ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI1788 good W KOG3871 Extracellular structures Cell adhesion complex protein bystin
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI1788 638611 640044 478
(478 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YBR247c [W] KOG3871 Cell adhesion complex protein bystin 518 e-146
SPBC13G1.09 [W] KOG3871 Cell adhesion complex protein bystin 282 7e-76
Hs15208645 [W] KOG3871 Cell adhesion complex protein bystin 244 2e-64
7290847 [W] KOG3871 Cell adhesion complex protein bystin 236 4e-62
CE25013 [W] KOG3871 Cell adhesion complex protein bystin 233 4e-61
At1g31660 [W] KOG3871 Cell adhesion complex protein bystin 229 9e-60
>YBR247c [W] KOG3871 Cell adhesion complex protein bystin
Length = 483
Score = 518 bits (1333), Expect = e-146
Identities = 274/486 (56%), Positives = 326/486 (66%), Gaps = 13/486 (2%)
Query: 1 MGKVMGGSGRKQRHDPLLNDLDSQHGKLKRQGKKKIDAKDQKGH----EDEEFVDAQQSR 56
M + RKQRHDPLL DLD+ G LK+ KKK+ D H E++ ++D++ SR
Sbjct: 1 MARASSTKARKQRHDPLLKDLDAAQGTLKKINKKKLAQNDAANHDAANEEDGYIDSKASR 60
Query: 57 KIXXXXXXXXXXXXXXXXXXXXXXXXGINRFCVANYXXXXXXXXXXXXQ-GNNISXXXXX 115
KI RF +Y G +IS
Sbjct: 61 KILQLAKEQQDEIEGEELAESERNKQFEARFTTMSYDDEDEDEDEDEEAFGEDISDFEPE 120
Query: 116 XXXXXXXXXXXXXXXXXXXXXXMFDQYFKTSADFNSANGSYNLADKIMASIREKEMELQY 175
MF+QYFK S DFNS +GSYNLADKIMASIREKE +++
Sbjct: 121 GDYKEEEEIVEIDEEDAA----MFEQYFKKSDDFNSLSGSYNLADKIMASIREKESQVED 176
Query: 176 NEEEAGDAS----AVAEPAAPVDRTEGVALPPKVIQAYLAVGTIMQTWRHGKLPKLFKVL 231
+++ A+ + ++ + EGVALP KVI+AY VG+I++TW HGKLPKLFKV+
Sbjct: 177 MQDDEPLANEQNTSRGNISSGLKSGEGVALPEKVIKAYTTVGSILKTWTHGKLPKLFKVI 236
Query: 232 PSLNNWQDVLYVTNPEEWSPHAIYEGTKLFVSNLSSKEAQKFVIAVLLPRFREEIEFNED 291
PSL NWQDV+YVTNPEEWSPH +YE TKLFVSNL++KE+QKF+ +LL RFR+ IE +ED
Sbjct: 237 PSLRNWQDVIYVTNPEEWSPHVVYEATKLFVSNLTAKESQKFINLILLERFRDNIETSED 296
Query: 292 HNLNYHVYRALKKSLYKPAAFFKGFLFPLVESGCNVREATIAASVLSKVSVPXXXXXXXX 351
H+LNYH+YRA+KKSLYKP+AFFKGFLFPLVE+GCNVREATIA SVL+KVSVP
Sbjct: 297 HSLNYHIYRAVKKSLYKPSAFFKGFLFPLVETGCNVREATIAGSVLAKVSVPALHSSAAL 356
Query: 352 XXXXXXPFSPATTVFIKILLEKKYALPYQTVDECVFYFMRFREVTDGSTGQDAVRVLPVV 411
PFSP TTVFIKILL+KKYALPYQTVD+CV+YFMRFR + DGS G+DA RVLPV+
Sbjct: 357 SYLLRLPFSPPTTVFIKILLDKKYALPYQTVDDCVYYFMRFRILDDGSNGEDATRVLPVI 416
Query: 412 WHKAFLAFAQRYKNDITQDQRDFLLETVRQRGHKEIGPEIRRELLAGDSREFVSDVGNKA 471
WHKAFL FAQRYKNDITQDQRDFLLETVRQRGHK+IGPEIRRELLAG SREFV
Sbjct: 417 WHKAFLTFAQRYKNDITQDQRDFLLETVRQRGHKDIGPEIRRELLAGASREFVDPQEAND 476
Query: 472 DLMFDV 477
DLM DV
Sbjct: 477 DLMIDV 482
>SPBC13G1.09 [W] KOG3871 Cell adhesion complex protein bystin
Length = 449
Score = 282 bits (722), Expect = 7e-76
Identities = 146/305 (47%), Positives = 196/305 (63%), Gaps = 21/305 (6%)
Query: 157 NLADKIMASIREKEMELQYNEEEAGDASAVAEPAAPVDRTEGVALPPKVIQAYLAVGTIM 216
+L+D IM I E E A P+A + LPPKVI+ Y VG ++
Sbjct: 156 SLSDLIMQKINEAEAR----------ARGEYIPSAEEEENALPPLPPKVIEVYSKVGVLL 205
Query: 217 QTWRHGKLPKLFKVLPSLNNWQDVLYVTNPEEWSPHAIYEGTKLFVSNLSSKEAQKFVIA 276
+R GK+PK FK++P+L+NW+D+LY+T P+ W+PHA YE T++F+SNL +AQ F+
Sbjct: 206 SKYRSGKIPKAFKIIPTLSNWEDILYLTRPDMWTPHACYEATRIFISNLKPVQAQHFLTV 265
Query: 277 VLLPRFREEIEFNEDHNLNYHVYRALKKSLYKPAAFFKGFLFPLVESGCNVREATIAASV 336
++L R R++I E+ LNYH+Y ALKK+LYKP+++FKGFLFPLV+ C +REA I S+
Sbjct: 266 IILERVRDDIR--ENKKLNYHLYMALKKALYKPSSWFKGFLFPLVQENCTLREAAIIGSI 323
Query: 337 LSKVSVPXXXXXXXXXXXXXXPFSPATTVFIKILLEKKYALPYQTVDECVFYFMRFREVT 396
L KVSVP S AT+VFI+ILL+KKYALPY+ +D VFYFMR++ +
Sbjct: 324 LQKVSVPVLHSAAALLRLTEFDLSGATSVFIRILLDKKYALPYKVLDSLVFYFMRWKSLE 383
Query: 397 DGSTGQDAVRVLPVVWHKAFLAFAQRYKNDITQDQRDFLLETVRQRGHKEIGPEIRRELL 456
R L V+ H++ L FAQRYK DIT +Q+D LLE VR +GH IGPEIRRELL
Sbjct: 384 ---------RPLAVLEHQSMLVFAQRYKFDITPEQKDALLEVVRLKGHYSIGPEIRRELL 434
Query: 457 AGDSR 461
SR
Sbjct: 435 NSASR 439
>Hs15208645 [W] KOG3871 Cell adhesion complex protein bystin
Length = 301
Score = 244 bits (624), Expect = 2e-64
Identities = 130/311 (41%), Positives = 188/311 (59%), Gaps = 26/311 (8%)
Query: 158 LADKIMASIREKEMELQYNEEEAGDASAVAEPAAPVDRTEGVALPPKVIQAYLAVGTIMQ 217
LAD IM + EK+ E+ E + S P L P+V++ Y V ++
Sbjct: 11 LADIIMEKLTEKQTEV---ETVMSEVSGFPMPQ----------LDPRVLEVYRGVREVLS 57
Query: 218 TWRHGKLPKLFKVLPSLNNWQDVLYVTNPEEWSPHAIYEGTKLFVSNLSSKEAQKFVIAV 277
+R GKLPK FK++P+L+NW+ +LYVT PE W+ A+Y+ T++F SNL + AQ+F V
Sbjct: 58 KYRSGKLPKAFKIIPALSNWEQILYVTEPEAWTAAAMYQATRIFASNLKERMAQRFYNLV 117
Query: 278 LLPRFREEIEFNEDHNLNYHVYRALKKSLYKPAAFFKGFLFPLVESG-CNVREATIAASV 336
LLPR R+++ E LN+H+Y ALKK+L+KP A+FKG L PL ESG C +REA I S+
Sbjct: 118 LLPRVRDDVA--EYKRLNFHLYMALKKALFKPGAWFKGILIPLCESGTCTLREAIIVGSI 175
Query: 337 LSKVSVPXXXXXXXXXXXXXXPFSPATTVFIKILLEKKYALPYQTVDECVFYFMRFREVT 396
++K S+P +S A ++F+++LL+KKYALPY+ +D VF+F+ FR
Sbjct: 176 ITKCSIPVLHSSAAMLKIAEMEYSGANSIFLRLLLDKKYALPYRVLDALVFHFLGFR--- 232
Query: 397 DGSTGQDAVRVLPVVWHKAFLAFAQRYKNDITQDQRDFLLETVRQRGHKEIGPEIRRELL 456
R LPV+WH+ L QRYK D+ DQ++ LLE +R + H ++ PEIRREL
Sbjct: 233 ------TEKRELPVLWHQCLLTLVQRYKADLATDQKEALLELLRLQPHPQLSPEIRRELQ 286
Query: 457 AGDSREFVSDV 467
+ R+ V DV
Sbjct: 287 SAVPRD-VEDV 296
>7290847 [W] KOG3871 Cell adhesion complex protein bystin
Length = 436
Score = 236 bits (603), Expect = 4e-62
Identities = 122/307 (39%), Positives = 186/307 (59%), Gaps = 25/307 (8%)
Query: 157 NLADKIMASIREKEMELQYNEEEAGDASAVAEPAAPVDRTEGVALPPKVIQAYLAVGTIM 216
+L+ IM I+EKE ++ + G + PKV + Y V ++
Sbjct: 127 HLSKMIMQKIQEKEADIHTKISDEGSLKIEE-------------IDPKVKEMYEGVRDVL 173
Query: 217 QTWRHGKLPKLFKVLPSLNNWQDVLYVTNPEEWSPHAIYEGTKLFVSNLSSKEAQKFVIA 276
+ +R GK+PK FK++P L NW+ +L++T P WS A+++GT++F S LS AQ+F
Sbjct: 174 KRYRSGKIPKAFKIIPKLRNWEQILFITEPHNWSAAAMFQGTRIFCSVLSQAMAQRFYNL 233
Query: 277 VLLPRFREEIEFNEDHNLNYHVYRALKKSLYKPAAFFKGFLFPLVESG-CNVREATIAAS 335
VLLPR R+++ E LN H+Y ALK++L+KPAAF KG + PL+E G C +REA I S
Sbjct: 234 VLLPRVRDDL--CEYKKLNMHLYNALKRALFKPAAFMKGIILPLLEGGDCTLREAIIFGS 291
Query: 336 VLSKVSVPXXXXXXXXXXXXXXPFSPATTVFIKILLEKKYALPYQTVDECVFYFMRFREV 395
V+++ S+P +S A ++FI+ L+K+YALPY+ VD VF+F+RF
Sbjct: 292 VVARSSIPVLHSSACLLKICEMAYSGANSIFIRYFLDKRYALPYRVVDAAVFHFLRF--- 348
Query: 396 TDGSTGQDAVRVLPVVWHKAFLAFAQRYKNDITQDQRDFLLETVRQRGHKEIGPEIRREL 455
++ R LPV+WH++ L FAQRYKNDI+ +QRD LL+ ++++ H +I P++RREL
Sbjct: 349 ------ENDKRELPVLWHQSLLTFAQRYKNDISSEQRDALLQLLKKKSHFKITPDVRREL 402
Query: 456 LAGDSRE 462
A R+
Sbjct: 403 QAASCRD 409
>CE25013 [W] KOG3871 Cell adhesion complex protein bystin
Length = 449
Score = 233 bits (595), Expect = 4e-61
Identities = 115/263 (43%), Positives = 172/263 (64%), Gaps = 12/263 (4%)
Query: 201 LPPKVIQAYLAVGTIMQTWRHGKLPKLFKVLPSLNNWQDVLYVTNPEEWSPHAIYEGTKL 260
+ P+V++ Y +G M +R GK+PK FK++P + NW+ +L++T PE W+ A+Y+ T+L
Sbjct: 179 MDPEVVEMYEQIGQYMSKYRSGKVPKAFKIIPKMINWEQILFLTKPETWTAAAMYQATRL 238
Query: 261 FVSNLSSKEAQKFVIAVLLPRFREEIEFNEDHNLNYHVYRALKKSLYKPAAFFKGFLFPL 320
F SN++ K Q+F VLLPR R++I+ E LNYH+Y+AL K++YKPAAFFKG + PL
Sbjct: 239 FASNMNPKMCQRFYTLVLLPRLRDDID--EFKKLNYHLYQALCKAIYKPAAFFKGLILPL 296
Query: 321 VESG-CNVREATIAASVLSKVSVPXXXXXXXXXXXXXXPFSPATTVFIKILLEKKYALPY 379
+ESG C +REA I +SVL+KV +P ++ A +VF++ L++KKYALPY
Sbjct: 297 LESGTCTLREAVIFSSVLTKVPIPIFHSAAAMLRIAEMEYTGANSVFLRALIDKKYALPY 356
Query: 380 QTVDECVFYFMRFREVTDGSTGQDAVRVLPVVWHKAFLAFAQRYKNDITQDQRDFLLETV 439
+ VD V +F+R + TD R +PV+WH+ LA QRYKND+ +Q+ + E +
Sbjct: 357 RAVDGVVNHFIRLK--TD-------ERDMPVLWHQCLLALCQRYKNDLNAEQKAAIYELI 407
Query: 440 RQRGHKEIGPEIRRELLAGDSRE 462
R GH I PEIRREL + ++ +
Sbjct: 408 RFHGHYLISPEIRRELESKETED 430
>At1g31660 [W] KOG3871 Cell adhesion complex protein bystin
Length = 442
Score = 229 bits (583), Expect = 9e-60
Identities = 128/318 (40%), Positives = 188/318 (58%), Gaps = 36/318 (11%)
Query: 158 LADKIMASIREKEMELQYNEEEAGDASAVAEPAAPVDRTEGVALPPKVIQAYLAVGTIMQ 217
L D I+ +++K+ +L EEE D + P + + Y VG M
Sbjct: 138 LTDIIIKKLKDKDADLA--EEERPDPK----------------MDPAITKLYKGVGKFMS 179
Query: 218 TWRHGKLPKLFKVLPSLNNWQDVLYVTNPEEWSPHAIYEGTKLFVSNLSSKEAQKFVIAV 277
+ GKLPK FK++ S+ +W+DVLY+T PE+WSP+A+Y+ T++F SNL ++ Q+F V
Sbjct: 180 EYTVGKLPKAFKLVTSMEHWEDVLYLTEPEKWSPNALYQATRIFASNLKDRQVQRFYNYV 239
Query: 278 LLPRFREEIEFNEDHNLNYHVYRALKKSLYKPAAFFKGFLFPLVESG-CNVREATIAASV 336
LLPR RE+I + L++ +Y+ALKKSLYKP+AF +G LFPL +SG CN+REA I S+
Sbjct: 240 LLPRVREDI--RKHKKLHFALYQALKKSLYKPSAFNQGILFPLCKSGTCNLREAVIIGSI 297
Query: 337 LSKVSVPXXXXXXXXXXXXXXPFSPATTVFIKILLEKKYALPYQTVDECVFYFMRFREVT 396
L K S+P + T+ FIK+LLEKKY +PY+ +D V +FMRF
Sbjct: 298 LEKCSIPMLHSCVALNRLAEMDYCGTTSYFIKVLLEKKYCMPYRVLDALVAHFMRF---- 353
Query: 397 DGSTGQDAVRVLPVVWHKAFLAFAQRYKNDITQDQRDFLLETVRQRGHKEIGPEIRRELL 456
D +RV+PV+WH++ L F QRYK +I ++ ++ L ++++ H + PEI REL
Sbjct: 354 -----VDDIRVMPVIWHQSLLTFVQRYKYEILKEDKEHLQTLLQRQKHHLVTPEILREL- 407
Query: 457 AGDSREFVSDVGNKADLM 474
DSR + G K D M
Sbjct: 408 -KDSR----NRGEKEDPM 420
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.136 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,921,795
Number of Sequences: 60738
Number of extensions: 916282
Number of successful extensions: 2570
Number of sequences better than 1.0e-05: 6
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2546
Number of HSP's gapped (non-prelim): 8
length of query: 478
length of database: 30,389,216
effective HSP length: 110
effective length of query: 368
effective length of database: 23,708,036
effective search space: 8724557248
effective search space used: 8724557248
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)