ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI1716 good U KOG3296 Intracellular trafficking, secretion, and vesicular transport Translocase of outer mitochondrial membrane complex, subunit TOM40
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI1716 614633 613473 -387
(387 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YMR203w [U] KOG3296 Translocase of outer mitochondrial membrane ... 597 e-170
SPBC27B12.13 [U] KOG3296 Translocase of outer mitochondrial memb... 256 4e-68
SPBPI065A [U] KOG3296 Translocase of outer mitochondrial membran... 168 1e-41
7290829 [U] KOG3296 Translocase of outer mitochondrial membrane ... 117 4e-26
SPBPI065B [U] KOG3296 Translocase of outer mitochondrial membran... 110 5e-24
At1g50400 [U] KOG3296 Translocase of outer mitochondrial membran... 97 3e-20
7302172 [U] KOG3296 Translocase of outer mitochondrial membrane ... 89 8e-18
At3g20000 [U] KOG3296 Translocase of outer mitochondrial membran... 86 7e-17
Hs5174723 [U] KOG3296 Translocase of outer mitochondrial membran... 86 1e-16
Hs21362030 [U] KOG3296 Translocase of outer mitochondrial membra... 76 7e-14
>YMR203w [U] KOG3296 Translocase of outer mitochondrial membrane complex
subunit TOM40
Length = 387
Score = 597 bits (1538), Expect = e-170
Identities = 277/384 (72%), Positives = 336/384 (87%)
Query: 3 NSPVPLGDFSKISTLPGISPITPEQRGESFWSSNPISSYLIDTYNNIHAHRKTLSLVNPG 62
++P PL + S+I T+P +SP+T +Q +F+SSNPISS+++DTY +H+HR++L LVNPG
Sbjct: 2 SAPTPLAEASQIPTIPALSPLTAKQSKGNFFSSNPISSFVVDTYKQLHSHRQSLELVNPG 61
Query: 63 TVENLNKEVSRDVFLTQYFFTGLRADLNKTFAFNPAFQTSHTFSMGSESLPNYAFSALFA 122
TVENLNKEVSRDVFL+QYFFTGLRADLNK F+ NPAFQTSHTFS+GS++LP YAFSALFA
Sbjct: 62 TVENLNKEVSRDVFLSQYFFTGLRADLNKAFSMNPAFQTSHTFSIGSQALPKYAFSALFA 121
Query: 123 NDNLFMQGNVDNQMSLSGRLQYGWDKNNVTKVTLQISEGQPTMCQLEQDYQASDFSLNFK 182
NDNLF QGN+DN +S+SGRL YGWDK N++KV LQIS+GQPTMCQLEQDYQASDFS+N K
Sbjct: 122 NDNLFAQGNIDNDLSVSGRLNYGWDKKNISKVNLQISDGQPTMCQLEQDYQASDFSVNVK 181
Query: 183 TLNPSAASDGSFTGVAVGSILQSITPQLAIGLEAIYSKGQAMSPADAAVSYMTRFVSAKQ 242
TLNPS + G FTGVAV S LQS+TPQLA+GLE +YS+ +P DA VSY+TR+VS KQ
Sbjct: 182 TLNPSFSEKGEFTGVAVASFLQSVTPQLALGLETLYSRTDGSAPGDAGVSYLTRYVSKKQ 241
Query: 243 DWIFSGQLQANGAAVASFWRKVSPNMEAGLETSLQASMLPIMDPVIGQPIGFQPAIEGAT 302
DWIFSGQLQANGA +AS WRKV+ N+EAG+ET+LQA M+PI DP++G PIG QP +EG+T
Sbjct: 242 DWIFSGQLQANGALIASLWRKVAQNVEAGIETTLQAGMVPITDPLMGTPIGIQPTVEGST 301
Query: 303 TLGCKYEYRQSVFRGSIDSNGKVGCFLERKILPTLSVLFCGEIDHFKNESKLGAGLQFET 362
T+G KYEYRQSV+RG++DSNGKV CFLERK+LPTLSVLFCGEIDHFKN++K+G GLQFET
Sbjct: 302 TIGAKYEYRQSVYRGTLDSNGKVACFLERKVLPTLSVLFCGEIDHFKNDTKIGCGLQFET 361
Query: 363 AGSEELLMMQQGLDINGNPLQAPP 386
AG++ELLM+QQGLD +GNPLQA P
Sbjct: 362 AGNQELLMLQQGLDADGNPLQALP 385
>SPBC27B12.13 [U] KOG3296 Translocase of outer mitochondrial membrane complex
subunit TOM40
Length = 309
Score = 256 bits (654), Expect = 4e-68
Identities = 129/309 (41%), Positives = 201/309 (64%), Gaps = 28/309 (9%)
Query: 49 IHAHRKTLSLVNPGTVENLNKEVSRDVFLTQYFFTGLRADLNKTFAFNPAFQTSHTFSMG 108
I +++ +L+L+NPGT ENL+KEVS+D+ L+ Y FTG+RAD+ K F +P F SH F++G
Sbjct: 18 IDSYKSSLNLINPGTCENLSKEVSKDILLSNYAFTGVRADVTKGFCTSPWFTVSHAFALG 77
Query: 109 SESLPNYAFSALFANDNLFMQGNVDNQMSLSGRLQYGWDKNNVTKVTLQISEGQ-PTMCQ 167
S+ LP Y+FS +F + LF++G+VDN ++ L W+ N ++KV +Q+S G P MCQ
Sbjct: 78 SQVLPPYSFSTMFGGEPLFLRGSVDNDGAVQAMLNCTWNSNVLSKVQMQLSNGAVPNMCQ 137
Query: 168 LEQDYQASDFSLNFKTLNPSAASDGSFTGVAVGSILQSITPQLAIGLEAIYSK-GQAMSP 226
+E D++ DFS +FK +NP + TG+ + S+LQS+TP+L++G+EA++ K ++ P
Sbjct: 138 IEHDHKGKDFSFSFKAMNP--WYEEKLTGIYIISLLQSVTPKLSLGVEALWQKPSSSIGP 195
Query: 227 ADAAVSYMTRFVSAKQDWIFSGQLQ-ANGAAVASFWRKVSPNMEAGLETSLQASMLPIMD 285
+A +SYMTR+ +A DWI + L + G A+FWRK+SP +EAG+E L
Sbjct: 196 EEATLSYMTRYNAA--DWIATAHLNGSQGDVTATFWRKLSPKVEAGVECQL--------- 244
Query: 286 PVIGQPIGFQ--------PAIEGATTLGCKYEYRQSVFRGSIDSNGKVGCFLERKILPTL 337
P+G P EG T++G KYE+ QS++RG +DS G+VG +LER++ P +
Sbjct: 245 ----SPVGLNHSAALMTGPKPEGLTSVGVKYEFAQSIYRGQVDSKGRVGVYLERRLAPAI 300
Query: 338 SVLFCGEID 346
++ F E+D
Sbjct: 301 TLAFSSELD 309
>SPBPI065A [U] KOG3296 Translocase of outer mitochondrial membrane complex
subunit TOM40
Length = 196
Score = 168 bits (426), Expect = 1e-41
Identities = 78/173 (45%), Positives = 123/173 (71%), Gaps = 3/173 (1%)
Query: 49 IHAHRKTLSLVNPGTVENLNKEVSRDVFLTQYFFTGLRADLNKTFAFNPAFQTSHTFSMG 108
I +++ +L+L+NPGT ENL+KEVS+D+ L+ Y FTG+RAD+ K F +P F SH F++G
Sbjct: 18 IDSYKSSLNLINPGTCENLSKEVSKDILLSNYAFTGVRADVTKGFCTSPWFTVSHAFALG 77
Query: 109 SESLPNYAFSALFANDNLFMQGNVDNQMSLSGRLQYGWDKNNVTKVTLQISEGQ-PTMCQ 167
S+ LP Y+FS +F + LF++G+VDN ++ L W+ N ++KV +Q+S G P MCQ
Sbjct: 78 SQVLPPYSFSTMFGGEPLFLRGSVDNDGAVQAMLNCTWNSNVLSKVQMQLSNGAVPNMCQ 137
Query: 168 LEQDYQASDFSLNFKTLNPSAASDGSFTGVAVGSILQSITPQLAIGLEAIYSK 220
+E D++ DFS +FK +NP + TG+ + S+LQS+TP+L++G+EA++ K
Sbjct: 138 IEHDHKGKDFSFSFKAMNP--WYEEKLTGIYIISLLQSVTPKLSLGVEALWQK 188
>7290829 [U] KOG3296 Translocase of outer mitochondrial membrane complex
subunit TOM40
Length = 344
Score = 117 bits (292), Expect = 4e-26
Identities = 97/322 (30%), Positives = 152/322 (47%), Gaps = 44/322 (13%)
Query: 51 AHRKTLSLVNPGTVENLNKEVSRDVFLTQYFFTGLRADLNKTFAFNPAFQTSHTFSMGSE 110
A K +L NPGTVE L+K+ +T F G + LNK + + FQ SHT +M +
Sbjct: 50 AAAKDAALENPGTVEELHKKCKDIQAIT---FEGAKIMLNKGLSNH--FQVSHTINMSNV 104
Query: 111 SLPNYAFSALFANDNLF--------MQGNVDNQMSLSGRLQYGWDKNNVTKVTLQISEGQ 162
Y F A + F + G++D +L+ + + + K QI E +
Sbjct: 105 VPSGYRFGATYVGTKEFSPTEAFPVLLGDIDPAGNLNANVIHQFSARLRCKFASQIQESK 164
Query: 163 PTMCQLEQDYQASDFSLNFKTLNPSAASDGSFTGVAVGSILQSITPQLAIGLEAIYSKGQ 222
QL DY+ SD++L+ NPS ++ +GV VG LQS+TP LA+G E Y G
Sbjct: 165 VVASQLTTDYRGSDYTLSLTVANPSIFTN---SGVVVGQYLQSVTPALALGSELAYQFGP 221
Query: 223 AMSPADAAV-SYMTRFVSAKQDWIFSGQLQANGAAVASFWRKVSPNMEAG--LETSLQAS 279
+ A+ S + R+ + W SG L +G V +++K S ++ G +ETSL+
Sbjct: 222 NVPGRQIAIMSVVGRYTAGSSVW--SGTLGQSGLHVC-YYQKASDQLQIGAEVETSLRMQ 278
Query: 280 MLPIMDPVIGQPIGFQPAIEGATTLGCKYEYRQS--VFRGSIDSNGKVGCFLERKILP-T 336
E TL + + ++ VFRG IDSN ++ LE+++ P
Sbjct: 279 -------------------ESVATLAYQIDLPKANLVFRGGIDSNWQIFGVLEKRLAPLP 319
Query: 337 LSVLFCGEIDHFKNESKLGAGL 358
++ G ++H KN +LG GL
Sbjct: 320 FTLALSGRMNHVKNNFRLGCGL 341
>SPBPI065B [U] KOG3296 Translocase of outer mitochondrial membrane complex
subunit TOM40
Length = 142
Score = 110 bits (274), Expect = 5e-24
Identities = 58/149 (38%), Positives = 86/149 (56%), Gaps = 24/149 (16%)
Query: 234 MTRFVSAKQDWIFSGQLQAN-GAAVASFWRKVSPNMEAGLETSLQASMLPIMDPVIGQPI 292
MTR+ +A DWI + L + G A+FWRK+SP +EAG+E L P+
Sbjct: 1 MTRYNAA--DWIATAHLNGSQGDVTATFWRKLSPKVEAGVECQLS-------------PV 45
Query: 293 GFQ--------PAIEGATTLGCKYEYRQSVFRGSIDSNGKVGCFLERKILPTLSVLFCGE 344
G P EG T++G KYE+ QS++RG +DS G+VG +LER++ P +++ F E
Sbjct: 46 GLNHSAALMTGPKPEGLTSVGVKYEFAQSIYRGQVDSKGRVGVYLERRLAPAITLAFSSE 105
Query: 345 IDHFKNESKLGAGLQFETAGSEELLMMQQ 373
+DH +K+G GL E GS+E++ QQ
Sbjct: 106 LDHPNRNAKVGLGLSLELPGSDEMIQQQQ 134
>At1g50400 [U] KOG3296 Translocase of outer mitochondrial membrane complex
subunit TOM40
Length = 310
Score = 97.4 bits (241), Expect = 3e-20
Identities = 92/339 (27%), Positives = 140/339 (41%), Gaps = 51/339 (15%)
Query: 35 SNPISSYLIDTYNNIHAHRKTLSLVNPGTVENLNKEVSRDVFLTQYFFTGLRADLNKTFA 94
S PI++ +D + +L P E LN+E + + L F G R D NK+
Sbjct: 5 SPPINTAQVDAKTKLDEKVDYSNLPCPVLYEELNREAT--MALKPELFEGFRLDYNKSL- 61
Query: 95 FNPAFQTSHTFSMGSESLPN--------------YAFSALFANDNLFMQGNVDNQMSLSG 140
N F SH+ MG +PN Y F A F + L++ G + L+
Sbjct: 62 -NQKFFLSHSILMGPTEVPNPTPSSEIIKIPTANYDFGAGFIDPKLYLIGRITTDGRLNA 120
Query: 141 RLQYGWDKNNVTKVT-LQISEGQPTMCQLEQDYQASDFSLNFKTLNPSAASDGSFTGVAV 199
R ++ N K L E + L DY+ SD+ + N S V
Sbjct: 121 RAKFDLTDNFSVKANALLTDEEDKSQGHLVIDYKGSDYRTQLQLGNNS---------VYA 171
Query: 200 GSILQSITPQLAIGLEAIYSKGQAMSPADAAVSYMTRFVSAKQDWIFSGQLQANGAAVAS 259
+ +Q +TP L++G EA + Q MS V Y R+ + K + SGQ+ + G AV +
Sbjct: 172 ANYIQHVTPHLSLGGEAFWLGQQLMS----GVGYAARYETDKT--VASGQIASTGVAVMN 225
Query: 260 FWRKVSPNMEAGLETSLQASMLPIMDPVIGQPIGFQPAIEGATTLGCKYEYRQSVFRGSI 319
+ KVS + T + L + + ++G RQS RG +
Sbjct: 226 YVHKVSEKL--SFATDFIYNYL---------------SRDVTASVGYDLITRQSRLRGKV 268
Query: 320 DSNGKVGCFLERKILPTLSVLFCGEIDHFKNESKLGAGL 358
DSNG V +LE ++ L L E+DH K + K G G+
Sbjct: 269 DSNGVVAAYLEEQLPIGLRFLLSAEVDHVKKDYKFGFGV 307
>7302172 [U] KOG3296 Translocase of outer mitochondrial membrane complex
subunit TOM40
Length = 340
Score = 89.4 bits (220), Expect = 8e-18
Identities = 89/324 (27%), Positives = 141/324 (43%), Gaps = 44/324 (13%)
Query: 49 IHAHRKTLSLVNPGTVENLNKEVSRDVFLTQYFFTGLRADLNKTFAFNPAFQTSHTFSMG 108
+ A K L NPGT+E L+ RD+ F G + +NK + + FQ +HT +M
Sbjct: 44 LKAEAKKPELTNPGTLEELHSRC-RDIQANT--FEGAKIMVNKGLSNH--FQVTHTINMN 98
Query: 109 SESLPNYAFSALFANDNLF--------MQGNVDNQMSLSGRLQYGWDKNNVTKVTLQISE 160
S Y F A + + + G +D +L+ + + K Q +
Sbjct: 99 SAGPSGYRFGATYVGTKQYGPTEAFPVLLGEIDPMGNLNANVIHQLTSRLRCKFASQFQD 158
Query: 161 GQPTMCQLEQDYQASDFSLNFKTLNPSAASDGSFT--GVAVGSILQSITPQLAIGLEAIY 218
+ QL DY+ D++L NP G FT GV V LQS+T +LA+G E Y
Sbjct: 159 SKLVGTQLTGDYRGRDYTLTLTMGNP-----GFFTSSGVFVCQYLQSVTKRLALGSEFAY 213
Query: 219 SKGQAMSPADAAV-SYMTRFVSAKQDWIFSGQLQANGAAVASFWRKVSPNMEAGLETSLQ 277
G + AV S + R+ A D ++S L G + S+++K S ++ G+E
Sbjct: 214 HYGPNVPGRQVAVLSAVGRY--AFGDTVWSCTLGPAGFHL-SYYQKASDQLQIGVEVETN 270
Query: 278 ASMLPIMDPVIGQPIGFQPAIEGATTLGCKYEYRQS--VFRGSIDSNGKVGCFLERKILP 335
E T+ + + ++ VFRGS+DSN + LE+++ P
Sbjct: 271 IRQQ-----------------ESTATVAYQIDLPKADLVFRGSLDSNWLISGVLEKRLQP 313
Query: 336 -TLSVLFCGEIDHFKNESKLGAGL 358
S+ G ++H KN +LG GL
Sbjct: 314 LPFSLAISGRMNHQKNSFRLGCGL 337
>At3g20000 [U] KOG3296 Translocase of outer mitochondrial membrane complex
subunit TOM40
Length = 309
Score = 86.3 bits (212), Expect = 7e-17
Identities = 85/336 (25%), Positives = 137/336 (40%), Gaps = 50/336 (14%)
Query: 37 PISSYLIDTYNNIHAHRKTLSLVNPGTVENLNKEVSRDVFLTQYFFTGLRADLNKTFAFN 96
P+++ +D + +L +P E L++E L F GLR D + A N
Sbjct: 7 PLTAAQVDAKTKVDEKVDYSNLPSPVPYEELHREALMS--LKSDNFEGLRFDFTR--ALN 62
Query: 97 PAFQTSHTFSMGSESLP-------------NYAFSALFANDNLFMQGNVDNQMSLSGRLQ 143
F SH+ MG +P +Y F A + + L + G V L+ RL+
Sbjct: 63 QKFSLSHSVMMGPTEVPAQSPETTIKIPTAHYEFGANYYDPKLLLIGRVMTDGRLNARLK 122
Query: 144 YGWDKNNVTKVTLQIS-EGQPTMCQLEQDYQASDFSLNFKTLNPSAASDGSFTGVAVGSI 202
V K I+ E + DY SD+ + L SA ++
Sbjct: 123 ADLTDKLVVKANALITNEEHMSQAMFNFDYMGSDYRAQLQ-LGQSALIGATY-------- 173
Query: 203 LQSITPQLAIGLEAIYSKGQAMSPADAAVSYMTRFVSAKQDWIFSGQLQANGAAVASFWR 262
+QS+T L++G E + A P + + Y R+ + K + SGQ+ + GA V ++ +
Sbjct: 174 IQSVTNHLSLGGEIFW----AGVPRKSGIGYAARYETDKM--VASGQVASTGAVVMNYVQ 227
Query: 263 KVSPNMEAGLETSLQASMLPIMDPVIGQPIGFQPAIEGATTLGCKYEYRQSVFRGSIDSN 322
K+S + L T + + + ++G Y RQ+ RG IDSN
Sbjct: 228 KISDKVS--LATDFMYNYF---------------SRDVTASVGYDYMLRQARVRGKIDSN 270
Query: 323 GKVGCFLERKILPTLSVLFCGEIDHFKNESKLGAGL 358
G LE ++ L+ L E+DH K + K G GL
Sbjct: 271 GVASALLEERLSMGLNFLLSAELDHKKKDYKFGFGL 306
>Hs5174723 [U] KOG3296 Translocase of outer mitochondrial membrane complex
subunit TOM40
Length = 361
Score = 85.5 bits (210), Expect = 1e-16
Identities = 80/310 (25%), Positives = 139/310 (44%), Gaps = 37/310 (11%)
Query: 58 LVNPGTVENLNKEVSRDVFLTQYFFTGLRADLNKTFAFNPAFQTSHTFSMGSESLPNYAF 117
L NPGT E +++ +++F Q G++ +NK + + FQ +HT ++ + NY F
Sbjct: 77 LPNPGTFEECHRKC-KELFPIQ--MEGVKLTVNKGLSNH--FQVNHTVALSTIGESNYHF 131
Query: 118 SALFANDNLF--------MQGNVDNQMSLSGRLQYGWDKNNVTKVTLQISEGQPTMCQLE 169
+ + G++DN SL+ ++ + +K+ +Q + + Q++
Sbjct: 132 GVTYVGTKQLSPTEAFPVLVGDMDNSGSLNAQVIHQLGPGLRSKMAIQTQQSKFVNWQVD 191
Query: 170 QDYQASDFSLNFKTLNPSAASDGSFTGVAVGSILQSITPQLAIGLEAIYSKGQAMSPADA 229
+Y+ SDF+ NP +G+ V LQSITP LA+G E +Y + P +
Sbjct: 192 GEYRGSDFTAAVTLGNPDVLVG---SGILVAHYLQSITPCLALGGELVYHR----RPGEE 244
Query: 230 AVSYMTRFVSAKQDWIFSGQLQANGAAVASFWRKVSPNMEAGLETSLQASMLPIMDPVIG 289
+W+ + L G A+++ K S ++ G+E M D +
Sbjct: 245 GTVMSLAGKYTLNNWLATVTLGQAGMH-ATYYHKASDQLQVGVEFEASTRM---QDTSVS 300
Query: 290 QPIGFQPAIEGATTLGCKYEYRQSVFRGSIDSNGKVGCFLERKILPTLSVLFCGE-IDHF 348
G+Q + A L F+GS+DSN VG LE+K+ P L G ++H
Sbjct: 301 --FGYQLDLPKANLL----------FKGSVDSNWIVGATLEKKLPPLPLTLALGAFLNHR 348
Query: 349 KNESKLGAGL 358
KN+ + G GL
Sbjct: 349 KNKFQCGFGL 358
>Hs21362030 [U] KOG3296 Translocase of outer mitochondrial membrane complex
subunit TOM40
Length = 308
Score = 76.3 bits (186), Expect = 7e-14
Identities = 76/312 (24%), Positives = 138/312 (43%), Gaps = 37/312 (11%)
Query: 53 RKTLSLVNPGTVENLNKEVSRDVFLTQYFFTGLRADLNKTFAFNPAFQTSHTFSMGSESL 112
R+ L NPG+ + L++ + +DVF Q G++ +NK + + FQ +HT M + L
Sbjct: 19 RREEPLPNPGSFDELHR-LCKDVFPAQ--MEGVKLVVNKVLSSH--FQVAHTIHMSALGL 73
Query: 113 PNYAFSALFAND------NLF--MQGNVDNQMSLSGRLQYGWDKNNVTKVTLQISEGQPT 164
P Y A +A D +F + G++D+ SL+ ++ + K Q + +
Sbjct: 74 PGYHLHAAYAGDWQLSPTEVFPTVVGDMDSSGSLNAQVLLLLAERLRAKAVFQTQQAKFL 133
Query: 165 MCQLEQDYQASDFSLNFKTLNPSAASDGSFTGVAVGSILQSITPQLAIGLEAIYSKGQAM 224
Q + +Y+ D++ NP + + V LQS+T +L +G E +Y +
Sbjct: 134 TWQFDGEYRGDDYTATLTLGNPDLIGESV---IMVAHFLQSLTHRLVLGGELVYHRRPG- 189
Query: 225 SPADAAVSYMTRFVSAKQDWIFSGQLQANGAAVASFWRKVSPNMEAGLETSLQASMLPIM 284
+ A+ + SA W+ + + +G A AS++ + + ++ G+E +
Sbjct: 190 --EEGAILTLAGKYSAVH-WVATLNV-GSGGAHASYYHRANEQVQVGVEFEANTRL---Q 242
Query: 285 DPVIGQPIGFQPAIEGATTLGCKYEYRQSVFRGSIDSNGKVGCFLERKILPTLSVLFCGE 344
D G+ + A VFRG +DSN VG LE+K+ P L G
Sbjct: 243 DTTFS--FGYHLTLPQANM----------VFRGLVDSNWCVGAVLEKKMPPLPVTLALGA 290
Query: 345 -IDHFKNESKLG 355
++H++N G
Sbjct: 291 FLNHWRNRFHCG 302
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.316 0.132 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,016,837
Number of Sequences: 60738
Number of extensions: 963636
Number of successful extensions: 1976
Number of sequences better than 1.0e-05: 10
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1945
Number of HSP's gapped (non-prelim): 12
length of query: 387
length of database: 30,389,216
effective HSP length: 108
effective length of query: 279
effective length of database: 23,829,512
effective search space: 6648433848
effective search space used: 6648433848
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)