ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI1918 good O KOG0365 Posttranslational modification, protein turnover, chaperones Beta subunit of farnesyltransferase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI1918 684075 682789 -429
(429 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YDL090c [O] KOG0365 Beta subunit of farnesyltransferase 414 e-115
SPAC17G6.04c [O] KOG0365 Beta subunit of farnesyltransferase 236 4e-62
7300143 [O] KOG0365 Beta subunit of farnesyltransferase 236 6e-62
Hs10835059 [O] KOG0365 Beta subunit of farnesyltransferase 231 2e-60
CE09598 [O] KOG0365 Beta subunit of farnesyltransferase 213 4e-55
At5g40280 [O] KOG0365 Beta subunit of farnesyltransferase 189 5e-48
YPR176c [O] KOG0366 Protein geranylgeranyltransferase type II be... 138 1e-32
At2g39550 [O] KOG0367 Protein geranylgeranyltransferase Type I b... 136 7e-32
CE24762 [O] KOG0366 Protein geranylgeranyltransferase type II be... 133 6e-31
CE22159 [O] KOG0367 Protein geranylgeranyltransferase Type I bet... 129 6e-30
Hs21359854 [O] KOG0366 Protein geranylgeranyltransferase type II... 126 5e-29
At5g12210 [O] KOG0366 Protein geranylgeranyltransferase type II ... 125 9e-29
At3g12070 [O] KOG0366 Protein geranylgeranyltransferase type II ... 125 1e-28
SPAC167.02 [O] KOG0366 Protein geranylgeranyltransferase type II... 123 6e-28
HsM4759018 [O] KOG0366 Protein geranylgeranyltransferase type II... 122 1e-27
7295883 [O] KOG0366 Protein geranylgeranyltransferase type II be... 121 2e-27
Hs4826900 [O] KOG0367 Protein geranylgeranyltransferase Type I b... 112 8e-25
7296904 [O] KOG0367 Protein geranylgeranyltransferase Type I bet... 106 8e-23
SPAC2E1P5.04c [O] KOG0367 Protein geranylgeranyltransferase Type... 99 1e-20
ECU08g1290 [O] KOG0366 Protein geranylgeranyltransferase type II... 86 8e-17
YGL155w [O] KOG0367 Protein geranylgeranyltransferase Type I bet... 71 3e-12
>YDL090c [O] KOG0365 Beta subunit of farnesyltransferase
Length = 431
Score = 414 bits (1063), Expect = e-115
Identities = 207/415 (49%), Positives = 277/415 (65%), Gaps = 7/415 (1%)
Query: 8 RAIKKMSYLRTNVLGRKR--XXXXXXXXXXXXXXXIRTSNTGLITETLVEREELINECLE 65
R+I + ++ T +LGRKR I+ L T+T R +++ LE
Sbjct: 7 RSIARAKFINTALLGRKRPVMERVVDIAHVDSSKAIQPLMKELETDTTEARYKVLQSVLE 66
Query: 66 LYEKAPEKFNHLQKDSHKMFLEYWLNNPLPSGFKSLDASQPWLLYWIGNAFKTMNPTWLT 125
+Y+ L K+ HKM+L+ LP +LDASQPW+LYWI N+ K M+ WL+
Sbjct: 67 IYDDEKNIEPALTKEFHKMYLDVAFEISLPPQMTALDASQPWMLYWIANSLKVMDRDWLS 126
Query: 126 NDYQKRILDKLWYISPTGGPFSGGKHQLPHLAATYAAINSIALCHNLDDNRE-INKKAIY 184
+D +++I+DKL+ ISP+GGPF GG QL HLA+TYAAIN+++LC N+D + I++K IY
Sbjct: 127 DDTKRKIVDKLFTISPSGGPFGGGPGQLSHLASTYAAINALSLCDNIDGCWDRIDRKGIY 186
Query: 185 DWLISLKTPSGAFMTARPVGEQDVRGVYTALSIASLLGIVDSKLTSNVTEFLTRCQSYEG 244
WLISLK P+G F T VGE D RG+Y ALSIA+LL I+ +LT V +L CQ+YEG
Sbjct: 187 QWLISLKEPNGGFKTCLEVGEVDTRGIYCALSIATLLNILTEELTEGVLNYLKNCQNYEG 246
Query: 245 GFGGCPN-DEAHGGYTFCAVASLAMLNALDKVNIDALLSWCSSRQTKEEKGLNGRSNKLT 303
GFG CP+ DEAHGGYTFCA ASLA+L ++D++N++ LL W S+RQ +EE+G GRSNKL
Sbjct: 247 GFGSCPHVDEAHGGYTFCATASLAILRSMDQINVEKLLEWSSARQLQEERGFCGRSNKLV 306
Query: 304 DGCYSFWVGGTAAILEAYGYGVCIDKDALKQYILKCCQSEESPGLRDKPGTQADFYHTNY 363
DGCYSFWVGG+AAILEA+GYG C +K AL+ YIL CCQ +E PGLRDKPG +DFYHTNY
Sbjct: 307 DGCYSFWVGGSAAILEAFGYGQCFNKHALRDYILYCCQEKEQPGLRDKPGAHSDFYHTNY 366
Query: 364 VLAGLSICEHSF-MVRNNSPFDFVATP--LXXXXXXXXIHPIFGLAILDVNNFIN 415
L GL++ E S+ N+SP + TP L ++P++GL I +V I+
Sbjct: 367 CLLGLAVAESSYSCTPNDSPHNIKCTPDRLIGSSKLTDVNPVYGLPIENVRKIIH 421
>SPAC17G6.04c [O] KOG0365 Beta subunit of farnesyltransferase
Length = 382
Score = 236 bits (603), Expect = 4e-62
Identities = 146/366 (39%), Positives = 198/366 (53%), Gaps = 20/366 (5%)
Query: 49 ITETLVEREELINECLELYEKAPEKFNHLQKDSHKMFLEYWLNNPLPSGFKSLDASQPWL 108
++ET V + E L L + FN LQK H +L L+ PLPS F LDAS+ W+
Sbjct: 4 LSETQVMQNETATAVLPLLNGESQSFN-LQK--HLKYLTKMLD-PLPSPFTVLDASRAWM 59
Query: 109 LYWIGNAFKTMNPTWLTNDYQKRILDKLWYISPTGGPFSGGKHQLPHLAATYAAINSIAL 168
+YW ++ + L + +R + + + G F GG Q HL +TYA+I SI L
Sbjct: 60 VYWELSSLAILGK--LDSSVCERAISSVRQLKGPSGGFCGGNGQDEHLLSTYASILSICL 117
Query: 169 CHNLDDNREINKKAIYDWLISLKTPSGAFMTARPVGEQDVRGVYTALSIASLLGI-VDSK 227
C + D I + +YDWL SLK P G+F GE D R VY A+ ++SL+GI +D
Sbjct: 118 CDSTDAYSLIERDRLYDWLFSLKNPDGSFRVNNE-GESDARSVYAAVCVSSLVGISMDDP 176
Query: 228 LTSNVTEFLTRCQSYEGGFGGCPNDEAHGGYTFCAVASLAMLNALDKVNIDALLSWCSSR 287
L ++L +CQ+YEGG G P EAHGGYTFCA+A++A+L LD +N L +W R
Sbjct: 177 LFEGTLQWLCKCQTYEGGLSGVPYAEAHGGYTFCALAAIALLGGLDNLNEIKLSTWLVQR 236
Query: 288 QTKEEKGLNGRSNKLTDGCYSFWVGGTAAILEAYGYGVCIDK---------DALKQYILK 338
Q G +GRSNKL DGCYS+WVG + I+ A GYG K + L YIL+
Sbjct: 237 QDPALYGFSGRSNKLVDGCYSWWVGASHVIV-ASGYGSASHKSLPNLFYNPEKLLGYILQ 295
Query: 339 CCQSEESPGLRDKPGTQADFYHTNYVLAGLSICEHSFMVRNNSPFDFVATPLXXXXXXXX 398
CCQS S GLRDKP + D YHT Y L GLS + + + + + + L
Sbjct: 296 CCQS-TSGGLRDKPPKRPDQYHTCYCLLGLSSIAYDYRYHTSDGWSYKPSILHSSLSSLL 354
Query: 399 -IHPIF 403
HPI+
Sbjct: 355 PAHPIY 360
>7300143 [O] KOG0365 Beta subunit of farnesyltransferase
Length = 419
Score = 236 bits (601), Expect = 6e-62
Identities = 135/331 (40%), Positives = 189/331 (56%), Gaps = 17/331 (5%)
Query: 57 EELINECLELYEK---APEKFNHLQKDSHKMFLEYWLNNPLPSGFKSLDASQPWLLYWIG 113
E + +C + +E+ + + + H+ +L+ L LPS ++ LD+S+ W +YWI
Sbjct: 37 ESSVEKCFDRFEQIMFTDPRLTQIFRLEHQYYLDAMLRR-LPSNYECLDSSRAWCVYWIL 95
Query: 114 NAFKTMNPTWLTNDYQKRILDKLWYISPTGGPFSGGKHQLPHLAATYAAINSIALCHNLD 173
A + ++ + + SPTGG F GG Q HLA TYAA+NS+ + +
Sbjct: 96 QAAQLLSFNFDDQTLNHVVQFLSNCRSPTGG-FGGGPGQYAHLAPTYAAVNSLCIIGSEQ 154
Query: 174 DNREINKKAIYDWLISLKTPSGAFMTARPVGEQDVRGVYTALSIASLLGI---VDSKLTS 230
R I++ + +L S++ G+F GE DVRG Y A+S A LL + V +L +
Sbjct: 155 AYRAIDRPTLVQFLFSVRDSDGSFRL-HVDGETDVRGAYCAISCAKLLNLPEPVIKELFA 213
Query: 231 NVTEFLTRCQSYEGGFGGCPNDEAHGGYTFCAVASLAMLNALDKVNIDALLSWCSSRQTK 290
+++ +CQ+YEGGFGG P EAHGGYTFC +A LA+LN DK + ALL W RQ
Sbjct: 214 GTGDWIAQCQTYEGGFGGAPGLEAHGGYTFCGIAGLALLNEADKCDRQALLKWTLRRQMT 273
Query: 291 EEKGLNGRSNKLTDGCYSFWVGGTAAILEAYGYGV-------CIDKDALKQYILKCCQSE 343
E G GR+NKL DGCYSFWVG T I +A GV D +AL++YIL CCQ +
Sbjct: 274 YEGGFQGRTNKLVDGCYSFWVGATIPITQATLSGVDKQMEHTLFDVEALQEYILLCCQ-K 332
Query: 344 ESPGLRDKPGTQADFYHTNYVLAGLSICEHS 374
+S GL DKPG D YHT Y L+G+SI +HS
Sbjct: 333 QSGGLIDKPGKPQDLYHTCYTLSGVSIAQHS 363
>Hs10835059 [O] KOG0365 Beta subunit of farnesyltransferase
Length = 437
Score = 231 bits (588), Expect = 2e-60
Identities = 142/354 (40%), Positives = 195/354 (54%), Gaps = 34/354 (9%)
Query: 42 RTSNTGLITETLVER---EELINECLELYEKAPEKFNHL------QKDSHKMFLEYWLNN 92
R + + T T +E+ EE I E Y KFNHL Q++ H +L+ L
Sbjct: 34 RLQDDSVETVTSIEQAKVEEKIQEVFSSY-----KFNHLVPRLVLQREKHFHYLKRGLRQ 88
Query: 93 PLPSGFKSLDASQPWLLYWIGNAFKTMN---PTWLTNDYQKRILDKLWYISPTGGPFSGG 149
L ++ LDAS+PWL YWI ++ + ++ P + D + + +L SP GG F GG
Sbjct: 89 -LTDAYECLDASRPWLCYWILHSLELLDEPIPQIVATDVCQFL--ELCQ-SPEGG-FGGG 143
Query: 150 KHQLPHLAATYAAINSIALCHNLDDNREINKKAIYDWLISLKTPSGAFMTARPVGEQDVR 209
Q PHLA TYAA+N++ + + IN++ + +L SLK P G+F+ GE DVR
Sbjct: 144 PGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQPDGSFLM-HVGGEVDVR 202
Query: 210 GVYTALSIASLLGIVDSKLTSNVTEFLTRCQSYEGGFGGCPNDEAHGGYTFCAVASLAML 269
Y A S+ASL I+ L E++ RCQ++EGG GG P EAHGGYTFC +A+L +L
Sbjct: 203 SAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVIL 262
Query: 270 NALDKVNIDALLSWCSSRQTKEEKGLNGRSNKLTDGCYSFWVGGTAAILEAYGYGV---- 325
+N+ +LL W +SRQ + E G GR NKL DGCYSFW G +L +
Sbjct: 263 KRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHRALHAQGDPA 322
Query: 326 ------CIDKDALKQYILKCCQSEESPGLRDKPGTQADFYHTNYVLAGLSICEH 373
+ AL++YIL CCQ + GL DKPG DFYHT Y L+GLSI +H
Sbjct: 323 LSMSHWMFHQQALQEYILMCCQC-PAGGLLDKPGKSRDFYHTCYCLSGLSIAQH 375
>CE09598 [O] KOG0365 Beta subunit of farnesyltransferase
Length = 401
Score = 213 bits (542), Expect = 4e-55
Identities = 122/308 (39%), Positives = 173/308 (55%), Gaps = 11/308 (3%)
Query: 79 KDSHKMFLEYWLNNPLPSGFKSLDASQPWLLYWIGNAFKTMNPTWLTNDYQKRILDKLWY 138
+ H +L +L N PS + +LDAS+ W+ YW NA K ++ + ND + I+ L
Sbjct: 63 RQKHASYLLRYLKN-CPSSYATLDASRSWMCYWGVNALKILDAE-IPNDVIENIIVFLKS 120
Query: 139 ISPTGGPFSGGKHQLPHLAATYAAINSIALCHNLDDNREINKKAIYDWLISLKTPSGAFM 198
G + GG QL HLA TYAA+ + + R IN+ ++++L K SG F
Sbjct: 121 CEHPEGGYGGGPGQLAHLAPTYAAVMCLVSLQKEEALRSINRVTLFNFLKKCKHESGGFY 180
Query: 199 TARPVGEQDVRGVYTALSIASLLGIVDSKLTSNVTEFLTRCQSYEGGFGGCPNDEAHGGY 258
GE D+R Y AL+ ++G+ ++++ V E++ CQS+EGGFGG P EAHGGY
Sbjct: 181 MHEG-GEIDMRSAYCALATCEIVGLPMDEISNGVAEWIISCQSFEGGFGGEPYTEAHGGY 239
Query: 259 TFCAVASLAMLNALDKVNIDALLSWCSSRQTKEEKGLNGRSNKLTDGCYSFWVGGTAAIL 318
TFCAVASL +LN +++ LL W + RQ + E G GR+NKL DGCYSFW G +L
Sbjct: 240 TFCAVASLVLLNRFRLADMEGLLRWATRRQMRFEGGFQGRTNKLVDGCYSFWQGAIFPLL 299
Query: 319 --EAYGYGVCIDKD-----ALKQYILKCCQSEESPGLRDKPGTQADFYHTNYVLAGLSIC 371
E G ++K L++YIL CQS G +DKP D YHT YVL+GLS+
Sbjct: 300 DGEMEREGRSLEKGLFEARMLEEYILVGCQSVHG-GFKDKPDKPVDLYHTCYVLSGLSVA 358
Query: 372 EHSFMVRN 379
+ + R+
Sbjct: 359 QKYSLARD 366
>At5g40280 [O] KOG0365 Beta subunit of farnesyltransferase
Length = 482
Score = 189 bits (481), Expect = 5e-48
Identities = 96/243 (39%), Positives = 147/243 (59%), Gaps = 4/243 (1%)
Query: 77 LQKDSHKMFLEYWLNNPLPSGFKSLDASQPWLLYWIGNAFKTMNPTWLTNDYQKRILDKL 136
+Q+D +L L P F SLDA++PWL YWI ++ + T + ++ + +D L
Sbjct: 81 IQRDKQLDYLMKGLRQLGPQ-FSSLDANRPWLCYWILHSIALLGET-VDDELESNAIDFL 138
Query: 137 WYISPTGGPFSGGKHQLPHLAATYAAINSIALCHNLDDNREINKKAIYDWLISLKTPSGA 196
+ G + GG QLPHLA TYAA+N++ IN++ + +L +K SG
Sbjct: 139 GRCQGSEGGYGGGPGQLPHLATTYAAVNALVTLGGDKALSSINREKMSCFLRRMKDTSGG 198
Query: 197 FMTARPVGEQDVRGVYTALSIASLLGIVDSKLTSNVTEFLTRCQSYEGGFGGCPNDEAHG 256
F +GE DVR YTA+S+AS+L I+D +LT + +++ CQ+YEGG GG P EAHG
Sbjct: 199 FRM-HDMGEMDVRACYTAISVASILNIMDDELTQGLGDYILSCQTYEGGIGGEPGSEAHG 257
Query: 257 GYTFCAVASLAMLNALDKVNIDALLSWCSSRQTKEEKGLNGRSNKLTDGCYSFWVGGTAA 316
GYT+C +A++ ++N +D++N+D+L++W RQ E G GR+NKL DGCY+FW
Sbjct: 258 GYTYCGLAAMILINEVDRLNLDSLMNWAVHRQ-GVEMGFQGRTNKLVDGCYTFWQAAPCV 316
Query: 317 ILE 319
+L+
Sbjct: 317 LLQ 319
>YPR176c [O] KOG0366 Protein geranylgeranyltransferase type II beta subunit
Length = 325
Score = 138 bits (348), Expect = 1e-32
Identities = 82/236 (34%), Positives = 129/236 (53%), Gaps = 7/236 (2%)
Query: 144 GPFSGGKHQLPHLAATYAAINSIALCHNLDDNREINKKAIYDWLISLKTPSGAFMTARPV 203
G F+ HL T +A+ +A LD + K + ++ + G+F R
Sbjct: 73 GAFAPFPRHDAHLLTTLSAVQILATYDALDVLGKDRKVRLISFIRGNQLEDGSFQGDR-F 131
Query: 204 GEQDVRGVYTALSIASLLGIVDSKLTSNVTEFLTRCQSYEGGFGGCPNDEAHGGYTFCAV 263
GE D R VYTALS S+LG + S++ +F+ +C +++GGFG CPN E+H F +
Sbjct: 132 GEVDTRFVYTALSALSILGELTSEVVDPAVDFVLKCYNFDGGFGLCPNAESHAAQAFTCL 191
Query: 264 ASLAMLNALDKVNIDAL--LSWCSSRQTKEEKGLNGRSNKLTDGCYSFWVGGTAAILEAY 321
+LA+ N LD ++ D L + W + E GLNGR +KL D CYS+WV + AI+
Sbjct: 192 GALAIANKLDMLSDDQLEEIGWWLCERQLPEGGLNGRPSKLPDVCYSWWVLSSLAIIGRL 251
Query: 322 GYGVCIDKDALKQYILKCCQSEESPGLRDKPGTQADFYHTNYVLAGLSICEHSFMV 377
+ I+ + L ++ILK CQ E+ G+ D+P + D +HT + +AGLS+ + +V
Sbjct: 252 DW---INYEKLTEFILK-CQDEKKGGISDRPENEVDVFHTVFGVAGLSLMGYDNLV 303
>At2g39550 [O] KOG0367 Protein geranylgeranyltransferase Type I beta subunit
Length = 375
Score = 136 bits (342), Expect = 7e-32
Identities = 81/234 (34%), Positives = 125/234 (52%), Gaps = 19/234 (8%)
Query: 150 KHQLPHLAATYAAINSIALCHNLDDNREINKKAIYDWLISLKTPSGAFMTARPVGEQDVR 209
KH HLA+TY A+ + + + D I+ K++ +I+L+ G+FM GE D+R
Sbjct: 129 KHNGSHLASTYCALAILKVIGH--DLSTIDSKSLLISMINLQQDDGSFMPIHIGGETDLR 186
Query: 210 GVYTALSIASLLGIVDSKLTSNVTEFLTRCQSYEGGFGGCPNDEAHGGYTFCAVASLAML 269
VY A +I +L + ++ CQSY+GGFG P E+HGG T+CA+ASL ++
Sbjct: 187 FVYCAAAICYMLDSWSGMDKESAKNYILNCQSYDGGFGLIPGSESHGGATYCAIASLRLM 246
Query: 270 N--ALDKVNIDA---------LLSWCSSRQTKEEKGLNGRSNKLTDGCYSFWVGGTAAIL 318
+D ++ D+ LL+WC RQ + G GR+NK +D CY+FW+G A+L
Sbjct: 247 GYIGVDLLSNDSSSSIIDPSLLLNWCLQRQA-NDGGFQGRTNKPSDTCYAFWIG---AVL 302
Query: 319 EAYGYGVCIDKDALKQYILKCCQSEESPGLRDKPGTQADFYHTNYVLAGLSICE 372
+ G IDK AL+++++ C + G PG D YH+ Y S+ E
Sbjct: 303 KLIGGDALIDKMALRKFLMSC--QSKYGGFSKFPGQLPDLYHSYYGYTAFSLLE 354
>CE24762 [O] KOG0366 Protein geranylgeranyltransferase type II beta subunit
Length = 335
Score = 133 bits (334), Expect = 6e-31
Identities = 89/296 (30%), Positives = 144/296 (48%), Gaps = 11/296 (3%)
Query: 75 NHLQKDSHKMFLEYWLNNPLPSGFKSLDASQPWLLYWIGNAFKTMNPTWLTNDYQKRILD 134
N L KD H F+ + N + + + +YW NA L + I++
Sbjct: 22 NELLKDLHANFINQYEKNKNSYHYIMAEHLRVSGIYWCVNAMDLSKQ--LERMSTEEIVN 79
Query: 135 KLWYISPTGGPFSGGKHQLPHLAATYAAINSIALCHNLDDNREINKKAIYDWLISLKTPS 194
+ T G + HL T A+ ++ + ++++ + + I +++ L+
Sbjct: 80 YVLGCRNTDGGYGPAPGHDSHLLHTLCAVQTLIIFNSIE---KADADTISEYVKGLQQED 136
Query: 195 GAFMTARPVGEQDVRGVYTALSIASLLGIVDSKLTSNVTEFLTRCQSYEGGFGGCPNDEA 254
G+F GE D R +L+ LLG + + + FL RC + +GGFG P E+
Sbjct: 137 GSFCGDLS-GEVDTRFTLCSLATCHLLGRLSTLNIDSAVRFLMRCYNTDGGFGTRPGSES 195
Query: 255 HGGYTFCAVASLAMLNALDKVNIDALLSWCSSRQTKEEKGLNGRSNKLTDGCYSFWVGGT 314
H G +C V +LA+ LD+++ D W + RQ + GLNGR KL D CYS+WV +
Sbjct: 196 HSGQIYCCVGALAIAGRLDEIDRDRTAEWLAFRQC-DSGGLNGRPEKLPDVCYSWWVLAS 254
Query: 315 AAILEAYGYGVCIDKDALKQYILKCCQSEESPGLRDKPGTQADFYHTNYVLAGLSI 370
AIL + ID DA+K++I CQ +E+ G D+PG AD +HT + +A LS+
Sbjct: 255 LAILGRLNF---IDSDAMKKFIY-ACQDDETGGFADRPGDCADPFHTVFGIAALSL 306
>CE22159 [O] KOG0367 Protein geranylgeranyltransferase Type I beta subunit
Length = 360
Score = 129 bits (325), Expect = 6e-30
Identities = 97/334 (29%), Positives = 170/334 (50%), Gaps = 34/334 (10%)
Query: 61 NECLELYEKAPEKFNHLQKDSHKMFLEYWLN--NPLPSGFKSLDASQPWLLYWIGNAFKT 118
++ LE KA E + Q K + + + N P + +L+ S+ + + ++
Sbjct: 8 DQLLEFARKAAESGDQTQTFEFKKHIGFLIRHLNVFPQPYNTLETSRNTIFLFAISSLDL 67
Query: 119 MNP--TWLTNDYQKRILDKLWYISPTGGPFSG--GKHQLPH-------LAATYAAINSIA 167
+ LT + ++ +D ++ + T G G G H + LA TY+A+ S+A
Sbjct: 68 LGELDNLLTPERRQAYIDWIYGLQFTNGNVCGFRGSHSCENSGYDEANLAQTYSALLSLA 127
Query: 168 LCHNLDDNREINKKAIYDWLISLKTPSGAFMTARPVGEQDVRGVYTALSIASLLGIVDSK 227
+ DD +++++KAI + + + +G F + E D+R V+ A++I+ +L D +
Sbjct: 128 ILG--DDLKKVDRKAILKTVKTAQRDNGCFWSQGVGSESDMRFVFCAVAISHILD-GDKE 184
Query: 228 LTSNVTE---FLTRCQSYEGGFGGCPNDEAHGGYTFCAVASLAMLN------ALDKVNID 278
T + T+ FL + + +GG G P DE+HGG TFCA+ASLA+ N L + +ID
Sbjct: 185 QTIDWTKLAGFLRQSLNIDGGIGQAPGDESHGGSTFCAIASLALSNRLWTEEVLTRRDID 244
Query: 279 ALLSWCSSRQTKEEKGLNGRSNKLTDGCYSFWVGGTAAILEAYGYGVCIDKDALKQYILK 338
L+ W K++ G +GR++K D CY+FW+G T IL AY + K L+++++
Sbjct: 245 RLIRWAIQ---KQDIGFHGRAHKPDDSCYAFWIGATLKILNAYH---LVSKQHLREFLM- 297
Query: 339 CCQSEESPGL--RDKPGTQADFYHTNYVLAGLSI 370
CQ G +PG +D HT + +A LS+
Sbjct: 298 ICQHPHIGGFCKYPEPGGYSDILHTYFSIAALSL 331
>Hs21359854 [O] KOG0366 Protein geranylgeranyltransferase type II beta subunit
Length = 331
Score = 126 bits (317), Expect = 5e-29
Identities = 78/217 (35%), Positives = 115/217 (52%), Gaps = 9/217 (4%)
Query: 154 PHLAATYAAINSIALCHNLDDNREINKKAIYDWLISLKTPSGAFMTARPVGEQDVRGVYT 213
PHL T +A+ + L D I+ + +++ L+ G+F GE D R +
Sbjct: 93 PHLLYTLSAVQILTL---YDSINVIDVNKVVEYVKGLQKEDGSF-AGDIWGEIDTRFSFC 148
Query: 214 ALSIASLLGIVDSKLTSNVTEFLTRCQSYEGGFGGCPNDEAHGGYTFCAVASLAMLNALD 273
A++ +LLG +D+ EF+ C +++GGFG P E+H G +C LA+ + L
Sbjct: 149 AVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLH 208
Query: 274 KVNIDALLSWCSSRQTKEEKGLNGRSNKLTDGCYSFWVGGTAAILEAYGYGVCIDKDALK 333
+VN D L W RQ GLNGR KL D CYS+WV A L+ G ID++ L+
Sbjct: 209 QVNSDLLGWWLCERQL-PSGGLNGRPEKLPDVCYSWWV---LASLKIIGRLHWIDREKLR 264
Query: 334 QYILKCCQSEESPGLRDKPGTQADFYHTNYVLAGLSI 370
+IL CQ EE+ G D+PG D +HT + +AGLS+
Sbjct: 265 NFIL-ACQDEETGGFADRPGDMVDPFHTLFGIAGLSL 300
>At5g12210 [O] KOG0366 Protein geranylgeranyltransferase type II beta subunit
Length = 313
Score = 125 bits (315), Expect = 9e-29
Identities = 94/306 (30%), Positives = 146/306 (46%), Gaps = 33/306 (10%)
Query: 68 EKAPEKFNHLQKDSHKMFLEYWLNNPLPSGFKSLDASQPWLLYWIGNAFKTMNPTWLTND 127
EK E F + D +M YW G +LD LL +G + +WL
Sbjct: 17 EKKKESFESVVMDHLRMNGAYW-------GLTTLD-----LLDKLGCVSEEEVISWLMTC 64
Query: 128 YQKRILDKLWYISPTGGPFSGGKHQLPHLAATYAAINSIALCHNLDDNREINKKAIYDWL 187
+ G F+G PH+ T +A+ +AL ++ +I K + Y +
Sbjct: 65 QHE------------SGGFAGNTGHDPHILYTLSAVQILALFDKINI-LDIGKVSSY--V 109
Query: 188 ISLKTPSGAFMTARPVGEQDVRGVYTALSIASLLGIVDSKLTSNVTEFLTRCQSYEGGFG 247
L+ G+F + GE D R Y A+ S+L +D +++ C++ +GGFG
Sbjct: 110 AKLQNEDGSF-SGDMWGEIDTRFSYIAICCLSILKCLDKINVEKAVKYIVSCKNLDGGFG 168
Query: 248 GCPNDEAHGGYTFCAVASLAMLNALDKVNIDALLSWCSSRQTKEEKGLNGRSNKLTDGCY 307
P E+H G FC V +LA+ +L V+ D+L W RQ K GLNGR KL D CY
Sbjct: 169 CTPGAESHAGQIFCCVGALAITGSLHHVDKDSLGWWLCERQLK-AGGLNGRPEKLADVCY 227
Query: 308 SFWVGGTAAILEAYGYGVCIDKDALKQYILKCCQSEESPGLRDKPGTQADFYHTNYVLAG 367
S+WV + +++ + IDK L ++IL CQ ++ G+ D+P D +HT + +AG
Sbjct: 228 SWWVLSSLIMIDRVHW---IDKAKLVKFILD-CQDLDNGGISDRPEDAVDIFHTYFGVAG 283
Query: 368 LSICEH 373
LS+ E+
Sbjct: 284 LSLLEY 289
>At3g12070 [O] KOG0366 Protein geranylgeranyltransferase type II beta subunit
Length = 317
Score = 125 bits (314), Expect = 1e-28
Identities = 74/230 (32%), Positives = 122/230 (52%), Gaps = 8/230 (3%)
Query: 144 GPFSGGKHQLPHLAATYAAINSIALCHNLDDNREINKKAIYDWLISLKTPSGAFMTARPV 203
G F+G PH+ T +A+ +AL L+ ++ + + +++ L+ G+F +
Sbjct: 72 GGFAGNTGHDPHVLYTLSAVQILALFDKLNI---LDVEKVSNYIAGLQNEDGSF-SGDIW 127
Query: 204 GEQDVRGVYTALSIASLLGIVDSKLTSNVTEFLTRCQSYEGGFGGCPNDEAHGGYTFCAV 263
GE D R Y A+ S+L +D +++ C++ +GGFG P E+H G FC V
Sbjct: 128 GEVDTRFSYIAICCLSILKCLDKINVKKAVDYIVSCKNLDGGFGCSPGAESHAGQIFCCV 187
Query: 264 ASLAMLNALDKVNIDALLSWCSSRQTKEEKGLNGRSNKLTDGCYSFWVGGTAAILEAYGY 323
+LA+ L +V+ D L W RQ E GLNGR KL D CYS+WV + +++ +
Sbjct: 188 GALAITGNLHRVDKDLLGWWLCERQDYESGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHW 247
Query: 324 GVCIDKDALKQYILKCCQSEESPGLRDKPGTQADFYHTNYVLAGLSICEH 373
I+K L ++IL Q ++ G+ D+P D +HT + +AGLS+ E+
Sbjct: 248 ---IEKAKLVKFILD-SQDMDNGGISDRPSYTVDIFHTYFGVAGLSLLEY 293
>SPAC167.02 [O] KOG0366 Protein geranylgeranyltransferase type II beta subunit
Length = 311
Score = 123 bits (308), Expect = 6e-28
Identities = 79/244 (32%), Positives = 126/244 (51%), Gaps = 9/244 (3%)
Query: 129 QKRILDKLWYISPTGGPFSGGKHQLPHLAATYAAINSIALCHNLDDNREINKKAIYDWLI 188
++RI+ L G F+ H+ T A+ +A+ LD ++K + ++I
Sbjct: 54 KERIVSFLLSCLTESGGFACYPGHDDHITNTVYAVQVLAM---LDSLHVVDKDKVASYII 110
Query: 189 SLKTPSGAFMTARPVGEQDVRGVYTALSIASLLGIVDSKLTSNVTEFLTRCQSYEGGFGG 248
L+ G+ R GE D R +Y+ ++ ++LG +D + ++L +C +++GGFG
Sbjct: 111 GLQNEDGSMKGDR-WGEIDARFLYSGINCLAILGKLDYLNKNTAVDWLMKCYNFDGGFGL 169
Query: 249 CPNDEAHGGYTFCAVASLAMLNALDKVNIDALLSWCSSRQTKEEKGLNGRSNKLTDGCYS 308
CP E+HG F VA+L +LN LD ++ + L W S RQ K GLNGR KL D CY
Sbjct: 170 CPGAESHGAMVFTCVAALKILNKLDLIDEELLGWWISERQVK-GGGLNGRPEKLPDSCYG 228
Query: 309 FWVGGTAAILEAYGYGVCIDKDALKQYILKCCQSEESPGLRDKPGTQADFYHTNYVLAGL 368
+W AI+ + ID++ L ++L Q +S G D+ D YHT + LAGL
Sbjct: 229 WWDLSPLAIIGKLDW---IDRNQLIDFLLG-TQDADSGGFADRKEDATDVYHTCFSLAGL 284
Query: 369 SICE 372
S+ +
Sbjct: 285 SLLQ 288
>HsM4759018 [O] KOG0366 Protein geranylgeranyltransferase type II beta subunit
Length = 331
Score = 122 bits (306), Expect = 1e-27
Identities = 77/217 (35%), Positives = 113/217 (51%), Gaps = 9/217 (4%)
Query: 154 PHLAATYAAINSIALCHNLDDNREINKKAIYDWLISLKTPSGAFMTARPVGEQDVRGVYT 213
PHL T +A+ + L D I+ + +++ L+ G+F GE D R +
Sbjct: 93 PHLLYTLSAVQILTL---YDSINVIDVNKVVEYVKGLQKEDGSF-AGDIWGEIDTRFSFC 148
Query: 214 ALSIASLLGIVDSKLTSNVTEFLTRCQSYEGGFGGCPNDEAHGGYTFCAVASLAMLNALD 273
A++ +LLG +D+ EF+ C + +GGFG P E+H G +C LA+ + L
Sbjct: 149 AVATLALLGKLDAINVEKAIEFVLSCMNSDGGFGCRPGSESHAGQIYCCTGFLAITSQLH 208
Query: 274 KVNIDALLSWCSSRQTKEEKGLNGRSNKLTDGCYSFWVGGTAAILEAYGYGVCIDKDALK 333
+V D L W RQ GLNGR KL D CYS+WV A L+ G ID++ L+
Sbjct: 209 QVTSDLLGWWLCERQL-PSGGLNGRPEKLPDVCYSWWV---LASLKIIGRLHWIDREKLR 264
Query: 334 QYILKCCQSEESPGLRDKPGTQADFYHTNYVLAGLSI 370
+IL CQ EE+ G D+PG D +HT + +AGLS+
Sbjct: 265 NFIL-ACQDEETGGFADRPGDMVDPFHTLFGIAGLSL 300
>7295883 [O] KOG0366 Protein geranylgeranyltransferase type II beta subunit
Length = 347
Score = 121 bits (303), Expect = 2e-27
Identities = 79/236 (33%), Positives = 122/236 (51%), Gaps = 11/236 (4%)
Query: 141 PTGGPFSGGKHQLPHLAATYAAINSIALCHNLDDNREINKKAIYDWLISLKTPSGAFMTA 200
P G F+ + PHL T +AI LC D EI+++A+ +++ L+ P G+F
Sbjct: 92 PNTGGFAPCEGHDPHLLYTLSAIQ--ILC-TYDALEEIDREAVVRFVVGLQQPDGSFFGD 148
Query: 201 RPVGEQDVRGVYTALSIASLLGIVDSKLTSN--VTEFLTRCQSYEGGFGGCPNDEAHGGY 258
+ GE D R + A++ +LLG ++ + V L+ C +GGFG P E+H G
Sbjct: 149 K-WGEVDTRFSFCAVASLTLLGRMEQTIDVEKAVKFVLSCCNQTDGGFGSKPGAESHAGL 207
Query: 259 TFCAVASLAMLNALDKVNIDALLSWCSSRQTKEEKGLNGRSNKLTDGCYSFWVGGTAAIL 318
+C V ++ + L +++D L W RQ GLNGR KL D CYS+WV + I+
Sbjct: 208 IYCCVGFFSLTHRLHLLDVDKLGWWLCERQL-PSGGLNGRPEKLPDVCYSWWVLASLTIM 266
Query: 319 EAYGYGVCIDKDALKQYILKCCQSEESPGLRDKPGTQADFYHTNYVLAGLSICEHS 374
+ I + L+Q+IL CQ E+ G D+ G D +HT + + GLS+ HS
Sbjct: 267 GRLHW---ISSEKLQQFILS-CQDTETGGFSDRTGNMPDIFHTLFGIGGLSLLGHS 318
Score = 51.2 bits (121), Expect = 3e-06
Identities = 33/148 (22%), Positives = 69/148 (46%), Gaps = 5/148 (3%)
Query: 210 GVYTALSIASLLGIVDSKLTSNVTEFLTRCQ-SYEGGFGGCPNDEAHGGYTFCAVASLAM 268
G+Y + ++G ++ ++ EF+ RCQ GGF C + H YT A+ L
Sbjct: 60 GIYWGTTALDIMGQLERLERKSIIEFVKRCQCPNTGGFAPCEGHDPHLLYTLSAIQILCT 119
Query: 269 LNALDKVNIDALLSWCSSRQTKEEKGLNGRSNKLTDGCYSFWVGGTAAILEAYGYGVCID 328
+AL++++ +A++ + Q + + ++ D +SF + +L + ++
Sbjct: 120 YDALEEIDREAVVRFVVGLQQPDGSFFGDKWGEV-DTRFSFCAVASLTLLGRMEQTIDVE 178
Query: 329 KDALKQYILKCCQSEESPGLRDKPGTQA 356
K +++L CC + G KPG ++
Sbjct: 179 KAV--KFVLSCCNQTDG-GFGSKPGAES 203
>Hs4826900 [O] KOG0367 Protein geranylgeranyltransferase Type I beta subunit
Length = 377
Score = 112 bits (281), Expect = 8e-25
Identities = 72/239 (30%), Positives = 112/239 (46%), Gaps = 13/239 (5%)
Query: 140 SPTGGPFSGGKHQLPHLAATYAAINSIALCHNLDDNREINKKAIYDWLISLKTPSGAFMT 199
+P+ P + + H+A TY ++ + + DD +NK+A L +L+ G+F
Sbjct: 106 NPSKAPGTAHPYDSGHIAMTYTGLSCLVILG--DDLSRVNKEACLAGLRALQLEDGSFCA 163
Query: 200 ARPVGEQDVRGVYTALSIASLLGIVDSKLTSNVTEFLTRCQSYEGGFGGCPNDEAHGGYT 259
E D+R VY A I +L ++ R SY+ G E+HGG T
Sbjct: 164 VPEGSENDMRFVYCASCICYMLNNWSGMDMKKAITYIRRSMSYDNGLAQGAGLESHGGST 223
Query: 260 FCAVASLAMLNALDKV----NIDALLSWCSSRQTKEEKGLNGRSNKLTDGCYSFWVGGTA 315
FC +ASL ++ L++V ++ + WC RQ + G +GR NK D CYSFWVG T
Sbjct: 224 FCGIASLCLMGKLEEVFSEKELNRIKRWCIMRQ---QNGYHGRPNKPVDTCYSFWVGATL 280
Query: 316 AILEAYGYGVCIDKDALKQYILKCCQSEESPGLRDKPGTQADFYHTNYVLAGLSICEHS 374
+L+ + Y + + + YIL Q G P + D H + + GLS+ E S
Sbjct: 281 KLLKIFQY---TNFEKNRNYILS-TQDRLVGGFAKWPDSHPDALHAYFGICGLSLMEES 335
>7296904 [O] KOG0367 Protein geranylgeranyltransferase Type I beta subunit
Length = 395
Score = 106 bits (264), Expect = 8e-23
Identities = 74/223 (33%), Positives = 109/223 (48%), Gaps = 14/223 (6%)
Query: 151 HQLPHLAATYAAINSIALCHNL-DDNREINKKAIYDWLISLKTPSGAFMTARPVGEQDVR 209
+Q HLA TY S+A+ L DD +++K+I D + +++ P G+F E D+R
Sbjct: 108 YQWGHLAMTYT---SLAVLVTLGDDLSRLDRKSIVDGVAAVQKPEGSFSACIDGSEDDMR 164
Query: 210 GVYTALSIASLLGIVDSKLTSNVTEFLTRCQSYEGGFGGCPNDEAHGGYTFCAVASL--- 266
VY A +I +L + +F+TR Y+ GF EAHGG TFCA+A+L
Sbjct: 165 FVYCAATICYMLDYWGDVNKETMFQFITRSLRYDYGFSQELEGEAHGGTTFCALAALHLS 224
Query: 267 AMLNALDKVNIDALLSWCSSRQTKEEKGLNGRSNKLTDGCYSFWVGGTAAILEAYGYGVC 326
L+ LD ++ + W RQ G GR NK D CYSFW+G + IL+ +
Sbjct: 225 GQLHRLDATTVERMKRWLIFRQM---DGFQGRPNKPVDTCYSFWIGASLCILDGF---EL 278
Query: 327 IDKDALKQYILKCCQSEESPGLRDKPGTQADFYHTNYVLAGLS 369
D +++IL Q + G P D +HT L GL+
Sbjct: 279 TDYARNREFILS-TQDKLIGGFAKWPQATPDPFHTYLGLCGLA 320
>SPAC2E1P5.04c [O] KOG0367 Protein geranylgeranyltransferase Type I beta subunit
Length = 355
Score = 99.0 bits (245), Expect = 1e-20
Identities = 78/230 (33%), Positives = 114/230 (48%), Gaps = 29/230 (12%)
Query: 152 QLPHLAATYAAINSIALCHNLDDN-REINKKAIYDWLISLKTPSGAF--MTARPVGEQDV 208
Q P LA T + SI L DN I++ I +++ KT G F + +QD+
Sbjct: 93 QEPQLAGT---VFSICCLLFLGDNLSRIDRDLIKNFVELCKTSQGHFRSIAVPSCSDQDM 149
Query: 209 RGVYTALSIASLLGIVDSKLTSNVTEFLTRCQSYEGGFGGCPNDEAHGGYTFCAVASLAM 268
R +Y A +IASLL S ++ +++ CQ YEGGF P EAH G TFCA+AS ++
Sbjct: 150 RQLYMATTIASLLDFSLSDPLCSI-QYIKSCQRYEGGFSLLPYGEAHAGATFCALASWSL 208
Query: 269 L----------------NALDKV-NIDALLSWCSSRQTKEEKGLNGRSNKLTDGCYSFWV 311
+ N +D V ++ L+ W +SRQ GLNGR+NK D CY++WV
Sbjct: 209 ILKMIPNSSLNTSNQSYNLMDCVPKVERLIRWLASRQL-SSGGLNGRTNKDVDTCYAYWV 267
Query: 312 GGTAAILEAYGYGVCIDKDALKQYILKCCQSEESPGLRDKPGTQADFYHT 361
+ +L+A + ID L++Y+L Q G PG D H+
Sbjct: 268 LSSLKLLDALPF---IDGGELEKYLLLHAQ-HALGGFSKTPGEFPDVLHS 313
>ECU08g1290 [O] KOG0366 Protein geranylgeranyltransferase type II beta subunit
Length = 358
Score = 86.3 bits (212), Expect = 8e-17
Identities = 72/296 (24%), Positives = 130/296 (43%), Gaps = 34/296 (11%)
Query: 109 LYWIGNAFKTMNPTWLTNDYQKRILDKLWYISPTGGPFSGGKHQLPHLAATYAAINSIAL 168
+YW NA + + + + R++ + G F G + ++ +T+ A+ + +
Sbjct: 74 IYWSVNALSMLGRGEM-QEMRDRVVGYVMRCRNDDGGFGGCEGYSSNITSTFNALQILYI 132
Query: 169 CHNLDDNREINKKAIYDWLISLKTPSGAFMTARPVGEQDVRGVYTA---LSIASLL--GI 223
H +R ++ L P+G F GE D R A L + SL+ G
Sbjct: 133 YHIPYHDRSTAM-----FISGLLQPAGYFHNDG-YGETDTRISCCAVLGLHLLSLMERGD 186
Query: 224 VDSKLTSN----------------VTEFLTRCQSYEGGFGGCPNDEAHGGYTFCAVASLA 267
D + S + + +C + +GGFG E+H FC +++L
Sbjct: 187 FDPRSLSRPICKVFLAEAGVDPGAIVLYTQKCYNLDGGFGAVKGAESHAAQVFCCLSTLR 246
Query: 268 MLNALDKVNIDALLSWCSSRQTKEEKGLNGRSNKLTDGCYSFWVGGTAAILEAYGYGVCI 327
L AL+ V+ + + + +++Q GL+GR +K D CYSFW + ++ G +
Sbjct: 247 SLGALETVDREEVARFIATKQA-SSGGLSGRVSKKEDVCYSFWAYSSLVLI---GKECYV 302
Query: 328 DKDALKQYILKCCQSEESPGLRDKPGTQADFYHTNYVLAGLSICEHSFMVRNNSPF 383
+++ L ++I C S G D+PG + D YH + LAGLS+ + + R + F
Sbjct: 303 NQEELTRFIFSC--QGPSGGFSDRPGNETDLYHLMFALAGLSLLGYKGLRRIDPGF 356
>YGL155w [O] KOG0367 Protein geranylgeranyltransferase Type I beta subunit
Length = 376
Score = 71.2 bits (173), Expect = 3e-12
Identities = 79/347 (22%), Positives = 143/347 (40%), Gaps = 59/347 (17%)
Query: 82 HKMFLEYWLNNPLPSGFKSLDASQPWLLYWIGNAFKTMNPT----------WLTNDYQKR 131
H+ F E L LPS + D ++ ++++ + + W+ Y K
Sbjct: 16 HRKFFERHLQL-LPSSHQGHDVNRMAIIFYSISGLSIFDVNVSAKYGDHLGWMRKHYIKT 74
Query: 132 ILDKLWYISPTGGPFSGGK-HQLPH-----LAATYAAINSIALCHNLDDNREI-NKKAIY 184
+LD +G F G +PH L T A+ S+ + + + I +K+++
Sbjct: 75 VLDDTENTVISG--FVGSLVMNIPHATTINLPNTLFALLSMIMLRDYEYFETILDKRSLA 132
Query: 185 DWLISLKTPS-GAFMTA--------RPVGEQDVRGVYTALSIASLLGIVDSKL------T 229
++ + P G+F++ V D+R Y A++I + G + T
Sbjct: 133 RFVSKCQRPDRGSFVSCLDYKTNCGSSVDSDDLRFCYIAVAILYICGCRSKEDFDEYIDT 192
Query: 230 SNVTEFLTRCQSYEGGFGGCPNDEAHGGYTFCAVASLAMLNALDKVN---IDALLSWCSS 286
+ ++ Q Y G FG ++E H GYT CA+++LA+L++L+K++ + ++W
Sbjct: 193 EKLLGYIMSQQCYNGAFGA--HNEPHSGYTSCALSTLALLSSLEKLSDKFKEDTITWLLH 250
Query: 287 RQT------------------KEEKGLNGRSNKLTDGCYSFWVGGTAAILEAYGYGVCID 328
RQ ++ G GR NK D CY+FW + +L +C
Sbjct: 251 RQVSSHGCMKFESELNASYDQSDDGGFQGRENKFADTCYAFWCLNSLHLLTKDWKMLC-Q 309
Query: 329 KDALKQYILKCCQSEESPGLRDKPGTQADFYHTNYVLAGLSICEHSF 375
+ + Y+L Q + G AD YH+ A L++ E F
Sbjct: 310 TELVTNYLLDRTQKTLTGGFSKNDEEDADLYHSCLGSAALALIEGKF 356
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.136 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,097,548
Number of Sequences: 60738
Number of extensions: 1152240
Number of successful extensions: 2457
Number of sequences better than 1.0e-05: 21
Number of HSP's better than 0.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2330
Number of HSP's gapped (non-prelim): 33
length of query: 429
length of database: 30,389,216
effective HSP length: 109
effective length of query: 320
effective length of database: 23,768,774
effective search space: 7606007680
effective search space used: 7606007680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)