ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI1799 good R KOG1424 General function prediction only Predicted GTP-binding protein MMR1
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI1799 643877 641934 -648
(648 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YGL099w [R] KOG1424 Predicted GTP-binding protein MMR1 924 0.0
SPAC3F10.16c [R] KOG1424 Predicted GTP-binding protein MMR1 444 e-124
7290165 [R] KOG1424 Predicted GTP-binding protein MMR1 370 e-102
At2g27200 [R] KOG1424 Predicted GTP-binding protein MMR1 335 1e-91
CE26362 [R] KOG1424 Predicted GTP-binding protein MMR1 316 8e-86
At1g08410 [R] KOG1424 Predicted GTP-binding protein MMR1 276 7e-74
Hs14149720 [R] KOG1424 Predicted GTP-binding protein MMR1 201 4e-51
7298708 [R] KOG1424 Predicted GTP-binding protein MMR1 142 2e-33
At3g07050 [R] KOG2484 GTPase 125 2e-28
7300220 [R] KOG2484 GTPase 113 1e-24
Hs20555662 [R] KOG1424 Predicted GTP-binding protein MMR1 112 2e-24
Hs4885289 [R] KOG1424 Predicted GTP-binding protein MMR1 110 5e-24
At1g52980 [R] KOG2423 Nucleolar GTPase 110 5e-24
7302756 [R] KOG2423 Nucleolar GTPase 102 2e-21
CE02270 [R] KOG2484 GTPase 99 2e-20
ECU08g0240 [R] KOG1424 Predicted GTP-binding protein MMR1 98 3e-20
ECU09g1650 [R] KOG2423 Nucleolar GTPase 86 2e-16
YNR053c [R] KOG2423 Nucleolar GTPase 83 1e-15
SPAC6F6.03c [R] KOG2423 Nucleolar GTPase 82 3e-15
CE20084 [R] KOG2423 Nucleolar GTPase 80 7e-15
CE20083 [R] KOG2423 Nucleolar GTPase 80 7e-15
SPBC26H8.08c [R] KOG2484 GTPase 80 1e-14
Hs7019419 [R] KOG2423 Nucleolar GTPase 79 2e-14
Hs9506611 [R] KOG2484 GTPase 78 4e-14
YER006w [R] KOG2484 GTPase 62 4e-09
At4g02790 [R] KOG2484 GTPase 54 6e-07
Hs7657048 [R] KOG2484 GTPase 52 3e-06
>YGL099w [R] KOG1424 Predicted GTP-binding protein MMR1
Length = 640
Score = 924 bits (2388), Expect = 0.0
Identities = 451/601 (75%), Positives = 519/601 (86%), Gaps = 10/601 (1%)
Query: 21 RKNKNTIGLGKAIQTARRKENEVQYLPDGEERFTTDKHEANWVKLRSVTQESALDEFLST 80
RKNKN + LG+AI+ AR+KEN ++YLPDGE RFTTDKHEANWVKLRSVTQESALDEFLST
Sbjct: 21 RKNKNKLELGRAIKYARQKENAIEYLPDGEMRFTTDKHEANWVKLRSVTQESALDEFLST 80
Query: 81 AELADKDFTADRHSNVKIIRMDNGADAATSQGFSLTNEQKSKINEKQRLHARELIVPRRP 140
A LADKDFTADRHSNVKIIRMD+G D+ATSQGFS+TNEQ+ +N KQR A++LIVPRRP
Sbjct: 81 AALADKDFTADRHSNVKIIRMDSGNDSATSQGFSMTNEQRGNLNAKQRALAKDLIVPRRP 140
Query: 141 KWNESMTRFELERLEKEAFLEWRRKLAYLQEDNEDLLLTPFERNIEVWRQLWRVVERCDL 200
+WNE M++F+L+R EKEAFLEWRRKLA+LQE NEDLLLTPFERNIEVW+QLWRVVER DL
Sbjct: 141 EWNEGMSKFQLDRQEKEAFLEWRRKLAHLQESNEDLLLTPFERNIEVWKQLWRVVERSDL 200
Query: 201 VVQIVDARDPLLFRSTDLEKYVKEVDDRKQNLLLINKADLLTRKQRIIWAKYLLSRGISF 260
VVQIVDAR+PLLFRS DLE+YVKE DDRK NLLL+NKADLLT+KQRI WAKY +S+ ISF
Sbjct: 201 VVQIVDARNPLLFRSVDLERYVKESDDRKANLLLVNKADLLTKKQRIAWAKYFISKNISF 260
Query: 261 TFFSAAKANEILERQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNKEILDKINILKID 320
TF+SA +AN++LE+Q ++++++K+ IL ID
Sbjct: 261 TFYSALRANQLLEKQKEMGEDYREQDFEEADKEGFDA---------DEKVMEKVKILSID 311
Query: 321 QLEELFLDKAPNDPLLPPLPGQEPIIQIGLVGYPNVGKSSTINALVGAKKVSVSSTPGKT 380
QLEELFL KAPN+PLLPPLPGQ P+I IGLVGYPNVGKSSTIN+LVGAKKVSVSSTPGKT
Sbjct: 312 QLEELFLSKAPNEPLLPPLPGQPPLINIGLVGYPNVGKSSTINSLVGAKKVSVSSTPGKT 371
Query: 381 KHFQTIKLSDKVTLCDCPGLVFPNFAYNKGELVCNGVLPIDQLRDYIGPSTLVAERVPKY 440
KHFQTIKLSD V LCDCPGLVFPNFAYNKGELVCNGVLPIDQLRDYIGP+ LVAER+PKY
Sbjct: 372 KHFQTIKLSDSVMLCDCPGLVFPNFAYNKGELVCNGVLPIDQLRDYIGPAGLVAERIPKY 431
Query: 441 FLEAIYGIHIQTKSVEEGGNGEVPTAQELLVAYARARGYMTQGFGAADESRASRYILKDY 500
++EAIYGIHIQTKS +EGGNG++PTAQELLVAYARARGYMTQG+G+ADE RASRYILKDY
Sbjct: 432 YIEAIYGIHIQTKSRDEGGNGDIPTAQELLVAYARARGYMTQGYGSADEPRASRYILKDY 491
Query: 501 VNGKLLYINPPPHMDDDTPYTREECKEFNKDLYTFSKLPINRQEQLAEAAKHKGIQDLDL 560
VNGKLLY+NPPPH++DDTPYTREEC+EFNKDLY F +LP R+EQ+ AAK KGI +DL
Sbjct: 492 VNGKLLYVNPPPHLEDDTPYTREECEEFNKDLYVFDRLPDTRKEQVQNAAKAKGIDIVDL 551
Query: 561 ARDLSRLTFSAHIGGDGDKVQAKSVNHGGKQAALYNVADELDKNFFHLNGVQGRLTNPFH 620
ARDL++LTFSAH GGD K +AKSV HGGKQAALYN A++LD++FF +N V+GRL+ PFH
Sbjct: 552 ARDLNQLTFSAHTGGDTQK-EAKSVTHGGKQAALYNAAEDLDRDFFKMNNVEGRLSTPFH 610
Query: 621 K 621
K
Sbjct: 611 K 611
>SPAC3F10.16c [R] KOG1424 Predicted GTP-binding protein MMR1
Length = 616
Score = 444 bits (1142), Expect = e-124
Identities = 255/547 (46%), Positives = 341/547 (61%), Gaps = 47/547 (8%)
Query: 22 KNKNTIGLGKAIQT-----ARRKENEVQYLPDGEERFTTDKHEANWVKLRSVTQESALDE 76
K+KN IGLG+AIQ+ R ++ ++++ D + + A+ LRSVT E+ LDE
Sbjct: 5 KSKNQIGLGRAIQSDFTKNRRNRKGGLKHIVDSDPK-------AHRAALRSVTHETDLDE 57
Query: 77 FLSTAELADKDFTADRHSNVKIIRMDNGADAATSQGFSLTNEQKSKINEKQRLHARELIV 136
FL+TAEL + +F A++ NV +I+ F L+ E+ ++ +KQ + L +
Sbjct: 58 FLNTAELGEVEFIAEKQ-NVTVIQNPE------QNPFLLSKEEAARSKQKQEKNKDRLTI 110
Query: 137 PRRPKWNESMTRFELERLEKEAFLEWRRKLAYLQEDNEDLLLTPFERNIEVWRQLWRVVE 196
PRRP W+++ T EL+R+E+E+FL WRR LA LQ D E ++TPFERN+E+WRQLWRV+E
Sbjct: 111 PRRPHWDQTTTAVELDRMERESFLNWRRNLAQLQ-DVEGFIVTPFERNLEIWRQLWRVIE 169
Query: 197 RCDLVVQIVDARDPLLFRSTDLEKYVKEVDDRKQNLLLINKADLLTRKQRIIWAKYLLSR 256
R D+VVQIVDAR+PL FRS LE+YVKEV K+N LL+NKAD+LT +QR W+ Y
Sbjct: 170 RSDVVVQIVDARNPLFFRSAHLEQYVKEVGPSKKNFLLVNKADMLTEEQRNYWSSYFNEN 229
Query: 257 GISFTFFSAAKANEILERQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNKEILDKINI 316
I F FFSA A E ER N +I
Sbjct: 230 NIPFLFFSARMAAEANERGEDLETYESTSSNEIPESLQADE---------NDVHSSRIAT 280
Query: 317 LKIDQLEELFLDKAPNDPLLPPLPGQEPIIQIGLVGYPNVGKSSTINALVGAKKVSVSST 376
LK+ LE +F + LP + + GLVGYPNVGKSSTINALVG+KKVSVSST
Sbjct: 281 LKV--LEGIF------EKFASTLPDGKTKMTFGLVGYPNVGKSSTINALVGSKKVSVSST 332
Query: 377 PGKTKHFQTIKLSDKVTLCDCPGLVFPNFAYNKGELVCNGVLPIDQLRDYIGPSTLVAER 436
PGKTKHFQTI LS+KV+L DCPGLVFP+FA + +LV +GVLPIDQLR+Y GPS L+AER
Sbjct: 333 PGKTKHFQTINLSEKVSLLDCPGLVFPSFATTQADLVLDGVLPIDQLREYTGPSALMAER 392
Query: 437 VPKYFLEAIYGIHIQTKSVEEGGNGEVPTAQELLVAYARARGYMTQGFGAADESRASRYI 496
+PK LE +Y I I+ K +EEGG G VP+AQE+L +AR+RG+M G D+SRA+R +
Sbjct: 393 IPKEVLETLYTIRIRIKPIEEGGTG-VPSAQEVLFPFARSRGFMRAHHGTPDDSRAARIL 451
Query: 497 LKDYVNGKLLYINPPPHMDDDTPYTREECKEFNKDLYTFSKLPINRQEQLAEAAKHKGIQ 556
LKDYVNGKLLY++PPP+ + EFNK+ + K+ + + E + I
Sbjct: 452 LKDYVNGKLLYVHPPPNYPNSG-------SEFNKEHH--QKIVSATSDSITEKLQRTAIS 502
Query: 557 DLDLARD 563
D L+ +
Sbjct: 503 DNTLSAE 509
>7290165 [R] KOG1424 Predicted GTP-binding protein MMR1
Length = 606
Score = 370 bits (951), Expect = e-102
Identities = 237/603 (39%), Positives = 330/603 (54%), Gaps = 50/603 (8%)
Query: 35 TARRKENEVQYLPDGEERFTTDKHEANWVKLRSVTQESALDEFLSTAELADKDFTADRHS 94
T RRK + L E + D ++ + L SVT+ES+ FL TAELA +F A++
Sbjct: 24 TQRRKVDNDTMLHTTELQ---DGYDWGRLNLSSVTEESSFQAFLRTAELAGTEFQAEK-L 79
Query: 95 NVKIIRMDNGADAATSQGFSLTNEQKSKINEKQRLHARELIVPRRPKWNESMTRFELERL 154
N+ + L+ Q+ ++++K H +L +PRRPKW + + EL R
Sbjct: 80 NITFVNPKQRVGL-------LSKTQEQRMHQKHDEHRDQLKIPRRPKWTKETSAEELVRA 132
Query: 155 EKEAFLEWRRKLAYLQEDNEDLLLTPFERNIEVWRQLWRVVERCDLVVQIVDARDPLLFR 214
E EAFL+WRR LA LQED E++L+TP+E+N+E WRQLWRVVER D+VVQIVDAR+PLLFR
Sbjct: 133 ENEAFLDWRRDLALLQED-EEILMTPYEKNLEFWRQLWRVVERSDVVVQIVDARNPLLFR 191
Query: 215 STDLEKYVKEVDDRKQNLLLINKADLLTRKQRIIWAKYLLSRGISFTFFSAAKANEILER 274
S DLE+YVKEV+ K N++L+NK+DLLT +QR WA+Y S GI F+SA E L+R
Sbjct: 192 SADLERYVKEVEPSKMNMILVNKSDLLTEEQRRHWAEYFDSEGIRTAFYSATLVEEELKR 251
Query: 275 QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNKEILDKINILKIDQLEELFLDKAPNDP 334
+ I K + Q +E L + P D
Sbjct: 252 EAEECLDSFPEVQQLRRAVEEIKQSLDSVEDALNVIEQKYKTIPETQNDE--LPRLPGDK 309
Query: 335 LLPPLPGQEPIIQ-----------------IGLVGYPNVGKSSTINALVGAKKVSVSSTP 377
P L + +I+ +G+VGYPNVGKSSTIN+L+ KKVSVS+TP
Sbjct: 310 NSPRLLSRLELIEFLRNIYTGPRHTEQHVTVGMVGYPNVGKSSTINSLMTVKKVSVSATP 369
Query: 378 GKTKHFQTIKLSDKVTLCDCPGLVFPNFAYNKGELVCNGVLPIDQLRDYIGPSTLVAERV 437
GKTK FQT+ L + LCDCPGLV P+F K +++ NG+LPIDQ+RD++ L+ ER+
Sbjct: 370 GKTKRFQTLFLDKDILLCDCPGLVMPSFVLTKADMLLNGILPIDQMRDHVPAVNLLCERI 429
Query: 438 PKYFLEAIYGIHIQTKSVEEGGNGEVPTAQELLVAYARARGYMTQGFGAADESRASRYIL 497
P++ LE YGI I K +E P ++ELL+AY RG+MT G D++R++RY+L
Sbjct: 430 PRHVLEDKYGIVI-AKPLEGEDMERPPHSEELLLAYGYNRGFMTSN-GQPDQARSARYVL 487
Query: 498 KDYVNGKLLYINPPPHMDDDTPYTREECKEFNKDLYTFSKLPINRQEQLAEAAKHKGIQD 557
KDYVNG+LLY PP + +T E + + S+LP Q+Q A ++
Sbjct: 488 KDYVNGRLLYAMSPPSVPQTEYHT---FPERQRRVIEESQLP--GQQQRAMRINKSTSKE 542
Query: 558 LDLARDLSRLTFSAHIGGDGDKVQAKSVNHGGKQAALYNVA-----------DELDKNFF 606
LD + S AH+ G + + N G A A ++L K F
Sbjct: 543 LD-NQFFSDKPTHAHVKGRTNFPNVRLANDGSLVAGNDPAAKPWRHVKKERREKLRKKFS 601
Query: 607 HLN 609
HL+
Sbjct: 602 HLD 604
>At2g27200 [R] KOG1424 Predicted GTP-binding protein MMR1
Length = 537
Score = 335 bits (860), Expect = 1e-91
Identities = 220/566 (38%), Positives = 317/566 (55%), Gaps = 38/566 (6%)
Query: 22 KNKNTIGLGKAIQTARRKENEVQYLPDGEERFTTDKHEANWVKLRSVTQESALDEFLSTA 81
KN+ T LG+A+ + + +Q + + + D+H+ L SVT+ S +D + A
Sbjct: 3 KNEKT-SLGRAL--VKHHNHMIQETKEKGKSYK-DQHKK---VLESVTEVSDIDAIIEQA 55
Query: 82 ELADKDFTADRHSNVKI-IRMDNGADAATSQGFSLTNEQKSKINEKQRLHARELIVPRRP 140
E A++ F S + I MD G+ +S G + ++ ++ E + LHA L VPRRP
Sbjct: 56 EEAERLFAIHHDSATPVPINMDTGS---SSSGITAKEWKEQRMRE-EALHASSLQVPRRP 111
Query: 141 KWNESMTRFELERLEKEAFLEWRRKLAYLQEDNEDLLLTPFERNIEVWRQLWRVVERCDL 200
W M +L+ EK+AFL WRRKLA L+E NE L+LTPFE+N+++WRQLWRV+ER DL
Sbjct: 112 HWTPKMNVEKLDANEKQAFLTWRRKLASLEE-NEKLVLTPFEKNLDIWRQLWRVLERSDL 170
Query: 201 VVQIVDARDPLLFRSTDLEKYVKEVDDRKQNLLLINKADLLTRKQRIIWAKYLLSRGISF 260
+V +VDARDPL +R DLE Y +E+D+ K+ +LL+NKADLL R WA+Y I F
Sbjct: 171 IVMVVDARDPLFYRCPDLEAYAQEIDEHKKTMLLVNKADLLPSYVREKWAEYFSRNNILF 230
Query: 261 TFFSAAKANEILERQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNKEILDKINILKID 320
F+SA A LE + ++LD+ LK++
Sbjct: 231 VFWSAKAATATLEGKPLKEQWRAPDTTQKTDNPAVKVYG-------RDDLLDR---LKLE 280
Query: 321 QLEELFLDKAPNDPLLPPLPGQEPIIQIGLVGYPNVGKSSTINALVGAKKVSVSSTPGKT 380
LE + + K+ E ++ +G VGYPNVGKSSTINALVG K+ V+STPGKT
Sbjct: 281 ALEIVKMRKSRGVSATSTESHCEQVV-VGFVGYPNVGKSSTINALVGQKRTGVTSTPGKT 339
Query: 381 KHFQTIKLSDKVTLCDCPGLVFPNFAYNKGELVCNGVLPIDQLRDYIGPSTLVAERVPKY 440
KHFQT+ +S+ + LCDCPGLVFP+F+ ++ E+V +GVLPID++ +++ +VAE VP++
Sbjct: 340 KHFQTLIISEDLMLCDCPGLVFPSFSSSRYEMVASGVLPIDRMTEHLEAIKVVAELVPRH 399
Query: 441 FLEAIYGIHI-QTKSVEEGGNGEVPTAQELLVAYARARGYMTQGFGAADESRASRYILKD 499
+E +Y I + + KS E P A ELL Y +RGY+ G DE+RA+R ILKD
Sbjct: 400 AIEDVYNISLPKPKSYEP--QSRPPLASELLRTYCLSRGYVASS-GLPDETRAARQILKD 456
Query: 500 YVNGKLLYINPPPHMDDDTPYTREECKEFNKDLYTFSKLPINRQEQLAEAAKHKGI-QDL 558
Y+ GKL + PP + TR++ E D ++ E+ E A G+ Q L
Sbjct: 457 YIEGKLPHFAMPPEI------TRDDENETADDTLGAETREGSQTEKKGEEAPSLGLDQVL 510
Query: 559 DLARDLSRLTFSAHIGGDGDKVQAKS 584
D DLS + + K KS
Sbjct: 511 D---DLSSFDLANGLVSSKTKQHKKS 533
>CE26362 [R] KOG1424 Predicted GTP-binding protein MMR1
Length = 506
Score = 316 bits (809), Expect = 8e-86
Identities = 193/461 (41%), Positives = 269/461 (57%), Gaps = 49/461 (10%)
Query: 57 KHEANWVKLRSVTQESALDEFLSTAELADKDFTADRHSNVKIIRMDNGADAATSQGFSLT 116
+HE N + SVT E++L+EFL+ AELA +FTA++ KII ++ T +
Sbjct: 2 EHEVNHY-IDSVTDETSLEEFLAKAELAGTEFTAEKEQ-FKIIEKNSAIVVPTRLDYR-A 58
Query: 117 NEQKSKINEKQRLHARELIVPRRPKWNESMTRFELERLEKEAFLEWRRKLAYLQEDNEDL 176
N K NE + L +PRRP +L +LE EAFL+WR L+ LQE + L
Sbjct: 59 NLDLQKENEHR------LRIPRRPAKELWENMEDLTKLENEAFLQWRSDLSELQEV-DGL 111
Query: 177 LLTPFERNIEVWRQLWRVVERCDLVVQIVDARDPLLFRSTDLEKYVKEVDDRKQNLLLIN 236
+LTPFERN ++WR+LWRVVE+ D++VQIVDAR+PLLFRS DL+ YVKEVD KQ LLL+N
Sbjct: 112 VLTPFERNPDMWRELWRVVEKSDIIVQIVDARNPLLFRSKDLDDYVKEVDPAKQILLLVN 171
Query: 237 KADLLTRKQRIIWAKYLLSRGISFTFFSAAKANEILERQXXXXXXXXXXXXXXXXXXXXX 296
KADLL +Q+ W +Y I F+SA +E+L+
Sbjct: 172 KADLLKPEQQASWREYFEKENIKVIFWSAI--DEVLDP------------IDEDAVETSN 217
Query: 297 XXXXXXXXXVNKEILDKINILKIDQLEELFLDKAPNDPLLPPLPGQEPIIQIGLVGYPNV 356
NK+ L I K +L + ++P P + +G+VGYPNV
Sbjct: 218 PSTSTHMFVTNKDEL----IAKFKELGHV-----SDEPSAKP-------VMVGMVGYPNV 261
Query: 357 GKSSTINALVGAKKVSVSSTPGKTKHFQTIKLSDKVTLCDCPGLVFPNFAYNKGELVCNG 416
GKSSTIN L G KKVSVS+TPGKT+HFQTI + ++ LCDCPGLV P+F++ + E+ NG
Sbjct: 262 GKSSTINKLAGGKKVSVSATPGKTRHFQTIHIDSQLCLCDCPGLVMPSFSFGRSEMFLNG 321
Query: 417 VLPIDQLRDYIGPSTLVAERVPKYFLEAIYGIHIQTKSVEEGGNGEVPTAQELLVAYARA 476
+LP+DQ+RD+ GP++L+ RVP + +EA Y I + + P+A LL + A
Sbjct: 322 ILPVDQMRDHFGPTSLLLSRVPVHVIEATYSIMLPEM--------QSPSAINLLNSLAFM 373
Query: 477 RGYMTQGFGAADESRASRYILKDYVNGKLLYINPPPHMDDD 517
RG+M G D SRA+R + KD V+GKL++ PP ++ +
Sbjct: 374 RGFMASS-GIPDCSRAARLMFKDVVSGKLIWAAAPPGVEQE 413
>At1g08410 [R] KOG1424 Predicted GTP-binding protein MMR1
Length = 589
Score = 276 bits (706), Expect = 7e-74
Identities = 187/537 (34%), Positives = 275/537 (50%), Gaps = 37/537 (6%)
Query: 65 LRSVTQESALDEFLSTAELADKDFTADRHSNVKI-IRMDNGADAATSQGFSLTNEQKSKI 123
L SVT+ S +D + AE A++ +T + S+ + I +D + ++ +QK +
Sbjct: 39 LESVTEVSDIDAIIEQAEEAERLYTINHSSSTPLSINLDTNSSSSVIAAEEWREQQKIE- 97
Query: 124 NEKQRLHARELIVPRRPKWNESMTRFELERLEKEAFLEWRRKLAYLQEDNEDLLLTPFER 183
+ LHA L VPRRP W M+ EL+ EK+AFL WRR L L+E NE L+LTPFE+
Sbjct: 98 ---EALHASSLQVPRRPPWTPEMSVEELDANEKQAFLNWRRMLVSLEE-NEKLVLTPFEK 153
Query: 184 NIEVWRQLWRVVERCDLVVQIVDARDPLLFRSTDLEKYVKEVDDRKQNLLLINKADLLTR 243
N+++WRQLWRV+ER DL+V +VDARDPL +R DLE Y +E+D+ K+ +LL+NKADLL
Sbjct: 154 NLDIWRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAQEIDEHKKIMLLVNKADLLPT 213
Query: 244 KQRIIWAKYLLSRGISFTFFSAAKANEILE----RQXXXXXXXXXXXXXXXXXXXXXXXX 299
R WA+Y I F F+SA A LE ++
Sbjct: 214 DVREKWAEYFRLNNILFVFWSAIAATATLEGKVLKEQWRQPDNLQKTDDPDIMIYGRDEL 273
Query: 300 XXXXXXVNKEILDKINILKIDQLEELFLDKAPNDPLLP-----PLPGQEPIIQIGLVGYP 354
+EI+ N + + + D + P G+ I LVG
Sbjct: 274 LSRLQFEAQEIVKVRNSRAASVSSQSWTGEYQRDQAVVGFVGYPNVGKSSTIN-ALVGQK 332
Query: 355 NVGKSSTINALVGAKKVSVSSTPGKTKHFQTIKLSDKVTLCDCPGLVFPNFAYNKGELVC 414
G +ST PGKTKHFQT+ +SD++ LCDCPGLVFP+F+ ++ E++
Sbjct: 333 RTGVTST---------------PGKTKHFQTLIISDELMLCDCPGLVFPSFSSSRYEMIA 377
Query: 415 NGVLPIDQLRDYIGPSTLVAERVPKYFLEAIYGIHIQTKSVEEGGNGEVPTAQELLVAYA 474
+GVLPID++ ++ +VA++VP+ +E++Y I + E P A ELL +Y
Sbjct: 378 SGVLPIDRMTEHREAIQVVADKVPRRVIESVYNISLPKPKTYE-RQSRPPHAAELLKSYC 436
Query: 475 RARGYMTQGFGAADESRASRYILKDYVNGKLLYINPPPHMDDDTPYTREECKEFNKDLYT 534
+RGY+ G DE++A+R ILKDY+ GKL + PP M E+ +E +D+
Sbjct: 437 ASRGYVASS-GLPDETKAARLILKDYIGGKLPHYAMPPGMPQADEPDIEDTQEL-EDILE 494
Query: 535 FSKLPINRQEQLAEAAKHKGIQDLDLARDLSRLTFSAHIGGDGDKVQAKSVNHGGKQ 591
S+ + E + GI D+ DLS + + KV AK KQ
Sbjct: 495 GSESDDSAVGDETENEQVPGID--DVLDDLSSFDLANGL-KSSKKVTAKKQTASHKQ 548
>Hs14149720 [R] KOG1424 Predicted GTP-binding protein MMR1
Length = 658
Score = 201 bits (510), Expect = 4e-51
Identities = 97/173 (56%), Positives = 128/173 (73%), Gaps = 2/173 (1%)
Query: 346 IQIGLVGYPNVGKSSTINALVGAKKVSVSSTPGKTKHFQTIKLSDKVTLCDCPGLVFPNF 405
+ +GLVGYPNVGKSSTIN ++G KKVSVS+TPG TKHFQT+ + + LCDCPGLV P+F
Sbjct: 387 LTVGLVGYPNVGKSSTINTIMGNKKVSVSATPGHTKHFQTLYVEPGLCLCDCPGLVMPSF 446
Query: 406 AYNKGELVCNGVLPIDQLRDYIGPSTLVAERVPKYFLEAIYGIHIQTKSVEEGGNGEVPT 465
K E+ C+G+LPIDQ+RD++ P +LV + +P++ LEA YGI+I T +E + PT
Sbjct: 447 VSTKAEMTCSGILPIDQMRDHVPPVSLVCQNIPRHVLEATYGINIITPREDEDPH-RPPT 505
Query: 466 AQELLVAYARARGYMTQGFGAADESRASRYILKDYVNGKLLYINPPPHMDDDT 518
++ELL AY RG+MT G D+ R++RYILKDYV+GKLLY +PPP D T
Sbjct: 506 SEELLTAYGYMRGFMT-AHGQPDQPRSARYILKDYVSGKLLYCHPPPGRDPVT 557
Score = 197 bits (501), Expect = 4e-50
Identities = 104/210 (49%), Positives = 148/210 (69%), Gaps = 9/210 (4%)
Query: 56 DKHEANWVKLRSVTQESALDEFLSTAELADKDFTADRHSNVKIIRMDNGADAATSQGFSL 115
D ++ + L+SVT++S+LD+FL+TAELA +F A++ N+K + A+A T L
Sbjct: 41 DGYDWGRLNLQSVTEQSSLDDFLATAELAGTEFVAEK-LNIKFVP----AEARTGL---L 92
Query: 116 TNEQKSKINEKQRLHARELIVPRRPKWNESMTRFELERLEKEAFLEWRRKLAYLQEDNED 175
+ E+ +I + + + L +PRRP WN++ T EL++ EK+ FLEWRR+L L+E+ +
Sbjct: 93 SFEESQRIKKLHEENKQFLCIPRRPNWNQNTTPEELKQAEKDNFLEWRRQLVRLEEEQK- 151
Query: 176 LLLTPFERNIEVWRQLWRVVERCDLVVQIVDARDPLLFRSTDLEKYVKEVDDRKQNLLLI 235
L+LTPFERN++ WRQLWRV+ER D+VVQIVDAR+PLLFR DLE YVKE+D K+N++LI
Sbjct: 152 LILTPFERNLDFWRQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKEMDANKENVILI 211
Query: 236 NKADLLTRKQRIIWAKYLLSRGISFTFFSA 265
NKADLLT +QR WA Y + F+SA
Sbjct: 212 NKADLLTAEQRSAWAMYFEKEDVKVIFWSA 241
>7298708 [R] KOG1424 Predicted GTP-binding protein MMR1
Length = 575
Score = 142 bits (358), Expect = 2e-33
Identities = 114/388 (29%), Positives = 178/388 (45%), Gaps = 32/388 (8%)
Query: 137 PRRPKWNESMTRFELERLEKEAFLEWRRKLAYLQEDNEDLLLTPFERNIEVWRQLWRVVE 196
P RP W + ++ EL+R E F E+ +L Q + L+ FE N+E WRQLWRV+E
Sbjct: 113 PVRPPWTLTESKEELDRTENRYFKEYVDELQKKQRAGDSKELSLFELNLETWRQLWRVLE 172
Query: 197 RCDLVVQIVDARDPLLFRSTDLEKYVKEVDDRKQNLLLINKADLLTRKQRIIWAKYLLSR 256
D+++ IVD R L L Y+ +K +++ NK DL+ + W +Y R
Sbjct: 173 FSDILLIIVDVRYATLMFPPSLYDYIINTL-KKHAIVVFNKVDLVEPHAVVAWRQYFRDR 231
Query: 257 --GISFTFFSA--AKANEILERQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNKEILD 312
+ F++ ++ + +R ++I +
Sbjct: 232 YPQLPVVLFASFLPRSRKGSQRGPQAHRRSMEGVYNIYKECQRYVQGEVDLTTWEQKIRE 291
Query: 313 KINILKIDQLEELF------------LDKAPNDPLLPPLPGQEPIIQIGLVGYPNVGKSS 360
+ ++D L+E+ +D P++ + ++ IG +G+PNVGKSS
Sbjct: 292 DMRSDQLDILDEISTAVEGELKISSSIDTTPHEHV----KYHSGVLTIGCIGFPNVGKSS 347
Query: 361 TINALVGAKKVSVSSTPGKTKHFQTIKLSDKVTLCDCPGLVFPNFAYNKGELVCNGVLPI 420
INAL G K VSVS TPG TKHFQTI L+ V LCDCPGLVFP+ + K V G PI
Sbjct: 348 LINALKGRKVVSVSRTPGHTKHFQTIFLTPLVRLCDCPGLVFPS-STPKSLQVLLGSFPI 406
Query: 421 DQLRDYIGPSTLVAERVPKYFLEAIYGIHIQTKSVEEGGNGEVPTAQELLVAYARARGYM 480
QL + E + L + +H+ E +A + A+A RG++
Sbjct: 407 SQLAVPYRSLKFLGEHLN---LPQLLRLHLPEDYDEW-------SAVAISDAWAYKRGFL 456
Query: 481 TQGFGAADESRASRYILKDYVNGKLLYI 508
T D RA+ +IL+ + G+ + +
Sbjct: 457 TAKAARPDRYRAANHILRMCLAGQQMLV 484
>At3g07050 [R] KOG2484 GTPase
Length = 582
Score = 125 bits (314), Expect = 2e-28
Identities = 108/424 (25%), Positives = 178/424 (41%), Gaps = 64/424 (15%)
Query: 118 EQKSKINEKQRLHARELIVPRRPKWNESMTRFELERLEKE------AFLEWRRKLAYLQE 171
EQ+ K E +R A E I ++ E + +L ++ E +E K+ +++
Sbjct: 61 EQELKALEVRRARALEEIEQKKEARKERAKKRKLGLVDDEDTKTEGETIEDLPKVVNVRD 120
Query: 172 DNEDLLLTPFERNIEVWRQLWRVVERCDLVVQIVDARDPLLFRSTDLEKYVKEVDDRKQN 231
++E +++L +V+E D++++++DARDPL R TD+E+ V + K
Sbjct: 121 NSERAF----------YKELVKVIELSDVILEVLDARDPLGTRCTDMERMVMQAGPNKHL 170
Query: 232 LLLINKADLLTRKQRIIWAKYLLSRGISFTFFSAAKANEILERQXXXXXXXXXXXXXXXX 291
+LL+NK DL+ R+ W YL + F + +
Sbjct: 171 VLLLNKIDLVPREAAEKWLMYLREEFPAVAFKCSTQEQR--------------------- 209
Query: 292 XXXXXXXXXXXXXXVNKEILDKINILKIDQLEELFLDKAPNDPLLPPLPGQEPIIQIGLV 351
+L + L D L +L + + + L + I +G++
Sbjct: 210 ---SNLGWKSSKASKPSNMLQTSDCLGADTLIKLLKNYSRSHEL-------KKSITVGII 259
Query: 352 GYPNVGKSSTINALVGAKKVSVSSTPGKTKHFQTIKLSDKVTLCDCPGLVFPNFAYNKGE 411
G PNVGKSS IN+L A V+V +TPG T+ Q + L V L DCPG+V + N
Sbjct: 260 GLPNVGKSSLINSLKRAHVVNVGATPGLTRSLQEVHLDKNVKLLDCPGVVMLKSSGNDAS 319
Query: 412 LVCNGVLPIDQLRDYIGPSTLVAERVPKYFLEAIYGIHIQTKSVEEGGNGEVPTAQELLV 471
+ I++L D + P + + PK L +Y I + L
Sbjct: 320 IALRNCKRIEKLDDPVSPVKEILKLCPKDMLVTLYKI------------PSFEAVDDFLY 367
Query: 472 AYARARGYMTQGFGAADESRASRYILKDYVNGKLLYINPPPHMDD----DTPYTREECKE 527
A RG + +G G D A+R +L D+ GK+ Y PP D ++ E K+
Sbjct: 368 KVATVRGKLKKG-GLVDIDAAARIVLHDWNEGKIPYYTMPPKRDQGGHAESKIVTELAKD 426
Query: 528 FNKD 531
FN D
Sbjct: 427 FNID 430
>7300220 [R] KOG2484 GTPase
Length = 581
Score = 113 bits (282), Expect = 1e-24
Identities = 91/334 (27%), Positives = 145/334 (43%), Gaps = 51/334 (15%)
Query: 186 EVWRQLWRVVERCDLVVQIVDARDPLLFRSTDLEKYVKEVDDRKQNLLLINKADLLTRKQ 245
+ +++ +V+E D+V+++VDARDPL R ++E+ V+ K+ +L++NKADL+ R+
Sbjct: 139 QYFKEFRKVIENADVVLEVVDARDPLGTRCNEVERAVRGAPGNKRLVLVLNKADLVPREN 198
Query: 246 RIIWAKYLLSRGISFTFFSAA---KANEILERQXXXXXXXXXXXXXXXXXXXXXXXXXXX 302
W KY G T F A+ +AN + R+
Sbjct: 199 LNNWIKYFRRSG-PVTAFKASTQDQANRLGRRKLREMKTEKAMQGSVC------------ 245
Query: 303 XXXVNKEILDKINILKIDQLEELFLDKAPNDPLLPPLPGQEPIIQIGLVGYPNVGKSSTI 362
+ E+L + L +K G + I++G+VG PNVGKSS I
Sbjct: 246 ---IGAELL-------MSMLGNYCRNK-----------GIKTSIRVGVVGIPNVGKSSII 284
Query: 363 NALVGAKKVSVSSTPGKTKHFQTIKLSDKVTLCDCPGLVFPNFAYNKGELVCNGVLPIDQ 422
N+L + V STPG TK Q ++L K+ L DCPG+VF + N V +
Sbjct: 285 NSLTRGRSCMVGSTPGVTKSMQEVELDSKIKLIDCPGIVFTSGGEN-SHAVLKNAQRVGD 343
Query: 423 LRDYIGPSTLVAERVPKYFLEAIYGIHIQTKSVEEGGNGEVPTAQELLVAYARARGYMTQ 482
++D + V +R K + +Y I T +E A G +
Sbjct: 344 VKDPFTIAESVLKRASKEYFCTMYDI------------TNYDTFEEFFAKKAARMGKFLK 391
Query: 483 GFGAADESRASRYILKDYVNGKLLYINPPPHMDD 516
G D A+R +L D+ GK+ Y PP + +
Sbjct: 392 K-GVPDVVAAARSVLNDWNTGKIKYCTQPPEVQE 424
>Hs20555662 [R] KOG1424 Predicted GTP-binding protein MMR1
Length = 607
Score = 112 bits (280), Expect = 2e-24
Identities = 70/196 (35%), Positives = 109/196 (54%), Gaps = 11/196 (5%)
Query: 325 LFLDKAPNDPLLPPLPGQEP----IIQIGLVGYPNVGKSSTINALVGAKKVSVSSTPGKT 380
+ +++ + + P P QE ++ IG VG+PNVGKSS IN LVG K VSVS TPG T
Sbjct: 336 VLVEQQTDSAMEPTGPTQERYKDGVVTIGCVGFPNVGKSSLINGLVGRKVVSVSRTPGHT 395
Query: 381 KHFQTIKLSDKVTLCDCPGLVFPNFAYNKGELVCNGVLPIDQLRDYIGPSTLVAERVPKY 440
++FQT L+ V LCDCPGL+FP+ + +++ G+ PI Q+++ +A R+P
Sbjct: 396 RYFQTYFLTPSVKLCDCPGLIFPSLLPRQLQVLA-GIYPIAQIQEPYTAVGYLASRIPVQ 454
Query: 441 FLEAIYGIHIQTKSVEEGGNGEVPTAQELLVAYARARGYMTQGFGAADESRASRYILKDY 500
L +H++ E+ A ++ A+A RGY T D RA+ +L+
Sbjct: 455 AL-----LHLRHPEAEDPSAEHPWCAWDICEAWAEKRGYKTAKAARNDVYRAANSLLRLA 509
Query: 501 VNGKL-LYINPPPHMD 515
V+G+L L +PP + +
Sbjct: 510 VDGRLSLCFHPPGYSE 525
Score = 68.2 bits (165), Expect = 4e-11
Identities = 42/118 (35%), Positives = 64/118 (53%), Gaps = 8/118 (6%)
Query: 137 PRRPKWNESMTRFELERLEKEAFLEWRRKL--AYLQEDNEDLLLTPFERNIEVWRQLWRV 194
PRRP W+ M++ +L E+ +F ++ K+ AY E L+ FE N+E WRQLWRV
Sbjct: 130 PRRPPWSYEMSKEQLMSQEERSFQDYLGKIHGAYSSEK-----LSYFEHNLETWRQLWRV 184
Query: 195 VERCDLVVQIVDARDPLLFRSTDLEKYVKEVDDRKQNLLLINKADLLTRKQRIIWAKY 252
+E D+V+ I D R P++ L +YV + +L++NK DL + W Y
Sbjct: 185 LEMSDIVLLITDIRHPVVNFPPALYEYVTG-ELGLALVLVLNKVDLAPPALVVAWKHY 241
>Hs4885289 [R] KOG1424 Predicted GTP-binding protein MMR1
Length = 430
Score = 110 bits (276), Expect = 5e-24
Identities = 65/175 (37%), Positives = 101/175 (57%), Gaps = 7/175 (4%)
Query: 342 QEPIIQIGLVGYPNVGKSSTINALVGAKKVSVSSTPGKTKHFQTIKLSDKVTLCDCPGLV 401
++ ++ IG VG+PNVGKSS IN LVG K VSVS TPG T++FQT L+ V LCDCPGL+
Sbjct: 180 KDGVVTIGCVGFPNVGKSSLINGLVGRKVVSVSRTPGHTRYFQTYFLTPSVKLCDCPGLI 239
Query: 402 FPNFAYNKGELVCNGVLPIDQLRDYIGPSTLVAERVPKYFLEAIYGIHIQTKSVEEGGNG 461
FP+ + +++ G+ PI Q+++ +A R+P L +H++ E+
Sbjct: 240 FPSLLPRQLQVLA-GIYPIAQIQEPYTAVGYLASRIPVQAL-----LHLRHPEAEDPSAE 293
Query: 462 EVPTAQELLVAYARARGYMTQGFGAADESRASRYILKDYVNGKL-LYINPPPHMD 515
A ++ A+A RGY T D RA+ +L+ V+G++ L +PP + +
Sbjct: 294 HPWCAWDICEAWAEKRGYKTAKAARNDVYRAANSLLRLAVDGRVSLCFHPPGYSE 348
>At1g52980 [R] KOG2423 Nucleolar GTPase
Length = 576
Score = 110 bits (276), Expect = 5e-24
Identities = 93/340 (27%), Positives = 146/340 (42%), Gaps = 70/340 (20%)
Query: 179 TPFER--NIEVWRQLWRVVERCDLVVQIVDARDPLLFRSTDLEKYVKEVDDRKQNLLLIN 236
T FE+ + +W +L++V++ D++VQ++DARDP R LEK +KE K +LL+N
Sbjct: 195 TMFEKGQSKRIWGELYKVIDSSDVIVQVIDARDPQGTRCHHLEKTLKEHHKHKHMILLLN 254
Query: 237 KADLLTRKQRIIWAKYLLSRGISFTFFSAAKANEILERQXXXXXXXXXXXXXXXXXXXXX 296
K DL+ W + L + F ++
Sbjct: 255 KCDLVPAWATKGWLRVLSKEYPTLAFHAS------------------------------- 283
Query: 297 XXXXXXXXXVNKEILDKINILKIDQLEELFLDKAPNDPLLPPLPGQEPIIQIGLVGYPNV 356
VNK + + Q L DK I +G VGYPNV
Sbjct: 284 ---------VNKSFGKGSLLSVLRQFARLKSDK--------------QAISVGFVGYPNV 320
Query: 357 GKSSTINALVGAKKVSVSSTPGKTKHFQTIKLSDKVTLCDCPGLVFPNFAYNKGELVCNG 416
GKSS IN L V+ PG+TK +Q I L+ ++ L DCPG+V+ + + ++V G
Sbjct: 321 GKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYQS-RDTETDIVLKG 379
Query: 417 VLPIDQLRDYIGPSTLVAERVPKYFLEAIYGIHIQTKSVEEGGNGEVPTAQELLVAYARA 476
V+ + L D V RV K L+ Y I K E+ + L+ ++
Sbjct: 380 VVRVTNLEDASEHIGEVLRRVKKEHLQRAYKI----KDWEDD--------HDFLLQLCKS 427
Query: 477 RGYMTQGFGAADESRASRYILKDYVNGKLLYINPPPHMDD 516
G + +G G D ++ IL D+ G++ + PPP +D+
Sbjct: 428 SGKLLKG-GEPDLMTGAKMILHDWQRGRIPFFVPPPKLDN 466
>7302756 [R] KOG2423 Nucleolar GTPase
Length = 674
Score = 102 bits (254), Expect = 2e-21
Identities = 112/427 (26%), Positives = 183/427 (42%), Gaps = 88/427 (20%)
Query: 187 VWRQLWRVVERCDLVVQIVDARDPLLFRSTDLEKYVKEVDDRKQNLLLINKADLLTRKQR 246
+W +L +VV+ D+++Q++DARDP+ RS +E+++++ K ++NK DL+
Sbjct: 211 IWNELHKVVDASDVLLQVLDARDPMGTRSKYIEEFLRKEKPHKHLFFILNKVDLVPVWVT 270
Query: 247 IIWAKYLLSRGISFTFFSAAKANEILERQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV 306
W L + + F ++ +
Sbjct: 271 QRWVAILSAEYPTIAFHASLQ------------------------------------HPF 294
Query: 307 NKEILDKINILKIDQLEELFLDKAPNDPLLPPLPGQEPIIQIGLVGYPNVGKSSTINALV 366
K L IN+ + QL +L LDK I +G +GYPNVGKSS INAL
Sbjct: 295 GKGAL--INLFR--QLGKLHLDKKQ--------------ISVGFIGYPNVGKSSVINALR 336
Query: 367 GAKKVSVSSTPGKTKHFQTIKLSDKVTLCDCPGLVFPNFAYNKGELVCNGVLPIDQL--- 423
K V+ G+TK +Q I L ++ L DCPG+V+P A E V GV+ ++ +
Sbjct: 337 SKKVCKVAPIAGETKVWQYITLMKRIFLIDCPGVVYPT-AETDTEKVLKGVVRVELVTNP 395
Query: 424 RDYIGPSTLVAERVPKYFLEAIYGIHIQTKSVEEGGNGEVPTAQELLVAYARARGYMTQG 483
DY+ + +RV ++ Y I E N T+ L A+ G + +G
Sbjct: 396 EDYVDS---LLKRVRPEYISKNYKI--------EHWN----TSTHFLEQLAQKTGKLLKG 440
Query: 484 FGAADESRASRYILKDYVNGKL-LYINPPPHMDDDTPYTREE---CKEFNKDLYTFSKLP 539
G D + +R +L D+ GKL Y+ P + +EE ++ N+D S+ P
Sbjct: 441 -GEPDVTVTARMVLNDWQRGKLPFYVPPEGFAVPKSQEGKEEEVVAEDPNED--AKSEAP 497
Query: 540 INRQEQLAEAAKHKGIQDLDLARDLSRLTFSAHIGGDGDKV------QAKSVNHGGKQAA 593
E + +A + K IQD R L + D D + Q K+ K+A
Sbjct: 498 TFVSESVKKAREFKQIQDFRKIR--VGLEYEQEDVKDLDHIDLELLEQQKAERAAKKKAR 555
Query: 594 LYNVADE 600
++N+ +E
Sbjct: 556 IHNLGEE 562
>CE02270 [R] KOG2484 GTPase
Length = 556
Score = 99.0 bits (245), Expect = 2e-20
Identities = 86/346 (24%), Positives = 147/346 (41%), Gaps = 59/346 (17%)
Query: 193 RVVERCDLVVQIVDARDPLLFRSTDLEKYVKEVDDRKQNLLLINKADLLTRKQRIIWAKY 252
+ VE D+++Q++DARDPL RS +E V + K+ +LL+NK DL+ R+ W +Y
Sbjct: 143 KTVEIADVIIQVLDARDPLGSRSKSVEDQV--LKGGKRLVLLLNKIDLVPRENVQKWLEY 200
Query: 253 LLSRGISFTFFSAAKANEILERQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNKEILD 312
L + + F ++ + + N IL+
Sbjct: 201 LRGQFPTIAFKASTQEQK------------------------------SNIGRFNSAILN 230
Query: 313 KINILKI---DQLEELFLDKAPNDPLLPPLPGQEPIIQIGLVGYPNVGKSSTINALVGAK 369
K D + ++ + N + + I++G+VG+PNVGKSS IN+L K
Sbjct: 231 NTETSKCVGADIVMKILANYCRNKDI-------KTSIRVGVVGFPNVGKSSVINSLKRRK 283
Query: 370 KVSVSSTPGKTKHFQTIKLSDKVTLCDCPGLVFPNFA-YNKGELVCNGVLPIDQLRDYIG 428
+V + PG TK Q ++L + L D PG++ + + E+ + +D L D I
Sbjct: 284 ACNVGNLPGITKEIQEVELDKNIRLIDSPGVILVSQKDLDPIEVALKNAIRVDNLLDPIA 343
Query: 429 PSTLVAERVPKYFLEAIYGIHIQTKSVEEGGNGEVPTAQELLVAYARARGYMTQGFGAAD 488
P + R K + Y + + + + L AR G + +G D
Sbjct: 344 PVHAILRRCSKETIMLHYNL------------ADFNSVDQFLAQLARRIGKLRRG-ARPD 390
Query: 489 ESRASRYILKDYVNGKLLYINPPPHM---DDDTPYTREECKEFNKD 531
+ A++ +L D+ GKL Y PP +D E +F+K+
Sbjct: 391 VNAAAKRVLNDWNTGKLRYYTHPPEQGTAKEDIVVPAEVVSQFSKE 436
>ECU08g0240 [R] KOG1424 Predicted GTP-binding protein MMR1
Length = 410
Score = 98.2 bits (243), Expect = 3e-20
Identities = 66/166 (39%), Positives = 90/166 (53%), Gaps = 28/166 (16%)
Query: 348 IGLVGYPNVGKSSTINALVGAKKVSVSSTPGKTKHFQTIKLSDKVTLCDCPGLVFPNFAY 407
+G VGYPNVGKSSTIN+++ +K+V VS TPGKTKH QTI++ L DCPGLVFP +
Sbjct: 246 VGFVGYPNVGKSSTINSIMNSKRVKVSQTPGKTKHIQTIQVESGPCLLDCPGLVFP--GH 303
Query: 408 NKGELVCNGVLPIDQL------RDYIGPSTLVAERVPKYFLEAIYGIHIQTKSVEEGGNG 461
+K L+ +G+L +DQL DYI + + Y L Y Q+K G N
Sbjct: 304 DKISLILHGILNVDQLLDLNSSLDYIVEFIGINKLCRFYSLRGFYNDSRQSK----GAN- 358
Query: 462 EVPTAQELLVAYARARGYMTQGFGAADESRASRYILKDYVNGKLLY 507
Y T+G+ A SR + I+KD+ +GK+ Y
Sbjct: 359 -----------YINLMS-TTKGWTA---SRCLKTIVKDFASGKIHY 389
Score = 73.9 bits (180), Expect = 7e-13
Identities = 48/139 (34%), Positives = 75/139 (53%), Gaps = 24/139 (17%)
Query: 135 IVPRRPKWNESMTRFELERLEKEAFLEWRRKLAYLQEDNEDLLLTPFERNIEVWRQLWRV 194
I PR P +E + + + +EK+ F W+ + + + FERNIE+WRQLW
Sbjct: 122 IPPRTP--HEEVGKEIFKEVEKKVFDLWKGRQKH----------SVFERNIEIWRQLWIT 169
Query: 195 VERCDLVVQIVDARDPLLFRSTDLEKYVKEVDDRKQNLLLINKADLLTRKQRIIWAKYLL 254
ER D+++QIVDAR+P F + D V+++ K+++LL+NKADL + I
Sbjct: 170 CERSDVIIQIVDARNPRFFLNDD----VRKLYPGKEHVLLVNKADLSPSRTVI------- 218
Query: 255 SRGISFTFFSAAKANEILE 273
G ++SA N +LE
Sbjct: 219 -EGYRCFYYSALDDNRLLE 236
>ECU09g1650 [R] KOG2423 Nucleolar GTPase
Length = 418
Score = 85.9 bits (211), Expect = 2e-16
Identities = 76/325 (23%), Positives = 138/325 (42%), Gaps = 72/325 (22%)
Query: 187 VWRQLWRVVERCDLVVQIVDARDPLLFRSTDLEKYVKEVDDRKQNLLLINKADLLTRKQR 246
+W +L++V++ D+++ ++DARDP+ + Y+KE K + ++NK DL+
Sbjct: 159 IWLELYKVLDSSDVIIHVLDARDPMGTMCEKIASYIKEEAPHKHLMYVLNKVDLIPTGVT 218
Query: 247 IIWAKYLLSRGISFTFFSAAKANEILERQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV 306
W ++ + + S + N
Sbjct: 219 AKWLRHFSRLHPTIAYHSNSITN------------------------------------- 241
Query: 307 NKEILDKINILKIDQLEELFLDKAPNDPLLPPLPGQEPIIQIGLVGYPNVGKSSTINALV 366
N + I++LK QL +L+ ++ + +G VGYPN GKSS IN L
Sbjct: 242 NYGKANLISLLK--QLSKLY---------------KKSHLSVGFVGYPNTGKSSIINTLR 284
Query: 367 GAKKVSVSSTPGKTKHFQTIKLSDKVTLCDCPGLVFPNFAYNKGELVCNGVLPIDQLRDY 426
+ V+ PG+TK +Q I L+ + L DCPG+V + N + V G + I+ + +
Sbjct: 285 NKEVCKVAPIPGETKVWQYITLTRGIYLIDCPGIVPIS---NYDQAVLRGAVRIENIEN- 340
Query: 427 IGPSTLVAERVPKYFLEAIYGIHIQTKSVEEGGNGEVPTAQELLVAYARARGYMTQGFGA 486
P+ +++ I + S+ + + +L+ A G + +G G
Sbjct: 341 -----------PEDYVDMI--VEKARDSIVKTYKIRFLDSADLVERLAIKFGKLQKG-GE 386
Query: 487 ADESRASRYILKDYVNGKLLYINPP 511
+ + S+ IL D+V GK+ Y PP
Sbjct: 387 PNTNVVSKMILHDWVRGKIPYFVPP 411
>YNR053c [R] KOG2423 Nucleolar GTPase
Length = 486
Score = 82.8 bits (203), Expect = 1e-15
Identities = 57/179 (31%), Positives = 88/179 (48%), Gaps = 14/179 (7%)
Query: 346 IQIGLVGYPNVGKSSTINALVGAKKVSVSSTPGKTKHFQTIKLSDKVTLCDCPGLVFPNF 405
I +G +GYPN GKSS IN L K V+ PG+TK +Q I L ++ L DCPG+V P+
Sbjct: 316 ISVGFIGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYITLMKRIFLIDCPGIVPPSS 375
Query: 406 AYNKGELVCNGVLPIDQLRDYIGPSTLVAERVPKYFLEAIYGIHIQTKSVEEGGNGEVPT 465
++ +++ GV+ ++ + V +R LE Y I
Sbjct: 376 KDSEEDILFRGVVRVEHVTHPEQYIPGVLKRCQVKHLERTYEI------------SGWKD 423
Query: 466 AQELLVAYARARGYMTQGFGAADESRASRYILKDYVNGKL-LYINPPPHMDDDTPYTRE 523
A E + AR +G + +G G DES S+ IL D+ GK+ ++ PP ++ P +E
Sbjct: 424 ATEFIEILARKQGRLLKG-GEPDESGVSKQILNDFNRGKIPWFVLPPEKEGEEKPKKKE 481
Score = 58.9 bits (141), Expect = 2e-08
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 12/130 (9%)
Query: 143 NESMTRFELERLEKEAFLEWRRKLAYLQEDNEDLLLTPFERNI-------EVWRQLWRVV 195
NE +T++E EK+ L+ L QED E+ + + I +W +L++V+
Sbjct: 165 NEDITKYE----EKQV-LDATLGLMGNQEDKENGWTSAAKEAIFSKGQSKRIWNELYKVI 219
Query: 196 ERCDLVVQIVDARDPLLFRSTDLEKYVKEVDDRKQNLLLINKADLLTRKQRIIWAKYLLS 255
+ D+V+ ++DARDPL R +E+Y+K+ K + ++NK DL+ W K+L
Sbjct: 220 DSSDVVIHVLDARDPLGTRCKSVEEYMKKETPHKHLIYVLNKCDLVPTWVAAAWVKHLSK 279
Query: 256 RGISFTFFSA 265
+ F ++
Sbjct: 280 ERPTLAFHAS 289
>SPAC6F6.03c [R] KOG2423 Nucleolar GTPase
Length = 537
Score = 82.0 bits (201), Expect = 3e-15
Identities = 53/166 (31%), Positives = 84/166 (49%), Gaps = 13/166 (7%)
Query: 346 IQIGLVGYPNVGKSSTINALVGAKKVSVSSTPGKTKHFQTIKLSDKVTLCDCPGLVFPNF 405
I +GL+G+PN GKSS IN L K +V+ PG+TK +Q + L ++ L DCPG+V P+
Sbjct: 311 ISVGLIGFPNAGKSSIINTLRKKKVCNVAPIPGETKVWQYVALMKRIFLIDCPGIVPPSS 370
Query: 406 AYNKGELVCNGVLPIDQLRDYIGPSTLVAERVPKYFLEAIYGIHIQTKSVEEGGNGEVPT 465
+ EL+ GV+ ++ + + V R LE Y I G N
Sbjct: 371 NDSDAELLLKGVVRVENVSNPEAYIPTVLSRCKVKHLERTYEI--------SGWN----D 418
Query: 466 AQELLVAYARARGYMTQGFGAADESRASRYILKDYVNGKLLYINPP 511
+ E L A+ G + +G G DE+ ++ +L D++ GK+ + P
Sbjct: 419 STEFLAKLAKKGGRLLKG-GEPDEASVAKMVLNDFMRGKIPWFIGP 463
Score = 58.5 bits (140), Expect = 3e-08
Identities = 33/137 (24%), Positives = 73/137 (53%), Gaps = 9/137 (6%)
Query: 138 RRPKWN-ESMTRFELERLEKEAFLEWR--RKLAYLQEDNEDLLLTPFE------RNIEVW 188
+RPK + +S+ E EK+ E + ++ ++++D++L + ++ +W
Sbjct: 148 KRPKISFDSVAELAKESDEKQNAYEEKIEERILANPDESDDVMLAARDAIFSKGQSKRIW 207
Query: 189 RQLWRVVERCDLVVQIVDARDPLLFRSTDLEKYVKEVDDRKQNLLLINKADLLTRKQRII 248
+L++V++ D+++Q++DARDP+ R +E+Y++ K +L++NK DL+
Sbjct: 208 NELYKVIDSSDVLIQVLDARDPVGTRCGTVERYLRNEASHKHMILVLNKVDLVPTSVAAA 267
Query: 249 WAKYLLSRGISFTFFSA 265
W K L + F ++
Sbjct: 268 WVKILAKEYPTIAFHAS 284
>CE20084 [R] KOG2423 Nucleolar GTPase
Length = 639
Score = 80.5 bits (197), Expect = 7e-15
Identities = 58/210 (27%), Positives = 99/210 (46%), Gaps = 18/210 (8%)
Query: 344 PIIQIGLVGYPNVGKSSTINALVGAKKVSVSSTPGKTKHFQTIKLSDKVTLCDCPGLVFP 403
P I +G +GYPNVGKSS +N L K + G+TK +Q + L ++ L D PG+V+P
Sbjct: 265 PQISVGFIGYPNVGKSSLVNTLRKKKVCKTAPIAGETKVWQYVMLMRRIYLIDSPGVVYP 324
Query: 404 NFAYNKGELVCNGVLPIDQLRDYIGPSTLVAERVPKYFLEAIYGIHIQTKSVEEGGNGEV 463
++ +++ GV+ ++ ++D V +R L YGI E
Sbjct: 325 Q-GDSETQIILKGVVRVENVKDPENHVQGVLDRCKPEHLRRQYGI------------PEF 371
Query: 464 PTAQELLVAYARARGYMTQGFGAADESRASRYILKDYVNGKLLYINPPPHMDD--DTPYT 521
+ L A +G + +G G D S+ +L ++ GKL Y PPP ++ ++
Sbjct: 372 TDVDDFLTKIAIKQGRLLKG-GDPDIVAVSKVVLNEFQRGKLPYFVPPPGCEERAKKDFS 430
Query: 522 REECKEFNKDLYTFSKLPINRQEQLAEAAK 551
+ E D +LP++ Q +L + A+
Sbjct: 431 QAPINEMCAD--DDEQLPLDAQLELDDVAR 458
Score = 51.6 bits (122), Expect = 4e-06
Identities = 22/55 (40%), Positives = 39/55 (70%)
Query: 187 VWRQLWRVVERCDLVVQIVDARDPLLFRSTDLEKYVKEVDDRKQNLLLINKADLL 241
VW +L++V++ D+VVQ+VDARDP+ R +E+++++ K + +INK DL+
Sbjct: 162 VWGELYKVIDSSDVVVQVVDARDPMGTRCRHVEEFLRKEKPHKHLVTVINKVDLV 216
>CE20083 [R] KOG2423 Nucleolar GTPase
Length = 698
Score = 80.5 bits (197), Expect = 7e-15
Identities = 58/210 (27%), Positives = 99/210 (46%), Gaps = 18/210 (8%)
Query: 344 PIIQIGLVGYPNVGKSSTINALVGAKKVSVSSTPGKTKHFQTIKLSDKVTLCDCPGLVFP 403
P I +G +GYPNVGKSS +N L K + G+TK +Q + L ++ L D PG+V+P
Sbjct: 324 PQISVGFIGYPNVGKSSLVNTLRKKKVCKTAPIAGETKVWQYVMLMRRIYLIDSPGVVYP 383
Query: 404 NFAYNKGELVCNGVLPIDQLRDYIGPSTLVAERVPKYFLEAIYGIHIQTKSVEEGGNGEV 463
++ +++ GV+ ++ ++D V +R L YGI E
Sbjct: 384 Q-GDSETQIILKGVVRVENVKDPENHVQGVLDRCKPEHLRRQYGI------------PEF 430
Query: 464 PTAQELLVAYARARGYMTQGFGAADESRASRYILKDYVNGKLLYINPPPHMDD--DTPYT 521
+ L A +G + +G G D S+ +L ++ GKL Y PPP ++ ++
Sbjct: 431 TDVDDFLTKIAIKQGRLLKG-GDPDIVAVSKVVLNEFQRGKLPYFVPPPGCEERAKKDFS 489
Query: 522 REECKEFNKDLYTFSKLPINRQEQLAEAAK 551
+ E D +LP++ Q +L + A+
Sbjct: 490 QAPINEMCAD--DDEQLPLDAQLELDDVAR 517
Score = 51.6 bits (122), Expect = 4e-06
Identities = 22/55 (40%), Positives = 39/55 (70%)
Query: 187 VWRQLWRVVERCDLVVQIVDARDPLLFRSTDLEKYVKEVDDRKQNLLLINKADLL 241
VW +L++V++ D+VVQ+VDARDP+ R +E+++++ K + +INK DL+
Sbjct: 221 VWGELYKVIDSSDVVVQVVDARDPMGTRCRHVEEFLRKEKPHKHLVTVINKVDLV 275
>SPBC26H8.08c [R] KOG2484 GTPase
Length = 470
Score = 80.1 bits (196), Expect = 1e-14
Identities = 89/361 (24%), Positives = 152/361 (41%), Gaps = 68/361 (18%)
Query: 189 RQLWRVVERCDLVVQIVDARDPLLFRSTDLEKYVKEVD-DRKQNLLLINKADLLTRKQRI 247
++ +VVE D+++ ++DARDP RS D+E+ V + K+ + +INK DL+ +
Sbjct: 154 KEFKKVVEASDVILYVLDARDPEGTRSKDVERQVLASSAEEKRLIFVINKIDLVPSEVLN 213
Query: 248 IWAKYLLSRGISFTFFSAA-KANEILERQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV 306
W YL + + SA+ N L+ Q
Sbjct: 214 KWVTYLRNFFPTIPMRSASGSGNSNLKHQSASASSTIS---------------------- 251
Query: 307 NKEILDKINILKIDQLEELFLDKAPNDPLLPPLPGQEPIIQIGLVGYPNVGKSSTINALV 366
N+LK L+ K L +G++GYPNVGKSS INALV
Sbjct: 252 --------NLLK--SLKSYSAKKKLKSSLT-----------VGVIGYPNVGKSSVINALV 290
Query: 367 G------AKKVSVSSTPGKTKHFQTIKLSDKVTLCDCPGLVFPNFAYNKG--ELVCNGVL 418
+ + G T + +KL +K+ L D PG+VFP+ LV +
Sbjct: 291 NRSANGRSAPCPAGNVAGMTTSLREVKLDNKLRLVDSPGIVFPSSDSKDDLYRLVMLNAV 350
Query: 419 PIDQLRDYIGPSTLVAE---RVPKYFLEAIYGIHIQTKSVEEGGNGEVPTAQELLVAYAR 475
++ D + ++ + + RVP LE ++ + + ++ TA + LV AR
Sbjct: 351 SSTKVDDPVAVASYILQFLSRVPGQ-LERMFQRYELPPLL---NTSDIDTATDFLVNIAR 406
Query: 476 ARGYMTQGFGAADESRASRYILKDYVNGKLLYINPPPHMDD-------DTPYTREECKEF 528
RG + +G G + + A+ ++ D+ G++ + P +++ DT E KEF
Sbjct: 407 KRGRLGRG-GIPNLNAAANIVINDWHAGRIEWWAEPEVINEKNSSEVQDTQIVTEWAKEF 465
Query: 529 N 529
+
Sbjct: 466 D 466
>Hs7019419 [R] KOG2423 Nucleolar GTPase
Length = 731
Score = 79.3 bits (194), Expect = 2e-14
Identities = 52/173 (30%), Positives = 88/173 (50%), Gaps = 20/173 (11%)
Query: 346 IQIGLVGYPNVGKSSTINALVGAKKVSVSSTPGKTKHFQTIKLSDKVTLCDCPGLVFPNF 405
I +G +GYPNVGKSS IN L K +V+ G+TK +Q I L ++ L DCPG+V+P+
Sbjct: 311 ISVGFIGYPNVGKSSVINTLRSKKVCNVAPIAGETKVWQYITLMRRIFLIDCPGVVYPS- 369
Query: 406 AYNKGELVCNGVLPIDQLR---DYIGPSTLVAERVPKYFLEAIYGIHIQTKSVEEGGNGE 462
++ ++V GV+ +++++ D+IG V ER ++ Y I
Sbjct: 370 EDSETDIVLKGVVQVEKIKSPEDHIG---AVLERAKPEYISKTYKI------------DS 414
Query: 463 VPTAQELLVAYARARGYMTQGFGAADESRASRYILKDYVNGKLLYINPPPHMD 515
A++ L A G + +G G D + +L D+ G++ + PP+ +
Sbjct: 415 WENAEDFLEKLAFRTGKLLKG-GEPDLQTVGKMVLNDWQRGRIPFFVKPPNAE 466
Score = 53.5 bits (127), Expect = 1e-06
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 187 VWRQLWRVVERCDLVVQIVDARDPLLFRSTDLEKYVKEVDDRKQNLLLINKADLLTRKQR 246
+W +L++V++ D+VVQ++DARDP+ RS +E Y+K+ K + ++NK DL+
Sbjct: 206 IWGELYKVIDSSDVVVQVLDARDPMGTRSPHIETYLKKEKPWKHLIFVLNKCDLVPTWAT 265
Query: 247 IIWAKYLLSRGISFTFFSAAKAN 269
W +LS+ F A+ N
Sbjct: 266 KRWVA-VLSQDYPTLAFHASLTN 287
>Hs9506611 [R] KOG2484 GTPase
Length = 582
Score = 78.2 bits (191), Expect = 4e-14
Identities = 53/167 (31%), Positives = 83/167 (48%), Gaps = 15/167 (8%)
Query: 346 IQIGLVGYPNVGKSSTINALVGAKKVSVSSTPGKTKHFQTIKLSDKVTLCDCPGLVFPNF 405
I++G+VG PNVGKSS IN+L ++ SV + PG TK Q + L + L D PG+V P
Sbjct: 253 IRVGVVGLPNVGKSSLINSLKRSRACSVGAVPGITKFMQEVYLDKFIRLLDAPGIV-PGP 311
Query: 406 AYNKGELVCNGVLPIDQLRDYIGPSTLVAERVPKYFLEAIYGIHIQTKSVEEGGNGEVPT 465
G ++ N V + +L D + P + +R + YG+ T
Sbjct: 312 NSEVGTILRNCV-HVQKLADPVTPVETILQRCNLEEISNYYGV------------SGFQT 358
Query: 466 AQELLVAYARARGYMTQGFGAADESRASRYILKDYVNGKLLYINPPP 512
+ L A A G +G G + +A++ +L D+V+GK+ + PPP
Sbjct: 359 TEHFLTAVAHRLGKKKKG-GLYSQEQAAKAVLADWVSGKISFYIPPP 404
>YER006w [R] KOG2484 GTPase
Length = 520
Score = 61.6 bits (148), Expect = 4e-09
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 13/172 (7%)
Query: 346 IQIGLVGYPNVGKSSTINALVG-----AKKVSVSSTPGKTKHFQTIKLSDKVTLCDCPGL 400
I +G++GYPNVGKSS INAL+ +K V + G T + IK+ +K+ + D PG+
Sbjct: 281 IVVGVIGYPNVGKSSVINALLARRGGQSKACPVGNEAGVTTSLREIKIDNKLKILDSPGI 340
Query: 401 VFP------NFAYNKGELVCNGVLPIDQLRDYIGPSTLVAERVPKYFLEAIYGIHIQTKS 454
FP + ++ EL LP + D ++ +R+ K E +
Sbjct: 341 CFPSENKKRSKVEHEAELALLNALPAKHIVDPYPAVLMLVKRLAKSD-EMTESFKKLYEI 399
Query: 455 VEEGGNGEVPTAQELLVAYARARGYMTQGFGAADESRASRYILKDYVNGKLL 506
N + L+ AR RG + +G G + + A +L D+ +GK+L
Sbjct: 400 PPIPANDADTFTKHFLIHVARKRGRLGKG-GIPNLASAGLSVLNDWRDGKIL 450
>At4g02790 [R] KOG2484 GTPase
Length = 375
Score = 54.3 bits (129), Expect = 6e-07
Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 19/168 (11%)
Query: 346 IQIGLVGYPNVGKSSTINALVGAKKVSVSSTPGKTKHFQTIKLSDKVTLCDCPGLVFPNF 405
++ G++GYPNVGKSS IN L+ K + + PG T+ + +KL + L D PG++
Sbjct: 217 VRAGIIGYPNVGKSSLINRLLKRKICAAAPRPGVTREMKWVKLGKDLDLLDSPGMLPMRI 276
Query: 406 AYNKGEL---VCNGV-LPIDQLRDYIGPSTLVAERVPKYFLEAIYGIHIQTKSVEEGGNG 461
+ +C+ + D G + R+P+ +A+Y + K EG G
Sbjct: 277 DDQAAAIKLAICDDIGEKAYDFTDVAGILVQMLARIPEVGAKALYN---RYKIQLEGNCG 333
Query: 462 EVPTAQELLVAYARARGYMTQGFGAADESRASRYILKDYVNGKLLYIN 509
+ + + G G D +A+ IL D+ GK Y++
Sbjct: 334 K---------KFVKTLGLNLFG---GDSHQAAFRILTDFRKGKFGYVS 369
>Hs7657048 [R] KOG2484 GTPase
Length = 560
Score = 52.0 bits (123), Expect = 3e-06
Identities = 39/157 (24%), Positives = 79/157 (49%), Gaps = 11/157 (7%)
Query: 115 LTNEQKSKINEKQRL-HARELIVPRRPKWNESMTRFELERLEKEAFLEWRRKLAYLQEDN 173
L ++ ++ ++Q+L +EL R+ + N + +E +EKE L A + N
Sbjct: 66 LRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQN 125
Query: 174 EDLLLTPFERNIEVWRQLWRVVERCDLVVQIVDARDPLLFRSTDLEKYVKEVDDRKQNLL 233
L ++L +V+E D+V++++DARDPL R +E+ + + +K+ +L
Sbjct: 126 SKKLYC---------QELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQ-SGQKKLVL 175
Query: 234 LINKADLLTRKQRIIWAKYLLSRGISFTFFSAAKANE 270
++NK+DL+ ++ W YL + F ++ K +
Sbjct: 176 ILNKSDLVPKENLESWLNYLKKELPTVVFRASTKPKD 212
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.136 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,541,273
Number of Sequences: 60738
Number of extensions: 1532989
Number of successful extensions: 4539
Number of sequences better than 1.0e-05: 27
Number of HSP's better than 0.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 4440
Number of HSP's gapped (non-prelim): 55
length of query: 648
length of database: 30,389,216
effective HSP length: 113
effective length of query: 535
effective length of database: 23,525,822
effective search space: 12586314770
effective search space used: 12586314770
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)