ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI1821 check: MH YU KOG2445 Intracellular trafficking, secretion, and vesicular transport Nuclear pore complex component (sc Seh1)
r_klactVI1821 check: MH YU KOG2445 Nuclear structure Nuclear pore complex component (sc Seh1)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI1821 651509 650478 -344
(344 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YGL100w [YU] KOG2445 Nuclear pore complex component (sc Seh1) 503 e-142
SPAC15F9.02 [YU] KOG2445 Nuclear pore complex component (sc Seh1) 291 1e-78
Hs13654288 [YU] KOG2445 Nuclear pore complex component (sc Seh1) 213 4e-55
7304117 [YU] KOG2445 Nuclear pore complex component (sc Seh1) 199 6e-51
CE16629 [YU] KOG2445 Nuclear pore complex component (sc Seh1) 131 2e-30
7300991 [U] KOG1332 Vesicle coat complex COPII subunit SEC13 129 6e-30
At3g01340 [U] KOG1332 Vesicle coat complex COPII subunit SEC13 121 2e-27
Hs13491164 [U] KOG1332 Vesicle coat complex COPII subunit SEC13 120 2e-27
At2g30050 [U] KOG1332 Vesicle coat complex COPII subunit SEC13 117 2e-26
SPBC215.15 [U] KOG1332 Vesicle coat complex COPII subunit SEC13 111 1e-24
YLR208w [U] KOG1332 Vesicle coat complex COPII subunit SEC13 106 6e-23
At1g64350 [YU] KOG2445 Nuclear pore complex component (sc Seh1) 99 7e-21
CE25614 [U] KOG1332 Vesicle coat complex COPII subunit SEC13 96 8e-20
CE25615 [U] KOG1332 Vesicle coat complex COPII subunit SEC13 83 7e-16
Hs4757988 [R] KOG0645 WD40 repeat protein 66 8e-11
7303130 [R] KOG0645 WD40 repeat protein 66 8e-11
YCR072c [S] KOG0271 Notchless-like WD40 repeat-containing protein 61 3e-09
YDR267c [R] KOG0645 WD40 repeat protein 60 4e-09
SPAC806.02c_2 [R] KOG0645 WD40 repeat protein 59 8e-09
Hs13376840 [R] KOG4155 FOG: WD40 repeat 59 1e-08
7299285 [R] KOG4155 FOG: WD40 repeat 58 2e-08
7296187 [S] KOG0271 Notchless-like WD40 repeat-containing protein 58 2e-08
Hs4557741 [S] KOG0295 WD40 repeat-containing protein 58 2e-08
At5g67320 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 57 3e-08
Hs4505731 [U] KOG0277 Peroxisomal targeting signal type 2 receptor 56 9e-08
At5g56130 [S] KOG1407 WD40 repeat protein 56 9e-08
Hs19913371 [B] KOG0273 Beta-transducin family (WD-40 repeat) pro... 55 2e-07
7296209 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 55 2e-07
Hs15150805 [B] KOG0273 Beta-transducin family (WD-40 repeat) pro... 54 3e-07
7302979 [S] KOG0295 WD40 repeat-containing protein 54 4e-07
SPAC6B12.15 [T] KOG0279 G protein beta subunit-like protein 52 1e-06
Hs5032159 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 52 1e-06
At4g29830 [R] KOG4155 FOG: WD40 repeat 52 1e-06
At5g08560 [S] KOG0293 WD40 repeat-containing protein 52 1e-06
At2g26060 [R] KOG0645 WD40 repeat protein 52 1e-06
SPAP17D4.01 [U] KOG0277 Peroxisomal targeting signal type 2 rece... 52 2e-06
Hs16445424 [Z] KOG0313 Microtubule binding protein YTM1 (contain... 50 5e-06
At3g49660 [R] KOG0266 WD40 repeat-containing protein 50 5e-06
Hs4502123_2 [R] KOG4155 FOG: WD40 repeat 50 5e-06
CE29339 [S] KOG0295 WD40 repeat-containing protein 50 6e-06
>YGL100w [YU] KOG2445 Nuclear pore complex component (sc Seh1)
Length = 349
Score = 503 bits (1295), Expect = e-142
Identities = 239/347 (68%), Positives = 276/347 (78%), Gaps = 5/347 (1%)
Query: 1 MKPFLTGHSDLVHDISYDFYGRRVATCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVS 60
M+PF +GH DLVHD+ YDFYGR VATCSSDQHIKVFKLDK+T+ WELS+SW+AHDSSIV+
Sbjct: 1 MQPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVA 60
Query: 61 LDWAAPEFGRIIASVSYDKTIKLWEEDPDALELSGKRWQKLCTLNDATGPLFSVKFAPSH 120
+DWA+PE+GRIIAS SYDKT+KLWEEDPD E SG+RW KLCTLND+ G L+SVKFAP+H
Sbjct: 61 IDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAH 120
Query: 121 LGLRLAALGNDGKLRLYDALESSDLRSWTLTSEITVLNTPPASHLQSDFCLSWCPSRFST 180
LGL+LA LGNDG LRLYDALE SDLRSWTLTSE+ VL+ PPA+HLQSDFCLSWCPSRFS
Sbjct: 121 LGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSP 180
Query: 181 ERLVISAMDQATIYQRNKQGKLVPAGHLKGHTGLIRSIAWAPSVGRWYQLIATGCKDGKL 240
E+L +SA++QA IYQR K GKL A L GH LIRSI+WAPS+GRWYQLIATGCKDG++
Sbjct: 181 EKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRI 240
Query: 241 RIFKVTESRXXXXXXXXXXXXXXXXXXRD-----GPPIDSSAIDADGSVANLHVELISEH 295
RIFK+TE D DS+ + +NL VEL+SEH
Sbjct: 241 RIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEH 300
Query: 296 SDHQGEVWSVSWNLTGTILSSTGDDGKIRLWKASYSNEFRCMSVVQA 342
DH GEVWSVSWNLTGTILSS GDDGK+RLWKA+YSNEF+CMSV+ A
Sbjct: 301 DDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMSVITA 347
>SPAC15F9.02 [YU] KOG2445 Nuclear pore complex component (sc Seh1)
Length = 339
Score = 291 bits (744), Expect = 1e-78
Identities = 139/335 (41%), Positives = 209/335 (61%), Gaps = 15/335 (4%)
Query: 6 TGHSDLVHDISYDFYGRRVATCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVSLDWAA 65
T H DLV+D++YDFYGRR+ +CS+DQ +KV+ + +T W ++ W+A D+S++ + WA
Sbjct: 11 TNHQDLVNDVTYDFYGRRMVSCSADQRVKVYDFNDDTETWAITSEWRAGDASLMRVAWAH 70
Query: 66 PEFGRIIASVSYDKTIKLWEEDPDALELSGKRWQKLCTLNDATGPLFSVKFAPSHLGLRL 125
P FG+++A S D+ ++++EE E K W ++ L DA + + F P G +L
Sbjct: 71 PSFGQVLAVCSLDRGVRIYEEQKKNFE--SKTWVEVAKLMDARSAVLDISFCPFQHGCKL 128
Query: 126 AALGNDGKLRLYDALESSDLRSWTLTSEITVLNTPPASHLQSDFCLSWCPSRFSTERLVI 185
AA+ D LR+Y+A+E +L WTL +EI ++ +PP+ + Q FC++WCPSR+ + + +
Sbjct: 129 AAVSADATLRIYEAMEPGNLTYWTLMNEIALMPSPPSRNEQPAFCVNWCPSRWREQYIAV 188
Query: 186 SAMDQATIYQRNKQGKLVPAGHLKGHTGLIRSIAWAPSVGRWYQLIATGCKDGKLRIFKV 245
M+ A IY++N GK L GHT LIR I WAPS+G Y LIAT CKDG +RIFKV
Sbjct: 189 GCMNDAYIYKQNSHGKWKKVAELPGHTDLIRDICWAPSMGSSYYLIATACKDGNVRIFKV 248
Query: 246 TESRXXXXXXXXXXXXXXXXXXRDGPPIDSSAIDADGSVANLHVELISEHSDHQGEVWSV 305
+ +S D++ ++ +L VELI E+ +H+ +VW
Sbjct: 249 -------------ETLCEEVFQEEEDAGNSMTEDSNFNLNSLKVELIGEYDNHKCQVWRC 295
Query: 306 SWNLTGTILSSTGDDGKIRLWKASYSNEFRCMSVV 340
+N+TGTILSS+GDDG +RLWKASY+N F+C+SVV
Sbjct: 296 RFNVTGTILSSSGDDGCVRLWKASYANLFKCISVV 330
>Hs13654288 [YU] KOG2445 Nuclear pore complex component (sc Seh1)
Length = 360
Score = 213 bits (541), Expect = 4e-55
Identities = 121/348 (34%), Positives = 185/348 (52%), Gaps = 52/348 (14%)
Query: 8 HSDLVHDISYDFYGRRVATCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVSLDWAAPE 67
H DL+HD+S+DF+GRR+ATCSSDQ +KV+ E+ +W + SWK H S+ + WA PE
Sbjct: 11 HKDLIHDVSFDFHGRRMATCSSDQSVKVWD-KSESGDWHCTASWKTHSGSVWRVTWAHPE 69
Query: 68 FGRIIASVSYDKTIKLWEE----DPDALELSGKRWQKLCTLNDATGPLFSVKFAPSHLGL 123
FG+++AS S+D+T +WEE D L W K TL D+ + VKFAP H+GL
Sbjct: 70 FGQVLASCSFDRTAAVWEEIVGESNDKLR-GQSHWVKRTTLVDSRTSVTDVKFAPKHMGL 128
Query: 124 RLAALGNDGKLRLYDALESSDLRSWTLTSEITVLNTPPASHLQSDFCLSWCPSRFSTERL 183
LA DG +R+Y+A + +L W+L EI S S C+SW PS
Sbjct: 129 MLATCSADGIVRIYEAPDVMNLSQWSLQHEI--------SCKLSCSCISWNPSSSRAHSP 180
Query: 184 VIS---------AMDQATIYQRNKQG-KLVPAGHLKGHTGLIRSIAWAPSVGRWYQLIAT 233
+I+ AM + I++ N+ K A L T + IA+AP++GR + ++A
Sbjct: 181 MIAVGSDDSSPNAMAKVQIFEYNENTRKYAKAETLMTVTDPVHDIAFAPNLGRSFHILAI 240
Query: 234 GCKDGKLRIFKVTESRXXXXXXXXXXXXXXXXXXRDGPPIDSSAIDADGSVANLHVELIS 293
KD +RIF + R + + G + +++
Sbjct: 241 ATKD--VRIFTLKPVR--------------------------KELTSSGGPTKFEIHIVA 272
Query: 294 EHSDHQGEVWSVSWNLTGTILSSTGDDGKIRLWKASYSNEFRCMSVVQ 341
+ +H +VW VSWN+TGT+L+S+GDDG +RLWKA+Y + ++C +++
Sbjct: 273 QFDNHNSQVWRVSWNITGTVLASSGDDGCVRLWKANYMDNWKCTGILK 320
>7304117 [YU] KOG2445 Nuclear pore complex component (sc Seh1)
Length = 354
Score = 199 bits (505), Expect = 6e-51
Identities = 112/355 (31%), Positives = 185/355 (51%), Gaps = 56/355 (15%)
Query: 1 MKPFLTGHSDLVHDISYDFYGRRVATCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVS 60
++P + H D++HD+ +D+YGRR+ATCSSDQ +K++ D + +W ++ SWKAH SI
Sbjct: 4 VEPIIADHKDVIHDVVFDYYGRRMATCSSDQTVKIWDEDGQ-GKWNVTSSWKAHSGSIWR 62
Query: 61 LDWAAPEFGRIIASVSYDKTIKLWE----EDPDALELSGKRWQKLCTLNDATGPLFSVKF 116
+ WA PEFG+++A+ S+D+T +WE E + +RW + TL D+ + V+F
Sbjct: 63 VSWAHPEFGQVVATCSFDRTASVWEEVIGEKVSSTNTPTRRWVRRTTLVDSRTSVTDVEF 122
Query: 117 APSHLGLRLAALGNDGKLRLYDALESSDLRSWTLTSEITVLNTPPASHLQSDFCLSWCPS 176
AP +LGL LA DG +R+Y+A + +L W + EI+ N P S CLSW S
Sbjct: 123 APKYLGLLLATASADGIIRIYEAPDIMNLSQWPVQHEIS--NKLPLS------CLSWNTS 174
Query: 177 RFSTERLVISAMDQAT---------IYQRNKQGKLVPAGHLKGHTGLIRSIAWAPSVGRW 227
+ +L+ + D+A Y N + K V + T + +A+AP+ GR
Sbjct: 175 TYMVTQLLAAGSDEAATPTGKVFLFAYSENSR-KCVKIDTVNDITDPVTDVAFAPNAGRT 233
Query: 228 YQLIATGCKDGKLRIFKVTESRXXXXXXXXXXXXXXXXXXRDGPPIDSSAIDADGSVANL 287
+ ++A KD + ++ + ++ L
Sbjct: 234 FHMLAVASKDLYI--------------------------------VNLRGVTDATDISKL 261
Query: 288 HVELISEHSDHQGEVWSVSWNLTGTILSSTGDDGKIRLWKASYSNEFRCMSVVQA 342
++ I + S+H VW V WN+ T+L STGDDG +RLW+ +Y+ ++RC +V++A
Sbjct: 262 DIQTI-KFSEHNCPVWRVCWNMLATMLISTGDDGCVRLWRMNYNRQWRCAAVLKA 315
>CE16629 [YU] KOG2445 Nuclear pore complex component (sc Seh1)
Length = 363
Score = 131 bits (329), Expect = 2e-30
Identities = 86/344 (25%), Positives = 162/344 (47%), Gaps = 36/344 (10%)
Query: 1 MKPFLT--GHSDLVHDISYDFYGRRVATCSSDQHIKVFKLDKETNEWELSESWKAHDSSI 58
+KPF T H DL+H +S+D +GRR+ATC+SD + ++ + N W S WK H ++
Sbjct: 7 VKPFQTVGAHRDLIHCVSFDPHGRRMATCASDMTMAIWDRKPDGN-WRRSAHWKCHGGAV 65
Query: 59 VSLDWAAPEFGRIIASVSYDKTIKLWEE----DPDALELSGKRWQKLCTLNDATGPLFSV 114
+ WA PEFG+I+A+ SYD+TI +WEE L+ +W + ++D + +
Sbjct: 66 WRVIWAHPEFGQIVATCSYDRTIVIWEEQIVRSEKDLKQKESQWIRRTIISDNRSDVTDI 125
Query: 115 KFAPSHLGLRLAALGNDGKLRLYDALESSDLRSWTLTSEITVLNTPPASHLQSDFCLSWC 174
F+P HLGL +A+ G +R+Y+A + D W L E+ +T C++W
Sbjct: 126 CFSPRHLGLMMASCNVLGTVRIYEAPDIVDASRWNLIHELQAFHTRCG-------CVTWS 178
Query: 175 PSRFSTERLVISAMDQATIYQRNKQGKLVPAGHLKGHTGLIRSIAWAPSVGRWYQL---- 230
SR + + + ++ NK+ ++V ++ G + +W ++
Sbjct: 179 LSRMHRPLIAVGSDEKKA---ENKK-RVVIYENIDG-------------LRKWQRINSLV 221
Query: 231 IATGCKDGKLRIFKVTESRXXXXXXXXXXXXXXXXXXRDGPPIDSSAIDADGSVANLHVE 290
C L+ ++ ++ ++ +A+ ++
Sbjct: 222 FDLPCPITDLKFSPISMVDSHQLAVASGDVHVYNIKVARSAILEEDGVENPIQLADYNLI 281
Query: 291 LISEHSDHQGEVWSVSWNLTGTILSSTGDDGKIRLWKASYSNEF 334
++ DH+ + W + +NL G+++SST DG +R WK+ + N++
Sbjct: 282 KVALLGDHR-KAWRLRYNLMGSVISSTSLDGTLRSWKSLFVNQW 324
>7300991 [U] KOG1332 Vesicle coat complex COPII subunit SEC13
Length = 356
Score = 129 bits (324), Expect = 6e-30
Identities = 96/345 (27%), Positives = 148/345 (42%), Gaps = 74/345 (21%)
Query: 6 TGHSDLVHDISYDFYGRRVATCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVSLDWAA 65
T H D+VH + DFYG +ATCSSD +++F K N L+E K H + + WA
Sbjct: 10 TEHEDMVHHAALDFYGLLLATCSSDGSVRIFHSRK--NNKALAE-LKGHQGPVWQVAWAH 66
Query: 66 PEFGRIIASVSYDKTIKLWEEDPDALELSGKRWQKLCTLNDATGPLFSVKFAPSHLGLRL 125
P+FG I+AS SYD+ + +W+ + + W KL ++ + SV FAPS GL L
Sbjct: 67 PKFGNILASCSYDRKVIVWK------STTPRDWTKLYEYSNHDSSVNSVDFAPSEYGLVL 120
Query: 126 AALGNDGKLRLYDALESSDLRSWTLTSEITVLNTP--PASHLQSDFCLSWCPSR------ 177
A +DG + + T +E V + P +H +SWCP++
Sbjct: 121 ACASSDGSVSVL-----------TCNTEYGVWDAKKIPNAHTIGVNAISWCPAQAPDPAF 169
Query: 178 --------FSTERLVISAMDQATIYQRNKQGKLVPAGHLKGHTGLIRSIAWAPSVGRWYQ 229
+ +RLV D R + V L+ H+ +R +AWAPS+G
Sbjct: 170 DQRVTSRSAAVKRLVSGGCDNLVKIWREDNDRWVEEHRLEAHSDWVRDVAWAPSIGLPRS 229
Query: 230 LIATGCKDGKLRIFKVTESRXXXXXXXXXXXXXXXXXXRDGPPIDSSAIDADGSVANLHV 289
IAT +D + ++ S+A ++ + LH
Sbjct: 230 QIATASQDRHVIVW------------------------------SSNADLSEWTSTVLHT 259
Query: 290 ELISEHSDHQGEVWSVSWNLTGTILSSTGDDGKIRLWKASYSNEF 334
VWS+SW+ TG IL+ TG D + LWK + ++
Sbjct: 260 --------FDDAVWSISWSTTGNILAVTGGDNNVTLWKENTEGQW 296
>At3g01340 [U] KOG1332 Vesicle coat complex COPII subunit SEC13
Length = 302
Score = 121 bits (303), Expect = 2e-27
Identities = 94/351 (26%), Positives = 150/351 (41%), Gaps = 72/351 (20%)
Query: 6 TGHSDLVHDISYDFYGRRVATCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVSLDWAA 65
TGHSD +HD+ D+YG+RVAT SSD IK+ + L+ + H + + WA
Sbjct: 8 TGHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLA-TLTGHRGPVWQVAWAH 66
Query: 66 PEFGRIIASVSYDKTIKLWEEDPDALELSGKRWQKLCTLNDATGPLFSVKFAPSHLGLRL 125
P+FG ++AS SYD I LW+E + +W + D + S+ +AP LGL L
Sbjct: 67 PKFGSLLASCSYDGQIILWKEG------NQNQWTQAHVFTDHKVSVNSIAWAPHELGLSL 120
Query: 126 AALGNDGKLRLYDALESSDLRSWTLTSEITVLNTPPASHLQSDFCLSWCPSRFSTERLVI 185
A +DG + ++ A W T +H +SW P+ LV
Sbjct: 121 ACGASDGNISVFSARADG---GWDTTK-------IDQAHPVGVTSVSWAPAT-EPGALVS 169
Query: 186 SAMDQATIYQ---------------RNKQGKLVPAGHLKGHTGLIRSIAWAPSVGRWYQL 230
S M +Y+ N K+ L HT +R +AWAP++G
Sbjct: 170 SGMID-PVYKLASGGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKST 228
Query: 231 IATGCKDGKLRIFKVTESRXXXXXXXXXXXXXXXXXXRDGPPIDSSAIDADGSVANLHVE 290
IA+G +DGK+ I+ + ++G + + +
Sbjct: 229 IASGSEDGKVIIWTI---------------------GKEGEQWEGTVL------------ 255
Query: 291 LISEHSDHQGEVWSVSWNLTGTILSSTGDDGKIRLWKASYSNEFRCMSVVQ 341
D + VW VSW+LTG +L+ + + + +WK S E+ ++VV+
Sbjct: 256 -----KDFKTPVWRVSWSLTGNLLAVSDGNNNVTVWKESVDGEWEQVTVVE 301
>Hs13491164 [U] KOG1332 Vesicle coat complex COPII subunit SEC13
Length = 322
Score = 120 bits (302), Expect = 2e-27
Identities = 93/350 (26%), Positives = 150/350 (42%), Gaps = 71/350 (20%)
Query: 6 TGHSDLVHDISYDFYGRRVATCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVSLDWAA 65
T H D++HD D+YG R+ATCSSD+ +K+F D L + H+ + + WA
Sbjct: 10 TSHEDMIHDAQMDYYGTRLATCSSDRSVKIF--DVRNGGQILIADLRGHEGPVWQVAWAH 67
Query: 66 PEFGRIIASVSYDKTIKLWEEDPDALELSGKRWQKLCTLNDATGPLFSVKFAPSHLGLRL 125
P +G I+AS SYD+ + +W E+ E S + ++N SV +AP GL L
Sbjct: 68 PMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVN-------SVCWAPHDYGLIL 120
Query: 126 AALGNDGKLRLYDALESSDLRSWTLTSEITVLNTPPASHLQSDFCLSWCPSRFS------ 179
A +DG + L L + W E+ +N +H +SW P+
Sbjct: 121 ACGSSDGAISL---LTYTGEGQW----EVKKINN---AHTIGCNAVSWAPAVVPGSLIDH 170
Query: 180 --------TERLVISAMDQ-ATIYQRNKQGKLVPAGHLKGHTGLIRSIAWAPSVGRWYQL 230
+R D +++ + G+ L+ H+ +R +AWAPS+G
Sbjct: 171 PSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTST 230
Query: 231 IATGCKDGKLRIFKVTESRXXXXXXXXXXXXXXXXXXRDGPPIDSSAIDADGSVANLHVE 290
IA+ +DG++ I+ D S +
Sbjct: 231 IASCSQDGRVFIWTCD----------------------------------DASSNTWSPK 256
Query: 291 LISEHSDHQGEVWSVSWNLTGTILSSTGDDGKIRLWKASYSNEFRCMSVV 340
L+ + +D VW VSW++T IL+ +G D K+ LWK S ++ C+S V
Sbjct: 257 LLHKFND---VVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303
>At2g30050 [U] KOG1332 Vesicle coat complex COPII subunit SEC13
Length = 302
Score = 117 bits (293), Expect = 2e-26
Identities = 89/351 (25%), Positives = 152/351 (42%), Gaps = 72/351 (20%)
Query: 6 TGHSDLVHDISYDFYGRRVATCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVSLDWAA 65
TGH D+VHD+ D+YG+R+AT SSD IK+ + +L+ + H + + WA
Sbjct: 8 TGHEDIVHDVQMDYYGKRIATASSDCTIKITGVSNNGGSQQLA-TLTGHRGPVWEVAWAH 66
Query: 66 PEFGRIIASVSYDKTIKLWEEDPDALELSGKRWQKLCTLNDATGPLFSVKFAPSHLGLRL 125
P++G I+AS SYD + LW+E + +W + D + S+ +AP +GL L
Sbjct: 67 PKYGSILASCSYDGQVILWKEG------NQNQWTQDHVFTDHKSSVNSIAWAPHDIGLSL 120
Query: 126 AALGNDGKLRLYDALESSDLRSWTLTSEITVLNTPPASHLQSDFCLSWCPSRFSTERLVI 185
A +DG + ++ A W TS I +H +SW P+ + ++
Sbjct: 121 ACGSSDGNISVFTARADG---GWD-TSRI------DQAHPVGVTSVSWAPA--TAPGALV 168
Query: 186 SAMDQATIYQ---------------RNKQGKLVPAGHLKGHTGLIRSIAWAPSVGRWYQL 230
S+ +Y+ N K+ L+ HT +R +AWAP++G
Sbjct: 169 SSGLLDPVYKLASGGCDNTVKVWKLANGSWKMDCFPALQKHTDWVRDVAWAPNLGLPKST 228
Query: 231 IATGCKDGKLRIFKVTESRXXXXXXXXXXXXXXXXXXRDGPPIDSSAIDADGSVANLHVE 290
IA+G +DGK+ I+ V ++G + +
Sbjct: 229 IASGSQDGKVIIWTV---------------------GKEGEQWEGKVL------------ 255
Query: 291 LISEHSDHQGEVWSVSWNLTGTILSSTGDDGKIRLWKASYSNEFRCMSVVQ 341
D VW VSW+LTG +L+ + + + +WK + E+ ++ V+
Sbjct: 256 -----KDFMTPVWRVSWSLTGNLLAVSDGNNNVTVWKEAVDGEWEQVTAVE 301
>SPBC215.15 [U] KOG1332 Vesicle coat complex COPII subunit SEC13
Length = 297
Score = 111 bits (278), Expect = 1e-24
Identities = 93/330 (28%), Positives = 140/330 (42%), Gaps = 56/330 (16%)
Query: 6 TGHSDLVHDISYDFYGRRVATCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVSLDWAA 65
T H D++HD D+YG+R+ATCSSDQ IKVF + E N+ L E+ + H + L WA
Sbjct: 6 TQHDDMIHDAILDYYGKRLATCSSDQTIKVFSI--ENNQQTLLETLRGHSGPVWQLGWAH 63
Query: 66 PEFGRIIASVSYDKTIKLWEEDPDALELSGKRWQKLCTLNDATGPLFSVKFAPSHLGLRL 125
P+FG I+AS SYD + +W E +G W +L + +V +AP G L
Sbjct: 64 PKFGTILASASYDGHVIVWRE-------TGGVWSELMDHTAHQASVNAVSWAPHEYGALL 116
Query: 126 AALGNDGKLRLYDALE--SSDLRSWTLTSE--ITVLNTPPASHLQSDFCLSWCPSRFSTE 181
A +DGK+ + + + S D R +T V +PP+ S + P+ +
Sbjct: 117 ACASSDGKVSVLEFKDDGSCDTRIFTAHEPGCNAVCWSPPS---LSGSVVGQSPAA-GPK 172
Query: 182 RLVISAMDQATIYQRNKQG--KLVPAGHLKGHTGLIRSIAWAPSVGRWYQLIATGCKDGK 239
+L + D G + L GH R +AWAPSVG +A+ +D
Sbjct: 173 KLATAGCDNLVKIWAFDAGVNNWILEDTLAGHVDWTRDVAWAPSVGLTKTYLASASQDKN 232
Query: 240 LRIFKVTESRXXXXXXXXXXXXXXXXXXRDGPPIDSSAIDADGSVANLHVELISEHSDHQ 299
+ I+ DGP + +
Sbjct: 233 VFIW---------------------TKEGDGPWQKTPLTE----------------EKFP 255
Query: 300 GEVWSVSWNLTGTILSSTGDDGKIRLWKAS 329
W VSW+L+G IL+ + D K+ L+K S
Sbjct: 256 DIAWRVSWSLSGNILAVSCGDNKVYLFKES 285
>YLR208w [U] KOG1332 Vesicle coat complex COPII subunit SEC13
Length = 297
Score = 106 bits (264), Expect = 6e-23
Identities = 67/229 (29%), Positives = 116/229 (50%), Gaps = 32/229 (13%)
Query: 8 HSDLVHDISYDFYGRRVATCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVSLDWAAPE 67
H++L+HD D+YG+R+ATCSSD+ IK+F+++ ET+ +L ++ H+ + +DWA P+
Sbjct: 8 HNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH--KLIDTLTGHEGPVWRVDWAHPK 65
Query: 68 FGRIIASVSYDKTIKLWEEDPDALELSGKRWQKLCTLNDATGPLFSVKFAPSHLGLRLAA 127
FG I+AS SYD + +W+E+ RW ++ + + SV++AP G L
Sbjct: 66 FGTILASCSYDGKVLIWKEE-------NGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLV 118
Query: 128 LGNDGKLRLYDALESSDLRSWTLTSEITVLNTPPASHLQSDFCLSWCPSRF--------- 178
+DGK+ + + E+ TS I + +H SW P+
Sbjct: 119 ASSDGKVSVVEFKENG------TTSPIII-----DAHAIGVNSASWAPATIEEDGEHNGT 167
Query: 179 -STERLVISAMDQ-ATIYQRNKQGK-LVPAGHLKGHTGLIRSIAWAPSV 224
+ + V D I++ N + V L+GH+ +R +AW+P+V
Sbjct: 168 KESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV 216
>At1g64350 [YU] KOG2445 Nuclear pore complex component (sc Seh1)
Length = 594
Score = 99.4 bits (246), Expect = 7e-21
Identities = 79/336 (23%), Positives = 159/336 (46%), Gaps = 57/336 (16%)
Query: 16 SYDFYGRRVATCSSDQHIKVFKLDKETNE-WELSESWKAHDSSIVSLDWAAPEFGRIIAS 74
S++ G R+A S + + +++ ++ + + + +SSIV + W E+G +A
Sbjct: 16 SWNQSGDRLAAGSLNGKLSIYESSTSSSSTFSCTSKVRVSESSIVKIVWLPSEYGDAVAC 75
Query: 75 VSYDKTIKLWEEDPDALELSGKRWQKLCTLNDATGPLFSVKFAPSHLGLRLAALGNDGKL 134
V D ++ +WEE + + G W+ ++ + + + V+F S L++ A +DG L
Sbjct: 76 VCEDGSLSIWEELSE--DAHGLEWKLCKSMKNKSSQVLDVQFGVSRKSLKMVAAYSDGYL 133
Query: 135 RLYDALESSDLRSWTLTSE----ITVLNT--PPASHLQSDFCLSWCPSRFSTER----LV 184
R+++ L +L++W L +E I L+T P+S S +SW P + + L
Sbjct: 134 RVFELLNPLELKNWQLQAEFQNVIDSLSTLGKPSSLSAS---VSWNPMKGEEQEPSFVLA 190
Query: 185 ISA----MDQATIYQ----RNKQGKLVPAGHLKGHTGLIRSIAWAPSVGRWYQLIATGCK 236
++ ++ + I++ N+ + + + +++WAP++GR Y+++A
Sbjct: 191 FNSDSPHLNSSKIWEFDEAHNRWLAVAELALPEDKGDPVYALSWAPNIGRPYEVVAVATH 250
Query: 237 DGKLRIFKVTESRXXXXXXXXXXXXXXXXXXRDGPPIDSSAIDADGSVANLHVELISEHS 296
G + I+ V A D +G L V+ +S S
Sbjct: 251 KG-IGIWHV-----------------------------GLAPDLEG---RLPVKKVSSLS 277
Query: 297 DHQGEVWSVSWNLTGTILSSTGDDGKIRLWKASYSN 332
HQGEVW + W+++G L+STG DG ++LW+++ ++
Sbjct: 278 GHQGEVWQMEWDMSGMTLASTGSDGMVKLWQSNLND 313
>CE25614 [U] KOG1332 Vesicle coat complex COPII subunit SEC13
Length = 313
Score = 95.9 bits (237), Expect = 8e-20
Identities = 70/253 (27%), Positives = 108/253 (42%), Gaps = 36/253 (14%)
Query: 6 TGHSDLVHDISYDFYGRRVATCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVSLDWAA 65
T H D +HD + YG R+ATC SD+ +K+F++ + ++E H + + WA
Sbjct: 10 TQHRDAIHDAQLNIYGSRLATCGSDRLVKIFEVRPNGQSYPMAE-LVGHSGPVWKVSWAH 68
Query: 66 PEFGRIIASVSYDKTIKLWEEDPDALELSGKRWQKLCTLNDATGPLFSVKFAPSHLGLRL 125
P++G ++AS SYDK + +W E RWQK V FAP GL L
Sbjct: 69 PKYGGLLASASYDKKVIIWNEQQG-------RWQKAYEWAAHEASTTCVAFAPHQYGLML 121
Query: 126 AALGNDGKLRLYDALESSDLRSWTLTSEITVLNTPPASHLQSDFCLSWCP---------- 175
A+ DG + + SS+ W ++S+I H Q + W P
Sbjct: 122 ASASADGDIGILRYDNSSN--EW-ISSKI------QKCHEQGVNSVCWAPGSADPAAKKR 172
Query: 176 --SRFSTERLVISAMDQATIYQRNKQGKLVPAGHLKGHTGLIRSIAWAPSVGRWYQLIAT 233
S + + + I A D AT + + L GHT +R AW P I +
Sbjct: 173 LVSAGNDKNVKIWAFDDAT-------NEWILEKTLAGHTDFVREAAWCPVTNNGQHTIVS 225
Query: 234 GCKDGKLRIFKVT 246
+G L +F+ +
Sbjct: 226 CGMEGNLVLFRTS 238
>CE25615 [U] KOG1332 Vesicle coat complex COPII subunit SEC13
Length = 211
Score = 82.8 bits (203), Expect = 7e-16
Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 6 TGHSDLVHDISYDFYGRRVATCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVSLDWAA 65
T H D +HD + YG R+ATC SD+ +K+F++ + ++E H + + WA
Sbjct: 10 TQHRDAIHDAQLNIYGSRLATCGSDRLVKIFEVRPNGQSYPMAE-LVGHSGPVWKVSWAH 68
Query: 66 PEFGRIIASVSYDKTIKLWEEDPDALELSGKRWQKLCTLNDATGPLFSVKFAPSHLGLRL 125
P++G ++AS SYDK + +W E RWQK V FAP GL L
Sbjct: 69 PKYGGLLASASYDKKVIIWNEQQG-------RWQKAYEWAAHEASTTCVAFAPHQYGLML 121
Query: 126 AALGNDGKL 134
A+ DG +
Sbjct: 122 ASASADGDI 130
>Hs4757988 [R] KOG0645 WD40 repeat protein
Length = 339
Score = 65.9 bits (159), Expect = 8e-11
Identities = 66/257 (25%), Positives = 117/257 (44%), Gaps = 42/257 (16%)
Query: 5 LTGHSDLVHDISYDFYGRRVATCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVSLDWA 64
L GH + V +++ G +ATCS D+ + V+++D+E +E+E +H + + W
Sbjct: 101 LEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEE-DEYECVSVLNSHTQDVKHVVWH 159
Query: 65 APEFGRIIASVSYDKTIKLWEEDPDALELSGKRWQKLCTLNDATGPLFSVKFAPSHLGLR 124
+ ++AS SYD T+KL+ E+ D W TL ++S+ F PS G R
Sbjct: 160 PSQ--ELLASASYDDTVKLYREEED-------DWVCCATLEGHESTVWSLAFDPS--GQR 208
Query: 125 LAALGNDGKLRLYD----------ALESSDLRSWTLTSEITVLNTPPASHLQSDFCLSWC 174
LA+ +D +R++ A SD SW + T H ++ + ++WC
Sbjct: 209 LASCSDDRTVRIWRQYLPGNEQGVACSGSD-PSW------KCICTLSGFHSRTIYDIAWC 261
Query: 175 PSRFSTERLVISAMDQA-TIYQRN-----KQGKLVPAGHL-KGHTGLIRSIAWAPSVGRW 227
T L + D A ++Q + +Q HL + H+ + +AW P +
Sbjct: 262 Q---LTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNP---KE 315
Query: 228 YQLIATGCKDGKLRIFK 244
L+A+ DG++ +K
Sbjct: 316 PGLLASCSDDGEVAFWK 332
Score = 54.7 bits (130), Expect = 2e-07
Identities = 69/302 (22%), Positives = 123/302 (39%), Gaps = 57/302 (18%)
Query: 21 GRRVATCSSDQHIKVFKLDKETNEWEL-SESWKAHDSSIVSLDWAAPEFGRIIASVSYDK 79
G +A+C D+ I+++ E + W S + H ++ + W+ G +AS S+D
Sbjct: 28 GTLLASCGGDRRIRIW--GTEGDSWICKSVLSEGHQRTVRKVAWSP--CGNYLASASFDA 83
Query: 80 TIKLWEEDPDALELSGKRWQKLCTLNDATGPLFSVKFAPSHLGLRLAALGNDGKLRLYDA 139
T +W+++ D E + TL + SV +APS G LA D + +++
Sbjct: 84 TTCIWKKNQDDFEC-------VTTLEGHENEVKSVAWAPS--GNLLATCSRDKSVWVWEV 134
Query: 140 LESSDLRSWTLTSEITVLNTPPASHLQSDFCLSWCPSRFSTERLVISAMDQATIYQRNKQ 199
E + ++VLN SH Q + W PS+ E L ++ D R ++
Sbjct: 135 DEEDEYEC------VSVLN----SHTQDVKHVVWHPSQ---ELLASASYDDTVKLYREEE 181
Query: 200 GKLVPAGHLKGHTGLIRSIAWAPSVGRWYQLIATGCKDGKLRIFKVTESRXXXXXXXXXX 259
V L+GH + S+A+ PS Q +A+ D +RI+
Sbjct: 182 DDWVCCATLEGHESTVWSLAFDPS----GQRLASCSDDRTVRIW---------------- 221
Query: 260 XXXXXXXXRDGPPIDSSAIDADGSVANLHVELISEHSDHQGEVWSVSW-NLTGTILSSTG 318
R P + + GS + + + H ++ ++W LTG + ++ G
Sbjct: 222 --------RQYLPGNEQGVACSGSDPSWKC-ICTLSGFHSRTIYDIAWCQLTGALATACG 272
Query: 319 DD 320
DD
Sbjct: 273 DD 274
>7303130 [R] KOG0645 WD40 repeat protein
Length = 335
Score = 65.9 bits (159), Expect = 8e-11
Identities = 63/254 (24%), Positives = 111/254 (42%), Gaps = 28/254 (11%)
Query: 5 LTGHSDLVHDISYDFYGRRVATCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVSLDWA 64
L GH + V +S+ G +ATCS D+ + ++++ + +E+E + H + + W
Sbjct: 99 LEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGD-DEFECAAVLNPHTQDVKRVVWH 157
Query: 65 APEFGRIIASVSYDKTIKLWEEDPDALELSGKRWQKLCTLNDATGPLFSVKFAPSHLGLR 124
+ I+AS SYD TIK++ E+P W TL T ++ + F G R
Sbjct: 158 PTK--DILASASYDNTIKMFAEEP-----IDNDWDCTATLTSHTSTVWGIDFDAD--GER 208
Query: 125 LAALGNDGKLRLYDALESSDLRSWTLTSEITV---LNTPPASHLQSDFCLSWCPSRFSTE 181
L + +D ++++ A + + TV + T H ++ + +SWC
Sbjct: 209 LVSCSDDTTIKIWRAYHPGNTAGVATPDQQTVWKCVCTVSGQHSRAIYDVSWC----KLT 264
Query: 182 RLVISAM--DQATIYQRNKQGKLVP------AGHLKGHTGLIRSIAWAPSVGRWYQLIAT 233
L+ +A D I++ + K H + S+ W P V QLI+
Sbjct: 265 GLIATACGDDGIRIFKESSDSKPDEPTFEQITAEEGAHDQDVNSVQWNPVVAG--QLISC 322
Query: 234 GCKDGKLRIFKVTE 247
DG ++I+KVTE
Sbjct: 323 S-DDGTIKIWKVTE 335
Score = 61.6 bits (148), Expect = 2e-09
Identities = 78/339 (23%), Positives = 135/339 (39%), Gaps = 77/339 (22%)
Query: 7 GHSDLVHDISYDFYGRRVATCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVSLDWAAP 66
GH + +I + G+ +A+ S D ++ K + E+E + + + H++ + S+ W+
Sbjct: 57 GHKRTIREIRWSPCGQYLASASFDATTAIWS--KSSGEFECNATLEGHENEVKSVSWS-- 112
Query: 67 EFGRIIASVSYDKTIKLWEEDPDALELSGKRWQKLCTLNDATGPLFSVKFAPSHLGLRLA 126
G ++A+ S DK++ +WE D ++ LN T + V + P+ L A
Sbjct: 113 RSGGLLATCSRDKSVWIWEVAGD------DEFECAAVLNPHTQDVKRVVWHPTKDILASA 166
Query: 127 ALGNDGKLRLYDALESSDLRSWTLTSEITVLNTPPASHLQSDFCLSWCPSRFSTERLVIS 186
+ N K+ + +++ W T+ +T SH + + + + ERLV S
Sbjct: 167 SYDNTIKMFAEEPIDN----DWDCTATLT-------SHTSTVWGIDF---DADGERLV-S 211
Query: 187 AMDQATI------YQRNKQGKLVPAGH--------LKG-HTGLIRSIAWAPSVGRWYQLI 231
D TI + N G P + G H+ I ++W G LI
Sbjct: 212 CSDDTTIKIWRAYHPGNTAGVATPDQQTVWKCVCTVSGQHSRAIYDVSWCKLTG----LI 267
Query: 232 ATGCKDGKLRIFKVTESRXXXXXXXXXXXXXXXXXXRDGPPIDSSAIDADGSVANLHVEL 291
AT C D +RIFK + D P + ++
Sbjct: 268 ATACGDDGIRIFKESSD-----------------SKPDEPTFE---------------QI 295
Query: 292 ISEHSDHQGEVWSVSWN-LTGTILSSTGDDGKIRLWKAS 329
+E H +V SV WN + L S DDG I++WK +
Sbjct: 296 TAEEGAHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKVT 334
Score = 50.4 bits (119), Expect = 4e-06
Identities = 36/147 (24%), Positives = 68/147 (45%), Gaps = 10/147 (6%)
Query: 200 GKLVPAGHLKGHTGLIRSIAWAPSVGRWYQLIATGCKDGKLRIFKVTESRXXXXXXXXXX 259
G+L+ L+GH G I +AW P + A+ +D +RI+ +T +
Sbjct: 2 GRLILEHTLQGHKGRIWGVAWHPKGN----VFASCGEDKAIRIWSLTGNTWSTKTILSDG 57
Query: 260 XXXXXXXXRDGPP---IDSSAIDADGSV---ANLHVELISEHSDHQGEVWSVSWNLTGTI 313
R P + S++ DA ++ ++ E + H+ EV SVSW+ +G +
Sbjct: 58 HKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGL 117
Query: 314 LSSTGDDGKIRLWKASYSNEFRCMSVV 340
L++ D + +W+ + +EF C +V+
Sbjct: 118 LATCSRDKSVWIWEVAGDDEFECAAVL 144
>YCR072c [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 515
Score = 60.8 bits (146), Expect = 3e-09
Identities = 74/362 (20%), Positives = 137/362 (37%), Gaps = 70/362 (19%)
Query: 5 LTGHSDLVHDISYDFYGRRVATCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVSLDW- 63
L GH + V +S+ G +AT S D I+++ D ++ + L ++ + H I SL W
Sbjct: 182 LKGHYNWVLCVSWSPDGEVIATGSMDNTIRLW--DPKSGQC-LGDALRGHSKWITSLSWE 238
Query: 64 ----AAPEFGRIIASVSYDKTIKLWEEDPDALELSGKRWQKLCTLNDATGPLFSVKFAPS 119
P +AS S D TIK+W+ + T++ T + VK+
Sbjct: 239 PIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQY---------TMSGHTNSVSCVKWG-- 287
Query: 120 HLGLRLAALGNDGKLRLYDALESSDLRSWTLTSEITVLNTPPAS-------HLQSDFCL- 171
G+ LY +R W + S+ +N + L +D+ L
Sbjct: 288 ------------GQGLLYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTDYALR 335
Query: 172 --------------------------SWCPSRFSTERLVISAMDQATIYQRNKQGKLVPA 205
C ++E ++++A D T++ N P
Sbjct: 336 IGAFDHTGKKPSTPEEAQKKALENYEKICKKNGNSEEMMVTASDDYTMFLWNPLKSTKPI 395
Query: 206 GHLKGHTGLIRSIAWAPSVGRWYQLIATGCKDGKLRIFKVTESRXXXXXXXXXXXXXXXX 265
+ GH L+ +A++P GR+ I + D ++++ + +
Sbjct: 396 ARMTGHQKLVNHVAFSPD-GRY---IVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVA 451
Query: 266 XXRDGPPIDSSAIDADGSVANLHVELIS-EHSDHQGEVWSVSWNLTGTILSSTGDDGKIR 324
D + S + D V ++ +S + H+ EV++V W++ G + S G D +R
Sbjct: 452 WSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKMVR 511
Query: 325 LW 326
LW
Sbjct: 512 LW 513
>YDR267c [R] KOG0645 WD40 repeat protein
Length = 330
Score = 60.5 bits (145), Expect = 4e-09
Identities = 38/171 (22%), Positives = 80/171 (46%), Gaps = 17/171 (9%)
Query: 5 LTGHSDLVHDISYDFYGRRVATCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVSLDWA 64
+ GH + V +++ G +ATCS D+ + +++ D+ E+E + H + + W
Sbjct: 103 IEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWH 162
Query: 65 APEFGRIIASVSYDKTIKLWEEDPDALELSGKRWQKLCTLNDATGPLFSVKFAPSHLGLR 124
E ++AS SYD T+++W++ D W+ + LN G ++S F + R
Sbjct: 163 PSE--ALLASSSYDDTVRIWKDYDD-------DWECVAVLNGHEGTVWSSDFDKTEGVFR 213
Query: 125 LAALGNDGKLRLYDAL--ESSDLRSWTLTSEITVLNTPPASHLQSDFCLSW 173
L + +D +R++ + + D + W + + P H + + ++W
Sbjct: 214 LCSGSDDSTVRVWKYMGDDEDDQQEWVCEAIL------PDVHKRQVYNVAW 258
>SPAC806.02c_2 [R] KOG0645 WD40 repeat protein
Length = 322
Score = 59.3 bits (142), Expect = 8e-09
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 35/208 (16%)
Query: 5 LTGHSDLVHDISYDFYGRRVATCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVSLDWA 64
L GH + V I++ G +ATCS D+ + +++ E +E++ + H + + W
Sbjct: 88 LEGHENEVKCIAWSCNGNYLATCSRDKSVWIWEA-TEDDEFDCLAVLQEHTQDVKVVTWH 146
Query: 65 APEFGRIIASVSYDKTIKLWEEDPDALELSGKRWQKLCTLNDATGPLFSVKFAPSHLGLR 124
E ++ S SYD +I W +D G W C L T ++++ F+P+ G
Sbjct: 147 PTE--DLLVSGSYDNSICFWRDD-------GDDWALTCQLQGHTNTVWALAFSPN--GNT 195
Query: 125 LAALGNDGKLRLY---------DALESSDLRSWTLTSEITVLNTPPASHLQSDFCLSWCP 175
LA+ NDG + L+ ++S+++ L E + P H + + +SW
Sbjct: 196 LASADNDGNVFLWIKISSNEDVATIDSTNILRPALQEEWKQQTSLPHIHKGAVYTISW-- 253
Query: 176 SRFSTERLVISAMDQATIYQRNKQGKLV 203
M+ AT+ GK+V
Sbjct: 254 ------------MNDATLCSAGGDGKIV 269
>Hs13376840 [R] KOG4155 FOG: WD40 repeat
Length = 305
Score = 58.5 bits (140), Expect = 1e-08
Identities = 78/308 (25%), Positives = 130/308 (41%), Gaps = 46/308 (14%)
Query: 24 VATCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVSLDWAAPEFGRIIASVSYDKTIKL 83
V T S D +KV+K E +L S + H +VS+D + I AS S D I+L
Sbjct: 35 VVTGSLDDLVKVWKWRDE--RLDLQWSLEGHQLGVVSVDISHTL--PIAASSSLDAHIRL 90
Query: 84 WEEDPDALELSGKRWQKLCTLNDATGPLFSVKFAPSHLGLRLAALGNDGKLRLYDALESS 143
W+ + +GK+ + + DA GP+ + A S LA + GK+ ++ S
Sbjct: 91 WDLE------NGKQIKSI----DA-GPVDAWTLAFSPDSQYLATGTHVGKVNIFGV--ES 137
Query: 144 DLRSWTLTSE----ITVLNTPPASHLQSDFCLSWCPSRFSTERLVISAMDQATIYQRNKQ 199
+ ++L + +++ +P +L S +I+ D AT
Sbjct: 138 GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG-----------IINIFDIAT------- 179
Query: 200 GKLVPAGHLKGHTGLIRSIAWAPSVGRWYQLIATGCKDGKLRIFKVTESRXXXXXXXXXX 259
GKL+ L+GH IRS+ ++P QL+ T DG ++I+ V +
Sbjct: 180 GKLLHT--LEGHAMPIRSLTFSPDS----QLLVTASDDGYIKIYDVQHANLAGTLSGHAS 233
Query: 260 XXXXXXXXRDGPPIDSSAIDADGSVANLHVEL-ISEHSDHQGEVWSVSWNLTGTILSSTG 318
D SS+ D V ++ + DHQ +VW V +N G+ + S G
Sbjct: 234 WVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVG 293
Query: 319 DDGKIRLW 326
DD +I ++
Sbjct: 294 DDQEIHIY 301
>7299285 [R] KOG4155 FOG: WD40 repeat
Length = 331
Score = 58.2 bits (139), Expect = 2e-08
Identities = 70/309 (22%), Positives = 132/309 (42%), Gaps = 46/309 (14%)
Query: 24 VATCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVSLDWAAPEFGRIIASVSYDKTIKL 83
+ T D +KV+ L +E N +L K H +VS+ A G+ IAS S D T+ L
Sbjct: 55 LVTGGLDDLVKVWDL-QEDNTLKLRHKLKGHALGVVSV--AVSSDGQTIASSSLDSTMCL 111
Query: 84 WEEDPDALELSGKRWQKLCTLNDATGPLFSVKFAPSHLGLRLAALGNDGKLRLYD----- 138
W+ + K L+ L++V+F+P + + ++ L NDGK+ +Y
Sbjct: 112 WD---------ARSGDKKHLLSFGPVDLWTVQFSPCNKYV-ISGL-NDGKISMYSVETGK 160
Query: 139 ALESSDLRSWTLTSEITVLNTPPASHLQSDFCLSWCPSRFSTERLVISAMDQATIYQRNK 198
A ++ D ++ T +++ +P ++ S +I+ D A
Sbjct: 161 AEQTLDAQNGKYT--LSIAYSPDGKYIASGAIDG-----------IITIFDVAA------ 201
Query: 199 QGKLVPAGHLKGHTGLIRSIAWAPSVGRWYQLIATGCKDGKLRIFKVTESRXXXXXXXXX 258
GK+V L+GH +RS+ ++P+ QL+ T DG ++++ VT S
Sbjct: 202 -GKVVQT--LEGHAMPVRSLCFSPN----SQLLLTASDDGHMKLYDVTHSDVVGTLSGHA 254
Query: 259 XXXXXXXXXRDGPPIDSSAIDADGSVANL-HVELISEHSDHQGEVWSVSWNLTGTILSST 317
DG SS+ D + + + + ++H +VW V ++ ++S
Sbjct: 255 SWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLHTFAEHTDQVWGVRYSPGNDKVASA 314
Query: 318 GDDGKIRLW 326
+D + ++
Sbjct: 315 SEDKSLNIY 323
>7296187 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 481
Score = 58.2 bits (139), Expect = 2e-08
Identities = 73/337 (21%), Positives = 133/337 (38%), Gaps = 65/337 (19%)
Query: 5 LTGHSDLVHDISYDFYGR-----RVATCSSDQHIKVFKLDKETNEWELSESWKAHDSSIV 59
L+GH ++ ++++ Y R ++A+ S D +++ + + + H +++
Sbjct: 193 LSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIW----DVKLGQCLMNIAGHTNAVT 248
Query: 60 SLDWAAPEFGRIIASVSYDKTIKLWEEDPDAL--ELSGK-RWQKLCTLND----ATGPLF 112
++ W +I + S D+T+K+W L SG W L+ TGP
Sbjct: 249 AVRWGG---AGLIYTSSKDRTVKMWRAADGILCRTFSGHAHWVNNIALSTDYVLRTGPFH 305
Query: 113 SVKF-APSHLGLRLAALGNDGKLRLYDALESSDLRSWTLTSEITVLNTPPASHLQSDFCL 171
VK + SHL L L + L+ Y A+
Sbjct: 306 PVKDRSKSHLSLSTEEL-QESALKRYQAV------------------------------- 333
Query: 172 SWCPSRFSTERLVISAMDQATIYQ-RNKQGKLVPAGHLKGHTGLIRSIAWAPSVGRWYQL 230
CP + ++S D T+Y RN Q K V + GH ++ + ++P V +L
Sbjct: 334 --CPDEVES---LVSCSDDNTLYLWRNNQNKCVE--RMTGHQNVVNDVKYSPDV----KL 382
Query: 231 IATGCKDGKLRIFKVTESRXXXXXXXXXXXXXXXXXXRDGPPIDSSAIDADGSVANLHVE 290
IA+ D +R+++ ++ + D I S + D+ V ++ +
Sbjct: 383 IASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTK 442
Query: 291 -LISEHSDHQGEVWSVSWNLTGTILSSTGDDGKIRLW 326
L E H EV+ V W G+ ++S G D I+LW
Sbjct: 443 KLAQELPGHADEVFGVDWAPDGSRVASGGKDKVIKLW 479
>Hs4557741 [S] KOG0295 WD40 repeat-containing protein
Length = 410
Score = 57.8 bits (138), Expect = 2e-08
Identities = 54/203 (26%), Positives = 86/203 (41%), Gaps = 42/203 (20%)
Query: 5 LTGHSDLVHDISYDFYGRRVATCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVSLDWA 64
L GH+D V DIS+D G+ +A+CS+D IK++ + +E + HD ++ S+ A
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLW----DFQGFECIRTMHGHDHNVSSV--A 199
Query: 65 APEFGRIIASVSYDKTIKLWEEDPD--ALELSGKR-WQKLCTLNDATGPLFSVKFAPSHL 121
G I S S DKTIK+WE +G R W ++ P+
Sbjct: 200 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRM--------------VRPNQD 245
Query: 122 GLRLAALGNDGKLRLYDALESSDLRSWTLTSEITVLNTPPASHLQSDFCLSWCPSRFSTE 181
G +A+ ND +R+ W + ++ H+ C+SW P
Sbjct: 246 GTLIASCSNDQTVRV-----------WVVATKECKAELREHEHVVE--CISWAPES---- 288
Query: 182 RLVISAMDQATIYQRNKQGKLVP 204
S++ +AT + K GK P
Sbjct: 289 --SYSSISEATGSETKKSGKPGP 309
>At5g67320 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 613
Score = 57.4 bits (137), Expect = 3e-08
Identities = 40/151 (26%), Positives = 73/151 (47%), Gaps = 22/151 (14%)
Query: 6 TGHSDLVHDISYDFYGRRVATCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVSLDWAA 65
TGH V+ + +D G +A+CS D K++ + + T +L E H I ++ W+
Sbjct: 445 TGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLRE----HTKEIYTIRWSP 500
Query: 66 -------PEFGRIIASVSYDKTIKLWEEDPDALELSGKRWQKLCTLNDATGPLFSVKFAP 118
P +AS S+D T+KLW+ + GK LC+ N P++S+ F+P
Sbjct: 501 TGPGTNNPNKQLTLASASFDSTVKLWDAE------LGK---MLCSFNGHREPVYSLAFSP 551
Query: 119 SHLGLRLAALGNDGKLRLYDALESSDLRSWT 149
+ G +A+ D + ++ E ++++T
Sbjct: 552 N--GEYIASGSLDKSIHIWSIKEGKIVKTYT 580
>Hs4505731 [U] KOG0277 Peroxisomal targeting signal type 2 receptor
Length = 323
Score = 55.8 bits (133), Expect = 9e-08
Identities = 53/215 (24%), Positives = 100/215 (45%), Gaps = 30/215 (13%)
Query: 9 SDLVHDISYDFYGRRVA-TCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVSLDWAAPE 67
+D + D+++ V TCS D ++++ K ++ +K H + S+DW+
Sbjct: 67 NDGLFDVTWSENNEHVLITCSGDGSLQLWDTAKAAGPLQV---YKEHAQEVYSVDWSQTR 123
Query: 68 FGRIIASVSYDKTIKLWEEDPDALELSGKRWQKLCTLNDATGPLFSVKFAPSHLGLRLAA 127
+++ S S+D+T+KLW DP GK LCT ++S ++P H+ A+
Sbjct: 124 GEQLVVSGSWDQTVKLW--DPTV----GK---SLCTFRGHESIIYSTIWSP-HIPGCFAS 173
Query: 128 LGNDGKLRLYDALESSDLRSWTLTSEITVLNTPPASHLQSDFCLSWCPSRFSTERLVISA 187
D LR++D ++++ +R V+ A L D+C +++ LV A
Sbjct: 174 ASGDQTLRIWD-VKAAGVR--------IVIPAHQAEILSCDWC------KYNENLLVTGA 218
Query: 188 MDQATIYQRNKQGKLVPAGHLKGHTGLIRSIAWAP 222
+D ++ + + P L GHT IR + ++P
Sbjct: 219 VD-CSLRGWDLRNVRQPVFELLGHTYAIRRVKFSP 252
>At5g56130 [S] KOG1407 WD40 repeat protein
Length = 315
Score = 55.8 bits (133), Expect = 9e-08
Identities = 65/314 (20%), Positives = 122/314 (38%), Gaps = 36/314 (11%)
Query: 7 GHSDLVHDISYDFYGRRVATCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVSLDWAAP 66
GH VH ++++ G ++A+ S DQ +++ ++ + K H S+ L W P
Sbjct: 18 GHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCW-DP 76
Query: 67 EFGRIIASVSYDKTIKLWEEDPDALELSGKRWQKLCTLNDATGPLFSVKFAPSHLGLRLA 126
+ ++A+ S DK+++LW+ SGK Q++ + +G ++ + P G +A
Sbjct: 77 KHSDLVATASGDKSVRLWD------ARSGKCTQQV----ELSGENINITYKPD--GTHVA 124
Query: 127 ALGNDGKLRLYDALESSDLRSWTLTSEITVLNTPPASHLQSDFCLSWCPSRFSTERLVIS 186
D +L + D + L E+ + A ++ DF +T +
Sbjct: 125 VGNRDDELTILDVRKFKPLHRRKFNYEVNEI----AWNMPGDFFF------LTTGLGTVE 174
Query: 187 AMDQATIYQRNKQGKLVPAGHLKGHTGLIRSIAWAPSVGRWYQLIATGCKDGKLRIFKVT 246
+ + L P L HT IA P GR++ A G D + ++ ++
Sbjct: 175 VLSYPS---------LKPLDTLTAHTAGCYCIAIDPK-GRYF---AVGSADSLVSLWDIS 221
Query: 247 ESRXXXXXXXXXXXXXXXXXXRDGPPIDSSAIDADGSVANLHVELISEHSDHQGEVWSVS 306
+ G I S++ D +AN+ + + SV
Sbjct: 222 DMLCLRTFTKLEWPVRTISFNYSGEYIASASEDLFIDIANVQTGRTVHQIPCRAAMNSVE 281
Query: 307 WNLTGTILSSTGDD 320
WN +L+ GDD
Sbjct: 282 WNPKYNLLAYAGDD 295
>Hs19913371 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 514
Score = 54.7 bits (130), Expect = 2e-07
Identities = 40/155 (25%), Positives = 76/155 (48%), Gaps = 22/155 (14%)
Query: 7 GHSDLVHDISYDFYGRRVATCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVSLDWAA- 65
GH++ V+ I +D G +A+CS D +K++ + ++ +L +AH+ I ++ W+
Sbjct: 347 GHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDL----QAHNKEIYTIKWSPT 402
Query: 66 ------PEFGRIIASVSYDKTIKLWEEDPDALELSGKRWQKLCTLNDATGPLFSVKFAPS 119
P ++AS S+D T++LW+ D R + TL P++SV F+P
Sbjct: 403 GPGTNNPNANLMLASASFDSTVRLWDVD---------RGICIHTLTKHQEPVYSVAFSPD 453
Query: 120 HLGLRLAALGNDGKLRLYDALESSDLRSWTLTSEI 154
G LA+ D + +++ + + S+ T I
Sbjct: 454 --GRYLASGSFDKCVHIWNTQTGALVHSYRGTGGI 486
>7296209 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 700
Score = 54.7 bits (130), Expect = 2e-07
Identities = 39/155 (25%), Positives = 73/155 (46%), Gaps = 22/155 (14%)
Query: 7 GHSDLVHDISYDFYGRRVATCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVSLDWAA- 65
GH++ V+ I + G+ +A+CS D +K++ ++++ +AH I ++ W+
Sbjct: 532 GHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNRD----RCCHDLQAHSKEIYTIKWSPT 587
Query: 66 ------PEFGRIIASVSYDKTIKLWEEDPDALELSGKRWQKLCTLNDATGPLFSVKFAPS 119
P I+AS S+D T++LW+ + R + TL T P++SV F+P
Sbjct: 588 GPGTNNPNTNLILASASFDSTVRLWDVE---------RGSCIHTLTKHTEPVYSVAFSPD 638
Query: 120 HLGLRLAALGNDGKLRLYDALESSDLRSWTLTSEI 154
G LA+ D + ++ + S+ T I
Sbjct: 639 --GKHLASGSFDKCVHIWSTQTGQLVHSYKGTGGI 671
>Hs15150805 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 522
Score = 53.9 bits (128), Expect = 3e-07
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 26/157 (16%)
Query: 7 GHSDLVHDISYDFYGRRVATCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVSLDWAA- 65
GH++ V+ I +D G +A+CS D +K++ + ++ +L +AH I ++ W+
Sbjct: 357 GHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDL----QAHSKEIYTIKWSPT 412
Query: 66 ------PEFGRIIASVSYDKTIKLWEEDPDALELSGKRWQKLC--TLNDATGPLFSVKFA 117
P ++AS S+D T++LW+ + Q +C TL P++SV F+
Sbjct: 413 GPATSNPNSSIMLASASFDSTVRLWDVE-----------QGVCTHTLMKHQEPVYSVAFS 461
Query: 118 PSHLGLRLAALGNDGKLRLYDALESSDLRSWTLTSEI 154
P G LA+ D + +++ S + S+ T I
Sbjct: 462 PD--GKYLASGSFDKYVHIWNTQSGSLVHSYQGTGGI 496
>7302979 [S] KOG0295 WD40 repeat-containing protein
Length = 411
Score = 53.5 bits (127), Expect = 4e-07
Identities = 28/81 (34%), Positives = 48/81 (58%), Gaps = 5/81 (6%)
Query: 5 LTGHSDLVHDISYDFYGRRVATCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVSLDWA 64
L GH+D V D+++D G+ +A+CS+D IK++ + +E ++ HD ++ S+ A
Sbjct: 146 LKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQ---SYECIKTMHGHDHNVSSV--A 200
Query: 65 APEFGRIIASVSYDKTIKLWE 85
G + S S D+TIK+WE
Sbjct: 201 FVPAGDYVLSASRDRTIKMWE 221
>SPAC6B12.15 [T] KOG0279 G protein beta subunit-like protein
Length = 314
Score = 52.4 bits (124), Expect = 1e-06
Identities = 70/284 (24%), Positives = 111/284 (38%), Gaps = 69/284 (24%)
Query: 5 LTGHSDLVHDISYDFYGRRVATCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVSLDWA 64
LTGHS V D + F + S D+ I+++ L+K E + + H S ++S+
Sbjct: 59 LTGHSHFVSDCALSFDSHYALSASWDKTIRLWDLEK----GECTHQFVGHTSDVLSVS-I 113
Query: 65 APEFGRIIASVSYDKTIKLW------------------------EEDPDALELSGKRWQK 100
+P+ R + S S DKTIK+W +PD L W K
Sbjct: 114 SPD-NRQVVSGSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDK 172
Query: 101 LCTLNDA------------TGPLFSVKFAPSHLGLRLAALGNDGKLRLYDALESSDLRSW 148
+ D TG + +V +P G A+ G DG L L+D ES+ L S
Sbjct: 173 AVKVWDLETFSLRTSHYGHTGYVSAVTISPD--GSLCASGGRDGTLMLWDLNESTHLYSL 230
Query: 149 TLTSEITVLNTPPASHLQSDFCLSW-CPSRFSTERL----VISAMDQATIYQRNKQGKLV 203
+ I L P + W C + S+ R+ +D+ T+ V
Sbjct: 231 EAKANINALVFSPNRY--------WLCAATGSSIRIFDLETQEKVDELTV-------DFV 275
Query: 204 PAGHLKGHTGLIRSIAWAPSVGRWYQLIATGCKDGKLRIFKVTE 247
G I S+ W+P Q + +G D +R+++VT+
Sbjct: 276 GVGKKSSEPECI-SLTWSPD----GQTLFSGWTDNLIRVWQVTK 314
>Hs5032159 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 577
Score = 52.4 bits (124), Expect = 1e-06
Identities = 40/155 (25%), Positives = 75/155 (47%), Gaps = 22/155 (14%)
Query: 7 GHSDLVHDISYDFYGRRVATCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVSLDWAA- 65
GH++ V+ I +D G +A+CS D +K++ + +E +L +AH+ I ++ W+
Sbjct: 410 GHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDL----QAHNKEIYTIKWSPT 465
Query: 66 ------PEFGRIIASVSYDKTIKLWEEDPDALELSGKRWQKLCTLNDATGPLFSVKFAPS 119
P ++AS S+D T++LW+ + R TL P++SV F+P
Sbjct: 466 GPATSNPNSNIMLASASFDSTVRLWDIE---------RGVCTHTLTKHQEPVYSVAFSPD 516
Query: 120 HLGLRLAALGNDGKLRLYDALESSDLRSWTLTSEI 154
G LA+ D + +++ + + S+ T I
Sbjct: 517 --GKYLASGSFDKCVHIWNTQSGNLVHSYRGTGGI 549
Score = 50.1 bits (118), Expect = 5e-06
Identities = 71/352 (20%), Positives = 130/352 (36%), Gaps = 65/352 (18%)
Query: 5 LTGHSDLVHDISYDFYGRRVATCSSDQHIKVFKLDKETNEWELSESWK------AHD--- 55
L GH V +++ +A+ S D +++ L++ +N + HD
Sbjct: 228 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPS 287
Query: 56 -SSIVSLDWAAPEFGRIIASVSYDKTIKLWEEDPDALELSGKRWQKLCTLNDATGPLFSV 114
+ SLDW G ++A+ SYD ++W ED + TL GP+F++
Sbjct: 288 NKDVTSLDWNTN--GTLLATGSYDGFARIWTEDGNLAS----------TLGQHKGPIFAL 335
Query: 115 KFAPSHLGLRLAALGNDGKLRLYDALESSDLRSWTLTS----EITVLNTPPASHLQSDFC 170
K+ + G + + G D ++DA + + S ++ N + +D C
Sbjct: 336 KW--NRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMC 393
Query: 171 LSWCPSRFSTERLVISAMDQATIYQRNKQGKLVPAGHLKGHTGLIRSIAWAPSVGRWYQL 230
+ C R +R P +GHT + +I W PS L
Sbjct: 394 IHVC--RLGCDR---------------------PVKTFQGHTNEVNAIKWDPSG----ML 426
Query: 231 IATGCKDGKLRIFKVTESRXXXXXXXXXXXXXXXXXXRDGPPIDS-------SAIDADGS 283
+A+ D L+I+ + + GP + ++ D +
Sbjct: 427 LASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDST 486
Query: 284 VANLHVEL-ISEHS--DHQGEVWSVSWNLTGTILSSTGDDGKIRLWKASYSN 332
V +E + H+ HQ V+SV+++ G L+S D + +W N
Sbjct: 487 VRLWDIERGVCTHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGN 538
>At4g29830 [R] KOG4155 FOG: WD40 repeat
Length = 321
Score = 52.4 bits (124), Expect = 1e-06
Identities = 74/317 (23%), Positives = 130/317 (40%), Gaps = 43/317 (13%)
Query: 26 TCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVSLDWAAPEFGRIIASVSYDKTIKLWE 85
T S D+ +K+++ D E +L + H + +L AA G I AS S D +++++
Sbjct: 35 TGSLDETVKLWRPD----ELDLVRTNTGHSLGVAAL--AAHPSGIIAASSSIDSFVRVFD 88
Query: 86 EDPDALELSGKRWQKLCTLNDATGPLFSVKFAPSHLGLRLAALGNDGKLRLYDALESSDL 145
D +A + L ++ ++F P L +A G+ ++L+D
Sbjct: 89 VDTNAT---------IAVLEAPPSEVWGMQFEPKGTILAVAG-GSSASVKLWDTA----- 133
Query: 146 RSWTLTSEITVL--NTPPASHLQSD--FCLS--WCPSRFSTERLVISAMDQATIYQRNKQ 199
SW L S +++ + P S S F LS W P+ +RL +MD +
Sbjct: 134 -SWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPNG---KRLACGSMDGTICVFDVDR 189
Query: 200 GKLVPAGHLKGHTGLIRSIAWAPSVGRWYQLIATGCKDGKLRIFKVTESRXXXXXXXXXX 259
KL+ L+GH +RS+ ++P R ++ +G DG + +
Sbjct: 190 SKLLH--QLEGHNMPVRSLVFSPVDPR---VLFSGSDDGHVNMHDAEGKTLLGSMSGHTS 244
Query: 260 XXXXXXXXRDGPPIDSSAIDADGSVANLHVEL-ISEHSDHQGEVWSVSWNLTGTI----- 313
DG I + + D + +L + I S+H +VWSV++ G
Sbjct: 245 WVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRPPGGTGVRAG 304
Query: 314 -LSSTGDDGKIRLWKAS 329
L+S DD + L+ S
Sbjct: 305 RLASVSDDKSVSLYDYS 321
>At5g08560 [S] KOG0293 WD40 repeat-containing protein
Length = 589
Score = 52.0 bits (123), Expect = 1e-06
Identities = 59/262 (22%), Positives = 111/262 (41%), Gaps = 32/262 (12%)
Query: 1 MKPFLTGHSDLVHDISYDFYGRRVATCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVS 60
+K L GH V I + R+V TC +++ I+ + +D + ++ S +S
Sbjct: 311 LKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSG----DCVHMYEKGGISPIS 366
Query: 61 LDWAAPEFGRIIASVSYDKTIKLWEEDPDALEL-SGKRWQKLCTL-------------ND 106
W P+ IIA ++ D++I +W+ D E G+R QK+ + D
Sbjct: 367 CGWY-PDGQGIIAGMT-DRSICMWDLDGREKECWKGQRTQKVSDIAMTDDGKWLVSVCKD 424
Query: 107 ATGPLFSVKFAPSHL-----GLRLAALGNDGKLRLYDALESSDLRSWTLTSEITVLNTPP 161
+ LF + L + +L ND K L + L + ++R W + + +++
Sbjct: 425 SVISLFDREATVERLIEEEDMITSFSLSNDNKYILVNLL-NQEIRLWNIEGDPKIVSRYK 483
Query: 162 ASHLQSDFCLSWCPSRFSTERLVISAMDQATIYQRNKQGKLVPAGHLKGHTGLIRSIAWA 221
H +S F + C + + + D GKL+ L GH G + ++W+
Sbjct: 484 G-HKRSRFIIRSCFGGYKQAFIASGSEDSQVYIWHRSTGKLIV--ELPGHAGAVNCVSWS 540
Query: 222 PSVGRWYQLIATGCKDGKLRIF 243
P+ ++A+ DG +RI+
Sbjct: 541 PTN---LHMLASASDDGTIRIW 559
>At2g26060 [R] KOG0645 WD40 repeat protein
Length = 323
Score = 52.0 bits (123), Expect = 1e-06
Identities = 38/149 (25%), Positives = 63/149 (41%), Gaps = 6/149 (4%)
Query: 198 KQGKLVPAGHLKGHTGLIRSIAWAP--SVGRWYQLIATGCK-DGKLRIFKVTESRXXXXX 254
K +LV L+GHT + S+AW P S I C D +RI++ +
Sbjct: 3 KNLELVEIQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTC 62
Query: 255 XXXXXXXXXXXXXRDGPPIDSSAIDADGSVANLH---VELISEHSDHQGEVWSVSWNLTG 311
G + +++ D + + E IS H+ EV SVSWN +G
Sbjct: 63 KTHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASG 122
Query: 312 TILSSTGDDGKIRLWKASYSNEFRCMSVV 340
+ L++ D + +W+ NE+ C +V+
Sbjct: 123 SCLATCSRDKSVWIWEVLEGNEYDCAAVL 151
>SPAP17D4.01 [U] KOG0277 Peroxisomal targeting signal type 2 receptor
Length = 297
Score = 51.6 bits (122), Expect = 2e-06
Identities = 57/222 (25%), Positives = 91/222 (40%), Gaps = 35/222 (15%)
Query: 23 RVATCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVSLDWAAPEFGRIIASVSYDKTIK 82
+V C D +++F L + WK H + IV++D + RI+ + S+D TIK
Sbjct: 63 QVYACCGDGSLRLFDLTMPSKP---IHKWKEHKAEIVAIDTNTVD-RRIVVTGSWDGTIK 118
Query: 83 LWEEDPDALELSGKRWQKLCTLNDATGP-LFSVKFAPSHLGLRLAALGNDGKLRLYDALE 141
LW G + TLN+ + + +V S L L +DG + +D
Sbjct: 119 LW---------LGNLPNSVQTLNNGSNSRILTVATHYSSPNL-LGYTSSDGLCKFWDFRS 168
Query: 142 SSDLRSWTLTSEITVLNTPPASHLQSDFCLSWCPSRFSTERLVISAMDQATIYQRNKQGK 201
S S + ++IT C++W S R+V +A + +Y +
Sbjct: 169 SDKFMSIEIPNQIT--------------CMNWSK---SNHRMVYTADNNNLVYCYDIANL 211
Query: 202 LVPAGHLKGHTGLIRSIAWAPSVGRWYQLIATGCKDGKLRIF 243
P L GH +RSI + S + L+AT D RIF
Sbjct: 212 KTPLSVLSGHQLAVRSIKSSNSA---HDLLATASYDMTSRIF 250
>Hs16445424 [Z] KOG0313 Microtubule binding protein YTM1 (contains WD40
repeats)
Length = 423
Score = 50.1 bits (118), Expect = 5e-06
Identities = 81/347 (23%), Positives = 139/347 (39%), Gaps = 89/347 (25%)
Query: 5 LTGHSDLVHDISY---DFYGRRVATCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVSL 61
+ GH+D+V D+++ D + + S DQ I +++ + E N+ + + H S+ S+
Sbjct: 136 IVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSI 195
Query: 62 DWAAPEFGRIIASVSYDKTIKLWEEDP----DALELSGKRWQK-------------LCTL 104
A G S S+DK +K+W P D +E S R +K + TL
Sbjct: 196 --AVDGSGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTL 253
Query: 105 NDATGPLFSVKFAPSHLGLRLAALGNDGKLRLYDALESSDLRSWTLTSEITVLNTPPASH 164
+ + SV ++ + + + D +R++D + S L+S TLT V N
Sbjct: 254 SGHMEAVSSVLWSDAE---EICSASWDHTIRVWD-VGSGSLKS-TLTGN-KVFN------ 301
Query: 165 LQSDFCLSWCPSRFSTERLVISAMDQATIY--QRNKQGKLVPAGHLKGHTGLIRSIAWAP 222
C+S+ P +RL + D+ R K G LV L HTG + S+ W+P
Sbjct: 302 -----CISYSPL---CKRLASGSTDRHIRLWDPRTKDGSLVSLS-LTSHTGWVTSVKWSP 352
Query: 223 SVGRWYQLIATGCKDGKLRIFKVTESRXXXXXXXXXXXXXXXXXXRDGPPIDSSAIDADG 282
+ Q + +G D ++++ + P D +A
Sbjct: 353 T---HEQQLISGSLDNIVKLWDTRSCK--------------------APLYDLAA----- 384
Query: 283 SVANLHVELISEHSDHQGEVWSVSWNLTGTILSSTGDDGKIRLWKAS 329
H+ +V SV W TG +LS G D K+ ++ S
Sbjct: 385 ---------------HEDKVLSVDWTDTGLLLSG-GADNKLYSYRYS 415
>At3g49660 [R] KOG0266 WD40 repeat-containing protein
Length = 317
Score = 50.1 bits (118), Expect = 5e-06
Identities = 59/260 (22%), Positives = 112/260 (42%), Gaps = 37/260 (14%)
Query: 6 TGHSDLVHDISYDFYGRRVATCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVSLDWAA 65
TGH + + D+++ R + + S D+ +K++ D ET L ++ H + +++
Sbjct: 68 TGHENGISDVAFSSDARFIVSASDDKTLKLW--DVETGS--LIKTLIGHTNYAFCVNFNP 123
Query: 66 PEFGRIIASVSYDKTIKLWE-------------EDP--------DALELSGKRWQKLCTL 104
+I S S+D+T+++W+ DP D + + LC +
Sbjct: 124 QS--NMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRI 181
Query: 105 NDA-TGPLFSVKFAPSHLGLRLAALGNDGKLRLYDALESSDLRSWTLTSEITVLNTPPAS 163
D+ TG + + +GK L L+++ LR W ++S L T
Sbjct: 182 WDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNT-LRLWNISS-AKFLKT-YTG 238
Query: 164 HLQSDFCLSWCPSRFSTERLVISAMDQATIYQRNKQGKLVPAGHLKGHTGLIRSIAWAPS 223
H+ + +C+S S + +R+V + D KL+ L+GHT + ++A P+
Sbjct: 239 HVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQ--KLEGHTETVMNVACHPT 296
Query: 224 VGRWYQLIATGCKDGKLRIF 243
LIA+G D +RI+
Sbjct: 297 ----ENLIASGSLDKTVRIW 312
>Hs4502123_2 [R] KOG4155 FOG: WD40 repeat
Length = 625
Score = 50.1 bits (118), Expect = 5e-06
Identities = 46/220 (20%), Positives = 93/220 (41%), Gaps = 25/220 (11%)
Query: 5 LTGHSDLVHDISYDFYGRRVATCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVSLDWA 64
+ H D V ++ R +ATCS D+ +K++ + EL ++ H + +
Sbjct: 73 IKAHEDEVLCCAFSTDDRFIATCSVDKKVKIW----NSMTGELVHTYDEHSEQVNCCHFT 128
Query: 65 APEFGRIIASVSYDKTIKLWEEDPDALELSGKRWQKLC--TLNDATGPLFSVKFAPSHLG 122
++A+ S D +KLW+ + QK C T+ T + +F+P
Sbjct: 129 NSSHHLLLATGSSDCFLKLWDLN-----------QKECRNTMFGHTNSVNHCRFSPD--D 175
Query: 123 LRLAALGNDGKLRLYDALESSDLRSWTLTSEITVLNTPPASHLQSDFCLSWCPSRFSTER 182
LA+ DG L+L+DA +++ +S + L P C SW R
Sbjct: 176 KLLASCSADGTLKLWDATSANERKSINVKQFFLNLEDPQEDMEVIVKCCSWSA---DGAR 232
Query: 183 LVISAMDQATIYQRNKQGKLVPAGHLKGHTGLIRSIAWAP 222
++++A ++ ++ + + K+ +GH + + ++P
Sbjct: 233 IMVAAKNKIFLWNTDSRSKVADC---RGHLSWVHGVMFSP 269
>CE29339 [S] KOG0295 WD40 repeat-containing protein
Length = 404
Score = 49.7 bits (117), Expect = 6e-06
Identities = 27/81 (33%), Positives = 47/81 (57%), Gaps = 5/81 (6%)
Query: 5 LTGHSDLVHDISYDFYGRRVATCSSDQHIKVFKLDKETNEWELSESWKAHDSSIVSLDWA 64
L GH+D V+DI+ D G+++ +CSSD IK++ + ++ +S K H+ ++ S+ +
Sbjct: 144 LKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQ---TYDCLKSLKGHEHTVSSVTFL 200
Query: 65 APEFGRIIASVSYDKTIKLWE 85
G + S S D TIK W+
Sbjct: 201 PT--GDFVLSASRDHTIKQWD 219
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.133 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,932,620
Number of Sequences: 60738
Number of extensions: 829262
Number of successful extensions: 4698
Number of sequences better than 1.0e-05: 40
Number of HSP's better than 0.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 4343
Number of HSP's gapped (non-prelim): 221
length of query: 344
length of database: 30,389,216
effective HSP length: 107
effective length of query: 237
effective length of database: 23,890,250
effective search space: 5661989250
effective search space used: 5661989250
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)