ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI1914 good T KOG1363 Signal transduction mechanisms Predicted regulator of the ubiquitin pathway (contains UAS and UBX domains)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI1914 682401 681166 -412
(412 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YDL091c [T] KOG1363 Predicted regulator of the ubiquitin pathway... 279 6e-75
SPCC285.11 [T] KOG1363 Predicted regulator of the ubiquitin path... 123 6e-28
At4g10790 [T] KOG1363 Predicted regulator of the ubiquitin pathw... 70 6e-12
7298477 [T] KOG1363 Predicted regulator of the ubiquitin pathway... 69 2e-11
>YDL091c [T] KOG1363 Predicted regulator of the ubiquitin pathway (contains
UAS and UBX domains)
Length = 455
Score = 279 bits (713), Expect = 6e-75
Identities = 171/444 (38%), Positives = 249/444 (55%), Gaps = 57/444 (12%)
Query: 18 SFTPLPGSFPED------------NDNTEQPEQETILNAGVPRILKMCXXXXXXXXXXXX 65
SF +PG+F E+ N NT +P Q + + IL
Sbjct: 14 SFIRIPGAFREEPPADLNGRTEDQNSNTNEPTQSR--DGRLKSILHFLFQAPLIVLYYLL 71
Query: 66 XXXXXSVEVFKPIGKIFHFYTRKDNHFSDDLGNQFVNVIDVLSSSADT------------ 113
S + KP+ ++ FY RK N D +Q +++ L + A
Sbjct: 72 NFIVRSSRLLKPLLRLHGFYQRKHNRLLDH-SSQLHRLLENLENEAQAVTCSEGNGNNDD 130
Query: 114 ---------NEQSG--YTFDTLYNVENGMLSKNMIKGGYTDILRRCSSDGKFAIISFFNP 162
NE SG ++F +LYN ENG SK++++ YT++L CS KF +I +P
Sbjct: 131 GSNTDSTSNNESSGVQFSFGSLYNPENGTFSKSIMQNSYTELLDACSEQVKFGVIYLHDP 190
Query: 163 ILYDPFEYVRKILTSNEFVECVTKYNCVVWFCDVTTPQGLQTANSLKIRQFPFLGALGPQ 222
+L + +YV KIL S FV + KY ++W+ DVTT +GLQ +N+LKIRQ+P LG + +
Sbjct: 191 LLDNHMDYVNKILCSEAFVNMIRKYQVLLWYGDVTTSEGLQVSNALKIRQYPLLGIISLK 250
Query: 223 RNNKMKLLARVEGQLFDYDFSHFEAKLASYYSVLVEIRRQRQYQEMQRLLREQQDSRYQE 282
K++L+ARVEG + +Y EA + YS L+++R+QRQ EMQRL+R+QQDSRYQ+
Sbjct: 251 AEKKIELIARVEGSISNYKAQDLEAIFSKNYSRLIQLRQQRQNIEMQRLIRQQQDSRYQD 310
Query: 283 SLERDQERD-RVIEESQ----------LKKKWLAWRKSVLVPEPSG--DGCRVSIRLEN- 328
SL RDQ+R+ +E++Q ++ +WL WRKS L PEPS D +V+IRLEN
Sbjct: 311 SLRRDQQRESERLEQTQREQMEREHQRIENQWLLWRKSQLKPEPSSDKDASKVAIRLENG 370
Query: 329 ERIIRRFDASLTIEEIYAYVALYRAGLLSDTSSENDI--TQEKPNYEYQYDFQLYSPVPR 386
+R++R+FDASL EEIYA+V L +L +SEND + NY++QY F+L +PVPR
Sbjct: 371 QRLVRKFDASLPTEEIYAFVELQLHDML---NSENDTLPVYQPANYQHQYSFKLITPVPR 427
Query: 387 TRLEPTTVIKEERTIYPSGTIVVE 410
L+ +T I + IYPSG IV+E
Sbjct: 428 RELDLSTKISDVSGIYPSGNIVME 451
>SPCC285.11 [T] KOG1363 Predicted regulator of the ubiquitin pathway (contains
UAS and UBX domains)
Length = 427
Score = 123 bits (308), Expect = 6e-28
Identities = 99/331 (29%), Positives = 158/331 (46%), Gaps = 32/331 (9%)
Query: 109 SSADTNEQSGYTFDTLYNVENGMLSKNMIKGGYTDILRRCSSDGKFAIISFFNPILYDPF 168
S ADT + + Y E+ GGY + L R + A++ F + D
Sbjct: 101 SPADTANKLVQNLEEQYGTEH---IDFFTDGGYMEALTRIKRNYGVALLFFTSSKNDDSE 157
Query: 169 EYVRKILTSNEFVECVTKYNCVVWFCDVTTPQGLQTANSLKIRQFP--FLGALGPQRNNK 226
+ R +L + E E + + N + W DV + + + +FP L PQ + +
Sbjct: 158 TFSRSVLMNQELKEFLNRRNILCWTGDVCEDEAFRGSRQFHCTKFPSAVLVMYSPQLS-E 216
Query: 227 MKLLARVEGQLFDYDF-SHFEAKLASYYSVLVEIRRQRQYQEMQRLLREQQDSRYQESLE 285
+ + A++ G L ++ LA + L R +R+ +E R LR QQD+ YQ SL
Sbjct: 217 LVVAAQLHGCLDSSSIITNLTNALAKHLPSLERFRSEREAREAARELRRQQDNAYQASLA 276
Query: 286 RDQER--------DRVIEESQ-------LKKKWLAWRKSVLVPEPSGDG--CRVSIRL-E 327
RD+ER +R+ +E + KK++ AW S L PEPS + R+SIR +
Sbjct: 277 RDRERQAFARAEEERLAKEKEEREIVQKKKKQYRAWLASNLPPEPSSEDEPARLSIRFPD 336
Query: 328 NERIIRRFDASLTIEEIYAYV--ALYRAGLLSD----TSSENDITQEKPNYEYQYDFQLY 381
R +RRF T+E +Y YV L+ + TSS N +T +Y++ + FQLY
Sbjct: 337 GSRAVRRFKKDDTVESVYNYVDYMLFEKEEPEEFGRATSSSNPVTPPS-DYKHDFHFQLY 395
Query: 382 SPVPRTRLEPTTVIKEERTIYPSGTIVVEFE 412
S +PR L+P+ I + I+P+GT+VVE +
Sbjct: 396 SSLPRALLKPSVAISTNKAIFPNGTVVVELD 426
>At4g10790 [T] KOG1363 Predicted regulator of the ubiquitin pathway (contains
UAS and UBX domains)
Length = 480
Score = 70.1 bits (170), Expect = 6e-12
Identities = 72/289 (24%), Positives = 116/289 (39%), Gaps = 40/289 (13%)
Query: 97 GNQFVNVIDVLSSSADTNEQSGYTFDTLYNVENGMLSKNMIKGGYTDILRRCSSDGKFAI 156
G++ ++ V S+ + E FD Y N + + G+ D L+R S K
Sbjct: 148 GSESARLVSVSSAVGEAMEFVAL-FDRDYG-SNNAFKIDFVVEGFMDALQRSRSSFKLLF 205
Query: 157 ISFFNPILYDPFEYVRKILTSNEFVECVTKYNCVVWFCDVTTPQGLQTANSLKIRQFPFL 216
+ +P D + L NE V N V W + + +G + +NSLK +FPF
Sbjct: 206 VYLHSPDHPDTPVFCGGTLC-NEAVVAFVNENFVSWGGSIRSSEGFKMSNSLKASRFPFC 264
Query: 217 GALGPQRNNKMKLLARVEGQLFDYDFSHFEAKLASYYS-VLVEIRRQRQYQEMQRLLREQ 275
+ P N ++ LL +VEG + ++ S LV R + + + LRE+
Sbjct: 265 AVVMPAANQRIALLQQVEGPKSPEEMLAILQRIVEDSSPTLVTARVEAEERRTNLRLREE 324
Query: 276 QDSRYQESLERDQERD--------------------------------RVIEESQLKKKW 303
QD+ Y+ +LE DQ R+ R EE Q +
Sbjct: 325 QDAAYRAALEADQAREQQRQEEKERLEREAAEAERKLKEEEEARERAAREAEERQAARVR 384
Query: 304 LAWRKSVLV---PEPSGDGCRVSIRLEN-ERIIRRFDASLTIEEIYAYV 348
+ K++ + PE D +V +R N ER R F + I+ +Y YV
Sbjct: 385 MRQEKALALGEEPEKGPDVTQVLVRFPNGERKGRMFKSETKIQTLYDYV 433
>7298477 [T] KOG1363 Predicted regulator of the ubiquitin pathway (contains
UAS and UBX domains)
Length = 464
Score = 68.6 bits (166), Expect = 2e-11
Identities = 63/262 (24%), Positives = 120/262 (45%), Gaps = 36/262 (13%)
Query: 138 KGGYTDILRRCSSDGKFAIISFFNPILYDPF--EYVRKILTSNEFVECVTKYNCVVWFCD 195
+G Y L + +F I+ +P + R L++ ++ + + ++W CD
Sbjct: 165 QGTYAQALNDAKQELRFLIVYLHKDPAKNPDVESFCRNTLSARSVIDYINTHT-LLWGCD 223
Query: 196 VTTPQGLQTANSLKIRQFPFLGALGPQRNNKMKLLARVEGQLFDYDFSHFEAKLASYYSV 255
V TP+G + S+ +R +P + + R N+M ++ R EG + + + V
Sbjct: 224 VATPEGYRVMQSITVRSYPTMVMIS-LRANRMMIVGRFEGDCTPEELLRRLQSVTNANEV 282
Query: 256 -LVEIRRQRQYQEMQRLLREQQDSRYQESLERDQERDR--------------VIEES--- 297
L + R R + + LR QQD Y++SL D+E++R +E++
Sbjct: 283 WLSQARADRLERNFTQTLRRQQDEAYEQSLLADEEKERQRQRERDAVRQAEEAVEQARRD 342
Query: 298 -QLKKKWLAWRK---SVLVP-EPSGD---GCRVSIRL-ENERIIRRFDASLTIEEIYAYV 348
+L+K+ +A +K + LVP EP+ D V +L R+ RRF+ + ++ ++Y Y+
Sbjct: 343 VELRKEEIARQKIELATLVPSEPAADAVGAIAVVFKLPSGTRLERRFNQTDSVLDVYHYL 402
Query: 349 ALYRAGLLSDTSSENDITQEKP 370
+ D+ E +IT P
Sbjct: 403 FCH-----PDSPDEFEITTNFP 419
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.136 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,725,004
Number of Sequences: 60738
Number of extensions: 1064497
Number of successful extensions: 4850
Number of sequences better than 1.0e-05: 4
Number of HSP's better than 0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 4835
Number of HSP's gapped (non-prelim): 5
length of query: 412
length of database: 30,389,216
effective HSP length: 109
effective length of query: 303
effective length of database: 23,768,774
effective search space: 7201938522
effective search space used: 7201938522
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)