ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI1737 good R KOG2981 General function prediction only Protein involved in autophagocytosis during starvation
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI1737 621021 621926 302
(302 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YNR007c [R] KOG2981 Protein involved in autophagocytosis during ... 320 1e-87
SPBC3B9.06c [R] KOG2981 Protein involved in autophagocytosis dur... 180 2e-45
7293868 [R] KOG2981 Protein involved in autophagocytosis during ... 158 1e-38
Hs19526773 [R] KOG2981 Protein involved in autophagocytosis duri... 156 4e-38
CE25486 [R] KOG2981 Protein involved in autophagocytosis during ... 148 8e-36
At5g61500 [R] KOG2981 Protein involved in autophagocytosis durin... 148 8e-36
>YNR007c [R] KOG2981 Protein involved in autophagocytosis during starvation
Length = 310
Score = 320 bits (821), Expect = 1e-87
Identities = 163/311 (52%), Positives = 210/311 (67%), Gaps = 10/311 (3%)
Query: 1 MLRSTLSNWREYLTPISHTSTFETSGQLTPEEFVKAGDYLVHMFPTWKWNGNDFQNVHHK 60
M+RSTLS+WREYLTPI+H STF T+GQ+TPEEFV+AGDYL HMFPTWKWN + ++ ++
Sbjct: 1 MIRSTLSSWREYLTPITHKSTFLTTGQITPEEFVQAGDYLCHMFPTWKWN-EESSDISYR 59
Query: 61 DFLPNDKQFLVTKKVPCKLRANNYLELDDTET-----KDVGDGWALQEEHSQDSERKSTN 115
DFLP +KQFL+ +KVPC RA +E++ + + GD + E ++E +
Sbjct: 60 DFLPKNKQFLIIRKVPCDKRAEQCVEVEGPDVIMKGFAEDGDEDDVLEYIGSETEHVQST 119
Query: 116 NADDSXXXXXXXXXHIVXXXXXXXXXXXXXXNEFADDDIVDIRPSTLRFYDLYITYSTSY 175
A + ++ EF + + R+YDLYI YSTSY
Sbjct: 120 PAGGTKDSSIDDIDELIQDMEIKEEDENDDTEEFNAKGGLAKDMAQERYYDLYIAYSTSY 179
Query: 176 RVPKMYLCGYDNDGTPLSPDQMFEDIAADYRSKTATIEPLPFLKGNNISVSIHPCKHANV 235
RVPKMY+ G++++G+PLSP+QMFEDI+ADYR+KTATIE LPF K + +SVSIHPCKHANV
Sbjct: 180 RVPKMYIVGFNSNGSPLSPEQMFEDISADYRTKTATIEKLPFYKNSVLSVSIHPCKHANV 239
Query: 236 MKVLMEKVXXXXXXARK--VDPQTTD--EDWEDLQSDVDDGLRVDQYLVVFLKFITSVTP 291
MK+L++KV RK + Q D DWEDLQ D+DD LRVDQYL+VFLKFITSVTP
Sbjct: 240 MKILLDKVRVVRQRRRKELQEEQELDGVGDWEDLQDDIDDSLRVDQYLIVFLKFITSVTP 299
Query: 292 GIEHDYTMEGW 302
I+HDYTMEGW
Sbjct: 300 SIQHDYTMEGW 310
>SPBC3B9.06c [R] KOG2981 Protein involved in autophagocytosis during starvation
Length = 275
Score = 180 bits (457), Expect = 2e-45
Identities = 109/310 (35%), Positives = 155/310 (49%), Gaps = 51/310 (16%)
Query: 2 LRSTLSNWREYLTPISHTSTFETSGQLTPEEFVKAGDYLVHMFPTWKWNGNDFQNVHHKD 61
L S NWRE++TP S TS FE +G ++PEEFV AGDYLV FPTW W D +
Sbjct: 5 LTSAFLNWREHITPASKTSDFENTGMISPEEFVLAGDYLVSKFPTWSWECGD----RIRG 60
Query: 62 FLPNDKQFLVTKKVPCKLRANNY--------LELDDTETKDVG-DGWALQEEHSQDSERK 112
FLP DKQ+LVT+ V C R N +E DDT KD D A+ HS S+
Sbjct: 61 FLPKDKQYLVTRHVFCVQRNINIGVNEEWVDIETDDTRNKDDDQDDDAISSIHSDTSDIA 120
Query: 113 STNNADDSXXXXXXXXXHIVXXXXXXXXXXXXXXNEFADDDIVD--IRPSTLRFYDLYIT 170
S +E DD +V I+ R+YDLYI
Sbjct: 121 SAERLKGQSKELSDSGP-------------LPLKDEEDDDQMVSPVIKEDEGRYYDLYIV 167
Query: 171 YSTSYRVPKMYLCGYDNDGTPLSPDQMFEDIAADYRSKTATIEPLPFLKGNNISVSIHPC 230
Y YR P+++L G++ G L+ ++ED++ ++ KT T+EP P +N S+HPC
Sbjct: 168 YDKYYRTPRLFLRGWNAGGQLLTMKDIYEDVSGEHAGKTVTMEPFPHYHSHNTMASVHPC 227
Query: 231 KHANVMKVLMEKVXXXXXXARKVDPQTTDEDWEDLQSDVDDGLRVDQYLVVFLKFITSVT 290
KHA+V+ L+++ + +D +RVDQY+V+FLKF++++
Sbjct: 228 KHASVLLKLIKQ-----------------------HRERNDPIRVDQYMVLFLKFVSTML 264
Query: 291 PGIEHDYTME 300
P E DYT++
Sbjct: 265 PYFEIDYTIQ 274
>7293868 [R] KOG2981 Protein involved in autophagocytosis during starvation
Length = 330
Score = 158 bits (399), Expect = 1e-38
Identities = 104/343 (30%), Positives = 156/343 (45%), Gaps = 72/343 (20%)
Query: 2 LRSTLSNWREYLTPISHTSTFETSGQLTPEEFVKAGDYLVHMFPTWKWNGNDFQNVHHKD 61
++ T N EYLTP+ S F +G LTPEEFV AGD+LVH PTW+W D K
Sbjct: 8 VKGTALNVAEYLTPVLKESKFRETGVLTPEEFVAAGDHLVHHCPTWQWAAGD--ETKTKP 65
Query: 62 FLPNDKQFLVTKKVPCKLRANN--YLELDDTETKDVGDG-WALQEEHSQDSERKSTNNAD 118
+LP DKQFL+T+ VPC R Y+ + ++ GDG W + + D + +
Sbjct: 66 YLPKDKQFLITRNVPCYRRCKQMEYVGEETLVEEESGDGGWVETHQLNDDGTTQLEDKIC 125
Query: 119 DSXXXXXXXXXHIVXXXXXXXXXXXXXXNEFADD-------------DIVDIRPSTL--- 162
+ H +E D+ ++VD +T
Sbjct: 126 ELTMEETKEEMHTPDSDKSAPGAGGQAEDEDDDEAIDMDDFEESGMLELVDPAVATTTRK 185
Query: 163 ---------------------------RFYDLYITYSTSYRVPKMYLCGYDNDGTPLSPD 195
R YDL+I+Y Y+ P++++ GYD PL+ +
Sbjct: 186 PEPEAKASPVAAASGDAEASGDSVLHTRTYDLHISYDKYYQTPRLWVVGYDEQRKPLTVE 245
Query: 196 QMFEDIAADYRSKTATIEPLPFLKGNNISVSIHPCKHANVMKVLMEKVXXXXXXARKVDP 255
QM+ED++ D+ KT T+E P L G N++ S+HPC+HA++MK ++
Sbjct: 246 QMYEDVSQDHAKKTVTMESHPHLPGPNMA-SVHPCRHADIMKKII--------------- 289
Query: 256 QTTDEDWEDLQSDVDDGLRVDQYLVVFLKFITSVTPGIEHDYT 298
QT +E L V YL++FLKF+ +V P IE+D+T
Sbjct: 290 QTVEEG--------GGQLGVHLYLIIFLKFVQTVIPTIEYDFT 324
>Hs19526773 [R] KOG2981 Protein involved in autophagocytosis during starvation
Length = 314
Score = 156 bits (394), Expect = 4e-38
Identities = 104/319 (32%), Positives = 147/319 (45%), Gaps = 57/319 (17%)
Query: 11 EYLTPISHTSTFETSGQLTPEEFVKAGDYLVHMFPTWKWNGNDFQNVHHKDFLPNDKQFL 70
EYLTP+ S F+ +G +TPEEFV AGD+LVH PTW+W + V K +LP KQFL
Sbjct: 17 EYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEELKV--KAYLPTGKQFL 74
Query: 71 VTKKVPCKLRANNYLELDDTET---KDVGDGWALQEEHSQD----SERKSTNNADDSXXX 123
VTK VPC R D+ E +D GDG + H+ +E ++
Sbjct: 75 VTKNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNTGITGITEAVKEITLENKDNI 134
Query: 124 XXXXXXHIVXXXXXXXXXXXXXXNEFADDDIVDIRPSTL--------------------- 162
+ E+ + +++ +TL
Sbjct: 135 RLQDCSALCEEEEDEDEGEAADMEEYEESGLLETDEATLDTRKIVEACKAKTDAGGEDAI 194
Query: 163 ---RFYDLYITYSTSYRVPKMYLCGYDNDGTPLSPDQMFEDIAADYRSKTATIEPLPFLK 219
R YDLYITY Y+ P+++L GYD PL+ + M+EDI+ D+ KT TIE P L
Sbjct: 195 LQTRTYDLYITYDKYYQTPRLWLFGYDEQRQPLTVEHMYEDISQDHVKKTVTIENHPHLP 254
Query: 220 GNNISVSIHPCKHANVMKVLMEKVXXXXXXARKVDPQTTDEDWEDLQSDVDDGLRVDQYL 279
+ S+HPC+HA VMK ++E V ++ L V YL
Sbjct: 255 PPPM-CSVHPCRHAEVMKKIIETV-----------------------AEGGGELGVHMYL 290
Query: 280 VVFLKFITSVTPGIEHDYT 298
++FLKF+ +V P IE+DYT
Sbjct: 291 LIFLKFVQAVIPTIEYDYT 309
>CE25486 [R] KOG2981 Protein involved in autophagocytosis during starvation
Length = 305
Score = 148 bits (374), Expect = 8e-36
Identities = 100/321 (31%), Positives = 151/321 (46%), Gaps = 52/321 (16%)
Query: 2 LRSTLSNWREYLTPISHTSTFETSGQLTPEEFVKAGDYLVHMFPTWKWNG-NDFQNVHHK 60
L+S E TP+ S F +G LTPEE+V AGD+LVH PTWKW G +D + +
Sbjct: 8 LKSAALQIGETFTPVLRESKFRETGVLTPEEYVAAGDHLVHHCPTWKWAGASDPSKI--R 65
Query: 61 DFLPNDKQFLVTKKVPCKLRANNYLELDDTETKDVGD-----------GWA----LQEEH 105
FLP DKQFL+T+ VPC R +E D+ K + + GW ++EH
Sbjct: 66 TFLPIDKQFLITRNVPCHKRCKQ-MEYDEKLEKIINEEDGEYQTSDETGWVDTHHYEKEH 124
Query: 106 SQDSERKSTN--------NADDSXXXXXXXXXHIVXXXXXXXXXXXXXXNEFADDDIVDI 157
++ E++ + ++DD + A +
Sbjct: 125 EKNEEKEQSTAPPPAAPEDSDDDDEEPLDLDELGLDDDEEDPNRFVVEKKPLAAGNDNSG 184
Query: 158 RPSTLRFYDLYITYSTSYRVPKMYLCGYDNDGTPLSPDQMFEDIAADYRSKTATIEPLPF 217
+R YDL+I Y Y+VP+++L GYD + PL+ +Q +ED +AD+ +KT T+E P
Sbjct: 185 EVEKVRTYDLHICYDKYYQVPRLFLMGYDENRRPLTVEQTYEDFSADHSNKTITVEAHPS 244
Query: 218 LKGNNISVSIHPCKHANVMKVLMEKVXXXXXXARKVDPQTTDEDWEDLQSDVDDGLRVDQ 277
+ + ++HPCKHA +MK L+ + L V +
Sbjct: 245 V--DLTMPTVHPCKHAEMMKRLINQYAESGKV-----------------------LGVHE 279
Query: 278 YLVVFLKFITSVTPGIEHDYT 298
YL +FLKF+ +V P IE+DYT
Sbjct: 280 YLFLFLKFVQAVIPTIEYDYT 300
>At5g61500 [R] KOG2981 Protein involved in autophagocytosis during starvation
Length = 311
Score = 148 bits (374), Expect = 8e-36
Identities = 102/315 (32%), Positives = 144/315 (45%), Gaps = 52/315 (16%)
Query: 11 EYLTPISHTSTFETSGQLTPEEFVKAGDYLVHMFPTWKWNGNDFQNVHHKDFLPNDKQFL 70
E +T S F+ G L+ EFV AGD LV PTW W D K +LP+DKQFL
Sbjct: 16 ERITGPRTISAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGDASK--RKPYLPSDKQFL 73
Query: 71 VTKKVPCKLRANNYLELDDTETKDV------GDGWALQEEHSQDSERKSTNNADDSXXXX 124
+T+ VPC RA + E + +V DGW + E + + D
Sbjct: 74 ITRNVPCLRRAASVAEDYEAAGGEVLVDDEDNDGWLATHGKPKGKEEDNLPSMDALDINE 133
Query: 125 XXXXXHIVXXXXXXXXXXXXXXNEFAD-DDIVDIRPSTL------------------RFY 165
I EF + D++V+ P+TL R Y
Sbjct: 134 KNTIQSIPTYFGGEEDDDIPDMEEFDEADNVVENDPATLQSTYLVAHEPDDDNILRTRTY 193
Query: 166 DLYITYSTSYRVPKMYLCGYDNDGTPLSPDQMFEDIAADYRSKTATIEPLPFLKGNNISV 225
DL ITY Y+ P+++L GYD L P+ + ED++ D+ KT TIE P L G +
Sbjct: 194 DLSITYDKYYQTPRVWLTGYDESRMLLQPELVMEDVSQDHARKTVTIEDHPHLPGKH--A 251
Query: 226 SIHPCKHANVMKVLMEKVXXXXXXARKVDPQTTDEDWEDLQSDVDDGLRVDQYLVVFLKF 285
S+HPC+H VMK +++ + +R V+P+ VD+YL +FLKF
Sbjct: 252 SVHPCRHGAVMKKIIDVL-----MSRGVEPE------------------VDKYLFLFLKF 288
Query: 286 ITSVTPGIEHDYTME 300
+ SV P IE+DYTM+
Sbjct: 289 MASVIPTIEYDYTMD 303
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.135 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,040,534
Number of Sequences: 60738
Number of extensions: 750338
Number of successful extensions: 1656
Number of sequences better than 1.0e-05: 6
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1628
Number of HSP's gapped (non-prelim): 10
length of query: 302
length of database: 30,389,216
effective HSP length: 106
effective length of query: 196
effective length of database: 23,950,988
effective search space: 4694393648
effective search space used: 4694393648
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)