADADEIKVKD 184
K ++EV S + ++ WE +Q+ K+++ D +E
Sbjct: 311 EQGKLDRKRKEEVLYQRYKDSNEGEQNEVTMGAAEQQRWEAQQINKALL-FDQNEWLPPG 369
Query: 185 SDNYEFVFDPESMIDFTDDTTDILE-PVEDGRLAEALEEQINKMKSIKETRKSLPVYQYR 243
++FVFD IDF DT E PV+ ++ + E KS++ +RKSLPVYQY+
Sbjct: 370 EKQFDFVFDESQQIDFLLDTKLSAENPVDTDKMTDVKVE-----KSLESSRKSLPVYQYK 424
Query: 244 QEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDGKCVVCTQPRRVAATSIASRV 303
++L +I ++Q+L++V ETGSGKTTQLPQFL E GYT K + CTQPRRVAA S+A+RV
Sbjct: 425 DDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKGNKKICCTQPRRVAAMSVAARV 484
Query: 304 ADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLNDPQLSSYSAIMIDEAHE 363
A EMDV LG+EVGY+IRF++ T+ +KT++KY TDGMLLREFL +P L+SYS I+IDEAHE
Sbjct: 485 AKEMDVRLGQEVGYSIRFENATS-EKTVIKYLTDGMLLREFLTEPDLASYSVIIIDEAHE 543
Query: 364 RTLSTDILLGLLRGILQDRKDLRLIISSATMNATKFSKFFFDCPIFNVPGRRFPVDIHYT 423
RTL TDIL GL++ I + R DL+++ISSAT++A KFS +F + P+F VPGRR+PVDI+YT
Sbjct: 544 RTLHTDILFGLVKDIARFRPDLKVLISSATIDAEKFSAYFDEAPVFYVPGRRYPVDIYYT 603
Query: 424 LQPEGNYINAAITTIFQIHTTQKLPGDILVFLTGQEEIESMQTKLLEILSKLDNTKFPDL 483
QPE NYI AAITTI QIHTTQ GDILVFLTGQ+EIE M + E L ++ + P++
Sbjct: 604 PQPEANYIQAAITTILQIHTTQP-AGDILVFLTGQDEIELMSENMQE-LCRILGKRIPEI 661
Query: 484 LVVPIYANLPQEQQSKIFEPTPKNCRKVVLATNIAETSLTIDGIKFVVDPGFVKEQSYS- 542
++ PIYANLP E Q+KIF+PTP RKVVLATNIAETS+TIDG+ FV+D GFVK+ Y+
Sbjct: 662 ILCPIYANLPSELQAKIFDPTPPGARKVVLATNIAETSITIDGVNFVIDSGFVKQNMYNP 721
Query: 543 -GGVSKLVTVPCSRASVD 559
G+ LV+VPCSRAS D
Sbjct: 722 RTGMESLVSVPCSRASAD 739
>SPAC2G11.11c [A] KOG0922 DEAH-box RNA helicase
Length = 719
Score = 450 bits (1157), Expect = e-126
Identities = 269/689 (39%), Positives = 404/689 (58%), Gaps = 37/689 (5%)
Query: 196 SMIDFTDDTTDI----LEPVEDGRLAEALEEQINKMKSIKETRKSLPVYQYRQEILDSIR 251
S+++F + TD + ++ + E +K K I E RK+LP+++ + I+
Sbjct: 51 SVVNFLEQDTDFGANEVVGSDNSSPEKRSENSPSKRKDILEQRKNLPIWEAHDTLCQQIQ 110
Query: 252 QHQILIVVGETGSGKTTQLPQFLVEDGYTNDGKCVVCTQPRRVAATSIASRVADEMDVIL 311
+++++VVGETGSGK+TQ+PQFL E Y +G CV TQPRRVAA ++A RVA E L
Sbjct: 111 DNRVIVVVGETGSGKSTQIPQFLNECPYAQEG-CVAITQPRRVAAVNLAKRVAAEQGCRL 169
Query: 312 GKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLNDPQLSSYSAIMIDEAHERTLSTDIL 371
G++VGY+IRFDD TT KT +KY TDGMLLRE +NDP LS Y +++DEAHERTL TD+L
Sbjct: 170 GEQVGYSIRFDD-TTSKKTRIKYLTDGMLLRELINDPILSQYHTLILDEAHERTLMTDML 228
Query: 372 LGLLRGILQDRKDLRLIISSATMNATKFSKFFFDCPIFNVPGRRFPVDIHYTLQPEGNYI 431
LG ++ I++ R LR+II SAT+NA +FS+FF I + GR++PV IHYT PE +Y+
Sbjct: 229 LGFVKKIIKKRPALRVIIMSATLNAERFSEFFDGAEICYISGRQYPVQIHYTYTPEPDYL 288
Query: 432 NAAITTIFQIHTTQKLPGDILVFLTGQEEIESMQTKLLEILSKLDNTKFPDLLVVPIYAN 491
+A + TIFQ+H T+ PGDILVFLTGQ+EIE+++ L++ SK + P + P++A+
Sbjct: 289 DACLRTIFQLH-TKLPPGDILVFLTGQDEIEALEA-LIKSYSKQLPSNLPQIQACPLFAS 346
Query: 492 LPQEQQSKIFEPTPKNCRKVVLATNIAETSLTIDGIKFVVDPGFVKEQSYSG--GVSKLV 549
LPQEQQ ++F P N RKVVL+TNIAETS+TI GI++V+D G K + ++ G+ L
Sbjct: 347 LPQEQQLQVFLPALANHRKVVLSTNIAETSVTISGIRYVIDTGLAKIKQFNSKLGLESLT 406
Query: 550 TVPCSRASVDQRAGRAGRLGPGKCFRLFTKWSYYNELEKVPKPEIXXXXXXXXXXXXXXX 609
P S+++ QR+GRAGR G+C+R++T+ + +++L K PEI
Sbjct: 407 VQPISQSAAMQRSGRAGREAAGQCYRIYTE-ADFDKLPKETIPEIKRIDLSQAVLTLKAR 465
Query: 610 XXXXXXHFPMLDKPKTIQLSEALENLYAIGALNSRGAITKVGQVMCDFPCDPEYAKVIYS 669
+F +D P L ALE+LY+IGAL+ G I +G M P P A+ + +
Sbjct: 466 GQNDVINFHYMDPPSKEGLLRALEHLYSIGALDDNGHINDLGYQMSLIPLLPSLARAVLA 525
Query: 670 SVFEESCNGVLPEIVTIVSMLQESNSIFVPGLNSEEKTKLFGSLMQS-SDHMLYLWIYEQ 728
+ E +C L E++ +VS L + P +E + + S D + L Q
Sbjct: 526 A-REHNC---LSEVIDVVSCLSTDSMFLFPQEKRDEAIEARLKFLHSEGDLLTCLNALRQ 581
Query: 729 WEENGYSRR--WCQDFKLQHKTMKRVLRIRQQLWKYCRKQDFLLKHDQNLTQLKENMPRS 786
+ E+ + R WC + + +K +L IR+QL ++C K + L N
Sbjct: 582 YLESSHDSRKQWCSQNFINRRALKTILDIRKQLREHCLKDGWEL-----------NSSPE 630
Query: 787 VIEAKIIKCFISGFPTNIAKLSKQG-YTNIKQDLSVSVHPSSVIFNRMKQEGKPMKYILY 845
V ++ F+SG+ TN A L G Y I + ++S+HPSS +F GK ++ I+Y
Sbjct: 631 VNSENLLLSFLSGYITNTALLHPDGSYRTIIGNQTISIHPSSSLF------GKKVEAIMY 684
Query: 846 QSLMLTSKEFIRDCITFDKYEWLTETMPH 874
L+ T+K ++R ++ + WL PH
Sbjct: 685 HELVFTTKSYVRG-VSSIRSNWLNAVAPH 712
>Hs20544129 [A] KOG0922 DEAH-box RNA helicase
Length = 703
Score = 446 bits (1148), Expect = e-125
Identities = 262/668 (39%), Positives = 388/668 (57%), Gaps = 46/668 (6%)
Query: 229 SIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDGKCVVC 288
SI++ R+ LPV++ R IL I +Q +++VGETG GK+TQ+PQ+L E G+T +G+ V
Sbjct: 46 SIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGV 105
Query: 289 TQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLNDP 348
TQPRRVAA ++A RVA+E +LG EVGY IRFDD T T +K+ TDGML+RE + DP
Sbjct: 106 TQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDP 165
Query: 349 QLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNATKFSKFFFD--- 405
L+ YS IM+DEAHERTL TDI +GLL+ I + R DLRLI++SAT++A KF FF
Sbjct: 166 LLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNET 225
Query: 406 -------CPIFNVPGRRFPVDIHYTLQPEGNYINAAITTIFQIHTTQKLPGDILVFLTGQ 458
C I V GR FPVDI Y P +YI + + T+ +IH T+ GD+L FLTGQ
Sbjct: 226 SDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEG-DGDVLAFLTGQ 284
Query: 459 EEIESMQTKLLEILSKLDNTKFP-DLLVVPIYANLPQEQQSKIFEPTPKNCRKVVLATNI 517
EE+E++ + L+E L T L V+P+YA LP +Q K+FE ++ RKV++ATN+
Sbjct: 285 EEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNV 344
Query: 518 AETSLTIDGIKFVVDPGFVKEQSYS--GGVSKLVTVPCSRASVDQRAGRAGRLGPGKCFR 575
AETS+TI GI +V+D GFVK ++Y+ + LV VP S+AS +QRAGR GR GKC+R
Sbjct: 345 AETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYR 404
Query: 576 LFTKWSYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALENL 635
L+T+ +++L + PE+ F + P + +ALE L
Sbjct: 405 LYTE-EAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELL 463
Query: 636 YAIGALNSRGAITK-VGQVMCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESN 694
YA+G L+ +T+ +G + +FP +P +AK++ E G EI++I +M+Q N
Sbjct: 464 YALGGLDKDCRLTEPLGMRIAEFPLNPMFAKML----LESGNFGCSQEILSIAAMMQIQN 519
Query: 695 SIFVPGLNSEEKTKLFGSL-MQSSDHMLYLWIYEQWEENGYSRRWCQDFKLQHKTMKRVL 753
VP ++ ++ DH+ L IYE + ++ +WCQ+ L +K + R
Sbjct: 520 IFVVPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAA 579
Query: 754 RIRQQLWKYCRKQDFLLKHDQNLTQLKENMPRSVIEAK---IIKCFISGFPTNIAKLSKQ 810
+R+QL K +K +PR E +++C +SGF N A+
Sbjct: 580 TVREQLKKLL---------------VKFQVPRKSSEGDPDLVLRCIVSGFFANAARFHST 624
Query: 811 G-YTNIKQDLSVSVHPSSVIFNRMKQEGKPMKYILYQSLMLTSKEFIRDCITFDKYEWLT 869
G Y I+ D + +HP+SV++ KP ++++Y ++ TSK ++RD +T + WL
Sbjct: 625 GAYRTIRDDHELHIHPASVLYAE-----KPPRWVIYNEVIQTSKYYMRD-VTAIESAWLL 678
Query: 870 ETMPHIYK 877
E PH Y+
Sbjct: 679 ELAPHFYQ 686
>CE27311 [A] KOG0922 DEAH-box RNA helicase
Length = 732
Score = 420 bits (1079), Expect = e-117
Identities = 264/687 (38%), Positives = 388/687 (56%), Gaps = 47/687 (6%)
Query: 212 EDGRLAEALEEQINKMKS------IKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSG 265
E+ A +EEQ+ + I++ R LP+++ R IL +++ +I+VGETG G
Sbjct: 46 ENAGAAPPIEEQLKVHNNPYASLNIQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCG 105
Query: 266 KTTQLPQFLVEDGYTNDGKCVVCTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRT 325
K+TQ+PQFL+E G+ DG+ +V TQPRRVA ++A+RVA+E D ILG +VGY +RFDD +
Sbjct: 106 KSTQVPQFLLEAGWAADGRQIVITQPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVS 165
Query: 326 TPDKTILKYTTDGMLLREFLNDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDL 385
D T +K+ TDG+LLRE L DP LS YS IMIDEAHER+ +TDILLGLLR I+Q R DL
Sbjct: 166 DKD-TKVKFMTDGLLLREILADPLLSKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDL 224
Query: 386 RLIISSATMNATKFSKFF----------FDCPIFNVPGRRFPVDIHYTLQPEGNYINAAI 435
R+I+SSAT++A F FF I +V GR PV +H+T +Y +A+
Sbjct: 225 RIIVSSATLDAELFKDFFEMNETGNSDKDTAGIISVEGRTHPVAVHHTKTSVPDYCQSAV 284
Query: 436 TTIFQIHTTQKLPGDILVFLTGQEEIESMQTKLLEILSKLDNTKFPDLLVVPIYANLPQE 495
T+ IH + PGDILVFLTGQ+E+E + KL E+ L N L VVP Y LP
Sbjct: 285 DTVINIHKHEN-PGDILVFLTGQDEVEDVCEKLRELAGNLKNC--DRLWVVPCYGALPAR 341
Query: 496 QQSKIFEPTPKNCRKVVLATNIAETSLTIDGIKFVVDPGFVK--EQSYSGGVSKLVTVPC 553
+Q K F+ TP RKVV+ATNIAE S+TI GI +V+D G+VK Q + GV L+ V
Sbjct: 342 EQMKAFDSTPHGTRKVVVATNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTV 401
Query: 554 SRASVDQRAGRAGRLGPGKCFRLFTKWSYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXX 613
S+AS +QRAGRAGR+ PGKC+RL+ + S + + PEI
Sbjct: 402 SKASAEQRAGRAGRIRPGKCYRLYPE-SEFERFAEGTVPEIQRCQMASTILQLKALGVQN 460
Query: 614 XXHFPMLDKPKTIQLSEALENLYAIGALNSRGAITK-VGQVMCDFPCDPEYAKVIYSSVF 672
F L P + + LE LYA+GA++ +T +G M +FP P ++K + S
Sbjct: 461 VHRFHYLSPPPSWAMINGLELLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSA- 519
Query: 673 EESCNGVLPEIVTIVSMLQESNSIFVPGLNSEEKTKLFGSL-MQSSDHMLYLWIYEQWEE 731
E C+ E+VTIV+M+Q + P + + ++ DHM L ++ ++ E
Sbjct: 520 EFGCS---TEMVTIVAMMQIQDVFITPYRQRHQADVIRKKFAVEEGDHMTMLNVFTKFVE 576
Query: 732 NGYSRRWCQDFKLQHKTMKRVLRIRQQLWKYCRKQDFLLKHDQNLTQLKENMPRSVIEAK 791
NG S++WC D + ++ + R +R QL + ++ + + L EN
Sbjct: 577 NGRSKKWCSDHFVNYRGLMRADNVRSQLVRLLKRFEIEKVSSRGLINCSEN--------- 627
Query: 792 IIKCFISGFPTNIAKLSKQG-YTNIKQDLSVSVHPSSVIFNRMKQEGKPMKYILYQSLML 850
I +C ++GF + A+ G Y +K+ +++ S I M ++ P K++++ +M
Sbjct: 628 IRQCLVTGFFSQAAQYHYTGKYMTVKESFPFNMYKGSSI---MFKKDYP-KWVIFTEVM- 682
Query: 851 TSKEFIRDCITFDKYEWLTETMPHIYK 877
++ IRD +T + EWL E PH Y+
Sbjct: 683 --QDSIRD-VTVIEPEWLYELAPHYYE 706
>At1g27900 [A] KOG0922 DEAH-box RNA helicase
Length = 708
Score = 409 bits (1050), Expect = e-113
Identities = 236/650 (36%), Positives = 376/650 (57%), Gaps = 34/650 (5%)
Query: 236 SLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDGKCVVCTQPRRVA 295
+LP+ Q+ ++I++++ ++ +++++GETGSGK+TQL Q L GYT G + TQPRRVA
Sbjct: 3 NLPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSG-VIAITQPRRVA 61
Query: 296 ATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLNDPQLSSYSA 355
A S+A RVA E+DV LG++VGY IRF+DRTT KT +KY TDG+LLRE L++P L YS
Sbjct: 62 AVSVARRVAQELDVPLGEDVGYAIRFEDRTT-SKTRIKYLTDGVLLRESLSNPMLDDYSV 120
Query: 356 IMIDEAHERTLSTDILLGLLRGILQDR-KDLRLIISSATMNATKFSKFFFDCPIFNVPGR 414
I++DEAHER+L+TDILLGL++ +++ R + +++I+SAT++ K S+FF CP+ NVPG+
Sbjct: 121 IILDEAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNVPGK 180
Query: 415 RFPVDIHYTLQPEGNYINAAITTIFQIHTTQKLPGDILVFLTGQEEIESMQTKLLEILSK 474
+PV+I Y+ + +YI +++ IH + GDIL+F+TGQ++IE + ++L E +
Sbjct: 181 LYPVEILYSKERPVSYIESSLKVAIDIHVREP-EGDILIFMTGQDDIEKLVSRLEEKVRS 239
Query: 475 LDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKNCRKVVLATNIAETSLTIDGIKFVVDPG 534
L D ++ P++ +LP E Q ++F P P NCR+ +++TNIAETSLT+DG+ +V+D G
Sbjct: 240 LAEGSCMDAIIYPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDSG 299
Query: 535 FVKEQSY--SGGVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTKWSYYNELEKVPKP 592
+VK++ Y S G+ L + S+ +QRAGRAGR PGKC+RL+ Y ++ P
Sbjct: 300 YVKQRQYNPSSGMFSLDVIQISKVQANQRAGRAGRTRPGKCYRLYPLAVYRDDFLDATIP 359
Query: 593 EIXXXXXXXXXXXXXXXX--XXXXXHFPMLDKPKTIQLSEALENLYAIGALNSRGAITKV 650
EI F LD P + L +AL+ LY I A++ GAIT++
Sbjct: 360 EIQRTSLAGSVLYLKSLDLPDIDILKFDFLDAPSSESLEDALKQLYFIDAIDENGAITRI 419
Query: 651 GQVMCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESNSIFVPGLNSEEKTKLF 710
G+ M D P +P ++ ++ E + G L + +T+V+ML ++ EK +
Sbjct: 420 GRTMSDLPLEPSLSR----TLIEANETGCLSQALTVVAMLSAETTLLPARSKPSEKKRKH 475
Query: 711 ---GSLMQSS---DHMLYLWIYEQWEENGYSRRWCQDFKLQHKTMKRVLRIRQQLWKYCR 764
+L S DH+ L I+E W+ Y WC++ +Q + V QL+
Sbjct: 476 DEDSNLPNGSGYGDHIQLLQIFESWDRTNYDPVWCKENGMQPYCI--VTSEGGQLYAVSA 533
Query: 765 KQDFLLKHD--QNLTQLKENMPRSVIEA-------KIIKCFISGFPTNIAK--LSKQGYT 813
+ + D + L Q+ + + + ++ K+ K G IA+ L GY
Sbjct: 534 VRGMVFVKDVRRQLCQIMQKISKDGRKSSSRDDYRKLRKALCVGNANQIAERMLRHNGYR 593
Query: 814 NIKQDLSVSVHPSSVIFNRMKQEGKPMKYILYQSLMLTSKEFIRDCITFD 863
+ S VHPSSV+ +G Y++Y L+ T++ F+R+ D
Sbjct: 594 TLSFQ-SQLVHPSSVL--SADNDGMMPNYVVYHELISTTRPFMRNVCAVD 640
>At1g26370 [A] KOG0922 DEAH-box RNA helicase
Length = 710
Score = 405 bits (1042), Expect = e-112
Identities = 262/711 (36%), Positives = 389/711 (53%), Gaps = 93/711 (13%)
Query: 228 KSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDGKCVV 287
+ I E R+SLP+ + +++ ++++ ILI+VGETGSGKTTQLPQFL G+ +GK +
Sbjct: 29 QKIAEHRRSLPIASVEKRLVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGFCREGKMIG 88
Query: 288 CTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLND 347
TQPRR+AA ++A RVA+E +V LG++VGY+IRFDD TT T LKY TDG+LLRE L D
Sbjct: 89 ITQPRRIAAVTVAKRVAEECEVQLGQKVGYSIRFDD-TTSGSTRLKYMTDGLLLREALLD 147
Query: 348 PQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKD----------------------- 384
P LS YS I++DEAH+R++ TD+LL LL+ I + R
Sbjct: 148 PHLSRYSVIIVDEAHDRSVHTDVLLALLKKIQRTRSQPVSEKTEFGNVASQVQTTTRDAN 207
Query: 385 ------------------LRLIISSATMNATKFSKFFFDCPIFNVPGRRFPVDIHYTLQP 426
L+LII SA+++A FS++F +V GR+FPVDI YT+ P
Sbjct: 208 GPQQNGVLKGYQGRKLSPLKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPVDILYTVHP 267
Query: 427 EGNYINAAITTIFQIHTTQKLPGDILVFLTGQEEIESMQTKLLEILSKLDNTKFPDLLVV 486
E +Y++A + TIFQ + PGDILVFLTGQ+EIES++ + E L + K LL +
Sbjct: 268 ESDYVDATLVTIFQ-----EKPGDILVFLTGQDEIESVERLVQERLQNIPEDK-RKLLPL 321
Query: 487 PIYANLPQEQQSKIFEPTPKNCRKVVLATNIAETSLTIDGIKFVVDPGFVKEQSY--SGG 544
I++ LP EQQ K+F P P RKV+LATNIAETS+TI GI++V+DPGFVK +SY S G
Sbjct: 322 AIFSALPSEQQMKVFAPAPTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKG 381
Query: 545 VSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTKWSYYNELEKVPKPEIXXXXXXXXXX 604
+ L VP S+A QR+GRAGR GPGK FRL+ + + +LE KPEI
Sbjct: 382 MESLDVVPASKAQTLQRSGRAGREGPGKSFRLYPE-REFEKLEDSTKPEIKRCNLSNIIL 440
Query: 605 XXXXXXXXXXXHFPMLDKPKTIQLSEALENLYAIGALNSRGAI-TKVGQVMCDFPCDPEY 663
F +DKP + +AL L+++GAL G + VG M P +P Y
Sbjct: 441 QLKALGIDDIVGFDFIDKPSRGAIIKALAELHSLGALADDGKLENPVGYQMSRLPLEPVY 500
Query: 664 AK-VIYSSVFEESCNGVLPEIVTIVSMLQESNSIFVPGLNSEE-KTKLFGSLMQSSDHML 721
+K +I ++ F L E++ V++L + + P EE +T DH+
Sbjct: 501 SKALILANQF-----NCLEEMLITVAVLSVESIFYDPREKREEARTSKNHFASVEGDHLT 555
Query: 722 YLWIYEQWEE--------------NGYSRRWCQDFKLQHKTMKRVLRIRQQLWKYCRKQD 767
YL +Y + +E + ++WC++ + +++K I +Q+ ++ +
Sbjct: 556 YLSVYRESDEFLEKRKAAGSGNNIDKIMKKWCKENYVNSRSLKHARDIYRQIREHVEQIG 615
Query: 768 FLLKHDQNLTQLKENMPRSVIEAKIIKCFISGFPTNIAKLSKQG-YTNIKQDLSVSVHPS 826
F N++ +M +C + F A+ G Y ++ V +HP+
Sbjct: 616 F------NVSSCGNDM------LAFRRCLAASFFLKAAQRQLDGTYRALESGEVVHIHPT 663
Query: 827 SVIFNRMKQEGKPMKYILYQSLMLTSKEFIRDCITFDKYEWLTETMPHIYK 877
SV+F KP + +++ LM TSK++I++ D WL+E PH ++
Sbjct: 664 SVLF-----RAKP-ECVIFNELMQTSKKYIKNLTIIDSL-WLSELAPHHFQ 707
>Hs20336302 [A] KOG0922 DEAH-box RNA helicase
Length = 707
Score = 400 bits (1028), Expect = e-111
Identities = 248/666 (37%), Positives = 374/666 (55%), Gaps = 47/666 (7%)
Query: 228 KSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDGKCVV 287
++++ R+SLP++Q R ++L +R +++GETGSGKTTQ+PQ+L E G + G +
Sbjct: 65 EAVELQRRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQG-IIA 123
Query: 288 CTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLND 347
TQPRRVAA S+A+RV+DE LGK VGY +RFDD T+ D T +K+ TDGMLLRE ++D
Sbjct: 124 VTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSED-TRIKFLTDGMLLREAISD 182
Query: 348 PQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDL-----RLIISSATMNATKFSKF 402
L YS +++DEAHERT+ TD+L G+++ + RK+L ++I+ SATM+ FS++
Sbjct: 183 SLLRKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQY 242
Query: 403 FFDCPIFNVPGRRFPVDIHYTLQPEGNYINAAITTIFQIHTTQKLPGDILVFLTGQEEIE 462
F P+ + GR+ P+ + YT QP+ +Y++AA+ ++FQIH DILVFLTGQEEIE
Sbjct: 243 FNGAPVLYLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEIE 302
Query: 463 SMQTKLLEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKNCRKVVLATNIAETSL 522
+M +I L + P +LV+P+YA+LP QQ ++F+ PK RKV+++TNIAETS+
Sbjct: 303 AMSKTCRDIAKHLPD-GCPAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNIAETSI 361
Query: 523 TIDGIKFVVDPGFVKEQSYS--GGVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTKW 580
TI GIK+VVD G VK + Y+ G+ L S+ QR GRAGR G C+RL+T+
Sbjct: 362 TITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTE- 420
Query: 581 SYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALENLYAIGA 640
+ + +K+ PEI F + KP + A+ L +GA
Sbjct: 421 DEFEKFDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSKPSPDHIQAAIAQLDLLGA 480
Query: 641 LNSRG---AITKVGQVMCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESNSIF 697
L + +T +G+ M FP +P++AK I S + C EI+TIVS+L + +
Sbjct: 481 LEHKDDQLTLTPMGRKMAAFPLEPKFAKTILMSP-KFHCT---EEILTIVSLLSVDSVLH 536
Query: 698 VPGLNSEEKTKLFGSLMQS-SDHMLYLWIYEQWEENGYSRRWCQDFKLQHKTMKRVLRIR 756
P EE + + S DHM L IY ++ G ++ WC++ + K M V +R
Sbjct: 537 NPPSRREEVQGVRKKFISSEGDHMTLLNIYRTFKNLGGNKDWCKENFVNSKNMTLVAEVR 596
Query: 757 QQLWKYCRKQDFLLKHDQNLTQLKENMP----RSVIEAKIIKCFISGFPTNIAKLSKQG- 811
QL C LK +MP R +E+ + +C + A+L G
Sbjct: 597 AQLRDIC---------------LKMSMPIASSRGDVES-VRRCLAHSLFMSTAELQPDGT 640
Query: 812 YTNIKQDLSVSVHPSSVIFNRMKQEGKPMKYILYQSLMLTSKEFIRDCITFDKYEWLTET 871
Y V++HPSSV+F+ KP ++Y L+ T+K ++RD D +WL E
Sbjct: 641 YATTDTHQPVAIHPSSVLFH-----CKP-ACVVYTELLYTNKCYMRDLCVIDA-QWLYEA 693
Query: 872 MPHIYK 877
P ++
Sbjct: 694 APEYFR 699
>YKL078w [A] KOG0922 DEAH-box RNA helicase
Length = 735
Score = 395 bits (1014), Expect = e-109
Identities = 251/670 (37%), Positives = 383/670 (56%), Gaps = 40/670 (5%)
Query: 225 NKMKSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGY-TNDG 283
++ + + R++LPVYQ+++EI+ I + + +++GETGSGK+TQ+PQF++E Y T
Sbjct: 69 SRASDLLKMRETLPVYQHKREIMSYIESNPVTVLIGETGSGKSTQIPQFVLEKLYDTKKH 128
Query: 284 KCVVCTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLRE 343
+ TQPRRVAA ++A+RVA E LG++VGY++RFD+ TT +T LKY TDGMLLRE
Sbjct: 129 GSIAVTQPRRVAAINLATRVAQEHGCKLGEQVGYSVRFDNTTTT-RTRLKYLTDGMLLRE 187
Query: 344 FLNDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQ-DRKDLRLIISSATMNATKFSKF 402
+ + L YS I+IDEAHERT+ TD++LG L+ ++Q R DLR+I+ SAT+ A KFS+F
Sbjct: 188 LMMNSDLREYSVIVIDEAHERTVLTDLILGFLKSLIQGPRPDLRIIVMSATLQAEKFSEF 247
Query: 403 FFDCPIFNVPGRRFPVDIHYTLQPEGNYINAAITTIFQIHTTQKLPGDILVFLTGQEEIE 462
F + PI V GR+F V +Y P + ++A I QI+ ++L GDIL FL GQEEI+
Sbjct: 248 FNNAPILFVEGRKFDVKQYYLKAPTDDIVDAVIRCCIQINQGEEL-GDILCFLPGQEEID 306
Query: 463 SMQTKLLEILSKLDNTKFPDLLVV--PIYANLPQEQQSKIFEPTPKNCRKVVLATNIAET 520
T ++E ++K + + P L+V P+YA LP QQS +F P RKVV +TNIAET
Sbjct: 307 KAVT-IMEKIAKYVSDEAPVPLIVPYPLYAALPAVQQSLVFAPIKGFKRKVVFSTNIAET 365
Query: 521 SLTIDGIKFVVDPGF--VKEQSYSGGVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFT 578
S+TI G+KFVVD G VK + G++ L+TVP S+AS QR+GRAGR GK FRL+
Sbjct: 366 SVTISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQASAMQRSGRAGRESEGKSFRLYC 425
Query: 579 KWSYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALENLYAI 638
+ S Y +L K +PEI ++ + P + L+ LY +
Sbjct: 426 E-SDYVKLPKQSEPEIARSDVTSPVLMLKRYGVDDLLNWTWFENPGKEAIVMGLQELYEL 484
Query: 639 GALNSRGAITKVGQVMCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESNSIFV 698
GAL++RG ITK GQ M P P + V+ + S G L +++ IVS L N +
Sbjct: 485 GALDTRGKITKRGQQMALLPLQPHLSSVL----IKASEVGCLSQVIDIVSCLSVENLLLN 540
Query: 699 PGLNSEEKT-----------KLFGSLMQSSDHMLYLWIYEQWEENGYSRR---WCQDFKL 744
P ++ K +G L+ + + ++ YE + S WC+ +
Sbjct: 541 PSPEERDEVNERRLSLCNAGKRYGDLIMLKE-LFDIYFYELGKSQDASSERNDWCKGLCI 599
Query: 745 QHKTMKRVLRIRQQLWKYCRKQ-DFLLKHDQNLTQLKENMPRSVIEAKIIKCFISGFPTN 803
+ K V+R+R QL YC++ + + D+ ++ E+ + +KI+KCF++GF N
Sbjct: 600 SIRGFKNVIRVRDQLRVYCKRLFSSISEEDEESKKIGED---GELISKILKCFLTGFIKN 656
Query: 804 IA-KLSKQGYTNIKQDLSVSVHPSSVIFNRMKQEGKPMKYILYQSLMLTSKEFIRDCITF 862
A + + Y + +S+HPSS++F G I+Y + T+K + R+ ++
Sbjct: 657 TAIGMPDRSYRTVSTGEPISIHPSSMLFMNKSCPG-----IMYTEYVFTTKGYARN-VSR 710
Query: 863 DKYEWLTETM 872
+ WL E +
Sbjct: 711 IELSWLQEVV 720
>SPBC1711.17 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase
Length = 912
Score = 392 bits (1006), Expect = e-108
Identities = 208/442 (47%), Positives = 292/442 (66%), Gaps = 7/442 (1%)
Query: 221 EEQINKMKSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYT 280
+ + + KS +E R+ LP + R+++L IR +Q+LIVVGETGSGKTTQL QFL EDGY
Sbjct: 476 DTEFARTKSYREQREFLPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYEDGYH 535
Query: 281 NDGKCVVCTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGML 340
+G + CTQPRRVAA S+A RV++EM V LG VGY+IRF+D T PD T++KY TDG+L
Sbjct: 536 RNGM-IGCTQPRRVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPD-TVIKYMTDGVL 593
Query: 341 LREFLNDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNATKFS 400
LRE L L YS I++DEAHER+L+TDIL+GLL+ +L R+D++L+++SATMN+ KFS
Sbjct: 594 LRESLMQNNLEKYSVIIMDEAHERSLNTDILMGLLKKVLSRRRDIKLLVTSATMNSQKFS 653
Query: 401 KFFFDCPIFNVPGRRFPVDIHYTLQPEGNYINAAITTIFQIHTTQKLPGDILVFLTGQEE 460
FF P F +PGR +PVDI + P +Y+ AA+ + QIH +Q GDILVF+TGQE+
Sbjct: 654 DFFGGAPQFTIPGRTYPVDIMFAKAPCSDYVEAAVRQVLQIHLSQP-AGDILVFMTGQED 712
Query: 461 IESMQTKLLEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKNCRKVVLATNIAET 520
IE+ + + L++L + P L ++PIY+ +P + Q+KIF+ RKVV+ATNIAET
Sbjct: 713 IEATCEIIADRLNQLHDA--PRLSILPIYSQMPADLQAKIFDSAEPGVRKVVVATNIAET 770
Query: 521 SLTIDGIKFVVDPGFVKEQSYSG--GVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFT 578
SLT+ GI +VVD G+ K + Y+ G+ L P S+A+ +QRAGRAGR GPG +RL+T
Sbjct: 771 SLTVHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQANANQRAGRAGRTGPGIAYRLYT 830
Query: 579 KWSYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALENLYAI 638
+ +Y E+ + PEI F +D+P L +L L+ +
Sbjct: 831 EMAYIREMFETTLPEIQRTNLSNTVLILKSLGVEEISDFDFMDRPPNDTLMASLYELWTL 890
Query: 639 GALNSRGAITKVGQVMCDFPCD 660
GAL++ G +T +G+ M FP D
Sbjct: 891 GALDNFGKLTTLGKKMSLFPMD 912
>7295673 [A] KOG0922 DEAH-box RNA helicase
Length = 671
Score = 380 bits (976), Expect = e-105
Identities = 247/698 (35%), Positives = 385/698 (54%), Gaps = 43/698 (6%)
Query: 192 FDPESMIDFTDDTTDILEPVEDGRLAEALEEQINKMKSIKETRKSLPVYQYRQEILDSIR 251
F P+ + TDD I + + + A +N + E R+ LP+ QYR +IL +
Sbjct: 4 FKPKFLKPETDDA--ITDSAGGEQQSSAFVFNVNHNMGLMEQRERLPIRQYRDQILYCLE 61
Query: 252 QHQILIVVGETGSGKTTQLPQFLVEDGYTNDGKCVVCTQPRRVAATSIASRVADEMDVIL 311
+HQ++I+VGETGSGK+TQ+PQ+L E G+ G + T+PRRV+ ++A+RVA E ++
Sbjct: 62 KHQVVILVGETGSGKSTQVPQYLYEWGWHTKG-LIGITEPRRVSTVTLANRVAQERGELV 120
Query: 312 GKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLNDPQLSSYSAIMIDEAHERTLSTDIL 371
G VGY +RF + + T +K+ T+G+LLRE L DP L+ Y I++DEAHER + TD++
Sbjct: 121 GDTVGYVVRFLESMS-SCTKIKFMTEGILLREVLADPLLTQYGVIIVDEAHERNMLTDMI 179
Query: 372 LGLLRGILQDRKDLRLIISSATMNATKFSKFFF-----DCPI-FNVPGRRFPVDIHYTLQ 425
LGLL+ IL+ R L+LIISSAT++A+ FS+FF + + ++ GR PV Y +
Sbjct: 180 LGLLKKILRKRSSLKLIISSATIDASFFSEFFSWPGSGEVSVKLSIEGRMHPVSNFYLNE 239
Query: 426 PEGNYINAAITTIFQIHTTQKLPGDILVFLTGQEEIESMQTKLLEILSKLDNTKFPDLLV 485
P +Y+ + T++++H + PGDIL FLTGQEE+ L E ++ +++ +L V
Sbjct: 240 PCADYVKETVETVWKLHQKEP-PGDILAFLTGQEEVLEALDLLREYIA---SSEQENLKV 295
Query: 486 VPIYANLPQEQQSKIFEPTPKNCRKVVLATNIAETSLTIDGIKFVVDPGFVKEQSYSGGV 545
+P+Y ++ Q +F PK RKVVLATNIAETS+TI GI +V+D G+VK + Y+
Sbjct: 296 LPMYGSMSSTDQLSVFFTPPKGTRKVVLATNIAETSITIPGIVYVIDCGYVKVKWYNPKT 355
Query: 546 --SKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTKWSYYNELEKVPKPEIXXXXXXXXX 603
LV VP S+AS QRAGRAGR+ PGK +RL+TK S Y L PE+
Sbjct: 356 CSDSLVIVPVSKASAIQRAGRAGRMRPGKVYRLYTK-SDYEALAPRQPPEMRRSELSGAI 414
Query: 604 XXXXXXXXXXXXHFPMLDKPKTIQLSEALENLYAIGALNSRGAITK-VGQVMCDFPCDPE 662
F P L ALE+L+A+ A++ +G +TK VG ++ + P
Sbjct: 415 LQLKALGIGNILRFDFPSPPPAQNLLSALESLFALDAIDEQGNLTKPVGYLLAELPFSAM 474
Query: 663 YAKVIYSSVFEESCNGVLPEIVTIVSMLQESNSIFVPGLNSEEKTKLFGSL---MQSSDH 719
+K++Y S G EI+TI+++LQ + P +++ + D
Sbjct: 475 LSKMLYVS----GQMGCSEEIITIIALLQVQSIFSRPASAVAQQSGRIAHRKFEVAEGDF 530
Query: 720 MLYLWIYEQWEENGYSRRWCQDFKLQHKTMKRVLRIRQQLWKYCRKQDFLLKHDQNLTQL 779
+ L Y + E G ++ +C + L ++ +KR +R+QL RK K+ +
Sbjct: 531 ITMLNAYTGFVEEGMTKEFCGQYFLIYRNLKRAHSLREQLITVARK-----KYGIPIFSC 585
Query: 780 KENMPRSVIEAKIIKCFISGFPTNIAKLSKQG-YTNIKQDLSVSVHPSSVIFNRMKQEGK 838
K ++ K+ KC +GF T +A L G Y I +++HP+S ++ + +
Sbjct: 586 KGDV------EKLCKCITAGFFTQVAYLHHSGVYRQISSGTELAIHPNSTLYTLPQAQ-- 637
Query: 839 PMKYILYQSLMLTSKEFIRDCITFDKYEWLTETMPHIY 876
Y++Y L+ T+K F+ + +T K EWLTE PH Y
Sbjct: 638 ---YVVYGELLQTTKLFM-NYVTVIKREWLTELAPHYY 671
>Hs21362038 [A] KOG0922 DEAH-box RNA helicase
Length = 779
Score = 370 bits (951), Expect = e-102
Identities = 236/674 (35%), Positives = 369/674 (54%), Gaps = 50/674 (7%)
Query: 233 TRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDGKCVVCTQPR 292
T + P+ + R++I+ ++R + LIV G TGSGKTTQLP++L E G++ G V TQPR
Sbjct: 49 TTPTFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGV-TQPR 107
Query: 293 RVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLNDPQLSS 352
+VAA S+A RVA+EM LG +VGY +RFDD ++ + T +KY TDG LL+ L DP L+
Sbjct: 108 KVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKE-TAIKYMTDGCLLKHILGDPNLTK 166
Query: 353 YSAIMIDEAHERTLSTDILLGLLRGILQDR-----KDLRLIISSATMNATKFSKFFFDCP 407
+S I++DEAHERTL+TDIL GLL+ + Q++ + L++++ SATM K S FF +CP
Sbjct: 167 FSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCP 226
Query: 408 IFNVPGRRFPVDIHYT--LQPEGN----YINAAITTIFQIHTTQKLPGDILVFLTGQEEI 461
IF++PGR +PV + + P YI A + IH + + GDILVFLTGQ EI
Sbjct: 227 IFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNE-MAGDILVFLTGQFEI 285
Query: 462 ESMQTKLLEILSKLD------NTKFPDLLVVPIYANLPQEQQSKIFEPTPKNCRKVVLAT 515
E L ++ +D +T LL++P Y ++ +QQ +IF P P RK V++T
Sbjct: 286 EKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVIST 345
Query: 516 NIAETSLTIDGIKFVVDPGFVKEQSYSG--GVSKLVTVPCSRASVDQRAGRAGRLGPGKC 573
NI+ TSLTIDGI++VVD GFVK+ +++ G+ L VP S++ QR+GRAGR GKC
Sbjct: 346 NISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKC 405
Query: 574 FRLFTKWSYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALE 633
FR+++K + + PEI FP LD P + EAL+
Sbjct: 406 FRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALK 465
Query: 634 NLYAIGALNSRGAITKVGQVMCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQES 693
LY A++ G +T++G M +FP P + + + + +LP I +ML
Sbjct: 466 QLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLP----IAAMLSVE 521
Query: 694 NSIFVPGLNSE-------EKTKLFGSLMQSSDHMLYLWIYEQWEENGYSRRWCQDFKLQH 746
N +F+ ++ E +L +D I+EQ + +G WCQ +
Sbjct: 522 N-VFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHW 580
Query: 747 KTMKRVLRIRQQLWKYCRKQDFLLKHDQNLTQLKENMPRSVIEAKIIKCFISGFPTNIAK 806
+ + R+ QL + RK LK + + P+ + + +C +G+ N+A+
Sbjct: 581 RCLFSAFRVEAQLRELIRK----LKQQSDFPKETFEGPKHEV---LRRCLCAGYFKNVAR 633
Query: 807 LSKQGYTNIKQD---LSVSVHPSSVIFNRMKQEGKPMKYILYQSLMLTSKEFIRDCITFD 863
S G T D V +HPSS + +QE K +++I++ +++T+K + R +
Sbjct: 634 RS-VGRTFCTMDGRGSPVHIHPSSALH---EQETK-LEWIIFHEVLVTTKVYAR-IVCPI 687
Query: 864 KYEWLTETMPHIYK 877
+YEW+ + +P +++
Sbjct: 688 RYEWVRDLLPKLHE 701
>ECU11g0860 [A] KOG0922 DEAH-box RNA helicase
Length = 664
Score = 363 bits (931), Expect = e-100
Identities = 239/644 (37%), Positives = 354/644 (54%), Gaps = 56/644 (8%)
Query: 227 MKSIKETRKS---LPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDG 283
++SIK+T + V EI + + Q+L++ G+TG GKTT++P++L+ G
Sbjct: 44 LESIKKTEGGSGEVSVEDKMDEIFAKLEKSQVLLIQGDTGCGKTTKIPKYLLR----KYG 99
Query: 284 KCVVCTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLRE 343
K +VC+QPRR+AA SIA +VA +M +G++VGY+IRFDD ++ +T LKY TDG+LLRE
Sbjct: 100 K-IVCSQPRRIAAVSIAKKVAVDMKGKIGEDVGYSIRFDDMSS-GRTRLKYVTDGVLLRE 157
Query: 344 FLNDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNATKFSKFF 403
ND L Y ++IDEAHER+++ DILLG L+ IL +RKDLR++I SAT+N+ KF+ F
Sbjct: 158 IKNDKHLKKYDVVIIDEAHERSVNIDILLGYLKSILSERKDLRVVIMSATLNSEKFAS-F 216
Query: 404 FDCPIFNVPGRRFPVDIHYTLQPE-GNYINAAITTIFQIHTTQKLPGDILVFLTGQEEIE 462
F C + R FP++I + + + +Y++ A+ T+ QIH ++ GDILVFLTG++EI
Sbjct: 217 FRCQTVEIRHRMFPLEIFFLKKSDVADYVDEAMKTVVQIHRGEE-SGDILVFLTGRDEIN 275
Query: 463 SMQTKLLEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKNCRKVVLATNIAETSL 522
S + L+E+L D V IY+ L E+Q +F T K RK+VLATNIAETS+
Sbjct: 276 SGREILMEVLGN-------DAEVCCIYSTLSPEEQEAVFRKTKK--RKIVLATNIAETSI 326
Query: 523 TIDGIKFVVDPGFVKEQSYSG--GVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTKW 580
TI+G+++VVD G K+ YS G+ L V S+A QRAGRAGR GK FR+++K
Sbjct: 327 TIEGVRYVVDSGRAKQMRYSASFGMDILEVVWISKAQAKQRAGRAGRTQAGKVFRMYSK- 385
Query: 581 SYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALENLYAIGA 640
Y +++ PEI +F ++DKP + +ALE LY + A
Sbjct: 386 EEYQKMDDNTTPEIFCCNLGKIVLELKSIGVDDIVNFNLIDKPDASNVKKALEMLYYLRA 445
Query: 641 LNSRGAITKVGQVMCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESNS-IFVP 699
+ G IT +G P DPE A S+ S G L ++ I +ML N + VP
Sbjct: 446 IGGDGKITSIGVKASTIPLDPELA----VSLIVSSELGCLEDVSIIAAMLSVGNVWLDVP 501
Query: 700 GLNSEEKTKL---FGSLMQSSDHMLYLWIYEQWEENGYSRRWCQDFKLQHKTMKRVLRIR 756
+ K L + DH L L IY +WE+ G+ + + L KTM + ++I+
Sbjct: 502 RYSQSYKAFLGARAAHFDKRGDHFLLLKIYRRWEKTGFKISHLKRWFLNVKTMLQTVKIK 561
Query: 757 QQLWKYCRKQDFLLKHDQNLTQLKENMPRSVIEAKIIKCFISGFPTNIAKLSKQGYTNIK 816
+QL R P E+ I+ +G+ N+AKL + Y +I
Sbjct: 562 KQLCSMFRS------------------PCKSDESGILPSLCAGYFMNVAKLVGESYVSIF 603
Query: 817 QDLSVSVHPSSVIFNRMKQEGKPMKYILYQSLMLTSKEFIRDCI 860
D +H +S + + KYILY +L T KE+ R C+
Sbjct: 604 NDTPCFIHYTSCM------SRQNAKYILYHTLCRTGKEYARYCV 641
>ECU09g0150 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase
Length = 784
Score = 352 bits (904), Expect = 1e-96
Identities = 243/727 (33%), Positives = 381/727 (51%), Gaps = 73/727 (10%)
Query: 163 WEEEQMKK---SVIKADADE-------IKVKDSDNYEF----VFDP--ESMIDFTDDTTD 206
WE +MK SV +A +DE + K+S + EF VFDP + I+ T+
Sbjct: 12 WEMRKMKAAGLSVEEAYSDEEGGLVPDLVYKESSS-EFLGNKVFDPVLRNKIEIEKPGTE 70
Query: 207 ILEPVEDGRLAEALEEQINKMKSI-----KETRKSLPVYQYRQEILDSIRQHQILIVVGE 261
I + G + ++ + S +E + LP+ +R ++++ + +H+++++VGE
Sbjct: 71 ISAVAKRGSVFLSVHPRSYVAPSASGEVDREVSQRLPIESFRDDLMEFVGKHRVIVLVGE 130
Query: 262 TGSGKTTQLPQFLVEDGYTNDGKCVVCTQPRRVAATSIASRVADEMDVILGKEVGYNIRF 321
TGSGK+TQ+P++L ++GY + G + CTQPRR AA S+AS + EM G VGY+IRF
Sbjct: 131 TGSGKSTQVPKYLYQEGYGDKG-IIGCTQPRRAAAISLASTLKREM----GCAVGYSIRF 185
Query: 322 DDRTTPDKTILKYTTDGMLLREFLNDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQD 381
D TT D T ++Y T+G+LL+E L D L YS +++DEAHERT + DI +GLL+ L++
Sbjct: 186 DSTTTQD-TKIRYMTEGILLQELLADKMLRRYSVVILDEAHERTTNLDISMGLLKLALKE 244
Query: 382 RKDLRLIISSATMNATKFSKFFFDCPIFNVPGRRFPVDIHYTLQPEGNYINAAITTIFQI 441
R DLR+II SAT+ A K +F CP FN+ GR +PV+ Y +Y+ + I I
Sbjct: 245 RDDLRIIIMSATIEAQKLCN-YFGCPAFNIEGRSYPVETRYLSVNVDDYVEWTVKKILYI 303
Query: 442 HTTQKLPGDILVFLTGQEEIESMQTKLLEILSK-LDNTKFPD-------LLVVPIYANLP 493
H GDILVF+TG++++E ++ I++ + N F + L V+P Y+ LP
Sbjct: 304 HENCG-EGDILVFVTGRDDVEG----VVGIVNHCIRNKCFGEGSEGGRGLKVLPFYSQLP 358
Query: 494 QEQQSKIFEPTPKNCRKVVLATNIAETSLTIDGIKFVVDPGFVKEQSYSGGVSK-LVTVP 552
+E Q+++F+ K+ RK +++TN+AETSLTI I +V+D G K YS + LVTVP
Sbjct: 359 EEMQNRVFQ-AEKDVRKCIVSTNVAETSLTIPNIGYVIDTGLQKISVYSYDTGESLVTVP 417
Query: 553 CSRASVDQRAGRAGRLGPGKCFRLFTKWSYYNELEKVPKPEIXXXXXXXXXXXXXXXXXX 612
SRA+ DQR GRAGR PG C+R++T +Y N++ P PEI
Sbjct: 418 ISRANADQRTGRAGRTRPGVCYRMYTADTYENDMLPSPVPEIQRTNIHNVVLLLLKHGVH 477
Query: 613 XXXHFPMLDKPKTIQLSEALENLYAIGALNSRGAITKVGQVMCDFPCDPEYAKVIYSSVF 672
F +D+P + AL L+ +GA+ SRG +TKVG+ M + DP A+++ +
Sbjct: 478 DILGFDFVDRPSEELIQGALLGLHRLGAVCSRGLLTKVGKEMSELRLDPPLARMVLGA-- 535
Query: 673 EESCNGVLPEIVTIVSMLQESNSIFVPGLNSEEKTKLFGSLMQSSDHMLYLWIYEQWEEN 732
+ G + EI +I SML V + + K Q D + L I+ +
Sbjct: 536 --AGYGAVNEIASIASMLS------VHEVFHRDFDKSSPLCHQGCDFLTLLNIFNAFIRQ 587
Query: 733 GYSRRWCQDFKLQHKTMKRVLRIRQQLWKYCRKQDFLLKHDQNLTQLKENMPRSVIEAKI 792
WC K+ +KR ++ + R+ + ++L KI
Sbjct: 588 KNRSEWCNKMKVSEHALKRATETKRAVLMSLREMGVPISSTRSLD-------------KI 634
Query: 793 IKCFISGFPTNIAKLSKQGYTNIKQDLSVSVHPSSVIFNRMKQEGKPMKYILYQSLMLTS 852
+C IS N+A+ +GY + + VHPSSV+ + Q YI++ + T
Sbjct: 635 QRCIISSVHYNVARRRGKGYVCLSNFRACMVHPSSVLADSYSQ------YIIFYKHLSTR 688
Query: 853 KEFIRDC 859
E++ C
Sbjct: 689 AEYMYCC 695
>SPAC145.03 [A] KOG0922 DEAH-box RNA helicase
Length = 647
Score = 349 bits (895), Expect = 1e-95
Identities = 227/643 (35%), Positives = 362/643 (55%), Gaps = 33/643 (5%)
Query: 234 RKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDGKCVVCTQPRR 293
+K LP+ +YR ++L ++ Q+QI IV+G TG GKTTQ+PQFL E G+ + + CTQPRR
Sbjct: 22 KKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGIIGCTQPRR 81
Query: 294 VAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLNDPQLSSY 353
+ A S++ RV+ E++ G GY+I+FD + +KT +KY TDG+LL E DP L Y
Sbjct: 82 LVAKSVSERVSLELNSPPGSLCGYSIQFDHNVS-EKTKIKYMTDGILLNEIFFDPLLERY 140
Query: 354 SAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNATKFSKFFFDCPI--FNV 411
S +++DE HERTLSTD+LLG+L+ IL+ R D RL++SSA+++A K S+FF + ++
Sbjct: 141 SIVILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASVDANKLSQFFGQDKVCTMSI 200
Query: 412 PGRRFPVDIHYTLQPEGNYINAAITTIFQIHTTQKLPGDILVFLTGQEEIESMQTKLLEI 471
G+ FPV+ + +P NY+++AI T+ I++T PGDILVFL+G++EIE K+ +
Sbjct: 201 EGKLFPVETLFLQKPTENYVDSAIETVININSTYP-PGDILVFLSGRKEIEYCIKKIEDS 259
Query: 472 LSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKNCRKVVLATNIAETSLTIDGIKFVV 531
L + L+ +P++A L ++Q ++F + RKV+ +TNIAETS+TIDGI +VV
Sbjct: 260 LIHA-SEDCQTLVPLPLHAGLTVDEQMRVFNIYDGDFRKVIFSTNIAETSITIDGIVYVV 318
Query: 532 DPGFVKEQSYS--GGVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTKWSYYNELEKV 589
D GF K++ Y+ SKL+ VP S++S QR+GRAGR GK FRL+T+ Y+ +++
Sbjct: 319 DSGFNKQRIYNPYTRTSKLINVPISKSSAIQRSGRAGRTMRGKVFRLYTE-KAYSLMKEE 377
Query: 590 PKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALENLYAIGALNSRGAIT- 648
+ +I FP +P T+ L ALE+LY +G L+ G +T
Sbjct: 378 FEADILNCDMSPLVLFLKGLGLKNILQFPFFVRPPTVHLMAALEDLYLLGVLDESGNLTD 437
Query: 649 KVGQVMCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESNSIFVPGLNSEEKTK 708
+G + + D +K + +S + G EI++I S+L + P +S+
Sbjct: 438 PLGIQISNSFLDANISKALLTS----NQFGCTHEILSIASILTAGEVFYNPTSSSKNDAF 493
Query: 709 LFGS--LMQSSDHMLYLWIYEQWEENGYSRRWCQDFKLQHKTMKRVLRIRQQLWKYCRKQ 766
+ S D + L ++E + N +WC+ L ++T+++ L IR L ++ K
Sbjct: 494 VAHSSFFANEGDIITALNVFESFVGNKKDLQWCRKNYLNYQTLRQALDIRTHLVRFLNK- 552
Query: 767 DFLLKHDQNLTQLKENMPRSVIEAKIIKCFISGFPTNIAKLSKQGYTNIKQDLSVSVHPS 826
F + Q L P S +KI+KC + GF N+A L G V + S
Sbjct: 553 -FSIPTAQRL-------PSSDC-SKILKCLLDGFVRNVAHLQNDGSYKTIGGKQVWLDSS 603
Query: 827 SVIFNRMKQEGKPMKYILYQSLMLTSKE-FIRDCITFDKYEWL 868
SV+ K +I+Y S + + + F+++ + + WL
Sbjct: 604 SVLHE------KKTPWIMYSSAVESETQIFVKNISKIESF-WL 639
>7297620 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase
Length = 703
Score = 343 bits (880), Expect = 7e-94
Identities = 226/675 (33%), Positives = 361/675 (53%), Gaps = 57/675 (8%)
Query: 225 NKMKSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDGK 284
+K SI++ +KSLPV+ R IL + + ++++ ETGSGKTTQ+PQFL+ GY +G
Sbjct: 56 SKRTSIEQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGYAKNGM 115
Query: 285 CVVCTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREF 344
+ TQPRRVAA ++A RVA E++ +G VGY +RF+D T T +++ TDG+LLRE
Sbjct: 116 IGI-TQPRRVAAITVARRVAQELNGTIGDTVGYTVRFED-VTSRATKIRFLTDGVLLRES 173
Query: 345 LNDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRK-----DLRLIISSATMNATKF 399
+ D L YS I++DEAHERT++ D+L G+++ ++R+ +L+++++SATM+ F
Sbjct: 174 IKDRLLLKYSVIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHF 233
Query: 400 SKFFFDCPIFNVPGRRFPVDIHYTLQPEGNYINAAITTIFQIHT------------TQKL 447
+F +C + GR +PV + +T + +YI+ + I T
Sbjct: 234 GNYF-NCKGMYLEGRTYPVRVMHTKEEHEDYIHTVLPRRVDIPNRARGNRVIGPTNTPAC 292
Query: 448 PGDILVFLTGQEEIESMQTKLLEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKN 507
G+ +V + + K+ L ++D T DL V +YA L Q +Q + F PTP N
Sbjct: 293 QGESIVV----QPTDCTSLKISCSLFQIDTTGTTDLRVFTLYAQLSQGKQLECFVPTPAN 348
Query: 508 CRKVVLATNIAETSLTIDGIKFVVDPGFVKEQSYS--GGVSKLVTVPCSRASVDQRAGRA 565
RKV+LATNIAETS+TI GI+ V+D GFVKE+S++ G+ L +V S+A QRAGRA
Sbjct: 349 VRKVILATNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQRAGRA 408
Query: 566 GRLGPGKCFRLFTKWSYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKT 625
GR G C+R +TK + + +PEI +F LD P
Sbjct: 409 GRDADGTCYRAYTK-AEMDSFADATQPEI-LRTNPTSMVLQLLALDIDCNNFDFLDPPLE 466
Query: 626 IQLSEALENLYAIGALNS--RGAITKVGQVMCDFPCDPEYAKVIYSSVFEESCNGVLPEI 683
L A ++L A+GA+ + IT +G+ M +P DP+Y+K++ ++ S G + EI
Sbjct: 467 DGLRSAYKSLDALGAIKTGDDSYITPLGRQMVQYPLDPKYSKLLLTA----SSFGCMEEI 522
Query: 684 VTIVSMLQESNSIFVPGLNSEEKTKLFGSLMQS--SDHMLYLWIYEQWEENGYSRRWCQD 741
+++VS+L S+ +FV E L + QS DH+ L ++ + ++ + WC D
Sbjct: 523 LSLVSVL-SSDHVFVSNSEKNEMAALAHAKFQSKHGDHLTLLNVFNGFLKSEKPKMWCHD 581
Query: 742 FKLQHKTMKRVLRIRQQLWKYCRKQDFLLKHDQNLTQLKENMPRSVIEAKIIKCFISGFP 801
L +++ +R+QL + L ++ LK KC ++GF
Sbjct: 582 NYLNLRSLTYARNVRRQLREISEHLHLALNSSDDIEMLK-------------KCILNGFF 628
Query: 802 TNIAKLSKQG-YTNIKQDLSVSVHPSSVIFNRMKQEGKPMKYILYQSLMLTSKEFIRDCI 860
NIA L + G Y ++ +HPSSV+ + K YIL+ ++ T + F+R +
Sbjct: 629 ENIAVLQRDGFYITASGNIRSKIHPSSVLHGKYKP-----SYILFTEIVQTEQTFLRQ-V 682
Query: 861 TFDKYEWLTETMPHI 875
T EW+ E +P +
Sbjct: 683 TEISIEWIKEVVPFV 697
>SPAPB1A10.06c [AJ] KOG0926 DEAH-box RNA helicase
Length = 1183
Score = 299 bits (765), Expect = 1e-80
Identities = 224/694 (32%), Positives = 353/694 (50%), Gaps = 114/694 (16%)
Query: 224 INKMKSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDG 283
IN+ I+E+R +LP+ Q I++ I + ++I+ G TGSGKTTQLPQFL E G+++
Sbjct: 385 INRPPEIQESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPE 444
Query: 284 K----CVVCTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGM 339
+ TQPRRVAA SIA RV++E+ K V Y IRFD PD T +K+ TDG+
Sbjct: 445 SENPGMIAITQPRRVAAVSIAKRVSEELTGFSSK-VSYQIRFDSTINPD-TAIKFMTDGI 502
Query: 340 LLREFLNDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDR----------KDLRLII 389
LLRE +D L++YSA+++DEAHER+++TDILLGLL I++ R K L+LII
Sbjct: 503 LLRELSSDFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLII 562
Query: 390 SSATMNATKFSK----FFFDCPIFNVPGRRFPVDIHYTLQPEGNYINAAITTIFQIHTTQ 445
SAT+ T FS+ F PI + R++PV IH+ + +Y+ A + IH +
Sbjct: 563 MSATLRVTDFSENKLLFSVPPPIIKIDARQYPVSIHFNRTTKPDYLQDAFDKVCLIH--K 620
Query: 446 KLP-GDILVFLTGQEEI-----------------------------------ESMQTKLL 469
+LP G ILVFLTGQ+E+ E +Q++
Sbjct: 621 RLPAGSILVFLTGQQEVEQLCQMLRKRFVRSFRPLKSRARIVVSRKTMSVENEDLQSETE 680
Query: 470 EI----LSKLDNTKFPD----LLVVPIYANLPQEQQSKIFEPTPKNCRKVVLATNIAETS 521
+I S + + D + V+P+Y+ L E Q K+F+ +P+ R ++ATN+AETS
Sbjct: 681 DIDQVPTSSSSSVTYDDESEPMYVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVAETS 740
Query: 522 LTIDGIKFVVDPGFVKEQSYS--GGVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTK 579
+TI I++VVD G KE+ Y+ V K S+A+ DQRAGRAGR GPG C+RL++
Sbjct: 741 ITIPNIRYVVDCGKAKERVYNEKTSVQKFEVRWISKANADQRAGRAGRTGPGHCYRLYSS 800
Query: 580 WSYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALENLYAIG 639
+ + PEI +FP P +L ++L+ L +G
Sbjct: 801 AVFDSSFPLHSLPEILRTPVESIVLQMKNMNIDNIANFPFPTSPGRSRLEKSLKLLSNLG 860
Query: 640 ALNSRGAITKVGQVMCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESNSIFV- 698
A++S G +TK+G+ M FP P ++K++ +G LP ++ +VS L N +FV
Sbjct: 861 AIDSEGVLTKLGEQMSLFPLSPRFSKMLIIG----QQHGCLPYVIALVSAL-SINQLFVS 915
Query: 699 ----------PGLNSEE---------------KTKLFG-----SLMQSSD----HMLYLW 724
SEE K ++ G S Q+ D + L
Sbjct: 916 KQSLLYDAHDKNSRSEETDLIDDDEIKQKEEYKNRMRGYFNAISRFQAIDPDAPALSLLS 975
Query: 725 IYEQWEENGYSRRWCQDFKLQHKTMKRVLRIRQQLWKYCRKQDFLLKHDQNLTQLKENMP 784
++ R++C++ L+ K ++ V +R+Q+ ++ ++++ ++ +L+ P
Sbjct: 976 AVCAYDYASDKRKFCKENYLREKALEEVTNLRKQIIGLLKR--YMVRVEKEFFKLQLKPP 1033
Query: 785 RSVIEAKIIKCFI-SGFPTNIAKLSKQ--GYTNI 815
SV + K ++ FI S + +A K+ GY +
Sbjct: 1034 TSV-QIKALRQFIASAYIDQVALYDKEKRGYVTL 1066
>At2g35920 [A] KOG0920 ATP-dependent RNA helicase A
Length = 993
Score = 293 bits (751), Expect = 6e-79
Identities = 234/753 (31%), Positives = 365/753 (48%), Gaps = 108/753 (14%)
Query: 202 DDTTDILEPVEDGRLAEALEEQINKMKS------IKETRKSLPVYQYRQEILDSIRQHQI 255
D + + + +E + + AL+E+ K+K+ +K R+ LP ++ ++E L+S+ Q+Q+
Sbjct: 187 DSASKLPDSLEKEKFSFALKERQEKLKATESVKALKAFREKLPAFKMKEEFLNSVSQNQV 246
Query: 256 LIVVGETGSGKTTQLPQFLVEDGYTN--DGKC-VVCTQPRRVAATSIASRVADEMDVILG 312
L+V GETG GKTTQLPQF++E+ ++ C ++CTQPRR++A S+ASR++ E +G
Sbjct: 247 LVVSGETGCGKTTQLPQFILEEEISSLRGADCNIICTQPRRISAISVASRISAERGESIG 306
Query: 313 KEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLNDPQLSSYSAIMIDEAHERTLSTDILL 372
+ VGY IR + + + D+T L + T G+LLR DP L++ S +++DE HER ++ D LL
Sbjct: 307 ESVGYQIRLESKRS-DQTRLLFCTTGVLLRRL--DPNLTNVSHLLVDEIHERGMNEDFLL 363
Query: 373 GLLRGILQDRKDLRLIISSATMNATKFSKFFFDCPIFNVPGRRFPV------DI----HY 422
+LR +L R DLRLI+ SAT+NA FS +F + P ++PG FPV D+ Y
Sbjct: 364 IILRDLLPRRPDLRLILMSATINADMFSTYFGNSPTMHIPGFTFPVAELFLEDVLEKSRY 423
Query: 423 TLQ--PEGNYINAA-------------ITTIFQ--------------------------- 440
++ GNY ++ +TT+F+
Sbjct: 424 NIKSSDSGNYQGSSRGRRRESESKKDDLTTLFEDIDINSHYKSYSSATRNSLEAWSGAQI 483
Query: 441 --------IHTTQKLPGD--ILVFLTGQEEIESMQTKLLEILSKLDNTKFPDLLVVPIYA 490
I +L G ILVFLTG +EI + K+ D++KF LV+P++
Sbjct: 484 DVDLVEATIEHICRLEGGGAILVFLTGWDEISKLLEKINMNNFLGDSSKF---LVLPLHG 540
Query: 491 NLPQEQQSKIFEPTPKNCRKVVLATNIAETSLTIDGIKFVVDPGFVKEQSYS--GGVSKL 548
++P Q +IF+ P N RK+VLATNIAE+S+TID + +VVD G KE SY V+ L
Sbjct: 541 SMPTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKVACL 600
Query: 549 VTVPCSRASVDQRAGRAGRLGPGKCFRLFTKWSYYNELEKVPKPEIXXXXXXXXXXXXXX 608
+ S+AS QR GRAGR+ G C+RL+ K Y+ + PEI
Sbjct: 601 LPSWISKASAHQRRGRAGRVQAGVCYRLYPK-VIYDAFPQYQLPEIIRTPLQELCLHIKS 659
Query: 609 XXXXXXXHF--PMLDKPKTIQLSEALENLYAIGALNSRGAITKVGQVMCDFPCDPEYAKV 666
F L P + + A+E L IGALN +T +G+ +C P DP K+
Sbjct: 660 LQVGSIGSFLAKALQPPDALAVENAIELLKTIGALNDVEELTPLGRHLCTLPVDPNIGKM 719
Query: 667 IYSSVFEESCNGVLPEIVTIVSMLQESNSIFVPGLNSEE--KTKLFGSLMQSSDHMLYLW 724
+ + N L TI + L + +P EE + K + + SDH+ L
Sbjct: 720 LLIGAIFQCVNPAL----TIAAALAYRSPFVLPLNRKEEADEAKRYFAGDSCSDHIALLK 775
Query: 725 IYEQWEE---NGYSRRWCQDFKLQHKTMKRVLRIRQQLWKYCRKQDFLLKHDQN-LTQLK 780
YE + + G + +C L T++ + +R Q F+ K N Q
Sbjct: 776 AYEGYRDAKRGGNEKDFCWQNFLSPVTLRMMEDMRNQFLDLLSDIGFVDKSKPNAYNQYS 835
Query: 781 ENMPRSVIEAKIIKCFISGFPTNIAKLSKQG-----YTNIKQDLSVSVHPSSVIFNRMKQ 835
+M I +G N+ + ++G YT K+ V +HP SV +
Sbjct: 836 YDM------EMISAVLCAGLYPNVVQCKRRGKRTAFYT--KELGKVDIHPGSV---NARV 884
Query: 836 EGKPMKYILYQSLMLTSKEFIRDCITFDKYEWL 868
+ Y++Y + T+ +IRD Y L
Sbjct: 885 NLFSLPYLVYSEKVKTTSVYIRDSTNISDYALL 917
>At4g01020_1 [A] KOG0922 DEAH-box RNA helicase
Length = 1424
Score = 293 bits (751), Expect = 6e-79
Identities = 212/653 (32%), Positives = 326/653 (49%), Gaps = 59/653 (9%)
Query: 121 LNETGKDYAENGDTSGFKMQDEVASKKQLLTAKLRNKTDRVNWEEEQMKKSVIKADADEI 180
+++ + A G K EV KK+ L A+ +R++ E KS+++
Sbjct: 204 IDDKSRQVASFSSKRGLKF--EVFEKKKALEAERDLVVNRLD-EFNNAMKSILRY----- 255
Query: 181 KVKDSDNYEFVFDPESMIDFTDDTTDILEPVEDGRLAEALEEQINKMKSIKETRKSLPVY 240
+ D YEF D E D D LE D R L ++ + LP+Y
Sbjct: 256 -LIGQDGYEFDVDDE---DDEDVAVFSLEGAYDWRRIHYLI-----LRECRRLEDGLPIY 306
Query: 241 QYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDGKCVVCTQPRRVAATSIA 300
YR++IL I QI++++GETGSGK+TQL QFL + G + +VCTQPR++AA ++
Sbjct: 307 AYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAAS-ESIVCTQPRKIAAMTLT 365
Query: 301 SRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLNDPQLSSYSAIMIDE 360
RV +E + T + + Y TD LL+ ++ D LS S ++IDE
Sbjct: 366 DRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVIIDE 425
Query: 361 AHERTLSTDILLGLLRGILQDRKDLRLIISSATMNATKFSKFFFDCPIFNVPGRRFPVDI 420
AHER+L+TD+LL LLR +L R DLRL+I SAT +A + S++ FDC I +V GR FPV+I
Sbjct: 426 AHERSLNTDLLLALLRKLLSRRIDLRLVIMSATADANQLSQYLFDCGILHVNGRNFPVEI 485
Query: 421 HYTLQPEGNYINAAITTI-----------FQIHTTQKLPGDILVFLTGQEEIESMQTKLL 469
Y+ P G N+ + I +IH T+K G IL FLT Q E+E + +
Sbjct: 486 VYS--PSGTEENSVVGRIASYAGDVVKMAVEIHKTEK-EGTILAFLTSQAEVEWACERFV 542
Query: 470 EILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKNCRKVVLATNIAETSLTIDGIKF 529
P + +P++ L E+Q +F+ P RKV+ ATNIAETSLTI G+K+
Sbjct: 543 A----------PSAIALPLHGKLSFEEQFMVFQNYPGR-RKVIFATNIAETSLTIPGVKY 591
Query: 530 VVDPGFVKEQSYS--GGVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTKWSYYNELE 587
V+D G VKE Y G+S L S++S QRAGRAGR PG+C+RL++K + ++ +
Sbjct: 592 VIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAGRAGRTEPGRCYRLYSK-TDFDSMN 650
Query: 588 KVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALENLYAIGALNSRGAI 647
+PEI F +D P ++ A++NL +GA+ + +
Sbjct: 651 LNQEPEIRRVHLGVALLRMLALGIDNIAAFEFVDAPVPEAIAMAIQNLVQLGAVVEKNGV 710
Query: 648 ---TKVGQVMCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESNSIFVPGLNSE 704
T+ G + +P+ K+I + E + + +++ ++SIF N +
Sbjct: 711 LELTQEGHCLVKLGLEPKLGKLILGCFRHR----MGKEGIVLAAVMANASSIFCRVGNFD 766
Query: 705 EKTKLFGSLMQ----SSDHMLYLWIYEQWEENGYSRR--WCQDFKLQHKTMKR 751
+K K +Q + D L +Y++W RR WC + L K+M+R
Sbjct: 767 DKMKADRLKVQFCNDNGDLFTLLSVYKEWASLPRDRRNKWCWENSLNAKSMRR 819
>7292966 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase
Length = 555
Score = 293 bits (750), Expect = 8e-79
Identities = 173/504 (34%), Positives = 279/504 (55%), Gaps = 30/504 (5%)
Query: 378 ILQDRKDLRLIISSATMNATKFSKFFFDCPIFNVPGRRFPVDIHYTLQPEGNYINAAITT 437
I+ R DL+LI++SATM+++KF+ FF + P F +PGR FPVD+ ++ +Y+ +A+
Sbjct: 6 IVARRHDLKLIVTSATMDSSKFATFFGNVPTFTIPGRTFPVDVMFSKNTCEDYVESAVKQ 65
Query: 438 IFQIHTTQKLPGDILVFLTGQEEIESMQTKLLEILSKLDNTKFPDLLVVPIYANLPQEQQ 497
Q+H T GD+L+F+ GQE+IE L E L+++DN P L ++PIY+ LP + Q
Sbjct: 66 ALQVHLTPN-EGDMLIFMPGQEDIEVTCEVLEERLAEIDNA--PALSILPIYSQLPSDLQ 122
Query: 498 SKIFEPTPKNCRKVVLATNIAETSLTIDGIKFVVDPGFVKEQSYSG--GVSKLVTVPCSR 555
+KIF+ + RK V+ATNIAETSLT+DGI +V+D G+ K + Y+ G+ L P S+
Sbjct: 123 AKIFQKSSDGLRKCVVATNIAETSLTVDGIIYVIDSGYCKLKVYNPRIGMDALQIYPISQ 182
Query: 556 ASVDQRAGRAGRLGPGKCFRLFTKWSYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXX 615
A+ +QR+GRAGR GPG+ +RL+T+ Y +EL + PEI
Sbjct: 183 ANANQRSGRAGRTGPGQAYRLYTQRQYKDELLALTVPEIQRTNLANTVLLLKSLGVVDLL 242
Query: 616 HFPMLDKPKTIQLSEALENLYAIGALNSRGAITKVGQVMCDFPCDPEYAKVIYSSVFEES 675
F +D P + +L L+ +GAL+ GA+T +G+ M +FP DP +++ +
Sbjct: 243 QFHFMDPPPQDNILNSLYQLWILGALDHTGALTTLGRQMAEFPLDPPQCQMLI-----VA 297
Query: 676 CN-GVLPEIVTIVSMLQESNSIFVPGLNSEEKTKLFGSLMQ-SSDHMLYLWIYEQWEENG 733
C G E++ IVSML + + P +E + + SDH+ YL +Y+QW +N
Sbjct: 298 CRMGCSAEVLIIVSMLSVPSIFYRPKGREDEADGVREKFQRPESDHLTYLNVYQQWRQNN 357
Query: 734 YSRRWCQDFKLQHKTMKRVLRIRQQLWKYCRKQDFLLKHDQNLTQLKENMPRSVIEAKII 793
YS WC + + K M++V +RQQL +D + + QNL+ + + ++
Sbjct: 358 YSSTWCNEHFIHIKAMRKVREVRQQL------KDIMTQ--QNLSVISCGIDWDIVR---- 405
Query: 794 KCFISGFPTNIAKLSKQG-YTNIKQDLSVSVHPSSVIFNRMKQEGKPMKYILYQSLMLTS 852
KC S + A+L G Y N++ + +HP+S ++ G Y++Y L++T+
Sbjct: 406 KCICSAYFYQAARLKGIGEYVNLRTGMPCHLHPTSALYGL----GTTPDYVVYHELIMTA 461
Query: 853 KEFIRDCITFDKYEWLTETMPHIY 876
KE+++ D Y WL E P +
Sbjct: 462 KEYMQCATAVDGY-WLAELGPMFF 484
>At5g10370_1 [A] KOG0922 DEAH-box RNA helicase
Length = 1427
Score = 291 bits (746), Expect = 2e-78
Identities = 205/630 (32%), Positives = 316/630 (49%), Gaps = 53/630 (8%)
Query: 142 EVASKKQLLTAKLRNKTDRVNWEEEQMKKSVIKADADEIKVKDSDNYEFVFDPESMIDFT 201
EV KK+ + A+ +R+ E KS+++ + D YEF D E +
Sbjct: 226 EVFEKKKAIEAERDLVVNRLE-EFNNAMKSILRY------LIGQDGYEFDLDDE---EEG 275
Query: 202 DDTTDILEPVEDGRLAEALEEQINKMKSIKETRKSLPVYQYRQEILDSIRQHQILIVVGE 261
D LE D R L + + LP+Y YR++IL I + QI++++GE
Sbjct: 276 DVAVFCLEGAYDWRRIHCLIR-----RECRRLEDGLPIYAYRRQILKKIHREQIMVLIGE 330
Query: 262 TGSGKTTQLPQFLVEDGYTNDGKCVVCTQPRRVAATSIASRVADEMDVILGKEVGYNIRF 321
TGSGK+TQL QFL + G + +VCTQPR++AA ++A RV +E +
Sbjct: 331 TGSGKSTQLVQFLADSGVAAS-ESIVCTQPRKIAAMTLADRVREESSGCYEENTVSCTPT 389
Query: 322 DDRTTPDKTILKYTTDGMLLREFLNDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQD 381
T + + Y TD LL+ ++ D LS S ++IDEAHER+L+TD+LL LL+ +L
Sbjct: 390 FSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVIIDEAHERSLNTDLLLALLKKLLSR 449
Query: 382 RKDLRLIISSATMNATKFSKFFFDCPIFNVPGRRFPVDIHYTLQPE---------GNYIN 432
R DLRL+I SAT +A + S++FF C I V GR FPV+I Y+ +Y+
Sbjct: 450 RIDLRLVIMSATADAKQLSQYFFSCGILLVNGRNFPVEIVYSPSDTEENSVVGGIASYVG 509
Query: 433 AAITTIFQIHTTQKLPGDILVFLTGQEEIESMQTKLLEILSKLDNTKFPDLLVVPIYANL 492
+ +IH T+K G IL FLT Q E+E + + P + +P++ L
Sbjct: 510 DVVKMAVEIHKTEK-EGTILAFLTSQAEVEWACERFIT----------PSAIALPLHGKL 558
Query: 493 PQEQQSKIFEPTPKNCRKVVLATNIAETSLTIDGIKFVVDPGFVKEQSYS--GGVSKLVT 550
E+Q ++F+ P RKV+ ATNIAETSLTI G+K+V+D G VKE Y G+S L
Sbjct: 559 SFEEQFRVFQNHPGR-RKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKV 617
Query: 551 VPCSRASVDQRAGRAGRLGPGKCFRLFTKWSYYNELEKVPKPEIXXXXXXXXXXXXXXXX 610
S++S QRAGRAGR PG+C+RL++K + ++ + +PEI
Sbjct: 618 CRVSQSSARQRAGRAGRTEPGRCYRLYSK-NDFDSMNLNQEPEIRRVHLGVALLRMLALG 676
Query: 611 XXXXXHFPMLDKPKTIQLSEALENLYAIGAL---NSRGAITKVGQVMCDFPCDPEYAKVI 667
F +D P ++ A++NL +GA+ N +T+ G + +P+ K+I
Sbjct: 677 VNNIAEFNFVDAPVPEAIAMAVQNLVQLGAVVEKNGVHELTQEGHCLVKLGLEPKLGKLI 736
Query: 668 YSSVFEESCNGVLPEIVTIVSMLQESNSIFVPGLNSEEKTKL----FGSLMQSSDHMLYL 723
+ E + + +++ ++SIF N ++K K Q+ D L
Sbjct: 737 LGCFRHR----MGKEGIVLAAVMANASSIFCRVGNFDDKMKADRLKVQFCNQNGDLFTLL 792
Query: 724 WIYEQWEENGYSRR--WCQDFKLQHKTMKR 751
+Y++W RR WC + L K+M+R
Sbjct: 793 SVYKEWASLPRERRNKWCWENSLNAKSMRR 822
>7293584_2 [A] KOG0922 DEAH-box RNA helicase
Length = 838
Score = 282 bits (721), Expect = 2e-75
Identities = 183/586 (31%), Positives = 309/586 (52%), Gaps = 52/586 (8%)
Query: 222 EQINKMKSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTN 281
E+ +++ +++T+++LP+ ++R+++ +++ +++IV G+TG GK+TQ+PQ+L + GY
Sbjct: 2 EKFQRIRKLRQTQRNLPIARFRKDLREALDTSRVVIVAGDTGCGKSTQVPQYLYDFGY-- 59
Query: 282 DGKCVVCTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLL 341
+ + CTQPRR+A S+ RVA E+ G V + IRF+ T IL + T+G+LL
Sbjct: 60 --RSIACTQPRRLACVSLCKRVAHELLDDYGSRVAFQIRFERSRTKLTNIL-FITEGLLL 116
Query: 342 REFLNDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNATKFSK 401
R+ L Y A+++DE HER L D LLG+ + +L+ R L+LI+ SAT+N F
Sbjct: 117 RQLAVAANLDQYDALILDEIHERNLFGDFLLGVTKCLLRARPQLKLILMSATINVELFHG 176
Query: 402 FFFD--CPIFNVPGRRFPVDIHYTLQP--------------EGNYINAA-----ITTIFQ 440
+F + + VPGR FP+ + Y P + N I+ A ++ I Q
Sbjct: 177 YFGEEGARLVQVPGRLFPIKLRYLPPPALELKAGQATSKRSQRNRIDPAPFVQVLSLIDQ 236
Query: 441 IHTTQKLPGDILVFLTGQEEIESMQTKLLEILSKLDNTKFPDLLVVPIYANLPQEQQSKI 500
+ T + GD+L+F++G EIES+ + E T+ LV+P+++ QSK+
Sbjct: 237 QYPTSER-GDVLIFVSGVNEIESVVEAVHEYA-----TEQTHWLVLPLHSGQAIADQSKV 290
Query: 501 FEPTPKNCRKVVLATNIAETSLTIDGIKFVVDPGFVKEQSYSGGV--SKLVTVPCSRASV 558
F+ P+ RK +++TNIAETSLT+DG++FVVD G VKE ++ +L S++S
Sbjct: 291 FDYAPEGMRKCIVSTNIAETSLTVDGVRFVVDSGKVKEMNFDATCKGQRLKEFWVSKSSA 350
Query: 559 DQRAGRAGRLGPGKCFRLFTKWSYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHFP 618
DQR GRAGR GPG CFRL+T YN E P PEI FP
Sbjct: 351 DQRKGRAGRTGPGVCFRLYTA-EQYNAFEAYPTPEIYRVPLDTMLLQMVSMGLPDVRAFP 409
Query: 619 MLDKPKTIQLSEALENLYAIGALNSRGAITKVGQVMCDFPCDPEYAK-VIYSSVFEESCN 677
++ P+T ++ + + L AL+ IT +G+ + + P + K ++ SVF E
Sbjct: 410 FIEAPETERIEQTILALKQHCALSVEEKITPLGRSLANLPVELSIGKMLLMGSVFPE--- 466
Query: 678 GVLPEIVTIVSMLQESNSIFVPGLNSEEKTKLFGSLMQSSDH--------MLYLWIYEQW 729
+ +++T+ +ML N + + + SL SDH + +W+ +
Sbjct: 467 --VEQLLTLAAMLSVQNPLTNRAHTDQRCVRERESL--ESDHGDLFTLVRLYNVWVQLKM 522
Query: 730 EENGYSRRWCQDFKLQHKTMKRVLRIRQQLWKYCRKQDFLLKHDQN 775
+G +R+WC+ ++ + V ++RQQ + ++ D +
Sbjct: 523 RRDG-TRQWCRRLGIEEQRFYEVTKLRQQFQRILESCGMVVASDSD 567
>ECU10g0680 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 797
Score = 277 bits (708), Expect = 6e-74
Identities = 183/566 (32%), Positives = 300/566 (52%), Gaps = 57/566 (10%)
Query: 218 EALEEQINKMKSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVED 277
EALE N+ K I+E RK+LP+Y + EI+ ++R ++ V G G GKTTQ+PQFL E
Sbjct: 166 EALE---NRRKDIEEYRKTLPIYYEKAEIVYAVRTSAVVFVTGAPGCGKTTQIPQFLYEG 222
Query: 278 GYTNDGKCVVCTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTD 337
G GK + TQPRR++ATSI+SR+ +EM+ L GY I+++ T +T +K TD
Sbjct: 223 GLA-AGKMIGVTQPRRISATSISSRINEEMNENL---CGYKIKYES-TVTSETRIKVMTD 277
Query: 338 GMLLREFLNDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRK----DLRLIISSAT 393
G+L++E +D LS YS I++DE HER + D+L+ ++ I++ R+ DL+L++ SAT
Sbjct: 278 GVLIKEIQDDFLLSRYSVIIVDEVHERNTNIDLLISIIPRIMKVRRARGDDLKLVLMSAT 337
Query: 394 MNATKFSKFFFDCPIFNVPGRRFPVDIHYTLQPEGNYINAAITTIFQI------------ 441
+A +F F D +F P +RF V Y + E +Y++AA + +I
Sbjct: 338 GDADEFKAFLGDVTVFVCPEKRFRVSTFYEEKTEADYLDAAYERVKKIVLSSSGARKRRR 397
Query: 442 -----------HTTQKLPGDILVFLTGQEEIESMQTKLLEILSKLDNTKFPDLLVVPIYA 490
ILVFLT ++EI ++++L D+ V+P+++
Sbjct: 398 VREGRSDIIGSEVLNDKSASILVFLTSKQEIYQLKSRL--------EDSGMDITVLPLHS 449
Query: 491 NLPQEQQSKIFEPTPKNCRKVVLATNIAETSLTIDGIKFVVDPGFVKEQSY-SGGVSKLV 549
+L + +Q +F+ P RKV+LATNIAETS+TI + FVVD G VK + S GV+K
Sbjct: 450 SLSKSEQKLVFDKMPN--RKVILATNIAETSITIPDVVFVVDSGKVKNRLVDSEGVTKYS 507
Query: 550 TVPCSRASVDQRAGRAGRLGPGKCFRLFTKWSYYNELEKVPKPEIXXXXXXXXXXXXXXX 609
++++ QR GRAGR GPG C+RL++ +Y E + KP+I
Sbjct: 508 IDFITKSNAIQRTGRAGRTGPGVCYRLYSGEAYERFYESM-KPQILREPLDGVVLNLLSL 566
Query: 610 XXXXXXHFPMLDKPKTIQLSEALENLYAIGALNSRGAITKVGQVMCDFPCDPEYAKVIYS 669
FP L KP T ++ A+ L +GA++ +T G+ M +P +P A+++ +
Sbjct: 567 GIRDIYSFPFLSKPGTTSINNAIARLQGLGAVDKDLKLTGTGKKMSRYPVEPRLARLLCA 626
Query: 670 SVFEESCNGVLPEIVTIVSMLQESNSIFVPGLNSEEKTKLFGSLMQSSDHMLYLWIYEQW 729
+ + + EI+ +VS++ + N K GS SD ++ L IY +
Sbjct: 627 ----QGLDDISTEIIVLVSLISSGAEV---RRNHSNKRYFEGS---KSDFLVQLSIYSDF 676
Query: 730 EENGYSRRWCQDFKLQHKTMKRVLRI 755
++ + +C++ + + T +++
Sbjct: 677 LKSKSRKAFCKEMGMSYTTAVEAMKM 702
>CE27603 [A] KOG0922 DEAH-box RNA helicase
Length = 974
Score = 276 bits (705), Expect = 1e-73
Identities = 187/565 (33%), Positives = 297/565 (52%), Gaps = 47/565 (8%)
Query: 222 EQINKMKSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTN 281
++ K++ +++ +K LP+ + EI++ ++ +Q+LIV G+TG GK+TQ+PQ+L++ G+T
Sbjct: 77 QKFQKLQKLRKLQKELPIAERAGEIVELLKTNQVLIVAGDTGCGKSTQVPQYLLKAGFTG 136
Query: 282 DGKCVVCTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLL 341
V CTQPRR+A T++A RVA E G EV + IRF+ T KT L + T+G+LL
Sbjct: 137 ----VACTQPRRIACTALARRVAYETLNQYGSEVAFQIRFET-TKSQKTKLLFLTEGLLL 191
Query: 342 REFLNDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNATKFSK 401
R+ D L Y+ I++DE HER L++D+L+GLLR + R DL+LI+ SAT+N F
Sbjct: 192 RQMEKDSLLEKYNVIILDEVHERHLTSDLLIGLLRDLCTKRDDLKLILMSATINLDLFKG 251
Query: 402 FFFDCPIFNVPGRRFPVDIH---------------YTLQPEGNYINAAITTIFQIHTTQK 446
+F P+ VPGR FP+D+ + + PE Y+ Q +TQ+
Sbjct: 252 YFEGAPVVQVPGRLFPIDVRWHPIKQFIDQSDKKTHKIDPE-PYLKILELIDKQFPSTQR 310
Query: 447 LPGDILVFLTGQEEIESMQTKLLEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPK 506
GD L+FL G EI SM + L+ ++L N +++ +++ L E+Q K+F+ P
Sbjct: 311 --GDALIFLNGVAEI-SMVAEHLKNYAELTN----GWIILMLHSTLSVEEQDKVFDQAPV 363
Query: 507 NCRKVVLATNIAETSLTIDGIKFVVDPGFVK--EQSYSGGVSKLVTVPCSRASVDQRAGR 564
RK +L+TN+AETS+TIDGI+FV+D G V + G KL S+AS +QR GR
Sbjct: 364 GIRKCILSTNVAETSVTIDGIRFVIDSGKVNLIKHEPGTGTQKLTEFWVSKASANQRKGR 423
Query: 565 AGRLGPGKCFRLFTKWSYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXH-FPMLDKP 623
AGR GPG C+RL+++ + +++ EI FP ++KP
Sbjct: 424 AGRTGPGICYRLYSQ-EQFEKMDDFTVSEINRVSLQEMALKMISLNLGLDPRTFPFIEKP 482
Query: 624 KTIQLSEALENLYAIGALNS-RG---AITKVGQVMCDFPCDPEYAK-VIYSSVFEESCNG 678
L+E LE L L S RG +T +G ++ P + AK ++Y V +E
Sbjct: 483 SEDVLNEGLEVLKFQRVLRSDRGDILTLTALGNMVSKLPVEVPIAKMLVYGCVVDE---- 538
Query: 679 VLPEIVTIVSMLQESNSIFVPGLNSEEKTKLFGSLMQS-SDHMLYLWIYEQW----EENG 733
L ++T+ + L + E + SL D + I+ +W G
Sbjct: 539 -LEVMLTVAAGLSVQSPFTNRSYRELEIVERRASLTSPLGDPFTLISIFREWVLQKAFEG 597
Query: 734 YSRRWCQDFKLQHKTMKRVLRIRQQ 758
+RRW + + + + ++R Q
Sbjct: 598 TARRWTMENGIDEHRLYEISKLRAQ 622
>Hs18497286 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1008
Score = 271 bits (693), Expect = 3e-72
Identities = 217/784 (27%), Positives = 367/784 (46%), Gaps = 106/784 (13%)
Query: 174 KADADEIKVKDSDNYEFVFDPESMIDFTDDTTDILEPVEDGRLAEALEEQINKMKS---- 229
K D E K+ + + F S ID D + E DG L + L E + K K+
Sbjct: 139 KLDIQEKKLINQEKKMFRIRNRSYID-RDSEYLLQENEPDGTLDQKLLEDLQKKKNDLRY 197
Query: 230 --IKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDGK--- 284
++ R+ LP Y ++E+++ I HQ+ ++ GETG GKTTQ+ QF++ D Y GK
Sbjct: 198 IEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFIL-DNYIERGKGSA 256
Query: 285 C-VVCTQPRRVAATSIASRVADEMDVILGK--EVGYNIRFDDRTTPDKTILKYTTDGMLL 341
C +VCTQPRR++A S+A RVA E G GY IR R + + Y T G++L
Sbjct: 257 CRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIIL 316
Query: 342 REFLNDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNATKFSK 401
+ +DP LSS S I++DE HER L +D+L+ +++ +L R DL++I+ SAT+NA KFS+
Sbjct: 317 QWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSE 376
Query: 402 FFFDCPIFNVPGRRFPVDIHYTLQ---------PE------------------------- 427
+F +CP+ ++PG FPV + Y L+ PE
Sbjct: 377 YFGNCPMIHIPGFTFPV-VEYLLEDVIEKIRYVPEQKEHRCQFKRGFMQGHVNRQEKEEK 435
Query: 428 --------GNYI-------NAAITTIFQIHTTQKLPGDILVFLTGQEEIESMQTKLLEIL 472
+Y+ +A+ + ++ K+ +++V L +E +L L
Sbjct: 436 EAIYKERWPDYVRELRRRYSASTVDVIEMMEDDKVDLNLIVALIRYIVLEEEDGAILVFL 495
Query: 473 SKLDNT-------------KFPDLLVVPIYANLPQEQQSKIFEPTPKNCRKVVLATNIAE 519
DN K L++P+++ +P Q+++F+ TP RK+V+ATNIAE
Sbjct: 496 PGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAE 555
Query: 520 TSLTIDGIKFVVDPGFVKEQSY--SGGVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLF 577
TS+TID + +V+D G +KE + +S + S+A+ QR GRAGR+ PG C+ L+
Sbjct: 556 TSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLY 615
Query: 578 TKWSYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHF--PMLDKPKTIQLSEALENL 635
+ L+ PEI +F ++D P + ++ +L
Sbjct: 616 NGLR-ASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVLLSIRHL 674
Query: 636 YAIGALNSRGAITKVGQVMCDFPCDPEYAK-VIYSSVFEESCNGVLPEIVTIVSMLQESN 694
+ AL+ + +T +G + P +P K +++ ++F C L ++TI + L +
Sbjct: 675 MELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALF---C--CLDPVLTIAASLSFKD 729
Query: 695 SIFVPGLNSEEKTKLFGSLMQS---SDHMLYLWIYEQWEEN-----GYSRRWCQDFKLQH 746
+P L E+ + SDH+ + +E WEE Y + +C ++ L
Sbjct: 730 PFVIP-LGKEKIADARRKELAKDTRSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSS 788
Query: 747 KTMKRVLRIRQQLWKYCRKQDFLLKH-----DQNLTQLKENMPRSVIEAKIIKCFISGFP 801
T++ + ++ Q ++ F+ + N+ E + ++VI A + ++
Sbjct: 789 NTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPESNINSDNEKIIKAVICAGLYP-KVAKIR 847
Query: 802 TNIAKLSKQGYTNIKQDLSVSVHPSSVIFNRMKQEGKPMKYILYQSLMLTSKEFIRDCIT 861
N+ K K K D V+VHP SV ++Q +++Y M TS ++ DC
Sbjct: 848 LNLGKKRKMVKVYTKTDGLVAVHPKSV---NVEQTDFHYNWLIYHLKMRTSSIYLYDCTE 904
Query: 862 FDKY 865
Y
Sbjct: 905 VSPY 908
>Hs22041930 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1035
Score = 266 bits (679), Expect = 1e-70
Identities = 186/557 (33%), Positives = 290/557 (51%), Gaps = 54/557 (9%)
Query: 212 EDGRLAEALEEQINKMKSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLP 271
E+ RL+++L E + + + LPV +R IL++I QH ++++ G+TG GKTT++P
Sbjct: 250 EEVRLSQSLLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIP 309
Query: 272 QFLVEDGYTNDGK---C-VVCTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTP 327
Q L+E Y +G+ C V+ TQPRR++A S+A RV+ E+ L + VG+ +R + +
Sbjct: 310 QLLLER-YVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPS 368
Query: 328 DKTILKYTTDGMLLREFLNDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRL 387
L + T G+LLR+ ++P L S +++DE HER ++TD LL LL+G+ + LRL
Sbjct: 369 RGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRL 428
Query: 388 IISSATMNATKFSKFFFDCPIFNVPGRRFPVDIHYT---LQPEGNY-------------- 430
++ SAT + +FS++F CP+ VPG +PV HY L G +
Sbjct: 429 VLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLHRHRHHESEDE 488
Query: 431 --INAAITTIFQIHTTQK-LPGDILVFLTGQEEIESMQTKLLEILSKLDNTKFPDLLVVP 487
++ + T +H + PG IL FL G +EI+ +Q +L E L + +K+ L++P
Sbjct: 489 CALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEALG-MHESKY---LILP 544
Query: 488 IYANLPQEQQSKIFEPTPKNCRKVVLATNIAETSLTIDGIKFVVDPGFVKEQSY--SGGV 545
+++N+P Q IF+ P RK+VLATNIAETS+TI+ I VVD G KE+ Y V
Sbjct: 545 VHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKV 604
Query: 546 SKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTKWSYYNELEKVPKPEIXXXXXXXXXXX 605
S L TV SRA+V QR GRAGR G + LF + S ++ PEI
Sbjct: 605 SCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPR-SRLEKMVPFQVPEI-------LRTP 656
Query: 606 XXXXXXXXXXHFP----------MLDKPKTIQLSEALENLYAIGALNSRGAITKVGQVMC 655
H P +D P + EA+ L IG L+ R +T +GQ +
Sbjct: 657 LENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLA 716
Query: 656 DFPCDPEYAK-VIYSSVFEESCNGVLPEIVTIVSMLQESNSIFVPGLNSEEKTKLFGSLM 714
DP AK ++ +++F C + P +V + + ++ S + +K K S
Sbjct: 717 HISTDPRLAKAIVLAAIFR--C--LHPLLVVVSCLTRDPFSSSLQNRAEVDKVKALLSHD 772
Query: 715 QSSDHMLYLWIYEQWEE 731
SDH+ ++ WEE
Sbjct: 773 SGSDHLAFVRAVAGWEE 789
>Hs20336294 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1194
Score = 266 bits (679), Expect = 1e-70
Identities = 186/557 (33%), Positives = 290/557 (51%), Gaps = 54/557 (9%)
Query: 212 EDGRLAEALEEQINKMKSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLP 271
E+ RL+++L E + + + LPV +R IL++I QH ++++ G+TG GKTT++P
Sbjct: 409 EEVRLSQSLLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIP 468
Query: 272 QFLVEDGYTNDGK---C-VVCTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTP 327
Q L+E Y +G+ C V+ TQPRR++A S+A RV+ E+ L + VG+ +R + +
Sbjct: 469 QLLLER-YVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPS 527
Query: 328 DKTILKYTTDGMLLREFLNDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRL 387
L + T G+LLR+ ++P L S +++DE HER ++TD LL LL+G+ + LRL
Sbjct: 528 RGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRL 587
Query: 388 IISSATMNATKFSKFFFDCPIFNVPGRRFPVDIHYT---LQPEGNY-------------- 430
++ SAT + +FS++F CP+ VPG +PV HY L G +
Sbjct: 588 VLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLHRHRHHESEDE 647
Query: 431 --INAAITTIFQIHTTQK-LPGDILVFLTGQEEIESMQTKLLEILSKLDNTKFPDLLVVP 487
++ + T +H + PG IL FL G +EI+ +Q +L E L + +K+ L++P
Sbjct: 648 CALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEALG-MHESKY---LILP 703
Query: 488 IYANLPQEQQSKIFEPTPKNCRKVVLATNIAETSLTIDGIKFVVDPGFVKEQSY--SGGV 545
+++N+P Q IF+ P RK+VLATNIAETS+TI+ I VVD G KE+ Y V
Sbjct: 704 VHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKV 763
Query: 546 SKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTKWSYYNELEKVPKPEIXXXXXXXXXXX 605
S L TV SRA+V QR GRAGR G + LF + S ++ PEI
Sbjct: 764 SCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPR-SRLEKMVPFQVPEI-------LRTP 815
Query: 606 XXXXXXXXXXHFP----------MLDKPKTIQLSEALENLYAIGALNSRGAITKVGQVMC 655
H P +D P + EA+ L IG L+ R +T +GQ +
Sbjct: 816 LENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLA 875
Query: 656 DFPCDPEYAK-VIYSSVFEESCNGVLPEIVTIVSMLQESNSIFVPGLNSEEKTKLFGSLM 714
DP AK ++ +++F C + P +V + + ++ S + +K K S
Sbjct: 876 HISTDPRLAKAIVLAAIFR--C--LHPLLVVVSCLTRDPFSSSLQNRAEVDKVKALLSHD 931
Query: 715 QSSDHMLYLWIYEQWEE 731
SDH+ ++ WEE
Sbjct: 932 SGSDHLAFVRAVAGWEE 948
>Hs20336290 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1155
Score = 266 bits (679), Expect = 1e-70
Identities = 186/557 (33%), Positives = 290/557 (51%), Gaps = 54/557 (9%)
Query: 212 EDGRLAEALEEQINKMKSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLP 271
E+ RL+++L E + + + LPV +R IL++I QH ++++ G+TG GKTT++P
Sbjct: 370 EEVRLSQSLLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIP 429
Query: 272 QFLVEDGYTNDGK---C-VVCTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTP 327
Q L+E Y +G+ C V+ TQPRR++A S+A RV+ E+ L + VG+ +R + +
Sbjct: 430 QLLLER-YVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPS 488
Query: 328 DKTILKYTTDGMLLREFLNDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRL 387
L + T G+LLR+ ++P L S +++DE HER ++TD LL LL+G+ + LRL
Sbjct: 489 RGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRL 548
Query: 388 IISSATMNATKFSKFFFDCPIFNVPGRRFPVDIHYT---LQPEGNY-------------- 430
++ SAT + +FS++F CP+ VPG +PV HY L G +
Sbjct: 549 VLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLHRHRHHESEDE 608
Query: 431 --INAAITTIFQIHTTQK-LPGDILVFLTGQEEIESMQTKLLEILSKLDNTKFPDLLVVP 487
++ + T +H + PG IL FL G +EI+ +Q +L E L + +K+ L++P
Sbjct: 609 CALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEALG-MHESKY---LILP 664
Query: 488 IYANLPQEQQSKIFEPTPKNCRKVVLATNIAETSLTIDGIKFVVDPGFVKEQSY--SGGV 545
+++N+P Q IF+ P RK+VLATNIAETS+TI+ I VVD G KE+ Y V
Sbjct: 665 VHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKV 724
Query: 546 SKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTKWSYYNELEKVPKPEIXXXXXXXXXXX 605
S L TV SRA+V QR GRAGR G + LF + S ++ PEI
Sbjct: 725 SCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPR-SRLEKMVPFQVPEI-------LRTP 776
Query: 606 XXXXXXXXXXHFP----------MLDKPKTIQLSEALENLYAIGALNSRGAITKVGQVMC 655
H P +D P + EA+ L IG L+ R +T +GQ +
Sbjct: 777 LENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLA 836
Query: 656 DFPCDPEYAK-VIYSSVFEESCNGVLPEIVTIVSMLQESNSIFVPGLNSEEKTKLFGSLM 714
DP AK ++ +++F C + P +V + + ++ S + +K K S
Sbjct: 837 HISTDPRLAKAIVLAAIFR--C--LHPLLVVVSCLTRDPFSSSLQNRAEVDKVKALLSHD 892
Query: 715 QSSDHMLYLWIYEQWEE 731
SDH+ ++ WEE
Sbjct: 893 SGSDHLAFVRAVAGWEE 909
>SPCC895.09c [A] KOG0920 ATP-dependent RNA helicase A
Length = 1327
Score = 252 bits (644), Expect = 2e-66
Identities = 199/700 (28%), Positives = 345/700 (48%), Gaps = 91/700 (13%)
Query: 234 RKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDGK----CVVCT 289
R+ LP ++ R++I+D+I+ Q++++ GETGSGK+TQ+ QF++ D Y + G+ VVCT
Sbjct: 574 REKLPAWESRRKIMDAIQHSQVVVISGETGSGKSTQVVQFIL-DHYLSSGEKDLQTVVCT 632
Query: 290 QPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLNDPQ 349
QPRR++A S+A RVA E D +GKEVGY++ +++ +T+L++ T G+LLR
Sbjct: 633 QPRRISAISLAERVAFERDTTVGKEVGYSVH-GEKSISKETLLEFCTTGLLLRRIQQHGL 691
Query: 350 --LSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNATKFSKFFFDCP 407
LS+ S +++DE HER++ DILL LL+ ++ +L++I+ SAT+N+ F +F +
Sbjct: 692 GFLSTLSCVVVDEVHERSIENDILLTLLKLVISRIPNLKVILMSATVNSDTFKYYFGNAG 751
Query: 408 IFNVPGRRFPVDIHY--TLQPEGNY------INAAITTIFQI--HTTQKL---------- 447
++ GR FP+ +Y P+ N + ++I H +L
Sbjct: 752 HLHIHGRTFPIKDYYIEDFAPKLNEDDDEEDVPRRKKKEYEIDYHLISRLVSSIDAELGS 811
Query: 448 -PGDILVFLTGQEEIESMQTKLLEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPK 506
G ILVFL G + ++ + EI SK D +KF V+P++A+L +Q + F+ K
Sbjct: 812 SSGSILVFLPG---VSNIARCIREIKSK-DGSKFE---VLPLHASLNTSEQRRCFKTYTK 864
Query: 507 NCRKVVLATNIAETSLTIDGIKFVVDPGFVKEQSYSGGVSKLVTVP---CSRASVDQRAG 563
RK++ ATNIAETS+TID + V+D G VK+ Y LVT SRA+ QR G
Sbjct: 865 --RKIICATNIAETSITIDDVVAVIDSGRVKQIDYD-VERDLVTFKETWASRAACQQRRG 921
Query: 564 RAGRLGPGKCFRLFTKWSYYNELEKVPKPEIXXXXXX-------------XXXXXXXXXX 610
RAGR+ G C++L+T+ + PE+
Sbjct: 922 RAGRVKKGICYKLYTRGFEEKGMLGQTPPEVLRTALSQVCLNVVPLVKRFSSAGNSVNQG 981
Query: 611 XXXXXHFPMLDKPKTIQLSEALENLYAIGALNSRGAITKVGQVMCDFPCDPEYAK-VIYS 669
++D P + AL+ L +GAL +T +G+ + P D + K +++
Sbjct: 982 SIKKFMNSLIDPPNDATVDLALKKLIQVGALTVSEDLTGLGEYLVSLPIDLKLGKLLVFG 1041
Query: 670 SVFEESCNGVLPEIVTIVSMLQESNSIFVPGLNSEEKTKLFGSLMQS-SDHMLYLWIYEQ 728
S+F G L +TI ++L + P L +E ++ Q D + +Y
Sbjct: 1042 SIF-----GYLEPALTITAILSTKS----PFLGDDEAREIRSKQSQGWGDVLADARVYHN 1092
Query: 729 W----EENGYSR--RWCQDFKLQHKTMKRVLRIRQQLWKYCRKQDFLLK---------HD 773
W E G + +WC++ L + T++++ + R +L + + + K
Sbjct: 1093 WLEILETRGVKKTVQWCEEMHLHYTTLQQIRQNRNELSEAAQLLELTTKKLTGNFDWYST 1152
Query: 774 QNLTQLKENMPRSVIEAKIIKC------FISGFPTNIAKLSKQGYTNI--KQDLSVSVHP 825
+NLT L + + + ++KC F++ F ++ + T + + + +HP
Sbjct: 1153 ENLTVL-STLIAAALSPNVVKCVYPDKKFVASFSGSLEMEQEARLTKFYDQNNQRLFIHP 1211
Query: 826 SSVIFNRMKQEGKPMKYILYQSLMLTSKEFIRDCITFDKY 865
SS +F + ++ Y+ + T+K F+R+C + Y
Sbjct: 1212 SSTMFVNSPNASR-CTFVAYEQKVETTKPFLRNCTPINTY 1250
>Hs20336300 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 743
Score = 249 bits (636), Expect = 1e-65
Identities = 197/689 (28%), Positives = 345/689 (49%), Gaps = 53/689 (7%)
Query: 194 PESMIDFTDDTTDILEPVEDGRLA--EALEEQINKMKSIKETRKSLPVYQYRQEILDSIR 251
PES+ D ++L ED L + L K +KE R+ LP+++ + ++++
Sbjct: 19 PESLDSSDGDEEEVLA-CEDLELNPFDGLPYSSRYYKLLKE-REDLPIWKEKYSFMENLL 76
Query: 252 QHQILIVVGETGSGKTTQLPQFLVED----GYTNDGKCVVCTQPRRVAATSIASRVADEM 307
Q+QI+IV G+ GK+ Q+PQ+ E Y + G V+CTQ + +A RVADEM
Sbjct: 77 QNQIVIVSGDAKCGKSAQVPQWCAEYCLSIHYQHGG--VICTQVHKQTVVQLALRVADEM 134
Query: 308 DVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLNDPQLSSYSAIMIDEAHERTLS 367
DV +G EVGY I F++ T ++TIL+Y TD ML RE +++P L SY I++D+ HER+++
Sbjct: 135 DVNIGHEVGYVIPFENCCT-NETILRYCTDDMLQREMMSNPFLGSYGVIILDDIHERSIA 193
Query: 368 TDILLGLLRGILQDRKDLRLIISSATMNATKFSKFFFDCPIFNVPGRRFPVDIHYTLQPE 427
TD+LLGLL+ +L R +L+LII+S+ +K + ++ + P+ V + PV++ Y + +
Sbjct: 194 TDVLLGLLKDVLLARPELKLIINSSPHLISKLNSYYGNVPVIEVKNKH-PVEVVYLSEAQ 252
Query: 428 GNYINAAITTIFQIHTTQKLPGDILVFLTGQEEIESMQTKLLEILSKLDNTKFPDLLVVP 487
+ + + IF+IH + + GDI+VFL +++IE + + + N +L+VVP
Sbjct: 253 KDSFESILRLIFEIHHSGE-KGDIVVFLACEQDIEKVCETVYQ--GSNLNPDLGELVVVP 309
Query: 488 IYANLPQEQQS--KIFEPTPKNC----RKVVLATNIAETSLTIDGIKFVVDPGFVKEQSY 541
+Y P+E+ S K + T K C R+VVL T+ E + + ++FV+D G + + Y
Sbjct: 310 LY---PKEKCSLFKPLDETEKRCQVYQRRVVLTTSSGEFLIWSNSVRFVIDVGVERRKVY 366
Query: 542 SGGV--SKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTKWSYYNELEKVPKPEIXXXXX 599
+ + + LV P S++ + R G GK F L+T+ ++ + E+
Sbjct: 367 NPRIRANSLVMQPISQSQAEIRKQILGSSSSGKFFCLYTEEFASKDMTPLKPAEMQEANL 426
Query: 600 XXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALENLYAIGALNSRGAITKVGQVMCDFPC 659
H +++P L +ALE+L + AL++ G +++ G +M +FP
Sbjct: 427 TSMVLFMKRIDIAGLGHCDFMNRPAPESLMQALEDLDYLAALDNDGNLSEFGIIMSEFPL 486
Query: 660 DPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESNSI-FVP-GLNSEEKTKLFGSLMQSS 717
DP+ +K I +S E C + E++TI +M+ N VP G T L
Sbjct: 487 DPQLSKSILASC-EFDC---VDEVLTIAAMVTAPNCFSHVPHGAEEAALTCWKTFLHPEG 542
Query: 718 DHMLYLWIYEQWEENGYS-------RRWCQDFKLQHKTMKRVLRIRQQLWKYCRKQDFLL 770
DH + IY+ +++ + +WC+D+ L ++ IR +L + ++ + L
Sbjct: 543 DHFTLISIYKAYQDTTLNSSSEYCVEKWCRDYFLNCSALRMADVIRAELLEIIKRIE--L 600
Query: 771 KHDQNLTQLKENMPRSVIEAKIIKCFISGFPTNIAK--LSKQGYTNIKQDLSVSVHPSSV 828
+ + KEN I K +SG+ IA+ Y + +HP S
Sbjct: 601 PYAEPAFGSKEN------TLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQLHPLSG 654
Query: 829 IFNRMKQEGKPMKYILYQSLMLTSKEFIR 857
K +++L+ ++ +IR
Sbjct: 655 YSITKKMP----EWVLFHKFSISENNYIR 679
>Hs22066120 [A] KOG0922 DEAH-box RNA helicase
Length = 516
Score = 247 bits (631), Expect = 5e-65
Identities = 157/456 (34%), Positives = 237/456 (51%), Gaps = 32/456 (7%)
Query: 336 TDGMLLREFLNDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDR-----KDLRLIIS 390
TDG LL+ L DP L+ + I++DEAHERTL+TDIL GLL+ + Q++ + L++++
Sbjct: 2 TDGCLLKHILGDPSLTKFRVIILDEAHERTLTTDILFGLLKKLFQEKSANRKEHLKVVVM 61
Query: 391 SATMNATKFSKFFFDCPIFNVPGRRFPVDIHYT--LQPEGN----YINAAITTIFQIHTT 444
SATM K S FF +CPIF++PGR +PV + + P YI A + IH
Sbjct: 62 SATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLN 121
Query: 445 QKLPGDILVFLTGQEEIESMQTKLLEILSKLD------NTKFPDLLVVPIYANLPQEQQS 498
+ + GDILVFLTGQ EIE L ++ +D +T LL++P Y ++ +QQ
Sbjct: 122 E-MAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTILDGLLILPCYGSMTTDQQR 180
Query: 499 KIFEPTPKNCRKVVLATNIAETSLTIDGIKFVVDPGFVKEQSYSG--GVSKLVTVPCSRA 556
+IF P P RK V++TNI+ TSLTIDG ++VVD GFVK+ +++ G+ L VP S++
Sbjct: 181 RIFLPPPPGIRKCVISTNISATSLTIDGTRYVVDGGFVKQLNHNPRLGLDILEVVPISKS 240
Query: 557 SVDQRAGRAGRLGPGKCFRLFTKWSYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXH 616
QR+GRAGR GKCFR+++K + + PEI
Sbjct: 241 EALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIR 300
Query: 617 FPMLDKPKTIQLSEALENLYAIGALNSRGAITKVGQVMCDFPCDPEYAKVIYSSVFEESC 676
FP LD P + EAL+ LY A++ G +T++G M +FP P + + +
Sbjct: 301 FPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCE 360
Query: 677 NGVLPEIVTIVSMLQESNSIFVPGLNSE-------EKTKLFGSLMQSSDHMLYLWIYEQW 729
+ +LP I +ML N +F+ ++ E +L +D I+EQ
Sbjct: 361 DLLLP----IAAMLSVEN-VFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQC 415
Query: 730 EENGYSRRWCQDFKLQHKTMKRVLRIRQQLWKYCRK 765
+ +G WCQ + + + R+ QL + RK
Sbjct: 416 KSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRK 451
>7302201 [K] KOG0921 Dosage compensation complex subunit MLE
Length = 1293
Score = 233 bits (593), Expect = 1e-60
Identities = 180/618 (29%), Positives = 290/618 (46%), Gaps = 87/618 (14%)
Query: 225 NKMKSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVED------- 277
N+ + E R+ LP+ R EIL +I + ++I+ G TG GKTTQ+ Q++++D
Sbjct: 372 NEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIAQYILDDYICSGQG 431
Query: 278 GYTNDGKCVVCTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTD 337
GY N + TQPRR++A S+A RVA E LG VGY++RF+ + + T
Sbjct: 432 GYAN----IYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAILFCTV 487
Query: 338 GMLLREFLNDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNAT 397
G+LLR+ + L S I++DE HER +++D LL +LR ++ DL +I+ SAT++ T
Sbjct: 488 GVLLRKL--EAGLRGVSHIIVDEIHERDVNSDFLLVILRDMVDTYPDLHVILMSATIDTT 545
Query: 398 KFSKFFFDCPIFNVPGRRFPV--------------------------------------- 418
KFSK+F CP+ VPGR FPV
Sbjct: 546 KFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMTDFVPSAESRRKRKEVEDEEQLLSEDKD 605
Query: 419 --DIHYTLQPEGNY---------------INAAITTIFQIHTTQK-LPGDILVFLTGQEE 460
+I+Y E Y ++ + +H K +PG ILVFL G
Sbjct: 606 EAEINYNKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNL 665
Query: 461 IESMQTKLLEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKNCRKVVLATNIAET 520
I ++ K L+ + +T ++P ++ +P+++Q K+FEP P+ K++L+TNIAET
Sbjct: 666 IFALM-KFLQNTNIFGDTS--QYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAET 722
Query: 521 SLTIDGIKFVVD--PGFVKEQSYSGGVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFT 578
S+TID I FV+D +K + ++ TV S+ +++QR GRAGR+ PG CF L +
Sbjct: 723 SITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCS 782
Query: 579 KWSYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHF--PMLDKPKTIQLSEALENLY 636
+ + + LE PE+ HF L+ P + EA L
Sbjct: 783 R-ARFQALEDNLTPEMFRTPLHEMALTIKLLRLGSIHHFLSKALEPPPVDAVIEAEVLLR 841
Query: 637 AIGALNSRGAITKVGQVMCDFPCDPEYAK-VIYSSVFEESCNGVLPEIVTIVSMLQESNS 695
+ L++ +T +G+++ P +P K ++ +VF C ++ + + S E S
Sbjct: 842 EMRCLDANDELTPLGRLLARLPIEPRLGKMMVLGAVF--GCADLMAIMASYSSTFSEVFS 899
Query: 696 IFVPGLNSEEKTKLFGSLMQSSDHML-----YLWIYEQWEENGYSRRWCQDFKLQHKTMK 750
+ + K S + SDH+ +W E+ R+C LQ TM
Sbjct: 900 LDIGQRRLANHQKAL-SGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKGLQMSTMN 958
Query: 751 RVLRIRQQLWKYCRKQDF 768
+ +QQL ++ F
Sbjct: 959 VIWDAKQQLLDLLQQAGF 976
>Hs4503297 [K] KOG0921 Dosage compensation complex subunit MLE
Length = 1279
Score = 223 bits (568), Expect = 1e-57
Identities = 177/675 (26%), Positives = 317/675 (46%), Gaps = 89/675 (13%)
Query: 222 EQINKMKSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTN 281
EQ + +++I + R+ LPV ++ EIL++I Q+ ++I+ G TG GKTTQ+PQF+++D N
Sbjct: 373 EQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQN 432
Query: 282 D--GKC-VVCTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDG 338
D +C +V TQPRR++A S+A RVA E GK GY++RF+ + + T G
Sbjct: 433 DRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESVLPRPHASIMFCTVG 492
Query: 339 MLLREFLNDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNATK 398
+LLR+ + + S +++DE HER ++T LL +LR ++Q ++R++ SAT++ +
Sbjct: 493 VLLRKL--EAGIRGISHVIVDEIHERDINTSFLLVVLRDVVQAYPEVRIVFMSATIDTSM 550
Query: 399 FSKFFFDCPIFNVPGRRFPVD----------IHYTLQPEG-------------------- 428
F ++FF+CP + R +PV H+ P+
Sbjct: 551 FCEYFFNCPSLKL-WRTYPVQEYFLEDCIQMTHFVPPPKDKKKKDKDDDGGEDDDANCNL 609
Query: 429 --------------NYINAAITTIFQIHTTQK------LPGDILVFLTGQEEIESMQTKL 468
+ +N T I K +PG +LVFL G I +MQ K
Sbjct: 610 ICGDEYGPETRLSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQ-KH 668
Query: 469 LEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKNCRKVVLATNIAETSLTIDGIK 528
LE+ + ++ ++P+++ +P+E+Q K+F+P P KV+L+TNIAETS+TI+ +
Sbjct: 669 LEMNPHFGSHRYQ---ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVV 725
Query: 529 FVVDPGFVKEQSYS--GGVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTKWSYYNEL 586
+V+D K + ++ ++ TV S+ +++QR GRAGR G CF L ++ + + L
Sbjct: 726 YVIDSCKQKVKLFTAHNNMTNYSTVWASKTNLEQRKGRAGRSTAGFCFHLCSR-ARFERL 784
Query: 587 EKVPKPEIXXXXXXXXXXXXXXXXXXXXXHF--PMLDKPKTIQLSEALENLYAIGALNSR 644
E PE+ F ++ P + EA L + AL++
Sbjct: 785 ETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDAN 844
Query: 645 GAITKVGQVMCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESNSIFVPGLNSE 704
+T +G+++ P +P + K++ G + + + + + P +N
Sbjct: 845 DELTPLGRILAKLPIEPRFGKMMIM--------GCIFYVGDAICTIAAATCFPEPFVN-- 894
Query: 705 EKTKLFGSLMQS------SDHMLYLWIYEQWEE-----NGYSRRWCQDFKLQHKTMKRVL 753
+ K G + ++ SDH+ L +++ W++ R+C+ +L T++
Sbjct: 895 -EGKQLGYIHRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTW 953
Query: 754 RIRQQLWKYCRKQDFLLKHDQNLTQLKENMPRSVIEAKIIKCFISGFPTNIAKLSKQGYT 813
+ QL + F D LTQ+ N +I G N+ ++
Sbjct: 954 EAKVQLKEILINSGF--PEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKI 1011
Query: 814 NIKQDLSVSVHPSSV 828
+ + +H SSV
Sbjct: 1012 LTTEGRNALIHKSSV 1026
>YLR419w [A] KOG0920 ATP-dependent RNA helicase A
Length = 1435
Score = 216 bits (551), Expect = 9e-56
Identities = 179/629 (28%), Positives = 300/629 (47%), Gaps = 79/629 (12%)
Query: 201 TDDTTDILEPVEDGRLAEALEEQINKMKSIKETRKSLPVYQYRQEILDSIRQHQILIVVG 260
++DT +L R+ + + KS++ R+ LP ++ ++ I+D I +++++++ G
Sbjct: 574 SEDTLSVLREEYTKRIKSS------EYKSMQLVREQLPAWKKQKVIIDIINKNEVVLITG 627
Query: 261 ETGSGKTTQLPQFLVEDGYTNDGKC----VVCTQPRRVAATSIASRVADEMDVILGKEVG 316
ETGSGK+TQ+ QF+++ G +VCTQPRR++A +A RV+DE V G+EVG
Sbjct: 628 ETGSGKSTQVVQFILDFLQKEKGDFGKTKIVCTQPRRISAIGLAERVSDERCVTCGEEVG 687
Query: 317 YNIRFDDRTTPDKTILKYTTDGMLLREFLNDPQLSSYSAIMIDEAHERTLSTDILLGLLR 376
Y IR ++T T +K+ T G+L+R N + + ++IDE HER++ TD+++ L++
Sbjct: 688 YVIRGVNKTKAS-TRIKFMTTGVLVRLLQNARTMLENTIVVIDEVHERSIDTDLIVTLMK 746
Query: 377 GILQDRKDLRLIISSATMNATKFSKFFFDCPIFNVPGRRFPV----------DIHYTLQP 426
+L + +++++ SAT+N F KFF ++ GR FP+ D+ + ++
Sbjct: 747 NLLHRVRGMKIVLMSATVNVDLFKKFFPGLATCHIEGRTFPITDYFLEDILSDLDFKIKR 806
Query: 427 E----------------GNYINAAITTIF----------------QIHTTQKLP---GDI 451
E Y+ + F +H K G I
Sbjct: 807 EKALSYDDDSVDERNNDDQYLKPRADSKFFTSGQINYDLLCQVVEYVHKRLKAANDNGSI 866
Query: 452 LVFLTGQEEIESMQTKLLEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKNCRKV 511
+VFL G EI K +L+ N D +V+P+++ L E Q ++F+ RKV
Sbjct: 867 IVFLPGVGEI----NKCCNLLANKSNE--ADFMVLPLHSALTPEDQKRVFKKY-HGKRKV 919
Query: 512 VLATNIAETSLTIDGIKFVVDPGFVKEQSYS--GGVSKLVTVPCSRASVDQRAGRAGRLG 569
V++TNIAETS+TID +D G K Y+ +KL+ S+A V QR GRAGR+
Sbjct: 920 VVSTNIAETSITIDDCVATIDTGRAKSMFYNPKDNTTKLIESFISKAEVKQRRGRAGRVR 979
Query: 570 PGKCFRLFTKWSYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHF--PMLDKPKTIQ 627
G ++LF+K Y N++ +P PEI F LD P
Sbjct: 980 EGLSYKLFSKNLYENDMISMPIPEIKRIPLESLYLSVKAMGIKDVKAFLSTALDAPPLPA 1039
Query: 628 LSEALENLYAIGALN-SRGAITKVGQVMCDFP-CDPEYAK-VIYSSVFEESCNGVLPEIV 684
L +A L IG ++ S ++T++GQ + P D ++ K +IY +F G V
Sbjct: 1040 LQKAERILTTIGLVDESDKSLTQLGQFISLMPVMDSKHGKLLIYGILF-----GCTDISV 1094
Query: 685 TIVSMLQESNSIFVPGLNSEEK-TKLFGSLMQSSDHMLYLWI---YEQWEENGYSRRWCQ 740
+VS+L F+ G + EK KL D L I Y + +++ R++ +
Sbjct: 1095 LLVSILGIGVLPFIGGFENREKIKKLLCKYESRGDLFAVLEIVRDYFKIKDSSIKRKYLR 1154
Query: 741 DFKLQHKTMKRVLRIRQQLWKYCRKQDFL 769
D L + + + Q + + FL
Sbjct: 1155 DNLLSYNKINEIKSSTAQYYSILKDVGFL 1183
>SPBC15C4.05 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1428
Score = 214 bits (544), Expect = 6e-55
Identities = 168/571 (29%), Positives = 269/571 (46%), Gaps = 73/571 (12%)
Query: 228 KSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDGKCV- 286
+ K R LP +R+ I+D++ Q+LI+ G+TG GK+TQ+P FL+E+ T +GK V
Sbjct: 622 EKFKVFRNQLPATMFRETIIDAVNNSQLLIISGDTGCGKSTQIPAFLLENS-TKNGKAVK 680
Query: 287 -VCTQPRRVAATSIASRVADEM-----DVILGKEVGYNIRFDDRTTPDKTILKYTTDGML 340
T+PRR++A S+A+RV+ E+ + VGY++R D + TP T L Y T G
Sbjct: 681 IYVTEPRRISAISLANRVSQELGGNPPSARSHELVGYSVRLDSKCTP-LTPLTYVTTGTF 739
Query: 341 LREFLNDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNATKFS 400
LR ++ S + ++IDE HER++ +D+LL + +L+ L++II SAT+NA KF
Sbjct: 740 LRLLEVGNEIESVTHLIIDEVHERSIDSDLLLIHVLHLLKQHPHLKIIIMSATLNAEKFQ 799
Query: 401 KFFFDCPIFNVPGRRFPVDIHY---TLQPEGN---YINAAITTIFQ----------IHTT 444
+F + +PG+ +PV Y L GN + NAA + + +
Sbjct: 800 LYFEGSNLITIPGKTYPVHRFYLEDILSQFGNDKSFGNAAGQDVIEEDDYETDQQDASIS 859
Query: 445 QKLPGDILVFLT------GQEEIE-SMQTKLLEILSKLDNTKFPDLLVV----------- 486
K D +V + ++ I + LL+ + + KF ++V
Sbjct: 860 NKSAEDAIVEMNLIPAWYNEKAINYGLIVYLLKYIFTEGDPKFSKCVLVFLPGISEILRV 919
Query: 487 -------PIYAN------------LPQEQQSKIFEPTPKNCRKVVLATNIAETSLTIDGI 527
P++ N L QQ +F PK CRK+VL+TNIAET +TI +
Sbjct: 920 KSLIEDMPMFRNHRKFCIYMLHSTLSSAQQQSVFNIPPKGCRKIVLSTNIAETGVTIPDV 979
Query: 528 KFVVDPGFVKEQSYSG--GVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTKWSYYNE 585
V+D G +E Y+ +S+L S+A+ QR+GRAGR+ G C+ LF+K+ + +
Sbjct: 980 TCVIDTGVHREMRYNSRRHLSRLTDTFVSKANAKQRSGRAGRVQEGICYHLFSKFKHDTQ 1039
Query: 586 LEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHF--PMLDKPKTIQLSEALENLYAIGALNS 643
PEI LD P + + ALE L+ +GAL+
Sbjct: 1040 FLSYQTPEILRLNLQEVVLRVKMCQMGDVQDVLGKALDPPSSTNIIRALEKLHQVGALSE 1099
Query: 644 RGAITKVGQVMCDFPCDPEYAKVIYSSVFEESCNGV--LPEIVTIVSMLQESNSIFVPGL 701
+TK+G+ + P D K++ F + + + ++TI S ++S V
Sbjct: 1100 NEKLTKLGKFLSQLPVDANLGKILVLGCFYKCVDAASSIVAMLTIGSPFRKS----VDNE 1155
Query: 702 NSEEKTKL-FGSLMQSSDHMLYLWIYEQWEE 731
S K +L F SD +L + Y W E
Sbjct: 1156 FSANKARLSFAKENTRSDLVLMYYAYCAWRE 1186
>7293336 [A] KOG0920 ATP-dependent RNA helicase A
Length = 976
Score = 209 bits (533), Expect = 1e-53
Identities = 151/519 (29%), Positives = 251/519 (48%), Gaps = 64/519 (12%)
Query: 206 DILEPVEDGRLAEAL--EEQINKMKSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETG 263
DI P G + + L Q N+ ++I+ R+SLP+Y+ R+ IL+ +++ Q+LI+ G TG
Sbjct: 176 DIRLPSNFGLVGQRLIPPPQSNRNRNIQHERRSLPIYKQRESILNVLQRDQVLIIKGATG 235
Query: 264 SGKTTQLPQFLVEDGYTNDGKC-VVCTQPRRVAATSIASRVADEMDVILGKEVGYNIRFD 322
SGK+TQLPQ+++E + +V +QPRR+AA S++ R++ E G VGYNIR
Sbjct: 236 SGKSTQLPQYILEWAAEHRAPVRIVVSQPRRIAAISVSERISKERGEAPGTTVGYNIRM- 294
Query: 323 DRTTPDKTILKYTTDGMLLREFLNDPQ--LSSYSAIMIDEAHERTLSTDILLGLLRGILQ 380
+R T+L TT G LLR D + + + ++IDEAHER L TD LL + LQ
Sbjct: 295 NRQCSSNTVLMLTTSGCLLRALAMDKKSFFKNTTHLIIDEAHERDLDTDFLLLATKLELQ 354
Query: 381 DRKDLRLIISSATMNATKFSKFFFDCPIFNVPGRRFPVDIHYT---------LQPE---- 427
LRL++ SATM+ S +F + +V GR F V I++ + P
Sbjct: 355 KNPHLRLVLMSATMDLEALSNYFGGGTVMDVEGRSFEVSIYHLEDILSKTGYMHPRMEKF 414
Query: 428 -------------------GNYI------NAAITTIFQIHTTQKLPGDILVFLTGQEEIE 462
GN I N I ++ ++ Q G ++V+L G ++
Sbjct: 415 LGKPTGKETPSELLAAYYGGNTIVHPDIDNDLIVSLLELLLRQGDAGAVIVYLPGYSDMT 474
Query: 463 SMQTKLLEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKNCRKVVLATNIAETSL 522
S+ +L L + + ++ +++ + +Q K+F P K++L+TNI +TS+
Sbjct: 475 SLLARLESSLPR------EQITIILLHSQVDNSEQRKVFRTYPGVRLKIILSTNIGQTSI 528
Query: 523 TIDGIKFVVDPGFVKEQSYSGGV--SKLVTVPCSRASVDQRAGRAGRLGPGKCFRLF--- 577
TI + +V+D G K ++Y + S+L S+A QRAGRAGR+ G C+RL+
Sbjct: 529 TIPDLLYVIDTGLAKMKTYDSTIDASQLTLTWISQADAKQRAGRAGRVCHGNCYRLYDND 588
Query: 578 --TKWSYYN--ELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALE 633
+ + Y E+ + EI LD P + ++
Sbjct: 589 RMARMNLYTIPEIMRRTLDEICLLTKLAAPDKKIENFLALA-----LDTPPKDAVMQSCS 643
Query: 634 NLYAIGALNSRGAITKVGQVMCDFPCDPEYAKVIYSSVF 672
L +G L+ R +T +G ++ + P + K + S++
Sbjct: 644 RLKLLGVLDERDEVTPLGHIVAELPLGVQIGKCLVYSIY 682
>CE18218 [K] KOG0921 Dosage compensation complex subunit MLE
Length = 1402
Score = 208 bits (530), Expect = 3e-53
Identities = 179/644 (27%), Positives = 296/644 (45%), Gaps = 115/644 (17%)
Query: 212 EDGRLAEALEEQINKMKSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLP 271
ED + EAL++ I R LPV QYR+ I+ ++ ++++ ++ GETG GK+TQ+
Sbjct: 464 EDFKRGEALDK-------ITAQRGELPVAQYRENIVQTVAENRVTLIKGETGCGKSTQVA 516
Query: 272 QFLVEDGYTNDGKC---VVCTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPD 328
QFL+E N V +QPRR++A S+A RVA+E +G+ GYN+RFD T
Sbjct: 517 QFLLESFLENSNGASFNAVVSQPRRISAISLAERVANERGEEVGETCGYNVRFDSATPRP 576
Query: 329 KTILKYTTDGMLLREFLNDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLI 388
+ + T G+LLR N L S ++IDE HER + TD +L +LR ++ +DLR++
Sbjct: 577 YGSIMFCTVGVLLRMMENG--LRGISHVIIDEIHERDVDTDFVLIVLREMISTYRDLRVV 634
Query: 389 ISSATMNATKFSKFFFD------CPIFNVPGRRFPV------DIHYTLQ----------- 425
+ SAT++ F+ FF P+ + GR FPV DI + LQ
Sbjct: 635 LMSATIDTDLFTNFFSSIPDVGPTPVITMHGRTFPVQSFYLEDILHNLQHMPEEPDQKKR 694
Query: 426 ----------PEGN----------------YINAAITTIFQIHTTQKLP----------- 448
EG+ IN ++ T + + +P
Sbjct: 695 KKGGPPPPDDDEGDEEVDDKGRNMNILTDPSINESLKTAMSRISEKDIPFGVIEAILNDI 754
Query: 449 ------GDILVFLTGQEEIESMQTKLLEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFE 502
G +LVFL G EI ++ +LLE K+ ++P+++ L ++Q K+F
Sbjct: 755 ASRGVDGAVLVFLPGWAEIMTLCNRLLEHQEFGQANKYE---ILPLHSQLTSQEQRKVFN 811
Query: 503 PTPKNCRKVVLATNIAETSLTIDGIKFVVDPGFVKEQSY--SGGVSKLVTVPCSRASVDQ 560
P RK++++TNIAETS+TID + +V+D KE+ Y + + TV S+ +V Q
Sbjct: 812 HYPGK-RKIIVSTNIAETSITIDDVVYVIDSCKAKERMYTSNNNMVHFATVWASKTNVIQ 870
Query: 561 RAGRAGRLGPGKCFRLFTKWSY-------YNELEKVPKPEIXXXXXXXXXXXXXXXXXXX 613
R GRAGR+ G F L +K + E+ ++P +I
Sbjct: 871 RRGRAGRVRAGYAFHLCSKMRFEALDDHGTAEMLRIPLHQIALTIKLLRLGSVGEFLGKA 930
Query: 614 XXHFPMLDKPKTIQLSEALENLYAIGALNSRGAITKVGQVMCDFPCDPEYAKVIYSSVFE 673
L P + E+ L A+GAL+ +T +G+++ P +P AKV+
Sbjct: 931 ------LQPPPYDMVVESEAVLQAMGALDRNLELTSLGKMLARMPIEPVIAKVLILGT-A 983
Query: 674 ESCNGVLPEIVTIVSMLQESNSIFVPGLNSEEKTKLFGSLM-----QSSDHMLYLWIYEQ 728
V+ ++ + +S + FVP + ++L G+ + SDH+ + + +
Sbjct: 984 LGAGSVMCDVASAMSF----PTPFVP--REKHHSRLSGTQRKFAGNKFSDHVAIVSVIQG 1037
Query: 729 WEE------NGYSRRWCQDFKLQHKTMKRVLRIRQQLWKYCRKQ 766
+ E + R +C+ + L + +K R+QL R Q
Sbjct: 1038 YREAVQMGASAAEREFCERYSLSNPVLKMTDGARRQLIDVLRNQ 1081
>YMR128w [AJ] KOG0926 DEAH-box RNA helicase
Length = 1267
Score = 202 bits (515), Expect = 1e-51
Identities = 144/424 (33%), Positives = 223/424 (51%), Gaps = 39/424 (9%)
Query: 96 KRYGWNNLTVSEREEISLKRELLKLLNETGKDYAENGDTSGFKMQ------DEVASKKQL 149
K+Y W E + K + + + D E KM +EV S
Sbjct: 244 KKYNWRQRVEMEELKKHGKEDEMDFDTTSEDDDEEEDQEEEDKMHPSENPLEEVESADSE 303
Query: 150 LTAKLRNKTDRVN----WEEEQMKKSVIKADADEIKVKDSDNYEFVFDPESMIDFTDDTT 205
++ ++ D N W +++KK + D + + + +Y+ + E D D
Sbjct: 304 TGSEKFDQNDVANEFKDWANQEIKK-LEGRDQELVTPTLNIDYKPIIRKE---DLDDGLQ 359
Query: 206 DILEPVEDGRLAEALEEQINKMKSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSG 265
+ P+ + +A ++++ I++ R LPV+ +I+++I + ++I+ GETGSG
Sbjct: 360 EAYVPINENSTRKAFYVEVSRSDEIQKARIQLPVFGEEHKIMEAIHHNDVVIICGETGSG 419
Query: 266 KTTQLPQFLVEDGYTNDGK-----CVVCTQPRRVAATSIASRVADEMDVILGKEVGYNIR 320
KTTQ+PQFL E G+ + V TQPRRVAA S+A RVA+E+ G +VGY IR
Sbjct: 420 KTTQVPQFLYEAGFGAEDSPDYPGMVGITQPRRVAAVSMAERVANELGDH-GHKVGYQIR 478
Query: 321 FDDRTTPDKTILKYTTDGMLLREFLNDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQ 380
FD T + T +K+ TDG+LLRE ++D +L+ YS+I+IDEAHER ++TDIL+G+L ++
Sbjct: 479 FDS-TAKEDTKVKFMTDGVLLREMMHDFKLTKYSSIIIDEAHERNINTDILIGMLSRCVR 537
Query: 381 -----------DRKDLRLIISSATMNATKFSK----FFFDCPIFNVPGRRFPVDIHYTLQ 425
+ K L+LII SAT+ + FS+ F P+ V R+FPV IH+ +
Sbjct: 538 LRAKLHKENPIEHKKLKLIIMSATLRVSDFSENKTLFPIAPPVLQVDARQFPVSIHFNRR 597
Query: 426 PEGNYINAAITTIFQIHTTQKL-PGDILVFLTGQEEIESMQTKLLEILSKLDNTKFPDLL 484
NY + A +IH QKL PG ILVFLTGQ+EI M +L + N+K+ L
Sbjct: 598 TAFNYTDEAFRKTCKIH--QKLPPGAILVFLTGQQEITHMVKRLRKEFPFKKNSKYNKDL 655
Query: 485 VVPI 488
P+
Sbjct: 656 ETPV 659
Score = 153 bits (386), Expect = 1e-36
Identities = 130/469 (27%), Positives = 216/469 (45%), Gaps = 88/469 (18%)
Query: 457 GQEEIESMQTKLLEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKNCRKVVLATN 516
G++E + + E+L++ P L V+P+Y+ LP ++Q ++F+ P+ R ++ATN
Sbjct: 704 GEDEEDEEEEGFEEVLTEGQTANDP-LYVLPLYSLLPTKEQMRVFQKPPQGSRLCIVATN 762
Query: 517 IAETSLTIDGIKFVVDPGFVKEQSY--SGGVSKLVTVPCSRASVDQRAGRAGRLGPGKCF 574
+AETSLTI G+++VVD G KE+ Y S GV S+AS +QR+GRAGR GPG C+
Sbjct: 763 VAETSLTIPGVRYVVDSGRSKERKYNESNGVQSFEVGWVSKASANQRSGRAGRTGPGHCY 822
Query: 575 RLFTKWSYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALEN 634
RL++ + ++ E+ KPEI +FP P + LS+A++
Sbjct: 823 RLYSSAVFEHDFEQFSKPEILRMPVESIVLQMKSMAIHNIINFPFPTPPDRVALSKAIQL 882
Query: 635 LYAIGALNSRGAITKVGQVMCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESN 694
L +GAL+++ IT+ G+ M FP P ++K++ S E++C LP IV IVS L +
Sbjct: 883 LQYLGALDNKEMITEDGKKMSLFPLSPRFSKMLLVS-DEKAC---LPYIVAIVSALSVGD 938
Query: 695 SIF------------------------------VPGLNSEEKTKL----------FGSLM 714
PG++ E K +L F L
Sbjct: 939 PFINEFELGINEISRKPNPDENLDDKIREHDESTPGMDPELKKELRSKFYKSRSQFSKLD 998
Query: 715 QSSDHMLYLWIYEQWEENGYSRR--WCQDFKLQHKTMKRVLRIRQQLWKYCRKQDFLLKH 772
+ SD L + + ++ + + L+ K M+ ++++R+QL +
Sbjct: 999 KFSDVFRLLSVVSAMDYVPKEQKEIFMKKNFLRGKLMEEIVKLRKQLMYIIKSN----TS 1054
Query: 773 DQNLT------QLKENMPRSVIEAKIIKCFISG-------------FPTNIAKLSKQGYT 813
+N+ LK ++P SVI+ K++K I FP + ++
Sbjct: 1055 KENIAVVIRNEDLKSDIP-SVIQIKLLKQMICAGFVDHVAVRADVLFPDDAKITNRTSII 1113
Query: 814 NIK------------QDLSVSVHPSSVIFNRMKQEGKPMKYILYQSLML 850
NI +D V +HP+S++ N + P KY+LY SL L
Sbjct: 1114 NIPYIPVLATRTPNIEDCFVYIHPTSILNNLGEM---PPKYMLYYSLHL 1159
>At4g18470_2 [A] KOG0922 DEAH-box RNA helicase
Length = 547
Score = 200 bits (509), Expect = 7e-51
Identities = 101/184 (54%), Positives = 133/184 (71%), Gaps = 9/184 (4%)
Query: 229 SIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDGKCVVC 288
+I++ R+ LPVY+YR EIL + H I+VGETGSGKTTQ+PQ+L E G+ G+ + C
Sbjct: 6 NIEKQRQRLPVYKYRTEILYLVENHATTIIVGETGSGKTTQIPQYLKEAGWAEGGRVIAC 65
Query: 289 TQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLNDP 348
TQPRR+A ++++RVA+EM V LG+EVGY IRF+D TT T +K+ TDG+L+RE + DP
Sbjct: 66 TQPRRLAVQAVSARVAEEMGVNLGEEVGYTIRFEDHTTSGVTSVKFLTDGVLIREMMEDP 125
Query: 349 QLSSYSAIMIDEAHERTLSTDILLGLLRGILQD---------RKDLRLIISSATMNATKF 399
L+ YS IMIDEAHER++STDILLGLL+ + Q R +LRLIISSAT+ A
Sbjct: 126 LLTKYSVIMIDEAHERSISTDILLGLLKKVSQSNTVLIIQRRRPELRLIISSATIEAKTM 185
Query: 400 SKFF 403
S FF
Sbjct: 186 SNFF 189
>ECU04g0250 [A] KOG0922 DEAH-box RNA helicase
Length = 608
Score = 199 bits (506), Expect = 2e-50
Identities = 185/664 (27%), Positives = 303/664 (44%), Gaps = 113/664 (17%)
Query: 236 SLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDGKCVVCTQPRRVA 295
+LP+ + + +IL ++ + ++ I+ G TG GK+T +P +L+ + + VV +PRR+A
Sbjct: 7 NLPIEECKDKILSTVERSKVCIIKGPTGCGKSTYIP-YLLSSCFPSSRIAVV--EPRRIA 63
Query: 296 ATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLNDPQLSSYSA 355
TS+ ++ M+ VGY +RF+ D + YT DG FLN+ S +
Sbjct: 64 VTSLHKTLSSAME-----GVGYKMRFNKSVGKDTRTIIYT-DG----SFLNEIGESEFDY 113
Query: 356 IMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNATKFSKFFFDCPIFNVPGRR 415
I++DE HER++ TDI+LGLLR +++ K ++I+ SAT++ K S++F + ++PG
Sbjct: 114 IIVDEVHERSVRTDIILGLLRSNIKNIKG-KVILMSATVDTAKVSRYF-KADVLDIPGAG 171
Query: 416 FPVDIHYTLQPEGNYINAAITTIFQIHTTQKLPGD--------ILVFLTGQEEIESMQTK 467
PV I Y + +YI + I +I +++ D ILVFL G+E+I +
Sbjct: 172 HPVKIEYLPECTSDYIVESYCIIKRIALSKEDSWDGFEPENKGILVFLPGEEDINDLYGL 231
Query: 468 LLEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKNCRKVVLATNIAETSLTIDGI 527
L K P + V I++ L ++QSKI+EP + RKV+L+TNI ETSLTI GI
Sbjct: 232 L---------RKLPAIRVYKIFSALSDKEQSKIYEPC--SLRKVILSTNICETSLTIPGI 280
Query: 528 KFVVDPGFVKEQSYSGGVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTKWSYYNELE 587
+V+D G K + Y +S L S+ S DQR GR R GPG C+RL+T+ + Y L
Sbjct: 281 GYVLDSGLQKVKIYD-QMSHLGIWSISKESADQRLGRCNRTGPGTCYRLYTE-NMYGTLP 338
Query: 588 KVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALENLYAIG-------- 639
PEI F LD P AL L G
Sbjct: 339 LQQSPEI-CRSDLSQAFLLLLSYRKNPLRFEFLDYPTRANAISALSFLLEKGCISISSIR 397
Query: 640 -----ALNS--------------------RGAITKVGQVMCDFPCDPEYAKVIYSSVFEE 674
LNS R IT+ G+ + P D + S+ +
Sbjct: 398 EDLRCCLNSSLVRHDGAVPDPTELSLDDIRLKITRYGRTVLRHPFDVHLSHFYQQSLGRD 457
Query: 675 SCNGVLPEIVTIVSMLQESNSIFVPGLNSEEKTKLFGSLMQSSDHMLYLWIYEQWEENGY 734
G L I +VS++ + + F+ N +KT D + ++E + E+
Sbjct: 458 V--GYLASI--LVSLVSQDSCNFLKYKNKSQKT----------DIEFLVCLFEGYLESED 503
Query: 735 SRRWCQDFKLQHKTMKRVLRIRQQLWKYCRKQDFLLKHDQNLTQLKENMPRSVIEAKIIK 794
+++C ++ K M+ RI L + K D ++ ++ +
Sbjct: 504 KKQYCAKHEVGIKHMEIAKRIFSALNR---------KKDGDIEMIE-------------R 541
Query: 795 CFISGFPTNIAKLSKQG-YTNIKQDLSVSVHPSSVIFNRMKQEGKPMKYILYQSLMLTSK 853
F + N+ + K G Y +++ V +HPSS F R ++I++ + T+K
Sbjct: 542 VFSLAYQHNLCERMKDGSYKHLRGGSVVWIHPSSCFFKRKD------RFIVFVDIFHTTK 595
Query: 854 EFIR 857
+ R
Sbjct: 596 AYAR 599
>7290296 [AJ] KOG0926 DEAH-box RNA helicase
Length = 1192
Score = 195 bits (496), Expect = 2e-49
Identities = 148/439 (33%), Positives = 230/439 (51%), Gaps = 54/439 (12%)
Query: 64 IKSMVEQKVLTKRQRSQLHWLVKDLQILEDDIKRYGWNNLTVSEREEISLKR------EL 117
++++V++K K R+QL + +QI E+++++Y ++S+ + + LKR L
Sbjct: 77 LQAIVDKKK-KKEGRAQLLGDLAAVQIPEEELQQY----TSISQVQTVGLKRLPTLDEYL 131
Query: 118 LKLLNETGKDYAENGDTSGFKMQDEVASKKQLLTAKLRNKTDRVNWEEEQMKK----SVI 173
K + AE SG ++ SK++LL V EEE K +VI
Sbjct: 132 AKKKERQAQVLAEKSSASGLRVNAIKGSKRKLL----------VEEEEELQAKRKNPNVI 181
Query: 174 KADADEIKVKDSDNYEFVFDPESMIDFTDDTTDIL---------------EPVEDGRLAE 218
+ D+ SD + +S I EP + +
Sbjct: 182 SVEEDDEDSSSSDEDDEEAPAQSAPIAIPTPVSIAPPQIAVKPPIKKLKPEPNPPACIHQ 241
Query: 219 ALEEQINKMKSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDG 278
+ +++ ++ R LP+ Q+++++I ++ I+IV GETGSGKTTQLPQFL E G
Sbjct: 242 TVYVPVHRTTEVQNARLRLPILAEEQQVMETINENPIVIVAGETGSGKTTQLPQFLYEAG 301
Query: 279 YTNDGKCVVCTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDG 338
Y K + T+PRRVAA +++ RVA EM+ + EV Y IRF+ TP T +K+ TDG
Sbjct: 302 YAQH-KMIGVTEPRRVAAIAMSKRVAHEMN-LPESEVSYLIRFEGNVTP-ATRIKFMTDG 358
Query: 339 MLLREFLNDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDR----KDLRLIISSATM 394
+LL+E D LS YS I++DEAHER++ TDIL+GLL I+ R + L+LII SAT+
Sbjct: 359 VLLKEIETDFLLSKYSVIILDEAHERSVYTDILVGLLSRIVPLRHKRGQPLKLIIMSATL 418
Query: 395 NATKFSK----FFFDCPIFNVPGRRFPVDIHYTLQPEGNYINAAITTIFQIHTTQKLP-G 449
+ F++ F P+ V R+FPV IH+ + +Y+ A +IH KLP G
Sbjct: 419 RVSDFTENTRLFKIPPPLLKVEARQFPVTIHFQKRTPDDYVAEAYRKTLKIH--NKLPEG 476
Query: 450 DILVFLTGQEEIESMQTKL 468
IL+F+TGQ+E+ + KL
Sbjct: 477 GILIFVTGQQEVNQLVRKL 495
Score = 130 bits (326), Expect = 1e-29
Identities = 127/452 (28%), Positives = 192/452 (42%), Gaps = 62/452 (13%)
Query: 469 LEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKNCRKVVLATNIAETSLTIDGIK 528
LE S + + + L V+P+Y+ L E+Q++IF P P CR V++TN+AETSLTI IK
Sbjct: 603 LEDESGMGSGQRQPLWVLPLYSLLSSEKQNRIFLPVPDGCRLCVVSTNVAETSLTIPHIK 662
Query: 529 FVVDPGFVKEQSYS--GGVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTKWSYYNEL 586
+VVD G K + Y GVS V S+AS DQRAGRAGR+ G C+RL++ Y +
Sbjct: 663 YVVDCGRQKTRLYDKLTGVSAFVVTYTSKASADQRAGRAGRISAGHCYRLYSSAVYNDCF 722
Query: 587 EKVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALENLYAIGAL----- 641
E +P+I HFP P +QL A L +GAL
Sbjct: 723 EDFSQPDIQKKPVEDLMLQMRCMGIDRVVHFPFPSPPDQVQLQAAERRLIVLGALEVAKT 782
Query: 642 ---NSRGAITKVGQVMCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESNSIFV 698
+ A+T++G V+ FP P + K++ S +LP V +V+ L +
Sbjct: 783 ENTDLPPAVTRLGHVISRFPVAPRFGKMLALS----HQQNLLPYTVCLVAALSVQEVLIE 838
Query: 699 PGLNSEEKT--------------KLFGSLMQSSDHMLYLWIYEQWEENGYSRR---WCQD 741
G+ +E G+ D M+ L E G R +C
Sbjct: 839 TGVQRDEDVAPGANRFHRKRQSWAASGNYQLLGDPMVLLRAVGAAEYAGSQGRLPEFCAA 898
Query: 742 FKLQHKTMKRVLRIRQQLWKYCRKQDFLLKHDQNLTQLKENMPRSVIEAKIIK-CFISGF 800
L+ K M V ++R QL + L D L E P + +A+ ++ ++G
Sbjct: 899 NGLRQKAMSEVRKLRVQL----TNEINLNVSDVELGVDPELKPPTDAQARFLRQILLAGM 954
Query: 801 PTNIA--------------KLSKQGYTNIKQDLSVSVHPSSVIFNRMKQEGKPMKYILYQ 846
+A + K Y + +H SSV+ K ++++YQ
Sbjct: 955 GDRVARKVPLADIADKEERRRLKYAYNCADMEEPAFLHVSSVL------RQKAPEWVIYQ 1008
Query: 847 SLML-----TSKEFIRDCITFDKYEWLTETMP 873
++K FIR IT + EWL +P
Sbjct: 1009 EAYELQNGDSTKMFIRG-ITAIEPEWLLLYVP 1039
>7300065 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1434
Score = 195 bits (495), Expect = 3e-49
Identities = 188/708 (26%), Positives = 312/708 (43%), Gaps = 96/708 (13%)
Query: 204 TTDILEPVEDGRLAEAL--EEQINKMKSIKETRKSLPVYQYRQEILDSIRQHQILIVVGE 261
T D L+ ++G E +E K + K+L +Y R+EIL +I H ++I+ GE
Sbjct: 80 TLDDLDTDDEGEETEIRRDDEYYKKFRFNLNRDKNLSIYAKREEILAAINAHPVVIIKGE 139
Query: 262 TGSGKTTQLPQFLVEDGYTNDGKC-VVCTQPRRVAATSIASRVADEMDVILGKEVGYNIR 320
TG GKTTQ+PQ+++++ Y + C +V TQPRR+AA SIA+RV E + + +
Sbjct: 140 TGCGKTTQVPQYILDEAYKSGKYCNIVVTQPRRIAAISIANRVCQEREWQQNTVCSFQVG 199
Query: 321 FDDRTTPDKTILKYTTDGMLLREFLNDPQLSSYSAIMIDEAHERTLSTDILLGLLRGIL- 379
+ + T L Y T G+LL +N+ L+ Y+ I++DE HER + D LL ++R +L
Sbjct: 200 LHRPNSLEDTRLLYCTTGVLLNNLINNKTLTHYTHIVLDEVHERDQNMDFLLIVVRRLLA 259
Query: 380 QDRKDLRLIISSATMNATKFSKFFFDC----PIFNVPGRR-----------------FPV 418
+ + +++I+ SAT++A + S +F P+ RR
Sbjct: 260 TNSRHVKIILMSATIDAKELSDYFTTTNSIPPVITTNHRRKHSIEKFYRDQLGSIIWNEE 319
Query: 419 DIHYTLQPEGNY--INAAITTIFQIHTTQKLP--------------GDILVFLTGQEEIE 462
D+ + PE N AA+ I I ++ G +L+FL G EI+
Sbjct: 320 DVGHQQVPEINKHGYRAAVKIIVIIDNMERKAAIQSRQSYDEALRYGAVLIFLPGIYEID 379
Query: 463 SMQTKLLEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKNCRKVVLATNIAETSL 522
+M L +L N K + +V ++ + E Q +F P P RK++L TNIAE+S+
Sbjct: 380 TMAENLTCMLENDPNIK---VSIVRCFSLMTPENQRDVFNPPPPGFRKIILTTNIAESSI 436
Query: 523 TIDGIKFVVD--PGFVKEQSYSGGVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTKW 580
T+ + +V+D VK + S L S+A+ QRAGR GRL G+ +R+ K
Sbjct: 437 TVPDVSYVIDFCLAKVKVTDTASSFSSLRLTWASKANCRQRAGRVGRLRSGRVYRMVNKH 496
Query: 581 SYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHF--PMLDKPKTIQLSEALENLYAI 638
Y E+ + PE+ L P + + L +
Sbjct: 497 FYQREMPEFGIPEMLRLPLQNSVLKAKVLNMGSPVEILALALSPPNLSDIHNTILLLKEV 556
Query: 639 GALNSR---------GAITKVGQVMCDFPCDPEYAK-VIYSSVFEESCNGVLPEIVTIVS 688
GAL G +T G +M P D ++ +I +F +L E + I +
Sbjct: 557 GALYLTVDGIYDPLDGDLTYWGTIMSRLPLDTRQSRLIILGYIF-----NMLEEAIIIAA 611
Query: 689 MLQESNSIFVPGLNSEE--KTKLFGSLMQ-------SSDHMLYLW----IYEQWEENGYS 735
L PGL + E +++L S S ++ +W Y ENG+
Sbjct: 612 GLS------TPGLFAHEGGRSQLGDSFWMHYIFSDGSGSDLVAIWRVYLTYLNIVENGHD 665
Query: 736 R----RWCQDFKLQHKTMKRVLRIRQQLWKYCRKQDFLLKHDQNLTQLKENMPRSVIEAK 791
+ RW + F + +++K + + Q+L C L+ N Q+ ++ +++
Sbjct: 666 QESAIRWAKRFHVSLRSLKEIHLLVQELRVRCTHLG-LIPFPVNPNQMMDDREKAI---- 720
Query: 792 IIKCFISG-FPTNIAKLSKQGYT----NIKQDLSVSVHPSSVIFNRMK 834
++K I+G F N SK+ NI Q +S +V F K
Sbjct: 721 MLKVIIAGAFYPNYFTRSKESCADTDRNIYQTISGHDPCRTVYFTNFK 768
>7292962 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase
Length = 676
Score = 192 bits (487), Expect = 2e-48
Identities = 109/231 (47%), Positives = 151/231 (65%), Gaps = 23/231 (9%)
Query: 153 KLRNKTDRVNWEEEQMKKSVIKADADEIKVKDSDNYEFVFDPESMIDFTDDTTDILEPVE 212
K R K + +WE K I + +D D+ F D D + +
Sbjct: 457 KERRKAQKKHWELSGTKLGNIMGVQ---RPQDEDDMRF-----------DKEKDKADYRK 502
Query: 213 DGRLAEALEEQ-------INKMKSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSG 265
D + A+ + +Q ++ K+I E R+ LPV+ RQE+L+ IR++ ++I+VGETGSG
Sbjct: 503 DQKFADHMRDQDTGGKSDFSRKKTISEQRRFLPVFASRQELLNVIRENSVIIIVGETGSG 562
Query: 266 KTTQLPQFLVEDGYTNDGKCVVCTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRT 325
KTTQL Q+L EDGY+ G + CTQPRRVAA S+A RV+DEMD LG++VGY IRF+D T
Sbjct: 563 KTTQLTQYLHEDGYSKRGM-IGCTQPRRVAAMSVAKRVSDEMDTQLGEDVGYAIRFEDCT 621
Query: 326 TPDKTILKYTTDGMLLREFLNDPQLSSYSAIMIDEAHERTLSTDILLGLLR 376
+ ++T++KY TDG+LLRE L DP+L SYSAI++DEAHER+LSTD+L GLLR
Sbjct: 622 S-ERTVIKYMTDGILLRESLRDPELDSYSAIIMDEAHERSLSTDVLFGLLR 671
>At1g33390 [AJ] KOG0926 DEAH-box RNA helicase
Length = 1237
Score = 190 bits (482), Expect = 9e-48
Identities = 151/506 (29%), Positives = 254/506 (49%), Gaps = 50/506 (9%)
Query: 5 GDENGTKLTGSGQRRAKRTYESIESVNANTNSFSPADQVLDSSPDPSLKDGKAHY-SVNS 63
GD+ + +++ K + + + +N+N N+ S + + + + K+ +
Sbjct: 6 GDDCNLDVMPPRKKKNKGSNKMQDKLNSNNNTGSKKSRKRKLNSNVNTVACKSQKRKLKK 65
Query: 64 IKSMVEQKVLTKRQRSQL--HWLVKDLQILEDDIKRYGWNNLTVSEREEISLKRELLKLL 121
++ E+++L + L + + +D+ L K G + T E+ +++ +
Sbjct: 66 LEEDKEKEILFSKTAELLDKYKISEDVSSLLQSSKVIG-RSATKLEKRRRAMQLSKAGVE 124
Query: 122 NETGKDYAENGDTSGFKMQDEVASKKQLLTAKLRNKTDRVNWEEEQMKKSVIKADADEIK 181
E + E D DE + + + TD E+Q+ + + A+E
Sbjct: 125 TEHSDESVEQNDNDDDSCMDEPTTPEHVEIETPTFVTD----SEQQLVHADLMISAEESS 180
Query: 182 VK-DSDNYEFVFDPESMIDFTDDTTDILEPVED----GRLAEALEEQINKMKSIKETRKS 236
K + D+ + + D +D+ D L ED G A +++ ++ETRK
Sbjct: 181 SKLEVDDTVDMIPLTTCRDDDEDSMDGLIENEDVTVQGPRVPAFVVHVSRPAEVEETRKD 240
Query: 237 LPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGY-----TNDGKCVVCTQP 291
LP+ QEI+++I +H +I+ G+TG GKTTQ+PQFL E G+ ++ + TQP
Sbjct: 241 LPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQFSSRSGIIGITQP 300
Query: 292 RRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLNDPQLS 351
RRVA + A RVA E+ V LGKEVG+ +R+D + + +I K+ TDG+LLRE ND L
Sbjct: 301 RRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGENSSI-KFMTDGILLREIQNDFLLR 359
Query: 352 SYSAIMIDEAHERTLSTDILLGLLRGILQDRKD-----------------------LRLI 388
YS I++DEAHER+L+TDIL+G+L +++ R++ L+LI
Sbjct: 360 RYSVIILDEAHERSLNTDILIGMLTRVIKIRQEYYEEQQKSLQSGGTVTSECQITPLKLI 419
Query: 389 ISSATMNATKF--SKFFFD--CPIFNVPGRRFPVDIHYTLQPE-GNYINAAITTIFQIHT 443
+ SAT+ F K F P+ VP R++PV IH++ + E +YI A + IH
Sbjct: 420 LMSATLRVEDFVSGKRLFPNIPPLIEVPTRQYPVTIHFSKKTEIVDYIGEAYKKVMSIH- 478
Query: 444 TQKLP-GDILVFLTGQEEIESMQTKL 468
+KLP G ILVF+TGQ E++ + KL
Sbjct: 479 -KKLPQGGILVFVTGQREVDYLCEKL 503
Score = 124 bits (310), Expect = 8e-28
Identities = 76/215 (35%), Positives = 112/215 (51%), Gaps = 18/215 (8%)
Query: 483 LLVVPIYANLPQEQQSKIFEPTPKNCRKVVLATNIAETSLTIDGIKFVVDPGFVKEQSYS 542
L V+P+YA L Q ++FE K R VV+ATN+AETSLTI GIK+VVD G VK ++Y
Sbjct: 647 LRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIKYVVDTGRVKVKNYD 706
Query: 543 G--GVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTKWSYYNELEKVPKPEIXXXXXX 600
G+ S+AS QRAGRAGR GPG C+RL++ + N E+ PEI
Sbjct: 707 SKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSNIFEESSLPEIMKVPVD 766
Query: 601 XXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALENLYAIGALNSRGAITKVGQVMCDFPCD 660
+FP P+ + EA L A+ AL+S G +T +G+ M +P
Sbjct: 767 GVILLMKSMNIPKVENFPFPTPPEPSAIREAERCLKALEALDSNGGLTPLGKAMSHYPMS 826
Query: 661 PEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESNS 695
P ++++ ++T++ ML+E+ +
Sbjct: 827 PRHSRM----------------LLTVIQMLKETRN 845
>CE29563 [AJ] KOG0926 DEAH-box RNA helicase
Length = 1148
Score = 186 bits (473), Expect = 1e-46
Identities = 145/491 (29%), Positives = 246/491 (49%), Gaps = 59/491 (12%)
Query: 16 GQRRAKRTYESIESVNANTNSFSPADQ--VLDSSPDPSLKDGKAHYSVNSIKSM------ 67
G+R+ K S E +AN P ++ L+ S + S GK + + K +
Sbjct: 2 GKRKTKEDNAS-EDYDANELMIVPGEKRKKLEKSGEKSATGGKKNRNFAKEKEVAKLTKQ 60
Query: 68 -------VEQKVLTKRQRSQLHWLVKDLQILEDDIKRYGWNNLTVSEREEISLKRELLKL 120
V+ + K+ + +L + + Q+ + + + E E+ + E LK+
Sbjct: 61 AKRKLAAVQSRKALKQTQEELFAGLAEFQLDPSKLCQLSSSTKLSKEPEKAPVFPEKLKV 120
Query: 121 LNETGKDYAENGDTSGFKMQDEVASKKQLLTAKLRNKTDRVNWEEEQMKKSVIKADADEI 180
+ K A+ + DE +S+++ EEE+ + I+ + +
Sbjct: 121 FSGKTKTEAKRTQQDYYPTDDESSSEEE---------------EEEEEGDNDIEDAGNTV 165
Query: 181 KVK----DSDNYEFVFD--PESMIDFT---------DDTTDILEPVEDGRLAEALEEQIN 225
+VK D D+ + D PE+ +D D DIL + + + +
Sbjct: 166 EVKIEPIDLDDVDEAIDGNPETNLDQIVVKREDDEESDNEDILA-LPTTTVINRKKVIVE 224
Query: 226 KMKSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDGKC 285
+ K I+++R LP++ I+++I ++ + +V GETGSGKTTQ+PQFL E GY ++G+
Sbjct: 225 RSKEIQKSRAELPIFAEEMRIVEAINENLVTVVCGETGSGKTTQIPQFLYEAGYASEGEL 284
Query: 286 VVCTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFL 345
+ T+PRRVAA ++A RV +++ EV Y IR++ T + T + + TDG+L++E
Sbjct: 285 IGITEPRRVAAIAMAQRVG--VELAKPDEVSYQIRYEG-TRSETTNILFMTDGVLMKEME 341
Query: 346 NDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDR----KDLRLIISSATMNATKFS- 400
D L YS I+IDEAHER++ +D+L+G+L I+ R + LRL+I SAT+ F+
Sbjct: 342 QDVMLKKYSVILIDEAHERSMYSDVLIGMLSRIVPLRSKTARPLRLVIMSATLRLDDFTH 401
Query: 401 -KFF--FDCPIFNVPGRRFPVDIHYTLQPEGNYINAAITTIFQIHTTQKLPGDILVFLTG 457
K F + V R+FPV +H+ + +YI +A +IH T PG ILVF+TG
Sbjct: 402 KKLFPLLTPKVIKVDARQFPVSVHFEKRTPDDYIASAFRKTCRIHETLP-PGAILVFVTG 460
Query: 458 QEEIESMQTKL 468
Q E++ + TKL
Sbjct: 461 QHEVKQLITKL 471
Score = 129 bits (323), Expect = 3e-29
Identities = 106/421 (25%), Positives = 185/421 (43%), Gaps = 45/421 (10%)
Query: 483 LLVVPIYANLPQEQQSKIFEPTPKNCRKVVLATNIAETSLTIDGIKFVVDPGFVKEQSYS 542
L +P+Y+ L +Q ++F+ TP R V++TN+AETSLTI G+K+V+D GF K + Y
Sbjct: 575 LYCLPLYSLLSMGKQRRVFDETPAGMRLCVISTNVAETSLTIPGVKYVIDGGFEKRRLYD 634
Query: 543 G--GVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTKWSYYNELEKVPKPEIXXXXXX 600
GVS+ S+AS DQRAGRAGR+ G +RL++ + Y + K PEI
Sbjct: 635 SITGVSRFAVCRISQASGDQRAGRAGRISAGHAYRLYSS-AVYQDFVKFADPEILSKPAD 693
Query: 601 XXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALENLYAIGALN-------SRGAITKVGQV 653
+FP P L A + L +GAL+ + ITK+G+
Sbjct: 694 QLVLHLKSMNIVKVVNFPFPSAPDEQMLESAEKRLCRLGALSESTKNGKTEARITKLGKT 753
Query: 654 MCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESNSIF----VPGLNSEEKTKL 709
+ FP P YAK I + + ++ + ++S+L + + G EE +L
Sbjct: 754 LAVFPLAPSYAKFIAMA----DQHNLMSHAILLISLLSVREPLIPVSSLRGDTPEETKEL 809
Query: 710 FGSLMQS-------------SDHMLYLWIYEQWEENGYSRRWCQDFKLQHKTMKRVLRIR 756
++++ D + + E+ Y+ R C+ L+ K + ++R
Sbjct: 810 MKNVLKERRRWCSHTGARRLGDLKVLMHAASVAEQIKYNARECEKVGLRVKALVEARKLR 869
Query: 757 QQLWKYCR---KQDFLLKHDQNL---TQLKENMPRSVIEAKIIKCFISGFPTNIA--KLS 808
QQL K++ D +L T + + R ++ A ++ ++
Sbjct: 870 QQLTNIVNASCKKEHAAALDSDLPPPTDQQAQLLRQMVVASFSDRLARRVDRSVGQEEVQ 929
Query: 809 KQGYTNIKQDLSVSVHPSSVIFNRMKQEGKPMKYILYQSLMLTSKEFIRDCITFDKYEWL 868
K Y V + P SV+F + ++++YQ L+ +++ + + EWL
Sbjct: 930 KGAYETTLIKGHVFIDPCSVVFT------EEPEFVIYQELVQVNEKKLMTSVCAVDKEWL 983
Query: 869 T 869
+
Sbjct: 984 S 984
>Hs18559453 [A] KOG0920 ATP-dependent RNA helicase A
Length = 965
Score = 183 bits (465), Expect = 9e-46
Identities = 112/291 (38%), Positives = 174/291 (59%), Gaps = 18/291 (6%)
Query: 142 EVASKKQLLTAKLRNKTDRVNWEEEQMKKSVIKADADEIKVKDSDNYEFVFDPE-SMIDF 200
E + L AKL NK + +++Q + S K + E + +N V D + S +
Sbjct: 79 ETNKPRDLFIAKLLNKLKQQ--QQQQQQHSENKRENSEDPEESWEN--LVSDEDFSALSL 134
Query: 201 TDDTTDILEPVEDGRLAEALEEQINKMKSIKETRKSLPVYQYRQEILDSIRQHQILIVVG 260
+ LEPV + L L+ K +KE R+ LPV+++R I++++++H++++V G
Sbjct: 135 ESANVEDLEPVRN--LFRKLQSTPKYQKLLKE-RQQLPVFKHRDSIVETLKRHRVVVVAG 191
Query: 261 ETGSGKTTQLPQFLVEDGYTND---GKC-VVCTQPRRVAATSIASRVADEMDVILGKE-- 314
ETGSGK+TQ+P FL+ED N+ KC +VCTQPRR++A S+A+RV DE+ G
Sbjct: 192 ETGSGKSTQVPHFLLEDLLLNEWEASKCNIVCTQPRRISAVSLANRVCDELGCENGPGGR 251
Query: 315 ---VGYNIRFDDRTTPDKTILKYTTDGMLLREFLNDPQLSSYSAIMIDEAHERTLSTDIL 371
GY IR + R + T L Y T G+LLR+ D LS+ S +++DE HER++ +D L
Sbjct: 252 NSLCGYQIRMESRAC-ESTRLLYCTTGVLLRKLQEDGLLSNVSHVIVDEVHERSVQSDFL 310
Query: 372 LGLLRGILQDRKDLRLIISSATMNATKFSKFFFDCPIFNVPGRRFPVDIHY 422
L +L+ ILQ R DL LI+ SAT+++ KFS +F CPI + GR +PV++ +
Sbjct: 311 LIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFH 361
Score = 115 bits (289), Expect = 2e-25
Identities = 113/440 (25%), Positives = 193/440 (43%), Gaps = 43/440 (9%)
Query: 445 QKLPGDILVFLTGQEEIESMQTKLLEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPT 504
+ + G +L+FL G I+ +L ++LS V+ +++ L + Q+ F
Sbjct: 460 RNIEGAVLIFLPGLAHIQ----QLYDLLSNDRRFYSERYKVIALHSILSTQDQAAAFTLP 515
Query: 505 PKNCRKVVLATNIAETSLTIDGIKFVVDPGFVKEQSY--SGGVSKLVTVPCSRASVDQRA 562
P RK+VLATNIAET +TI + FV+D G KE Y S +S LV S+AS QR
Sbjct: 516 PPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQ 575
Query: 563 GRAGRLGPGKCFRLFTKWSYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHF--PML 620
GRAGR+ G CFR++T+ + ++ PEI F L
Sbjct: 576 GRAGRVRDGFCFRMYTRERFEGFMD-YSVPEILRVPLEELCLHIMKCNLGSPEDFLSKAL 634
Query: 621 DKPKTIQLSEALENLYAIGALN-SRGAITKVGQVMCDFPCDPEYAK-VIYSSVFEESCNG 678
D P+ +S A+ L IGA + +T +GQ + P + + K +I+ ++F G
Sbjct: 635 DPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIF-----G 689
Query: 679 VLPEIVTIVSMLQESNSIFVP-GLNSEEKTKLFGSLMQSSDHMLYLWIYEQW----EENG 733
L + T+ +++ E + P G E M SDH+ Y W +E G
Sbjct: 690 CLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTIYNAYLGWKKARQEGG 749
Query: 734 YSRR--WCQDFKLQHKTMKRVLRIRQQLWKYCRKQDFLLKHDQNLTQLKENMPRSVI--- 788
Y +C+ L ++ + ++Q+L K + F T + N +
Sbjct: 750 YRSEITYCRRNFLNRTSLLTLEDVKQELIKLVKAAGF--SSSTTSTSWEGNRASQTLSFQ 807
Query: 789 EAKIIKC-FISGFPTNIAKLSKQGYTNIKQDLS---------VSVHPSSVIFNRMKQEGK 838
E ++K ++G N+ K+ ++ + L+ VHPSSV ++ +
Sbjct: 808 EIALLKAVLVAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHPSSV-----NRDLQ 862
Query: 839 PMKYILYQSLMLTSKEFIRD 858
++LYQ + ++ ++R+
Sbjct: 863 THGWLLYQEKIRYARVYLRE 882
>Hs7661934 [A] KOG0922 DEAH-box RNA helicase
Length = 576
Score = 170 bits (430), Expect = 1e-41
Identities = 83/208 (39%), Positives = 133/208 (63%), Gaps = 6/208 (2%)
Query: 221 EEQINKMKSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYT 280
++ ++ ++ R +LP+ QY IL ++++HQ+++V G+TG GK+TQ+PQ+L+ G++
Sbjct: 146 KQAFGRLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFS 205
Query: 281 NDGKCVVCTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGML 340
+ V CTQPRR+A S+A RV E G +VGY IRF+ T T + + T G+L
Sbjct: 206 H----VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFES-TRSAATKIVFLTVGLL 260
Query: 341 LREFLNDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNATKFS 400
LR+ +P L Y +++DE HER L D LLG+L+ +L R DL++I+ SAT+N + FS
Sbjct: 261 LRQIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFS 320
Query: 401 KFFFDCPIFNVPGRRFPVDIHYTLQPEG 428
+F + P+ VPGR FP+ + + + P G
Sbjct: 321 SYFSNAPVVQVPGRLFPITV-FDVAPPG 347
Score = 115 bits (287), Expect = 4e-25
Identities = 90/272 (33%), Positives = 128/272 (46%), Gaps = 28/272 (10%)
Query: 440 QIHTTQKLPGDILVFLTGQEEIESMQTKLLEILSKLDNTKFPDLLVVPI----------- 488
QI LP ++ + E LL +L +L T+ PDL V+ +
Sbjct: 263 QIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTR-PDLKVILMSATINISLFSS 321
Query: 489 -YANLPQEQQS------KIFEPTPKNCRKVVLATNIAETSLTIDGIKFVVDPGFVKEQSY 541
++N P Q +F+ P RK +L+TNIAETS+TIDGI+FVVD G VKE SY
Sbjct: 322 YFSNAPVVQVPGRLFPITVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSY 381
Query: 542 --SGGVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTKWSYYNELEKVPKPEIXXXXX 599
+ +L S+AS +QR GRAGR GPG CFRL+ + S Y+ P PEI
Sbjct: 382 DPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAE-SDYDAFAPYPVPEIRRVAL 440
Query: 600 XXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALENLYAIGALNSRGAITKVGQVMCDFPC 659
FP ++ P L A+ L GAL+S A+T +G ++ P
Sbjct: 441 DSLVLQMKSMSVGDPRTFPFIEPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPV 500
Query: 660 DPEYAK-VIYSSVFEESCNGVLPEIVTIVSML 690
D K +I S+F ++ ++TI + L
Sbjct: 501 DVVIGKMLILGSMF-----SLVEPVLTIAAAL 527
>7298709 [A] KOG0920 ATP-dependent RNA helicase A
Length = 674
Score = 170 bits (430), Expect = 1e-41
Identities = 88/222 (39%), Positives = 140/222 (62%), Gaps = 5/222 (2%)
Query: 206 DILEPVEDGRLAEAL-EEQINK-MKSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETG 263
D + P D RL L + Q+ + K E RK LP +Y +I+ ++R++Q++++VG TG
Sbjct: 49 DWVNPKLDERLQLELGQRQLEENAKKRLEARKKLPTMKYADDIIQAVRENQVILIVGSTG 108
Query: 264 SGKTTQLPQFLVEDGYTND--GKC-VVCTQPRRVAATSIASRVADEMDVILGKEVGYNIR 320
GKTTQ+PQ L++D + C ++CTQPRR++A +IA V+ E LG VGY IR
Sbjct: 109 CGKTTQVPQILLDDAISRGCASSCRIICTQPRRISAIAIAEWVSYERCESLGNSVGYQIR 168
Query: 321 FDDRTTPDKTILKYTTDGMLLREFLNDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQ 380
+ R ++ + Y T G+LL++ +DP + + S +++DE HER++ TD+L+GLL+ IL
Sbjct: 169 LESRKARERASITYCTTGVLLQQLQSDPLMHNLSVLILDEIHERSVETDLLMGLLKVILP 228
Query: 381 DRKDLRLIISSATMNATKFSKFFFDCPIFNVPGRRFPVDIHY 422
R DL++I+ SAT+ F +F +CP+F + G FPV + Y
Sbjct: 229 HRPDLKVILMSATVREQDFCDYFNNCPMFRIEGVMFPVKMLY 270
Score = 105 bits (263), Expect = 2e-22
Identities = 88/324 (27%), Positives = 150/324 (46%), Gaps = 24/324 (7%)
Query: 449 GDILVFLTGQEEIESMQTKLLEILSKLDNTKFP----DLLVVPIYANLPQEQQSKIFEPT 504
G ILVFL G ++I ++L IL K +K + V P+++ + +Q +F
Sbjct: 352 GAILVFLPGYDKI----SQLYNILDKPKTSKGQRWRDHMAVFPLHSLMQSGEQQAVFRRP 407
Query: 505 PKNCRKVVLATNIAETSLTIDGIKFVVDPGFVKEQSY--SGGVSKLVTVPCSRASVDQRA 562
P RKV+++T IAETS+TID + +V++ G K +Y + L V ++A+ QR
Sbjct: 408 PAGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSLDEVWVTKANTQQRR 467
Query: 563 GRAGRLGPGKCFRLFTKWSYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHF--PML 620
GRAGR+ PG C+ LF++ + + ++ +P PEI F ++
Sbjct: 468 GRAGRVRPGICYNLFSR-AREDRMDDIPTPEILRSKLESIILSLKLLHIDDPYRFLQTLI 526
Query: 621 DKPKTIQLSEALENLYAIGALNSRGAITKVGQVMCDFPCDPEYAKVIYSSVFEESCNGVL 680
+ P + +E L I AL+ G +T +G + P DP+ K+I S C L
Sbjct: 527 NAPNPEAIKMGVELLKRIEALDQTGTLTPLGMHLAKLPIDPQMGKMILMSAL--FC--CL 582
Query: 681 PEIVTIVSMLQESNSIFVPGLNSEEKTKLFGSLM---QSSDHMLYLWIYEQWEENGYS-- 735
I + + L + + P L E + M SDH++ + ++ YS
Sbjct: 583 DPITSAAAALSFKSPFYSP-LGKESRVDEIKRRMARNMRSDHLMVHNTIIAYRDSRYSHA 641
Query: 736 -RRWCQDFKLQHKTMKRVLRIRQQ 758
R +C L T++++ R++ Q
Sbjct: 642 ERDFCYKNFLSSMTLQQLERMKNQ 665
>Hs21717812 [A] KOG0920 ATP-dependent RNA helicase A
Length = 860
Score = 169 bits (429), Expect = 1e-41
Identities = 87/203 (42%), Positives = 130/203 (63%), Gaps = 4/203 (1%)
Query: 220 LEEQINKMKSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGY 279
+++ + +SI + R+SLP ++ R+ IL+ +R+HQ++++ G TG GKTTQ+PQF+++D
Sbjct: 1 MKQASRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSL 60
Query: 280 TNDGKCV---VCTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTT 336
+ + V +CTQPRR++A S+A RVA E +G VGY IR + T L Y T
Sbjct: 61 SGPPEKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLES-VKSSATRLLYCT 119
Query: 337 DGMLLREFLNDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNA 396
G+LLR D L S I++DE HERT +D LL +L+ I+ R L++I+ SAT+NA
Sbjct: 120 TGVLLRRLEGDTALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILMSATLNA 179
Query: 397 TKFSKFFFDCPIFNVPGRRFPVD 419
FS +F CP+ +PGR FPVD
Sbjct: 180 ELFSDYFNSCPVITIPGRTFPVD 202
Score = 128 bits (322), Expect = 3e-29
Identities = 120/466 (25%), Positives = 198/466 (41%), Gaps = 57/466 (12%)
Query: 448 PGDILVFLTGQEEIESMQTKLLEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKN 507
PG ILVFL G EI+ + +L + S +N + ++ P++++L E+Q +F P
Sbjct: 321 PGAILVFLPGLAEIKMLYEQL-QSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAG 379
Query: 508 CRKVVLATNIAETSLTIDGIKFVVDPGFVKEQSY--SGGVSKLVTVPCSRASVDQRAGRA 565
K++++TNIAETS+TID + +V+D G +KE+ Y S G+ L S+A+ QR GRA
Sbjct: 380 VTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRA 439
Query: 566 GRLGPGKCFRLFTKWSYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHFP-----ML 620
GR+ G CF +FT Y ++L K PEI + ++
Sbjct: 440 GRVASGVCFHVFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSVFSRLI 499
Query: 621 DKPKTIQLSEALENLYAIGALNSRGAITKVGQVMCDFPCDPEYAK-VIYSSVFEESCNGV 679
+ P T L + L +GAL +T +G + P D K +++ S+F
Sbjct: 500 EPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFR-----C 554
Query: 680 LPEIVTIVSMLQESNSIFVPGLNSEE-KTKLFGSLMQSSDHMLYLWIYEQWE---ENGY- 734
L +TI + L + P EE K +SD++ L Y+ W+ + G
Sbjct: 555 LDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLQAYKGWQLSTKEGVR 614
Query: 735 -SRRWCQDFKLQHKTMKRVLRIRQQLWKYCRKQDFLLK-------------HDQNLTQLK 780
S +C+ L + ++ + +++Q + F + D L
Sbjct: 615 ASYNYCRQNFLSGRVLQEMASLKRQFTELLSDIGFAREGLRAREIEKRAQGGDGVLDATG 674
Query: 781 ENMPRSVIEAKIIKCFISG--FPTNIAKLSKQGYTN-------------------IKQDL 819
E + K+I + +P + S +G K D
Sbjct: 675 EEANSNAENPKLISAMLCAALYPNVVQVKSPEGKFQKTSTGAVRMQPKSAELKFVTKNDG 734
Query: 820 SVSVHPSSVIFNRMKQEGKPMKYILYQSLMLTSKEFIRDCITFDKY 865
V +HPSSV + +++ P Y+LY + TS+ FIRDC Y
Sbjct: 735 YVHIHPSSVNY-QVRHFDSP--YLLYHEKIKTSRVFIRDCSMVSVY 777
>At1g48650 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1167
Score = 155 bits (391), Expect = 3e-37
Identities = 97/293 (33%), Positives = 162/293 (55%), Gaps = 14/293 (4%)
Query: 139 MQDEVASKKQLLTAKLRNKTDRVNWEEEQMKKSVI----KADADEIKVKDSDNYEFVFDP 194
+ D+ ++ +L L+++ D KK++I + ++ E NYE P
Sbjct: 169 LDDKRPQREVVLPFGLQSEVDAHLHSFLDQKKTLIPEMPRQNSSESLANGYGNYE---TP 225
Query: 195 ESMIDFTDDTTDILEPVEDGRLAEALEEQINKMKSIKET--RKSLPVYQYRQEILDSIRQ 252
E+++ + IL P +L ++ ++ + K RK+LP Y+ + +L +I
Sbjct: 226 ETVMQNSLARERILRP-RSLQLKSKQQQWVDSPEGQKMVGFRKTLPAYKEKDALLKAIAA 284
Query: 253 HQILIVVGETGSGKTTQLPQFLVEDGY--TNDGKC-VVCTQPRRVAATSIASRVADEMDV 309
+Q+++V GETG GKTTQLPQ+++E C ++CTQPRR++A S++ RVA E
Sbjct: 285 NQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQPRRISAISVSERVAAERGE 344
Query: 310 ILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLNDPQLSSYSAIMIDEAHERTLSTD 369
+G+ VGY +R + D +L + T G+LLR L D L + +++DE HER ++ D
Sbjct: 345 QIGESVGYKVRLEGMRGRDTRLL-FCTTGVLLRRLLVDRSLKGVTHVVVDEIHERGMNED 403
Query: 370 ILLGLLRGILQDRKDLRLIISSATMNATKFSKFFFDCPIFNVPGRRFPVDIHY 422
LL +L+ +L R DL+LI+ SAT+NA FS +F P ++PG +PV H+
Sbjct: 404 FLLIVLKDLLPRRPDLKLILMSATLNAELFSSYFGGAPAMHIPGFTYPVRAHF 456
Score = 129 bits (324), Expect = 2e-29
Identities = 117/433 (27%), Positives = 211/433 (48%), Gaps = 50/433 (11%)
Query: 448 PGDILVFLTGQEEIESMQTKLLEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKN 507
PG +LVF+TG ++I S++ +L E S L + +L++ + ++ +Q IF+ P+
Sbjct: 548 PGAVLVFMTGWDDINSLKNQL-EAHSLLGDPN--KVLLLACHGSMASSEQRLIFDRPPEG 604
Query: 508 CRKVVLATNIAETSLTIDGIKFVVDPGFVKEQSYSGGVSKLVTVPC------SRASVDQR 561
RK+VLATN+AETS+TI+ + +V+D G KE SY L PC S+A+ QR
Sbjct: 605 IRKIVLATNMAETSITINDVVYVIDCGKAKETSYDA----LNNTPCLLPSWISKAAARQR 660
Query: 562 AGRAGRLGPGKCFRLFTKWSYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHF--PM 619
GRAGR+ PG+C+ L+ + Y +PE+ F
Sbjct: 661 RGRAGRVMPGECYHLYPR-CVYEAFADYQQPELLRTPLQSLCLQIKSLGLGSISEFLSRA 719
Query: 620 LDKPKTIQLSEALENLYAIGALNSRGAITKVGQVMCDFPCDPEYAK-VIYSSVFEESCNG 678
L P+ + + A+E L IGAL+ +T +G+ + P +P+ K +I ++F
Sbjct: 720 LQPPEALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIF-----N 774
Query: 679 VLPEIVTIVSMLQESNSIFVP----GLNSEEKTKLFGSLMQSSDHMLYLWIYEQWEE--- 731
L ++T+V+ L + +P L ++K G SDH+ + Y W++
Sbjct: 775 CLDPVMTVVAGLSVRDPFLMPFDKKDLAETARSKFSG--RDYSDHLTLVRAYNGWKDAER 832
Query: 732 --NGYSRRWCQDFKLQHKTMKRVLRIRQQLWKYCRKQDFLLKHDQNLTQLK--ENMPRSV 787
+GY W ++F L +T+K + +R+Q + K+ L+ + + ++L E++ R++
Sbjct: 833 THSGYDYCW-KNF-LSSQTLKAMDSMRKQFFNLL-KEASLIDNIEGCSKLSHDEHLVRAI 889
Query: 788 IEAKIIKCFISGFPTNIAKLSKQGYTNIK--QDLSVSVHPSSVIFNRMKQEGKPMKYILY 845
I A + FP + ++K+ +K +D V ++ SSV N P ++++
Sbjct: 890 ICAGM-------FPGVCSVVNKEKSITLKTMEDGQVLLYSSSVNGN---VPMIPFPWLVF 939
Query: 846 QSLMLTSKEFIRD 858
+ + F+RD
Sbjct: 940 NDKVKVNSVFLRD 952
>Hs19525735 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 599
Score = 154 bits (389), Expect = 6e-37
Identities = 125/460 (27%), Positives = 221/460 (47%), Gaps = 19/460 (4%)
Query: 307 MDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLNDPQLSSYSAIMIDEAHERTL 366
MD+ LG EVG +I +D T P+ T+L++ D +LL+E + ++ +++DEA ER++
Sbjct: 1 MDLTLGHEVGSSIPQEDCTGPN-TLLRFCWDRLLLQEVASTRGTGAWGVLVLDEAQERSV 59
Query: 367 STDILLGLLRGILQDRK--DLRLIISSATMNATKFSKFFFDCPIFNVP---GRRFPVDIH 421
++D L GLL+ ++ DLR+++ + K F+ + PI ++P G R P I+
Sbjct: 60 ASDSLQGLLQDARLEKLPGDLRVVVVTDPALEPKLRAFWGNPPIVHIPREPGER-PSPIY 118
Query: 422 YTLQPEGNYINAAITTIFQIHTTQKLPGDILVFLTGQEEIESMQTKLLEILSKLDNTKFP 481
+ P + AA + ++ ++LPGD+LVFL +EEI L + L P
Sbjct: 119 WDTIPPDR-VEAACQAVLEL-CRKELPGDVLVFLPSEEEISLCCESLSREVESLLLQGLP 176
Query: 482 DLLVVPIYANLPQEQQSKIFEPTPKNCRKVVLATNIAETSLTIDGIKFVVDPGFVKEQSY 541
V+P++ + + Q+ ++E + RKVV+ +A+ S ++ I+ V+D G Y
Sbjct: 177 PR-VLPLHPDCGRAVQA-VYEDM--DARKVVVTHWLADFSFSLPSIQHVIDSGLELRSVY 232
Query: 542 SGGVSKLVTV--PCSRASVDQRAGRAGRLGPGKCFRLFTKWSYYNELEKVPKPEIXXXXX 599
+ + V P S+ + R RA PG C L+ K E +P+P +
Sbjct: 233 NPRIRAEFQVLRPISKCQAEARRLRARGFPPGSCLCLYPKSFLELEAPPLPQPRVCEENL 292
Query: 600 XXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALENLYAIGALNSRGAITKVGQVMCDFPC 659
LD+P L +ALE+L + AL+ G ++ +G ++ +FP
Sbjct: 293 SSLVLLLKRRQIAEPGECHFLDQPAPEALMQALEDLDYLAALDDDGDLSDLGVILSEFPL 352
Query: 660 DPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESNSIFVPGLNSEEKTKLFGSLMQSSDH 719
PE AK + +S E C + E++T+ +ML + P L++EE DH
Sbjct: 353 APELAKALLASC-EFDC---VDEMLTLAAMLTAAPGFTRPPLSAEEAALRRALEHTDGDH 408
Query: 720 MLYLWIYEQWEENGYSRRWCQDFKLQHKTMKRVLRIRQQL 759
+ +YE + ++G WCQ L + + ++R +L
Sbjct: 409 SSLIQVYEAFIQSGADEAWCQARGLNWAALCQAHKLRGEL 448
>At1g58060 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1453
Score = 153 bits (387), Expect = 1e-36
Identities = 86/222 (38%), Positives = 136/222 (60%), Gaps = 28/222 (12%)
Query: 221 EEQINKMKSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVED--- 277
+++ K K + +TR +LP+ + + IL +++ +L+V GETGSGKTTQ+PQF+++D
Sbjct: 598 KKRTQKYKDMLKTRTALPISEVKNGILQHLKEKDVLVVCGETGSGKTTQVPQFILDDMID 657
Query: 278 ----GYTNDGKCVVCTQPRRVAATSIASRVADE-------MDVILGKEVGYNIRFDDRTT 326
GY N ++CTQPRR+AA S+A RVADE +D L VGY +R + +
Sbjct: 658 SGHGGYCN----IICTQPRRIAAISVAQRVADERCESSPGLDDSL---VGYQVRLESARS 710
Query: 327 PDKTILKYTTDGMLLREFLNDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDR---- 382
DKT L + T G+LLR+ D L+ + I++DE HER+L D LL +L+ +++ +
Sbjct: 711 -DKTRLLFCTTGILLRKLAGDRTLNDVTHIIVDEVHERSLLGDFLLIILKSLIEKQSCDN 769
Query: 383 --KDLRLIISSATMNATKFSKFFFDCPIFNVPGRRFPVDIHY 422
+ L++I+ SAT++A FS++F CP+ GR PV H+
Sbjct: 770 TSRKLKVILMSATVDADLFSRYFGHCPVITAQGRTHPVTTHF 811
Score = 116 bits (291), Expect = 1e-25
Identities = 92/336 (27%), Positives = 158/336 (46%), Gaps = 35/336 (10%)
Query: 449 GDILVFLTGQEEIESMQTKLLEILSKLDNTKFPDL-LVVPIYANLPQEQQSKIFEPTPKN 507
G IL+FL G EI LL++L+ + P ++P+++++ +Q K+F PK
Sbjct: 916 GAILIFLPGVAEIYM----LLDMLAASYRFRGPAADWLLPLHSSIASSEQRKVFLRPPKG 971
Query: 508 CRKVVLATNIAETSLTIDGIKFVVDPGFVKEQSYS--GGVSKLVTVPCSRASVDQRAGRA 565
RKV+ ATNIAETS+TID + +V+D G KE Y+ +S +V S+A+ QR GRA
Sbjct: 972 LRKVIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLSSMVEDWISQANARQRTGRA 1031
Query: 566 GRLGPGKCFRLFTKWSYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHF--PMLDKP 623
GR+ PG CF L+T++ + + PE+ F L+ P
Sbjct: 1032 GRVKPGICFSLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKLLGLGHIKPFLSRALEPP 1091
Query: 624 KTIQLSEALENLYAIGALNSRGAITKVGQVMCDFPCDPEYAK-VIYSSVFEESCNGVLPE 682
++ A+ L+ +GA+ +T +G + P D K ++Y +F G L
Sbjct: 1092 SEGAMTSAISLLHEVGAVEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIF-----GCLSP 1146
Query: 683 IVTIVSMLQESNSIFVPGLNSEEKTKLFGSLM--------------QSSDHMLYLWIYEQ 728
I++I + L + P + ++ +L+ + SDH+L + Y++
Sbjct: 1147 ILSIAAFLSYKSPFIYPKDEKQNVDRVKLALLSDNGVSSSDLNNNDRQSDHLLMMVAYDK 1206
Query: 729 W----EENGY--SRRWCQDFKLQHKTMKRVLRIRQQ 758
W +E G ++R+C+ L M+ + +R Q
Sbjct: 1207 WVKILQERGMKAAQRFCESKFLSSSVMRMIRDMRVQ 1242
>7292573 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1280
Score = 153 bits (387), Expect = 1e-36
Identities = 82/219 (37%), Positives = 135/219 (61%), Gaps = 13/219 (5%)
Query: 212 EDGRLAEALEEQIN--KMKSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQ 269
E+ RL + E+ + + I + RK LP + + IL I ++++ GETG GK+TQ
Sbjct: 418 ENRRLLQQFVERRKEERYQKIIDGRKQLPAFAEIERILALIESSPVVVISGETGCGKSTQ 477
Query: 270 LPQFLVEDGYTNDGKC----------VVCTQPRRVAATSIASRVADEMDVILGKEVGYNI 319
+PQF++++ + + ++CTQPRR++A +A RVA E +G+ VGY I
Sbjct: 478 VPQFILDNWFFRALQLPAKENLPHVEIICTQPRRLSAIGVAERVAAERLDRIGQLVGYQI 537
Query: 320 RFDDRTTPDKTILKYTTDGMLLREFLNDPQLSSYSAIMIDEAHERTLSTDILLGLLRGIL 379
R +++ + T L + T G+LLR +DP L S + +++DE HER+ +D LL +L+ +L
Sbjct: 538 RLENKVS-QSTRLSFCTTGILLRRLASDPLLGSVTHVIVDEVHERSEESDFLLLILKNLL 596
Query: 380 QDRKDLRLIISSATMNATKFSKFFFDCPIFNVPGRRFPV 418
++RKDL++I+ SAT+NA FS +F P+ ++PGR FPV
Sbjct: 597 RERKDLKVILMSATLNAALFSDYFGGAPVLDIPGRTFPV 635
Score = 130 bits (327), Expect = 9e-30
Identities = 101/327 (30%), Positives = 158/327 (47%), Gaps = 26/327 (7%)
Query: 449 GDILVFLTGQEEIESMQTKLLEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKNC 508
G IL+FL G EI+S+ LL+ + L + + ++VP+++ L E Q+ +F+ P
Sbjct: 745 GTILIFLPGFGEIQSVHDSLLD--NALFSPRAGKFILVPLHSALSGEDQALVFKKAPPGK 802
Query: 509 RKVVLATNIAETSLTIDGIKFVVDPGFVKEQSYSG--GVSKLVTVPCSRASVDQRAGRAG 566
RK+VL+TNIAETS+TID FVVD G +KE+ + + L V SRA+ QR GRAG
Sbjct: 803 RKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKGRAG 862
Query: 567 RLGPGKCFRLFTKWSYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXH-----FPMLD 621
R+ PG C L+T + Y + P PEI + L+
Sbjct: 863 RVMPGVCIHLYTSYRYQYHILAQPVPEIQRVPLEQIVLRIKTLQTFASRNTLSVLLETLE 922
Query: 622 KPKTIQLSEALENLYAIGALNSRGAITKVGQVMCDFPCDPEYAK-VIYSSVFEESCNGVL 680
P + AL L +GAL++ +T +G + P D K ++Y ++F+ L
Sbjct: 923 APTEDSVLGALTRLRDVGALDAEDQLTPLGHHLAALPVDVRIGKLMLYGAIFQ-----CL 977
Query: 681 PEIVTIVSMLQESNSIFVPGLNSE---EKTKLFGSLMQSSDHMLYLWIYEQW----EENG 733
++TI + L + S FV LN +K K +L +SDH+ L Y +W
Sbjct: 978 DSVLTIAACL-SNKSPFVSPLNKRTEADKCKRMFAL-GNSDHLTVLNAYRKWLDVARRGN 1035
Query: 734 Y--SRRWCQDFKLQHKTMKRVLRIRQQ 758
Y SR + + L T++ + ++ Q
Sbjct: 1036 YAASRNYASEHFLSLNTLETIADLKYQ 1062
>At2g01130 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1112
Score = 151 bits (382), Expect = 4e-36
Identities = 78/194 (40%), Positives = 123/194 (63%), Gaps = 4/194 (2%)
Query: 232 ETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGY-TNDG--KCVVC 288
++R SLP ++ R +L +I Q+Q++++ GETG GKTTQ+PQF++E N G ++C
Sbjct: 214 DSRTSLPAFKQRHSVLTAISQNQVIVISGETGCGKTTQIPQFILESEIEANRGAFSSIIC 273
Query: 289 TQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLNDP 348
TQPRR++A S++ RVA E LG+ VGY +R + D +L + T G+LLR L D
Sbjct: 274 TQPRRISAMSVSERVAYERGEQLGESVGYKVRLEGVKGRDTRLL-FCTTGILLRRLLVDR 332
Query: 349 QLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNATKFSKFFFDCPI 408
L + +++DE HER ++ D LL +L+ +L R +L+LI+ SAT++A FS +F +
Sbjct: 333 NLRGVTHVIVDEIHERGMNEDFLLIILKDLLSRRSELKLILMSATLDAELFSSYFGGAGV 392
Query: 409 FNVPGRRFPVDIHY 422
+PG +PV H+
Sbjct: 393 IYIPGFTYPVRSHF 406
Score = 124 bits (311), Expect = 6e-28
Identities = 99/330 (30%), Positives = 158/330 (47%), Gaps = 34/330 (10%)
Query: 448 PGDILVFLTGQEEIESMQTKLLEILSKLDNTKFPDL-LVVPIYANLPQEQQSKIFEPTPK 506
PG IL+FLTG ++I S++ KL +I N PDL +++ + ++ +Q IFE
Sbjct: 497 PGGILIFLTGWDDISSLKEKL-QIHPIFGN---PDLVMLLACHGSMETFEQRLIFEEPAS 552
Query: 507 NCRKVVLATNIAETSLTIDGIKFVVDPGFVKEQSYSGGVSKLVTVPC------SRASVDQ 560
RK+VLATNIAETS+TI+ + FV+D G KE SY L PC S+ S Q
Sbjct: 553 GVRKIVLATNIAETSITINDVAFVIDCGKAKETSYDA----LNNTPCLLPSWISKVSAQQ 608
Query: 561 RAGRAGRLGPGKCFRLFTKWSYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHF--P 618
R GRAGR+ PG+C+ L+ K Y+ + PEI F
Sbjct: 609 RRGRAGRVRPGQCYHLYPK-CVYDAFAEYQLPEILRTPLHSLCLQIKSLNLGSISEFLSR 667
Query: 619 MLDKPKTIQLSEALENLYAIGALNSRGAITKVGQVMCDFPCDPEYAKVIYSSVFEESCNG 678
L P+ + + +A+ L IGAL+ +T +G+ + P +P+ K++ + G
Sbjct: 668 ALQSPELLAVQKAIAFLKIIGALDENEDLTTLGRYLSKLPMEPKLGKMLILG----AILG 723
Query: 679 VLPEIVTIVSMLQESNSIFVPGLNSEEKTKLFGSLMQS-----SDHMLYLWIYEQW---E 730
L I+T+ + L S+ P L ++K L + SDH+ + YE W E
Sbjct: 724 CLDPILTVAAGL----SVRDPFLTPQDKKDLAEAAKSQFSRDHSDHLALVRAYEGWKKAE 779
Query: 731 ENGYSRRWCQDFKLQHKTMKRVLRIRQQLW 760
E +C L ++++ + +R++ +
Sbjct: 780 EESAVYDYCWKNFLSIQSLRAIDSLRKEFF 809
>At2g47680 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1015
Score = 149 bits (375), Expect = 2e-35
Identities = 124/401 (30%), Positives = 198/401 (48%), Gaps = 59/401 (14%)
Query: 236 SLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDGKCVVCTQPRRVA 295
SLP+ ++ I+D I ++++ ++VGE G GK++Q+PQFL+E ++CTQPRR A
Sbjct: 25 SLPIMAMKRRIIDKILENRVTLIVGEPGCGKSSQVPQFLLEANMAP----ILCTQPRRFA 80
Query: 296 ATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLNDPQLSS--Y 353
++A VA + LG E+GY+I T IL + T G+LL E L D L++ Y
Sbjct: 81 VVAVAKMVAKSRNSDLGGEIGYHIGHSKILTEGSKIL-FKTAGVLLDEML-DKGLNALKY 138
Query: 354 SAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNATKFSKFFFDCPIFNVPG 413
I++DE HER++ +D++L ++ L DLR+++ SAT + T++ +F + G
Sbjct: 139 KVIILDEVHERSVESDLVLVCVKQFLMKNNDLRVVLMSATADITRYRDYFKEL------G 192
Query: 414 RRFPVDIHYTLQPEGNYI-NAAITTIFQIHTTQKLPGDILVFLTG------QEEIESMQT 466
R V++ P+ I + + Q+ + D+ + G EI+
Sbjct: 193 RGERVEVVAIPSPDQRTIFQRRVLYLEQVAGLLGVSSDLSAYCPGPSPSSADTEIKPELQ 252
Query: 467 KLLEILSKLDNTKFPD-----LLVVPIYANLPQEQQSKIFEP------------------ 503
L+ L + K PD L+ +P Y +L EQQ EP
Sbjct: 253 NLIHDLILYIHEKEPDIEKSILVFLPTYYSL--EQQYHQLEPFFASFEVHILHRSIDTEQ 310
Query: 504 ---TPKNC---RKVVLATNIAETSLTIDGIKFVVDP----GFVKEQSYSGGVSKLVTVPC 553
K C RKV+LATNIAE+S+TI + +V+D + S +LV V
Sbjct: 311 ALAAMKICRSRRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDPSRKRDAVQLVWV-- 368
Query: 554 SRASVDQRAGRAGRLGPGKCFRLFTKWSYYNELEKVPKPEI 594
SR+ +QR GR GR G+ +RL +++N+LE+ P I
Sbjct: 369 SRSQAEQRRGRTGRTCDGEVYRLVPS-AFFNKLEEHEPPSI 408
>CE05718 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1425
Score = 148 bits (373), Expect = 4e-35
Identities = 84/200 (42%), Positives = 123/200 (61%), Gaps = 6/200 (3%)
Query: 228 KSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDGKC-V 286
K +++ R SLP +Y ++L SI ++I+ G TG GKTTQ+PQF++++ + N+ V
Sbjct: 172 KELQKVRNSLPASKYCDQVLKSISSCNVVIISGGTGCGKTTQVPQFILDEAHENNKHVRV 231
Query: 287 VCTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLN 346
+ TQPRR+AA SIA RVA E +G+ VGY +R D R + D T+L Y T G+LLR +
Sbjct: 232 MVTQPRRIAAISIAERVARERGEPIGRTVGYQVRLDSRRSDD-TVLTYCTTGVLLRMLTS 290
Query: 347 DPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATM--NATKFSKFF- 403
DP S + I++DE HER ++TD LL LR L+ R DL++I+ SAT+ N FS +F
Sbjct: 291 DPVASGITHIVMDEIHEREINTDYLLIALRECLKMRPDLKVILMSATIEGNMQLFSNYFE 350
Query: 404 -FDCPIFNVPGRRFPVDIHY 422
+ + R F V + Y
Sbjct: 351 NHSMDVIRIESRAFDVKVFY 370
Score = 129 bits (324), Expect = 2e-29
Identities = 120/458 (26%), Positives = 210/458 (45%), Gaps = 73/458 (15%)
Query: 449 GDILVFLTGQEEIESMQTKLLEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKNC 508
G ILVFL G E+I+ M + + L N K +++V+P+++ + IF+ PK+
Sbjct: 645 GTILVFLPGYEDIQQMLKAIDCWKNSLKNMK--NVIVLPLHSQMTSINHGDIFKSVPKDT 702
Query: 509 RKVVLATNIAETSLTIDGIKFVVDPGFVKEQSY--SGGVSKLVTVPCSRASVDQRAGRAG 566
RK++LATNIAE S+TI+ + FVVD G VKE+S+ +S L P +R++ DQR+GRAG
Sbjct: 703 RKIILATNIAEASITIEDVIFVVDTGKVKEKSFDHEAKLSTLTVKPIARSNADQRSGRAG 762
Query: 567 RLGPGKCFRLFTKWSYYNELE-KVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPML--DKP 623
R+ G C RL+T+ Y + E ++ + + F L + P
Sbjct: 763 RVANGYCIRLYTEQEYNSMPETQIAEMKRAAIYDVTLHAKLFAPKTLKISEFLSLAPEPP 822
Query: 624 KTIQLSEALENLYAIGAL-----------NSRG----------------AITKVGQVMCD 656
+ + +A+ L IGA N G +T +G++M
Sbjct: 823 EKESILQAITFLEQIGAFYTPIKIYDNSGNEEGLKNDEEAENSENPEDPELTDLGRLMAR 882
Query: 657 FPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESNSIFVPGLNS----EEKTKLFGS 712
P DP+ ++++ + + L IV +V++L S +V L+ + K K +
Sbjct: 883 LPLDPQLSRMLLFGLALK----CLTPIVNLVALL-ASREPYVLALSEDRDLQSKMKFEMA 937
Query: 713 LMQSSDHMLYLWIYEQW--EENGYSRRWCQDFKLQHKTMKRVLRIRQQLWKYCRKQDFL- 769
SDH+LY+ + ++ + N ++C+D L TM+ V R+QL + + +
Sbjct: 938 QQDLSDHLLYIRLCNEFCSKNNSQQNQFCRDHFLNFSTMRMVQGTRRQLLRELVRAKLIN 997
Query: 770 ---------LKHDQNLTQLKENMPRSVIEAKIIK-CF----ISGFPTNIAKLSKQGYTNI 815
+ D + Q + P +I+A I C+ +S +N+ K+
Sbjct: 998 ISPNRDVLTVLTDHHFNQFSQCWP--MIQAVIAAGCYPFIGVSASESNLKKV------QT 1049
Query: 816 KQDLSVSVHPSSVIFNRMKQEGKPMK-----YILYQSL 848
D +HPSS++ ++ + GK K Y+ +Q +
Sbjct: 1050 FNDKPAFLHPSSMVKKQIVKMGKSEKSPRVEYVAFQEM 1087
>CE13245 [A] KOG0922 DEAH-box RNA helicase
Length = 1019
Score = 147 bits (371), Expect = 7e-35
Identities = 136/550 (24%), Positives = 239/550 (42%), Gaps = 106/550 (19%)
Query: 396 ATKFSKFFFDCPIFNVPGRRFPVDIHYTLQPEGN-------YINAAITTIFQIHTTQKLP 448
A KF +F + + V GR FP+++ + + P+ N Y+ A+ + +H T+
Sbjct: 433 AEKFQSYFNNAKVVLVAGRTFPIEVFH-VNPKINKSFSSTDYVYNAVICVKYVHLTEPKG 491
Query: 449 GDILVFLTGQEEIESMQTKLLEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPK-- 506
DILVFLTG EEIE++ ++L E+ L + L+ VP+YA L E+Q + F TP+
Sbjct: 492 RDILVFLTGSEEIEAVASQLAELNGSLPASA-DVLMPVPLYAALRPEKQKEAFRKTPQVW 550
Query: 507 --------------------------------------------------NCRKVVLATN 516
RKV+++TN
Sbjct: 551 FRVKGKIGKSKIRKKDEKSKIFVARFFSRRCRHPCSGLSQKILLKFTFLSGARKVIISTN 610
Query: 517 IAETSLTIDGIKFVVDPGFVKEQSYS--GGVSKLVTVPCSRASVDQRAGRAGRLGPGKCF 574
IAETS+TI GI+ V+D G VK + + + L S+A QRAGRAGR PGKC+
Sbjct: 611 IAETSVTIPGIRVVIDSGKVKTKRFEAFNRIDVLKVHNVSKAQAKQRAGRAGRDAPGKCY 670
Query: 575 RLFTKWSYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALEN 634
RL+++ ++ + E PEI ++D P+T ++ AL
Sbjct: 671 RLYSREDFH-KFEAENMPEILRCNLSATFLELMKLGMKNPHRLKLIDPPETDNINAALLE 729
Query: 635 LYAIGAL------NSRGAITKVGQVMCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVS 688
L ++GA+ S+ A+T++G C +P P++A+++ F+ G + E + IV+
Sbjct: 730 LTSLGAIRPVNSDRSKFALTEMGDAFCMYPLPPDHARIL----FQAQKEGCIMEAIKIVA 785
Query: 689 MLQESNSIFVPGLNSEEKTKLFGSL----MQSSDHM----LYLWIYEQWEENGYSRRWCQ 740
+Q ++++F +S+ + + DH+ L L + +++
Sbjct: 786 AMQ-TDALFSGAGDSKSDADVDRIRRRFETREGDHITLLKLVLVTNQFFDQLNKKTESDA 844
Query: 741 DFKLQHKTMKRVLRIRQQLWKYCRKQDFLLKHDQNLTQLKENMPRSVIEAKII------- 793
+ +K+++R Q + K+C +H + + ++E + + IE K+
Sbjct: 845 RYGKANKSLER--EYNQTIRKFCNDNMINEQHLKTASMIEEQLKQIAIEQKVTFSTCGAD 902
Query: 794 -----KCFISGFPTNIAKLSKQG---YTNIKQDLSVSVHPSSVIFNRMKQEGKPMKYILY 845
K G N + +Q I +++ +HPSS + KP YI++
Sbjct: 903 FMKMRKALALGMFLNSCEYDRQEDRYRLMINPAITLKIHPSSCL-----SRSKP-AYIVF 956
Query: 846 QSLMLTSKEF 855
LM T+ F
Sbjct: 957 SELMKTNDLF 966
Score = 145 bits (366), Expect = 3e-34
Identities = 81/168 (48%), Positives = 112/168 (66%), Gaps = 6/168 (3%)
Query: 231 KETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDGKCVVCTQ 290
K +R LP+ Q+++ + + LIV+GETGSGK+TQ+PQ V G N G V TQ
Sbjct: 155 KFSRPQLPIDAVEQQLMYELASQETLIVIGETGSGKSTQVPQLCVRAGIANSGSIAV-TQ 213
Query: 291 PRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLNDPQL 350
PRRVAA S+ASRVA EM +G VGY++RF++ T KT ++Y TDG++LR+ L P L
Sbjct: 214 PRRVAAISLASRVATEMGTNIGGIVGYHVRFENATC-HKTKIEYMTDGIVLRKALVSPLL 272
Query: 351 SSYSAIMIDEAHERTLSTDILLGLLRGILQDRKD----LRLIISSATM 394
YS ++IDEAHER+L +D+L+ +LR R++ LRLII SAT+
Sbjct: 273 DKYSCVIIDEAHERSLHSDVLMCILRQCQDQRRETNNPLRLIIMSATL 320
>At2g30800 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1299
Score = 145 bits (367), Expect = 2e-34
Identities = 74/212 (34%), Positives = 131/212 (60%), Gaps = 9/212 (4%)
Query: 219 ALEEQINKMKSIKET---RKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLV 275
+L ++ K K++KE R LP+ ++ I ++ +Q++++ GETG GKTTQ+PQ+L+
Sbjct: 166 SLSSRLKKDKALKEITKLRSKLPITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLL 225
Query: 276 EDGYTNDGKC--VVCTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILK 333
+ +++ + +VCTQPRR++A S++ R++ E +G+ +GY +R + +++
Sbjct: 226 DHMWSSKRETCKIVCTQPRRISAMSVSERISCERGESIGENIGYKVRLQSKGGRHSSVV- 284
Query: 334 YTTDGMLLREFLNDPQLSSYSAI---MIDEAHERTLSTDILLGLLRGILQDRKDLRLIIS 390
+ T+G+LLR + +SS S I ++DE HER +D +L ++R +L LRLI+
Sbjct: 285 FCTNGILLRVLVGKGSVSSVSDITHIIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILM 344
Query: 391 SATMNATKFSKFFFDCPIFNVPGRRFPVDIHY 422
SAT++A +FS +F CP+ VPG +PV Y
Sbjct: 345 SATLDAERFSGYFGGCPVVRVPGFTYPVRTLY 376
Score = 127 bits (319), Expect = 7e-29
Identities = 92/330 (27%), Positives = 160/330 (47%), Gaps = 32/330 (9%)
Query: 449 GDILVFLTGQEEIESMQTKLLEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKNC 508
G ILVFL G ++I + +LLE D+ KF ++ +++ +P +Q K+F P C
Sbjct: 552 GAILVFLPGWDDINKTRQRLLENPFFADSAKFD---IICLHSMVPAGEQKKVFNRPPPGC 608
Query: 509 RKVVLATNIAETSLTIDGIKFVVDPGFVKEQSYS--GGVSKLVTVPCSRASVDQRAGRAG 566
RK+VLATNIAE+++TID + +V+D G +KE+SY VS L + S+A+ QR GRAG
Sbjct: 609 RKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQRQGRAG 668
Query: 567 RLGPGKCFRLFTKWSYYN-------ELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPM 619
R PG C+ L+++ + E++++P E+ +
Sbjct: 669 RCQPGICYHLYSRLRAASMPDFKVPEIKRMPVEELCLQVKILDPNCKTNDFLQ-----KL 723
Query: 620 LDKPKTIQLSEALENLYAIGALNSRGAITKVGQVMCDFPCDPEYAKVIYSSVFEESCNGV 679
LD P ++ AL L IGAL + +T++G+ P P +K+++ +V +
Sbjct: 724 LDPPVDQSIANALSILQDIGALTPQEELTELGEKFGHLPVHPLISKMLFFAVLVNCLDPA 783
Query: 680 LPEIVTIVSMLQESNSIFVPGLNSEEKTKLFGSLMQ-------SSDHMLYLWIYEQWEE- 731
L ++ + F ++ E+ K + ++ SDH+ + +E W+
Sbjct: 784 L-----TLACAADYKEPFTMPMSPVERQKAAAAKLELASLCGGDSDHLAVVAAFECWKNA 838
Query: 732 --NGYSRRWCQDFKLQHKTMKRVLRIRQQL 759
G S +C + + MK + ++R QL
Sbjct: 839 KGRGLSAEFCSQYFVSPSAMKMLDQMRSQL 868
>At1g06670 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1576
Score = 143 bits (360), Expect = 1e-33
Identities = 71/196 (36%), Positives = 123/196 (62%), Gaps = 6/196 (3%)
Query: 228 KSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDGKC-- 285
+ I E R LP+ +R I+ ++ +Q++++ GETG GKTTQ+PQ+L++ + + +
Sbjct: 208 REIFEARSKLPIASFRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLDHMWHSKKEACK 267
Query: 286 VVCTQPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFL 345
++CTQPRR++A S++ R++ E +G+ VGY +R + +++ + T+G+LLR +
Sbjct: 268 IICTQPRRISAISVSDRISWERGETIGRTVGYKVRLQSEGGRESSVV-FCTNGILLRVLI 326
Query: 346 NDPQLSSY---SAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMNATKFSKF 402
SS + I++DE HER +D +L +LR +L LRLI+ SAT++A +FS++
Sbjct: 327 GKGVNSSVPDITHIIVDEIHERDSYSDFMLMILRDLLPSNPHLRLILMSATLDAERFSEY 386
Query: 403 FFDCPIFNVPGRRFPV 418
F CP+ VPG +PV
Sbjct: 387 FGGCPVVRVPGFTYPV 402
Score = 131 bits (329), Expect = 5e-30
Identities = 99/349 (28%), Positives = 168/349 (47%), Gaps = 33/349 (9%)
Query: 423 TLQPEGNYINAAITTIFQIHTTQKLPGDILVFLTGQEEIESMQTKLLEILSKLDNTKFPD 482
T++PE + + + +I + K G ILVFL G EEI + KLL+ + KF
Sbjct: 551 TIKPEEVDVGLIVKLMKKICSDSK-DGAILVFLPGWEEISKTKEKLLDDRFFAHSAKF-- 607
Query: 483 LLVVPIYANLPQEQQSKIFEPTPKNCRKVVLATNIAETSLTIDGIKFVVDPGFVKEQSYS 542
+++ +++ +P E+Q K+F P+ CRK+VLATNIAE+++TID + +V+D G +KE+SY
Sbjct: 608 -IILCLHSRVPAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYD 666
Query: 543 --GGVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTKWSYYN-------ELEKVPKPE 593
VS L + S+A+ QRAGRAGR G C+ L++K + E+ ++P E
Sbjct: 667 PYNDVSTLQSSWVSKANAKQRAGRAGRCQAGICYHLYSKLRAASLPEYRVPEVMRMPVDE 726
Query: 594 IXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLSEALENLYAIGALNSRGAITKVGQV 653
+ ++D P + AL L IGAL +T++GQ
Sbjct: 727 LCLQVKMLDPNCNVNDFLQ-----KLMDPPVAQSIENALIILKDIGALTPEEELTELGQK 781
Query: 654 MCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESNSIFVPGLNSEEKTK----- 708
P P +K+IY ++ + L I++ + F L+ ++ K
Sbjct: 782 FGQLPVHPRISKMIYFAILVNCLDPAL-----ILACAADEKDPFTMPLSPGDRKKAAAAK 836
Query: 709 --LFGSLMQSSDHMLYLWIYEQWEE---NGYSRRWCQDFKLQHKTMKRV 752
L SDH+ + ++ W+ +G ++ +C + + MKR+
Sbjct: 837 HELASLYGDHSDHLATVAAFQCWKNAKASGQAKEFCSKYFISQVVMKRL 885
>At1g58050 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1417
Score = 141 bits (356), Expect = 4e-33
Identities = 80/219 (36%), Positives = 132/219 (59%), Gaps = 25/219 (11%)
Query: 221 EEQINKMKSIKETRKSLPVYQYRQEILDSIRQHQILIVVGETGSGKTTQLPQFLVED--- 277
++++ K K + +TR +LP+ + +++IL +++ +L+V GETGSGKTTQ+PQF+++D
Sbjct: 581 KKKMQKYKDMLKTRAALPISEVKKDILQKLKEKDVLVVCGETGSGKTTQVPQFILDDMID 640
Query: 278 ----GYTNDGKCVVCTQPRRVAATSIASRVADEM----DVILGKEVGYNIRFDDRTTPDK 329
GY N ++CTQPR A ++A RVADE V Y +R + + DK
Sbjct: 641 SGHGGYCN----IICTQPR---AITVAQRVADERCEPPPGFDNSVVAYQVRHQNARS-DK 692
Query: 330 TILKYTTDGMLLREFLNDPQLSSYSAIMIDEAHERTLSTDILLGLLRGILQDRK------ 383
T L + T G+LLR+ + D L + I++DE HER+L D LL +L+ +++ +
Sbjct: 693 TRLLFCTTGILLRKLVGDTTLKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQSWDNALP 752
Query: 384 DLRLIISSATMNATKFSKFFFDCPIFNVPGRRFPVDIHY 422
L++I+ SAT++A +FS++F CPI GR PV ++
Sbjct: 753 KLKVILMSATVDAHQFSRYFGQCPIITAQGRTHPVTTYF 791
Score = 116 bits (290), Expect = 2e-25
Identities = 97/334 (29%), Positives = 157/334 (46%), Gaps = 34/334 (10%)
Query: 449 GDILVFLTGQEEIESMQTKLLEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKNC 508
G ILVFL G EI + +L S D L+ P+++++ +Q K+F PK
Sbjct: 883 GAILVFLPGMSEINMLLNRLAA--SYRFRGASGDWLL-PLHSSIASTEQKKVFLRPPKGI 939
Query: 509 RKVVLATNIAETSLTIDGIKFVVDPGFVKEQSYS--GGVSKLVTVPCSRASVDQRAGRAG 566
RKV++ATNIAETS+TI+ + +V+D G KE Y+ +S +V S+A+ QR GRAG
Sbjct: 940 RKVIIATNIAETSITIEDVVYVIDSGKHKENRYNPHKKLSSMVEDWVSKANARQRMGRAG 999
Query: 567 RLGPGKCFRLFTKWSYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHF--PMLDKPK 624
R+ PG CF L+T+ + + PE+ F L+ P
Sbjct: 1000 RVKPGHCFSLYTRHRFEKLMRPYQVPEMLRVPLVELCLHIKLLGLGQIKPFLSKALEPPS 1059
Query: 625 TIQLSEALENLYAIGALNSRGAITKVGQVMCDFPCDPEYAK-VIYSSVFEESCNGVLPEI 683
++ A+ L+ +GAL +T +G + P D K ++Y +F G L I
Sbjct: 1060 ESAINSAILLLHKVGALEGDEELTPLGHHLAKLPVDLLIGKMLLYGGIF-----GCLSPI 1114
Query: 684 VTIVSMLQESNSIFVPGLNSEE----KTKLFGSLMQS----------SDHMLYLWIYEQW 729
++I + L S FV + + K L ++S SDH+L + YE+W
Sbjct: 1115 LSIAAFLSCCKSPFVYAKDEQNVDRVKLALLSDKLESSSNLNNNDRQSDHLLMVVAYEKW 1174
Query: 730 ----EENGY--SRRWCQDFKLQHKTMKRVLRIRQ 757
E G+ + +C+ K + ++ R++R R+
Sbjct: 1175 VRILHEQGFKAAESFCES-KFLNSSVMRMMRERR 1207
>Hs20536957 [A] KOG0920 ATP-dependent RNA helicase A
Length = 688
Score = 129 bits (325), Expect = 2e-29
Identities = 121/466 (25%), Positives = 198/466 (41%), Gaps = 57/466 (12%)
Query: 448 PGDILVFLTGQEEIESMQTKLLEILSKLDNTKFPDLLVVPIYANLPQEQQSKIFEPTPKN 507
PG ILVFL G EI+ + +L + S +N + ++ P++++L E+Q +F P
Sbjct: 149 PGAILVFLPGLAEIKMLYEQL-QSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAG 207
Query: 508 CRKVVLATNIAETSLTIDGIKFVVDPGFVKEQSY--SGGVSKLVTVPCSRASVDQRAGRA 565
K++++TNIAETS+TID + +V+D G +KE+ Y S G+ L S+A+ QR GRA
Sbjct: 208 VTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRA 267
Query: 566 GRLGPGKCFRLFTKWSYYNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHFP-----ML 620
GR+ G CF LFT Y ++L K PEI + ++
Sbjct: 268 GRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSVFSRLI 327
Query: 621 DKPKTIQLSEALENLYAIGALNSRGAITKVGQVMCDFPCDPEYAK-VIYSSVFEESCNGV 679
+ P T L + L +GAL +T +G + P D K +++ S+F
Sbjct: 328 EPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFR-----C 382
Query: 680 LPEIVTIVSMLQESNSIFVPGLNSEE-KTKLFGSLMQSSDHMLYLWIYEQWE---ENGY- 734
L +TI + L + P EE K +SD++ L Y+ W+ + G
Sbjct: 383 LDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLQAYKGWQLSTKEGVR 442
Query: 735 -SRRWCQDFKLQHKTMKRVLRIRQQLWKYCRKQDFLLK-------------HDQNLTQLK 780
S +C+ L + ++ + +++Q + F + D L
Sbjct: 443 ASYNYCRQNFLSGRVLQEMASLKRQFTELLSDIGFAREGLRAREIEKRAQGGDGVLDATG 502
Query: 781 ENMPRSVIEAKIIKCFISG--FPTNIAKLSKQGYTN-------------------IKQDL 819
E + K+I + +P + S +G K D
Sbjct: 503 EEANSNAENPKLISAMLCAALYPNVVQVKSPEGKFQKTSTGAVRMQPKSAELKFVTKNDG 562
Query: 820 SVSVHPSSVIFNRMKQEGKPMKYILYQSLMLTSKEFIRDCITFDKY 865
V +HPSSV + +++ P Y+LY + TS+ FIRDC Y
Sbjct: 563 YVHIHPSSVNY-QVRHFDSP--YLLYHEKIKTSRVFIRDCSMVSVY 605
>At5g14900 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 301
Score = 100 bits (249), Expect = 1e-20
Identities = 77/269 (28%), Positives = 131/269 (48%), Gaps = 31/269 (11%)
Query: 617 FPMLDKPKTIQLSEALENLYAIGALNSRGAITKVGQVMCDFPCDPEYAKVIYSSVFEESC 676
F ++D P L+ AL++LY +GAL+ +TK G++M +FP DP+ AK++ S + +C
Sbjct: 22 FDLIDSPAPDTLARALDDLYHLGALDDDCNLTKTGEMMSEFPLDPQMAKMLIVSP-QFNC 80
Query: 677 NGVLPEIVTIVSMLQESNSIFVP----GLNSEEKTKLFGSLMQSSDHMLYLWIYEQWEEN 732
+ EI++I +ML N P ++E F + DH+ L ++ + +N
Sbjct: 81 SN---EILSISAMLSVPNCFIRPRGEAQKAADEAKSSFAHI--DGDHLTLLNLFHAFLQN 135
Query: 733 GYSRRWCQDFKLQHKTMKRVLRIRQQLWK-YCRKQDFLLKHDQNLTQLKENMPRSVIEAK 791
WC + ++ MK + +R+QL + R Q L D N N
Sbjct: 136 NQDPNWCCTKFINYRAMKSAVSVREQLVRIMLRFQIKLCSPDFNSRDYYVN--------- 186
Query: 792 IIKCFISGFPTNIAKLSKQGY---TNIKQDLSVSVHPSSVIFNRMKQEGKPMKYILYQSL 848
I K ++G+ +A L + G+ K D V +HPS+ + + KP ++++Y
Sbjct: 187 IRKALLAGYFMQVAHLERTGHYLTFRDKDDQVVHLHPSNCL------DHKP-EWVVYNEY 239
Query: 849 MLTSKEFIRDCITFDKYEWLTETMPHIYK 877
+ TS+ FIR +T + EWL + PH YK
Sbjct: 240 VFTSRNFIR-TVTHIRGEWLVDVAPHYYK 267
>Hs22052719 [K] KOG0921 Dosage compensation complex subunit MLE
Length = 688
Score = 70.5 bits (171), Expect = 1e-11
Identities = 58/225 (25%), Positives = 110/225 (48%), Gaps = 19/225 (8%)
Query: 472 LSKLDNTKFPDLLVVPIYA-----NLPQE--QQSKIFEPTPKNCRKVVLATNIAETSLTI 524
+S+L+ + P LV ++ N+P+ +Q K+F+P P KV+L+TNIAETS+ I
Sbjct: 267 MSQLNEKETPFELVEALFKYIETLNIPRAVLEQRKVFDPVPVGVTKVILSTNIAETSIII 326
Query: 525 DGIKFVVDPGFVKEQSYS--GGVSKLVTVPCSRASVDQRAGRAGRLGPGKCFRLFTKWSY 582
+ + +VVD K + ++ ++ TV S+ +++Q G+ GR+ PG CF L ++ +
Sbjct: 327 NDV-YVVDSCKQKVKLFATHNNMTNYATVWGSKTNLEQWKGQPGRIRPGFCFHLCSR-AR 384
Query: 583 YNELEKVPKPEIXXXXXXXXXXXXXXXXXXXXXHFPMLDKPKTIQLS---EALENLYAIG 639
+ LE PE+ F + +T+ L EA L +
Sbjct: 385 FERLETHMTPEMFQTPLHEVALSIKLPCLVGIGQF-LAKAIETLPLDAVIEAEHTLRELD 443
Query: 640 ALNSRGAITKVGQVMCDFPCDPEYAKVIYSS----VFEESCNGVL 680
AL++ +T +G+++ + +P + K++ + E CN ++
Sbjct: 444 ALDANDDLTPLGRILANLLIEPRFGKMMIMEKTKILTTEGCNALI 488
>Hs22061649 [K] KOG0921 Dosage compensation complex subunit MLE
Length = 324
Score = 57.0 bits (136), Expect = 1e-07
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 14/106 (13%)
Query: 290 QPRRVAATSIASRVADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLNDPQ 349
QPRR++A S+A RVA E GK GY +R + + + T G+
Sbjct: 122 QPRRISAVSVAERVAFERGEETGKSCGYTVRIESVLPRFHASITFCTVGI---------- 171
Query: 350 LSSYSAIMIDEAHERTLSTDILLGLLRGILQDRKDLRLIISSATMN 395
S + + E HER ++TD LL +LR + Q ++ +++ SAT++
Sbjct: 172 ----SHVTVGEIHERDINTDFLLIVLRDVFQAYPEVHIVLMSATID 213
>7291655_1 [A] KOG0920 ATP-dependent RNA helicase A
Length = 514
Score = 56.6 bits (135), Expect = 2e-07
Identities = 41/160 (25%), Positives = 76/160 (46%), Gaps = 3/160 (1%)
Query: 245 EILDSIRQHQILIVVGETGSGKTTQLPQFLVEDGYTNDGKC-VVCTQPRRVAATSIASRV 303
EIL S+ ++++ K+ LP +++D ++C + + + AT + R
Sbjct: 156 EILQSLYASRVIVYNAALCWDKSVFLPLVILDDCRNKKSNVKIMCIERQAILATYNSQRT 215
Query: 304 ADEMDVILGKEVGYNIRFDDRTTPDKTILKYTTDGMLLREFLNDPQLSSYSAIMIDEAHE 363
A+ LG+ VG + + + T + Y+T LR L Q + S +++++ H
Sbjct: 216 ANFFGEQLGETVGIQLPYFSAVS-SSTFIIYSTAQYFLRS-LTSQQFRNISHLVVNDVHL 273
Query: 364 RTLSTDILLGLLRGILQDRKDLRLIISSATMNATKFSKFF 403
TDILL +R L ++LR+++ S N KF+ FF
Sbjct: 274 HDPYTDILLSEIRMALSSHQNLRVVLLSQMGNPKKFTDFF 313
>Hs12383070_1 [A] KOG0920 ATP-dependent RNA helicase A
Length = 529
Score = 54.3 bits (129), Expect = 8e-07
Identities = 44/217 (20%), Positives = 98/217 (44%), Gaps = 14/217 (6%)
Query: 621 DKPKTIQLSEALENLYAIGALNSRGAITKVGQVMCDFPCDPEYAKVIYSSVFEESCNGVL 680
+ P + + A++ L I A+++ +T++G + D P +P K++ +V + L
Sbjct: 40 EPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKC----L 95
Query: 681 PEIVTIVSMLQESNSIFVPGLNSEEKTKLFGSLMQS----SDHMLYLWIYEQWEE---NG 733
I+T+ L + +P S+++ + + SDHM L ++ W++ +G
Sbjct: 96 DPILTVACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGAFSDHMALLRAFQAWQKARSDG 155
Query: 734 YSRRWCQDFKLQHKTMKRVLRIRQQLWKYCRKQDFLLKHDQNLTQLKENMPRSVIEAKII 793
+ R +C+ L TM+ ++ +R QL R F+ +++ S A +
Sbjct: 156 WERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGG--DIRDVNTNSENWAVVK 213
Query: 794 KCFISGFPTNIAKLSKQGYTNI-KQDLSVSVHPSSVI 829
++G N+ + ++ + ++ V HP+SV+
Sbjct: 214 AALVAGMYPNLVHVDRENLVSTGPKEKKVRFHPASVL 250
>HsM13375825 [A] KOG0922 DEAH-box RNA helicase
Length = 294
Score = 52.8 bits (125), Expect = 2e-06
Identities = 53/234 (22%), Positives = 106/234 (44%), Gaps = 28/234 (11%)
Query: 654 MCDFPCDPEYAKVIYSSVFEESCNGVLPEIVTIVSMLQESNSIFVPGLNSEEKTK----- 708
M +FP P + + + + +LP I +ML N +F+ ++ E + +
Sbjct: 1 MVEFPLPPHLTCAVIKAASLDCEDLLLP----IAAMLSVEN-VFIRPVDPEYQKEAEQRH 55
Query: 709 --LFGSLMQSSDHMLYLWIYEQWEENGYSRRWCQDFKLQHKTMKRVLRIRQQLWKYCRKQ 766
L +D I+EQ + +G WCQ + + + R+ QL + RK
Sbjct: 56 RELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRK- 114
Query: 767 DFLLKHDQNLTQLKENMPRSVIEAKIIKCFISGFPTNIAKLSKQGYTNIKQD---LSVSV 823
LK + + P+ + + +C +G+ N+A+ S G T D V +
Sbjct: 115 ---LKQQSDFPKETFEGPKHEV---LRRCLCAGYFKNVARRS-VGRTFCTMDGRGSPVHI 167
Query: 824 HPSSVIFNRMKQEGKPMKYILYQSLMLTSKEFIRDCITFDKYEWLTETMPHIYK 877
HPSS + +QE K +++I++ +++T+K + R + +YEW+ + +P +++
Sbjct: 168 HPSSALH---EQETK-LEWIIFHEVLVTTKVYAR-IVCPIRYEWVRDLLPKLHE 216
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.134 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,481,586
Number of Sequences: 60738
Number of extensions: 2225249
Number of successful extensions: 8349
Number of sequences better than 1.0e-05: 91
Number of HSP's better than 0.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 7612
Number of HSP's gapped (non-prelim): 147
length of query: 877
length of database: 30,389,216
effective HSP length: 115
effective length of query: 762
effective length of database: 23,404,346
effective search space: 17834111652
effective search space used: 17834111652
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)