ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI1961 check: MH JT KOG0643 Signal transduction mechanisms Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1)
r_klactVI1961 check: MH JT KOG0643 Translation, ribosomal structure and biogenesis Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI1961 697593 698633 347
(347 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YMR146c [JT] KOG0643 Translation initiation factor 3 subunit i (... 444 e-124
SPAC4D7.05 [JT] KOG0643 Translation initiation factor 3 subunit ... 383 e-106
Hs4503513 [JT] KOG0643 Translation initiation factor 3 subunit i... 303 2e-82
7296910 [JT] KOG0643 Translation initiation factor 3 subunit i (... 289 5e-78
At2g46290 [JT] KOG0643 Translation initiation factor 3 subunit i... 268 9e-72
At2g46280 [JT] KOG0643 Translation initiation factor 3 subunit i... 265 1e-70
CE25603 [JT] KOG0643 Translation initiation factor 3 subunit i (... 239 6e-63
ECU10g0220 [JT] KOG0643 Translation initiation factor 3 subunit ... 167 2e-41
At3g15610 [I] KOG0278 Serine/threonine kinase receptor-associate... 117 2e-26
At1g15470 [I] KOG0278 Serine/threonine kinase receptor-associate... 115 7e-26
7291600 [I] KOG0278 Serine/threonine kinase receptor-associated ... 115 1e-25
Hs20149592 [I] KOG0278 Serine/threonine kinase receptor-associat... 107 3e-23
Hs22043408 [JT] KOG0643 Translation initiation factor 3 subunit ... 106 4e-23
At1g52730 [I] KOG0278 Serine/threonine kinase receptor-associate... 100 5e-21
Hs20537071 [I] KOG0278 Serine/threonine kinase receptor-associat... 79 1e-14
Hs17448550 [JT] KOG0643 Translation initiation factor 3 subunit ... 76 6e-14
7292465 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 75 1e-13
SPAC343.04c [S] KOG0293 WD40 repeat-containing protein 70 3e-12
Hs18544419 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp... 68 2e-11
Hs4758560 [A] KOG0265 U5 snRNP-specific protein-like factor and ... 66 9e-11
Hs13376840 [R] KOG4155 FOG: WD40 repeat 65 1e-10
At3g49660 [R] KOG0266 WD40 repeat-containing protein 65 1e-10
Hs16117781 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 65 1e-10
Hs16117779 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 65 1e-10
7299285 [R] KOG4155 FOG: WD40 repeat 65 1e-10
Hs16554627 [R] KOG0266 WD40 repeat-containing protein 65 2e-10
Hs13629793 [A] KOG0265 U5 snRNP-specific protein-like factor and... 64 3e-10
SPAC18B11.10 [R] KOG0266 WD40 repeat-containing protein 63 6e-10
7303694 [A] KOG0291 WD40-repeat-containing subunit of the 18S rR... 63 7e-10
Hs16445438 [R] KOG0644 Uncharacterized conserved protein contain... 62 2e-09
Hs16445436 [R] KOG0644 Uncharacterized conserved protein contain... 62 2e-09
ECU01g0610 [BK] KOG1063 RNA polymerase II elongator complex subu... 62 2e-09
Hs7706657 [S] KOG0282 mRNA splicing factor 61 2e-09
Hs9506645 [R] KOG0266 WD40 repeat-containing protein 61 3e-09
CE00901 [R] KOG0266 WD40 repeat-containing protein 61 3e-09
SPBC1289.11 [A] KOG0265 U5 snRNP-specific protein-like factor an... 60 4e-09
CE11748 [R] KOG0266 WD40 repeat-containing protein 60 4e-09
7290331 [R] KOG0266 WD40 repeat-containing protein 60 4e-09
At5g67320 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 60 6e-09
7302979 [S] KOG0295 WD40 repeat-containing protein 60 6e-09
At4g02730 [R] KOG0266 WD40 repeat-containing protein 59 1e-08
YBR198c [K] KOG0263 Transcription initiation factor TFIID subuni... 58 2e-08
Hs5032159 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 58 2e-08
Hs4557741 [S] KOG0295 WD40 repeat-containing protein 58 2e-08
Hs14150114 [S] KOG0316 Conserved WD40 repeat-containing protein 57 3e-08
YBR175w [R] KOG0266 WD40 repeat-containing protein 57 4e-08
CE27713 [A] KOG0265 U5 snRNP-specific protein-like factor and re... 57 4e-08
At5g08390 [D] KOG0267 Microtubule severing protein katanin p80 s... 57 5e-08
7301145 [R] KOG0644 Uncharacterized conserved protein contains W... 57 5e-08
YPR178w [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (... 56 7e-08
HsM4827028 [B] KOG0639 Transducin-like enhancer of split protein... 56 7e-08
Hs21541824 [B] KOG0639 Transducin-like enhancer of split protein... 56 7e-08
Hs21071067 [K] KOG0263 Transcription initiation factor TFIID sub... 56 7e-08
Hs14150171 [S] KOG1407 WD40 repeat protein 56 7e-08
7300980 [R] KOG4155 FOG: WD40 repeat 56 7e-08
SPAC26H5.03 [BL] KOG1009 Chromatin assembly complex 1 subunit B/... 56 9e-08
Hs19913371 [B] KOG0273 Beta-transducin family (WD-40 repeat) pro... 56 9e-08
CE27762 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 56 9e-08
CE25007 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 56 9e-08
SPBC713.05 [S] KOG0316 Conserved WD40 repeat-containing protein 55 1e-07
SPBC15D4.14 [K] KOG0263 Transcription initiation factor TFIID su... 55 1e-07
Hs11321585 [R] KOG0286 G-protein beta subunit 55 2e-07
At5g25150 [K] KOG0263 Transcription initiation factor TFIID subu... 55 2e-07
At1g11160 [D] KOG0267 Microtubule severing protein katanin p80 s... 55 2e-07
7296245 [A] KOG0265 U5 snRNP-specific protein-like factor and re... 55 2e-07
YLR129w [A] KOG0306 WD40-repeat-containing subunit of the 18S rR... 54 3e-07
Hs4827030 [B] KOG0639 Transducin-like enhancer of split protein ... 54 3e-07
At5g64730 [S] KOG0316 Conserved WD40 repeat-containing protein 54 3e-07
At5g52820 [S] KOG0271 Notchless-like WD40 repeat-containing protein 54 3e-07
At5g23430 [D] KOG0267 Microtubule severing protein katanin p80 s... 54 3e-07
7290895 [R] KOG0286 G-protein beta subunit 54 3e-07
CE11944 [Z] KOG0318 WD40 repeat stress protein/actin interacting... 54 3e-07
CE29339 [S] KOG0295 WD40 repeat-containing protein 54 4e-07
7293188 [D] KOG0267 Microtubule severing protein katanin p80 sub... 54 4e-07
Hs15150805 [B] KOG0273 Beta-transducin family (WD-40 repeat) pro... 53 6e-07
At1g71840 [S] KOG0296 Angio-associated migratory cell protein (c... 53 6e-07
SPBC31F10.13c [DK] KOG0973 Histone transcription regulator HIRA ... 53 8e-07
SPAC29E6.01 [S] KOG0281 Beta-TrCP (transducin repeats containing... 53 8e-07
Hs5729852 [R] KOG0286 G-protein beta subunit 53 8e-07
Hs20336270 [R] KOG0286 G-protein beta subunit 53 8e-07
SPCC5E4.03c [K] KOG0263 Transcription initiation factor TFIID su... 52 1e-06
SPAC630.14c [R] KOG0266 WD40 repeat-containing protein 52 1e-06
SPBC3D6.12 [A] KOG0306 WD40-repeat-containing subunit of the 18S... 52 1e-06
7298279 [S] KOG0316 Conserved WD40 repeat-containing protein 52 1e-06
CE27149 [S] KOG0316 Conserved WD40 repeat-containing protein 52 2e-06
At1g48630 [T] KOG0279 G protein beta subunit-like protein 52 2e-06
7296187 [S] KOG0271 Notchless-like WD40 repeat-containing protein 52 2e-06
SPAC227.12 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp... 51 2e-06
Hs11055998 [R] KOG0286 G-protein beta subunit 51 2e-06
7300806 [S] KOG0282 mRNA splicing factor 51 2e-06
7295309 [R] KOG0266 WD40 repeat-containing protein 51 2e-06
Hs8922428 [S] KOG0271 Notchless-like WD40 repeat-containing protein 51 3e-06
At5g16750 [A] KOG0319 WD40-repeat-containing subunit of the 18S ... 51 3e-06
CE17845 [R] KOG0286 G-protein beta subunit 50 4e-06
At5g50230 [R] KOG0288 WD40 repeat protein TipD 50 4e-06
YJL112w [R] KOG4155 FOG: WD40 repeat 50 5e-06
YCR084c [R] KOG0266 WD40 repeat-containing protein 50 5e-06
SPBC21B10.05c [R] KOG0315 G-protein beta subunit-like protein (c... 50 5e-06
7296209 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 50 5e-06
Hs20357529 [R] KOG0286 G-protein beta subunit 50 6e-06
CE03274 [A] KOG0640 mRNA cleavage stimulating factor complex; su... 50 6e-06
At2g41500 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4... 50 6e-06
7303841 [A] KOG0319 WD40-repeat-containing subunit of the 18S rR... 50 6e-06
CE27119 [R] KOG4155 FOG: WD40 repeat 49 8e-06
At3g18130 [T] KOG0279 G protein beta subunit-like protein 49 8e-06
Hs7108333_2 [R] KOG4155 FOG: WD40 repeat 49 8e-06
Hs4502123_2 [R] KOG4155 FOG: WD40 repeat 49 8e-06
>YMR146c [JT] KOG0643 Translation initiation factor 3 subunit i
(eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1)
Length = 347
Score = 444 bits (1141), Expect = e-124
Identities = 219/344 (63%), Positives = 265/344 (76%), Gaps = 2/344 (0%)
Query: 1 MRPIVLKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDV 60
M+ I L GHERPLTQVK+N++GDL+F+CSKDS AS+WY++NGERLGTLD H+GTIWSIDV
Sbjct: 1 MKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDV 60
Query: 61 DESTTYALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGHIG 120
D T Y +TG AD+ K+W V+ G V + + PV RVEFSP G+ L +LD VM + G
Sbjct: 61 DCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPG 120
Query: 121 SIVVYSLIRNE-NGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAY 179
SI +Y + R+ E+ V EEP ++I T E VA WS GKYIIAGH+DG+IS Y
Sbjct: 121 SINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKY 180
Query: 180 -YGENGEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTYKADCPL 238
N E+V + +HEKSI D+QFSPD TYFITSSRD+ + LVDV T +VLK Y+ DCPL
Sbjct: 181 DVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPL 240
Query: 239 NSASITPLKEFVILGGGQDAKDVTTTSAREGKFEARIYHKVFQDEIGRVKGHFGPLNYVA 298
N+A ITPLKEF+ILGGGQ+AKDVTTTSA EGKFEAR YHK+F++EIGRV+GHFGPLN VA
Sbjct: 241 NTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVA 300
Query: 299 VSPTGTSYASGGEDGYIRLHHFDKSYFDFKYDVEKTFEVERRQQ 342
+SP GTSYASGGEDG+IRLHHF+KSYFDFKYDVEK E + Q
Sbjct: 301 ISPQGTSYASGGEDGFIRLHHFEKSYFDFKYDVEKAAEAKEHMQ 344
>SPAC4D7.05 [JT] KOG0643 Translation initiation factor 3 subunit i
(eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1)
Length = 328
Score = 383 bits (983), Expect = e-106
Identities = 177/331 (53%), Positives = 247/331 (74%), Gaps = 7/331 (2%)
Query: 1 MRPIVLKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDV 60
MRPI+L+GHERPLTQ+K+N DGDL+F+C+KD V ++W++ NGERLGT + H+G IW+ D+
Sbjct: 1 MRPIILQGHERPLTQIKYNHDGDLLFSCAKDKVINVWFSHNGERLGTYEGHTGAIWTCDI 60
Query: 61 DESTTYALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGHIG 120
++S+T ++G AD ++W V TG ++ + V RVEF+ D +++L V + MG+ G
Sbjct: 61 NKSSTLMVSGAADNTMRLWDVKTGKQLYKWEFPTAVKRVEFNEDDTRILAVTEERMGYAG 120
Query: 121 SIVVYSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYY 180
++ V+ + +E+ E P Y ITT E +K VA WSY K++ GHEDG +S Y
Sbjct: 121 TVTVFRVPISESDAAA---ETPLYVITTRE--SKATVAGWSYLSKFLFTGHEDGSVSRYD 175
Query: 181 GENGEFVQAKKIHEK--SIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTYKADCPL 238
GEFV++K++H +I D+QF PDRTYFITS +D+ A +DVD+FEV+KTY D PL
Sbjct: 176 AITGEFVESKQVHNSGSTITDLQFYPDRTYFITSCKDTTAKAIDVDSFEVIKTYLTDTPL 235
Query: 239 NSASITPLKEFVILGGGQDAKDVTTTSAREGKFEARIYHKVFQDEIGRVKGHFGPLNYVA 298
N++S TP+++FVILGGGQ+A+DVTTT+AR+GKFEAR YH + ++E+GRVKGHFGP+N +A
Sbjct: 236 NTSSFTPVQDFVILGGGQEARDVTTTAARQGKFEARFYHAILEEELGRVKGHFGPINTIA 295
Query: 299 VSPTGTSYASGGEDGYIRLHHFDKSYFDFKY 329
V P GT YASGGEDGY+R+H FDK+YFDFKY
Sbjct: 296 VHPKGTGYASGGEDGYVRVHFFDKNYFDFKY 326
>Hs4503513 [JT] KOG0643 Translation initiation factor 3 subunit i
(eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1)
Length = 325
Score = 303 bits (776), Expect = 2e-82
Identities = 148/330 (44%), Positives = 216/330 (64%), Gaps = 6/330 (1%)
Query: 1 MRPIVLKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDV 60
M+PI+L+GHER +TQ+K+NR+GDL+F +KD + ++WY++NGERLGT H+G +W +D
Sbjct: 1 MKPILLQGHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVDA 60
Query: 61 DESTTYALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGHIG 120
D T + LTG AD ++W TG + + T S V F G+ ++ D MG+
Sbjct: 61 DWDTKHVLTGSADNSCRLWDCETGKQLALLKTNSAVRTCGFDFGGNIIMFSTDKQMGYQC 120
Query: 121 SIVVYSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYY 180
+ + L + +I N EP +I + +K+ A W G+ IIAGHE G+++ Y
Sbjct: 121 FVSFFDL--RDPSQIDN--NEPYMKIPCND--SKITSAVWGPLGECIIAGHESGELNQYS 174
Query: 181 GENGEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTYKADCPLNS 240
++GE + K H + I DIQ S D T F+T+S+D+ A L D T E KT++ + P+NS
Sbjct: 175 AKSGEVLVNVKEHSRQINDIQLSRDMTMFVTASKDNTAKLFDSTTLEHQKTFRTERPVNS 234
Query: 241 ASITPLKEFVILGGGQDAKDVTTTSAREGKFEARIYHKVFQDEIGRVKGHFGPLNYVAVS 300
A+++P + V+LGGGQ+A DVTTTS R GKFEAR +H F++E GRVKGHFGP+N VA
Sbjct: 235 AALSPNYDHVVLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEFGRVKGHFGPINSVAFH 294
Query: 301 PTGTSYASGGEDGYIRLHHFDKSYFDFKYD 330
P G SY+SGGEDGY+R+H+FD YF+F+++
Sbjct: 295 PDGKSYSSGGEDGYVRIHYFDPQYFEFEFE 324
>7296910 [JT] KOG0643 Translation initiation factor 3 subunit i
(eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1)
Length = 326
Score = 289 bits (739), Expect = 5e-78
Identities = 140/327 (42%), Positives = 209/327 (63%), Gaps = 6/327 (1%)
Query: 1 MRPIVLKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDV 60
MRP++L+GHER +TQ+K+NR+GDL+F+CSKD ++WY++NGERLGT D H G +W +DV
Sbjct: 1 MRPLMLQGHERSITQIKYNREGDLLFSCSKDQKPNVWYSLNGERLGTYDGHQGAVWCLDV 60
Query: 61 DESTTYALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGHIG 120
D + +TG D KIW V G + S+ T+S V FS G++ D MG
Sbjct: 61 DWESRKLITGAGDMTAKIWDVEYGTVIASIPTKSSVRTSNFSFSGNQAAYSTDKAMGQSC 120
Query: 121 SIVVYSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYY 180
+ + +RN + + ++EP I E +K+ W + II GH++G I+ +
Sbjct: 121 ELFLID-VRNADSSLS--EQEPTLRIPMTE--SKITSMLWGPLDETIITGHDNGNIAIWD 175
Query: 181 GENGE-FVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTYKADCPLN 239
G+ V + H I D+Q S D T F+T+S+D+ A L D ++ LKTYK + P+N
Sbjct: 176 IRKGQKVVDSGTDHSAGINDMQLSKDGTMFVTASKDTTAKLFDSESLMCLKTYKTERPVN 235
Query: 240 SASITPLKEFVILGGGQDAKDVTTTSAREGKFEARIYHKVFQDEIGRVKGHFGPLNYVAV 299
SA+I+P+ + V+LGGGQDA +VTTTS + GKF++R +H ++++E R+KGHFGP+N +A
Sbjct: 236 SAAISPIMDHVVLGGGQDAMEVTTTSTKAGKFDSRFFHLIYEEEFARLKGHFGPINSLAF 295
Query: 300 SPTGTSYASGGEDGYIRLHHFDKSYFD 326
P G SYASGGEDG++R+ FD +YF+
Sbjct: 296 HPDGKSYASGGEDGFVRVQTFDSTYFE 322
>At2g46290 [JT] KOG0643 Translation initiation factor 3 subunit i
(eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1)
Length = 328
Score = 268 bits (685), Expect = 9e-72
Identities = 137/334 (41%), Positives = 203/334 (60%), Gaps = 13/334 (3%)
Query: 1 MRPIVLKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDV 60
MRPI++KGHERPLT +++NR+GDL+F+C+KD ++W+A NGERLGT HSG +W D+
Sbjct: 1 MRPILMKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDI 60
Query: 61 DESTTYALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGHIG 120
++ +TG AD K+W V +G + + +P V+FS +I D +G
Sbjct: 61 SRDSSRLITGSADQTAKLWDVKSGKELFTFKFGAPARSVDFSVGDHLAVITTDHFVGTSS 120
Query: 121 SIVVYSLIRNEN---GEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQIS 177
+I V + + G+ V V + PD + K+ A W + I++G ED I
Sbjct: 121 AIHVKRIAEDPEDQVGDSVLVLQSPDGK-------KKINRAVWGPLNQTIVSGGEDAAIR 173
Query: 178 AYYGENGEFVQAKKI---HEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTYKA 234
+ E G+ ++ H+++I + + D ++F+T S D A L D+ T ++KTY
Sbjct: 174 IWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWDMRTLTLIKTYTT 233
Query: 235 DCPLNSASITPLKEFVILGGGQDAKDVTTTSAREGKFEARIYHKVFQDEIGRVKGHFGPL 294
P+N+ +++PL V+LGGGQDA VTTT R GKFEA+ Y + Q+EIG VKGHFGP+
Sbjct: 234 VVPVNAVAMSPLLNHVVLGGGQDASAVTTTDHRAGKFEAKFYDTILQEEIGGVKGHFGPI 293
Query: 295 NYVAVSPTGTSYASGGEDGYIRLHHFDKSYFDFK 328
N +A SP G S++SGGEDGY+RLHHFD +YF+ K
Sbjct: 294 NALAFSPDGKSFSSGGEDGYVRLHHFDSNYFNIK 327
>At2g46280 [JT] KOG0643 Translation initiation factor 3 subunit i
(eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1)
Length = 328
Score = 265 bits (676), Expect = 1e-70
Identities = 137/334 (41%), Positives = 201/334 (60%), Gaps = 13/334 (3%)
Query: 1 MRPIVLKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDV 60
MRPI++KGHERPLT +++NR+GDL+F+C+KD ++W+A NGERLGT H+G +W DV
Sbjct: 1 MRPILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDV 60
Query: 61 DESTTYALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGHIG 120
++ +TG AD K+W V +G + + +P V+F+ +I D +
Sbjct: 61 SRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRTA 120
Query: 121 SIVVYSLIRN---ENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQIS 177
+I V + + ++ E V V PD + ++ A W + I++G ED I
Sbjct: 121 AIHVKRIAEDPEEQDAESVLVLHCPDGK-------KRINRAVWGPLNQTIVSGGEDKVIR 173
Query: 178 AYYGENGEFVQAKKI---HEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTYKA 234
+ E G+ ++ H+K I + + D ++F+T S D A L D+ T +LKTY
Sbjct: 174 IWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYTT 233
Query: 235 DCPLNSASITPLKEFVILGGGQDAKDVTTTSAREGKFEARIYHKVFQDEIGRVKGHFGPL 294
P+N+ S++PL V+LGGGQDA VTTT R GKFEA+ Y K+ Q+EIG VKGHFGP+
Sbjct: 234 VVPVNAVSLSPLLNHVVLGGGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPI 293
Query: 295 NYVAVSPTGTSYASGGEDGYIRLHHFDKSYFDFK 328
N +A +P G S++SGGEDGY+RLHHFD YF+ K
Sbjct: 294 NALAFNPDGKSFSSGGEDGYVRLHHFDSDYFNIK 327
>CE25603 [JT] KOG0643 Translation initiation factor 3 subunit i
(eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1)
Length = 318
Score = 239 bits (609), Expect = 6e-63
Identities = 122/315 (38%), Positives = 184/315 (57%), Gaps = 8/315 (2%)
Query: 1 MRPIVLKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDV 60
MRP+ LKGHER LT+V+FNR+GDL F+C+KD +WY NGER+G+ D H+G +W IDV
Sbjct: 1 MRPLSLKGHERALTRVRFNREGDLTFSCAKDKKPCVWYTENGERIGSYDGHNGAVWDIDV 60
Query: 61 DESTTYALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGHIG 120
TT +T D KIW G +++++ ++P+ FS G+ + + ++
Sbjct: 61 SWDTTKCVTASGDLTVKIWDAELGNCLYTINHQTPMKSCGFSYSGNLVCFTTQKMTKNLS 120
Query: 121 SIVVYSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYY 180
+ V L ++ ++V E Y + T +F + G E G + Y
Sbjct: 121 TFQVRDL--RDSSQMVEGGESFFYSQFDVNATTALFTQM----DDLVTIGFESGLLQQYD 174
Query: 181 GENGE--FVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTYKADCPL 238
N + + +H S++D+Q SP + I++SRD A+L+DV+ + LK YK++ P+
Sbjct: 175 LRNPDTPIHTNESVHRYSVQDLQLSPRGDFLISASRDKTAALLDVNDLKKLKQYKSERPV 234
Query: 239 NSASITPLKEFVILGGGQDAKDVTTTSAREGKFEARIYHKVFQDEIGRVKGHFGPLNYVA 298
NSA I+P ++ + LGGG+DA VT TS G FEA+IYH VF++E R KGHFGP+N +A
Sbjct: 235 NSACISPNRDHICLGGGEDAMQVTQTSVSAGHFEAKIYHMVFEEEFARFKGHFGPINTMA 294
Query: 299 VSPTGTSYASGGEDG 313
P+GT A+GGEDG
Sbjct: 295 WHPSGTIIATGGEDG 309
>ECU10g0220 [JT] KOG0643 Translation initiation factor 3 subunit i
(eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1)
Length = 357
Score = 167 bits (423), Expect = 2e-41
Identities = 105/320 (32%), Positives = 165/320 (50%), Gaps = 15/320 (4%)
Query: 6 LKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTT 65
+K HERP+T+VKFN DGDL+F KDS A++ A +G +G H G+I+SI +D +
Sbjct: 44 IKCHERPITEVKFNYDGDLIFTAGKDSTATLLRA-DGSVIGEYKGHRGSIFSIAIDNKSD 102
Query: 66 YALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGHIGSIVVY 125
+TG AD +W V TG V ++F DG+ L+ D MG + ++
Sbjct: 103 ALMTGSADQSIILWDVPTGKVKAQADVGVVVKGLDFYRDGTLCLVCSDDSMGKTSLVGMF 162
Query: 126 SLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGENGE 185
+ +++ P KV + + + +++ G IS+ N +
Sbjct: 163 DTRSKDFRKVLTPASSP----------VKVLLDA---SEDFLVYCDSKGSISSVDLRNLQ 209
Query: 186 FVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTYKADCPLNSASITP 245
+++ +IH I +I+ S RT+FIT S DS + +VD V KT+ + P+N A+I
Sbjct: 210 TIKSARIHTSKINNIRPSRCRTFFITGSTDSQSKIVDFLDLSVQKTFVCEEPVNCAAIFN 269
Query: 246 LKEFVILGGGQDAKDVTTTSAREGKFEARIYHKVFQDEIGRVKGHFGPLNYVAVSPTGTS 305
+ VI GG +A+DVTTT + FEA + V ++IG HFG +N V V P+G
Sbjct: 270 TNDKVICVGGINARDVTTTKGK-SSFEANFFDVVTCEKIGSYSTHFGTINSVDVHPSGKL 328
Query: 306 YASGGEDGYIRLHHFDKSYF 325
Y SGGE+G + + F + +F
Sbjct: 329 YCSGGEEGTVTILAFAQDFF 348
>At3g15610 [I] KOG0278 Serine/threonine kinase receptor-associated protein
Length = 341
Score = 117 bits (294), Expect = 2e-26
Identities = 90/319 (28%), Positives = 143/319 (44%), Gaps = 35/319 (10%)
Query: 3 PIVLKGHERPLTQVKFNR---DGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSID 59
P+V GH RP+ + ++ DG + + SKDS + G+ +GT + H G +WS
Sbjct: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSQPMLRNGETGDWIGTFEGHKGAVWSSC 68
Query: 60 VDESTTYALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGHI 119
+D + A + ADF K+W TG +HS + V FS D L+ G
Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFSQDTKYLI-----TGGFE 123
Query: 120 GSIVVYSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHED-GQISA 178
+ V+ L N + P EI + + +W + + I++ D G +
Sbjct: 124 KILRVFDL---------NRLDAPPTEID--KSPGSIRTLTWLHGDQTILSSCTDIGGVRL 172
Query: 179 YYGENGEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTYKADCPL 238
+ +G+ VQ + + + + S D Y IT++ S D + F ++K+Y C +
Sbjct: 173 WDVRSGKIVQTLET-KSPVTSAEVSQDGRY-ITTADGSTVKFWDANHFGLVKSYDMPCNI 230
Query: 239 NSASITPLKEFVILGGGQDAKDVTTTSAREGKFEARIYHKVFQDEIGRVKGHFGPLNYVA 298
SAS+ P + GG+D R++ EIG KGH GP++ V
Sbjct: 231 ESASLEPKSGNKFVAGGED-------------MWVRLFDFHTGKEIGCNKGHHGPVHCVR 277
Query: 299 VSPTGTSYASGGEDGYIRL 317
+PTG SYASG EDG IR+
Sbjct: 278 FAPTGESYASGSEDGTIRI 296
>At1g15470 [I] KOG0278 Serine/threonine kinase receptor-associated protein
Length = 333
Score = 115 bits (289), Expect = 7e-26
Identities = 91/321 (28%), Positives = 140/321 (43%), Gaps = 39/321 (12%)
Query: 3 PIVLKGHERPLTQVKFNR---DGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSID 59
P+V GH RP+ V ++ DG + + SKDS + G+ +GT + H G +WS
Sbjct: 4 PLVCHGHSRPVVDVAYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCS 63
Query: 60 VDESTTYALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGHI 119
+D++ A + ADF KIW TG +HS + V FS D +LL G +
Sbjct: 64 LDKNAIRAASASADFTAKIWNALTGDELHSFEHKHIVRACAFSEDTHRLL------TGGM 117
Query: 120 GSIVVYSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHED-GQISA 178
I+ + + V P I T+E W ++ I++ D G I
Sbjct: 118 EKILRIFDLNRPDAPPKEVGNSPG-SIRTVE---------WLHSDNTILSSCTDTGDIRL 167
Query: 179 YYGENGEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTYKADCPL 238
+ + + V + + + + S D Y T+ SV D F +LK+Y C +
Sbjct: 168 WDIRSDKIVHTLET-KSPVTSAEVSQDGRYITTADGSSV-KFWDAKNFGLLKSYDMPCNV 225
Query: 239 NSASITPLKEFVILGGGQDAKDVTTTSAREGKFEARIYHKVFQ--DEIGRVKGHFGPLNY 296
SAS+ P + GG+D ++ FQ +EIG KGH GP++
Sbjct: 226 ESASLEPKHGNTFIAGGED---------------MWVHRFDFQTGEEIGCNKGHHGPVHC 270
Query: 297 VAVSPTGTSYASGGEDGYIRL 317
V +P G SY SG EDG +R+
Sbjct: 271 VRYAPGGESYTSGSEDGTVRI 291
>7291600 [I] KOG0278 Serine/threonine kinase receptor-associated protein
Length = 328
Score = 115 bits (287), Expect = 1e-25
Identities = 91/322 (28%), Positives = 142/322 (43%), Gaps = 43/322 (13%)
Query: 3 PIVLKGHERPLTQVKFNRDGD----LVFACSKDSVASIWYAINGERLGTLDDHSGTIWSI 58
P+ GH RP+ + F+ D L+ AC KD + + G+ +GT + H G +W+
Sbjct: 10 PLTCSGHTRPVVHLDFSDICDAGYFLISAC-KDGSPMLRHGDTGDWVGTFEGHKGAVWNA 68
Query: 59 DVDESTTYALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGH 118
++ + T A +G ADF K+W TG +HS + V V F D
Sbjct: 69 TLNRNATLAASGAADFTGKVWNAVTGAEIHSFQHKHIVKSVAFDRDSE------------ 116
Query: 119 IGSIVVYSLIRNENGEIVNV--KEEPDYEITTIEQATKVFVASWSYNG-KYIIAGHEDGQ 175
+++ N ++V V E+P+ + T + G K II+ ED
Sbjct: 117 -------NIVTGSNEKLVRVFNLEQPEAQPEEYAGHTGAIKRALFCRGDKCIISAAEDKT 169
Query: 176 ISAYYGENGEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTYKAD 235
+ + G VQ + + ++ S D + +T S S S ++DT + LK K
Sbjct: 170 VRLWDRMTGIEVQRLQFNSNP-NSLEISSD-NHILTISHGSSISFWEIDTLKKLKEVKVP 227
Query: 236 CPLNSASITPLKEFVILGGGQDAKDVTTTSAREGKFEARIYHKVFQDEIGRVKGHFGPLN 295
+ SAS+ P K V + GG+D F+ + + +EI KGHFGP++
Sbjct: 228 TNVASASLHPDKH-VFVCGGED-------------FKMYKFDYITGNEIESFKGHFGPVH 273
Query: 296 YVAVSPTGTSYASGGEDGYIRL 317
V SP G YASG EDG +RL
Sbjct: 274 SVKFSPDGELYASGSEDGTLRL 295
>Hs20149592 [I] KOG0278 Serine/threonine kinase receptor-associated protein
Length = 350
Score = 107 bits (266), Expect = 3e-23
Identities = 84/322 (26%), Positives = 145/322 (44%), Gaps = 44/322 (13%)
Query: 3 PIVLKGHERPLTQVKFNRD---GDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSID 59
P+ GH RP+ + F+ G + + KD + G+ +GT H G +W
Sbjct: 7 PLTCSGHTRPVVDLAFSGITPYGYFLISACKDGKPMLRQGDTGDWIGTFLGHKGAVWGAT 66
Query: 60 VDESTTYALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGHI 119
+++ T A T ADF K+W +G + +++ + V V+F+ D + LL G
Sbjct: 67 LNKDATKAATAAADFTAKVWDAVSGDELMTLAHKHIVKTVDFTQDSNYLL-----TGGQD 121
Query: 120 GSIVVYSLIRNENGEIVNVKEEPDYEITTIEQATK-VFVASWSYNGKYIIAGHEDGQISA 178
+ +Y L +P+ E I T + A W K I++ +D +
Sbjct: 122 KLLRIYDL------------NKPEAEPKEISGHTSGIKKALWCSEDKQILSA-DDKTVRL 168
Query: 179 YYGENGEFVQAKKIH-EKSIKDIQFSPDRTYFITSSRDSVA--SLVDVDTFEVLKTYKAD 235
+ ++ + K ++ S+ +++ P+ + + S+A S V +D +K+++A
Sbjct: 169 W--DHATMTEVKSLNFNMSVSSMEYIPEGEILVITYGRSIAFHSAVSLDP---IKSFEAP 223
Query: 236 CPLNSASITPLKEFVILGGGQDAKDVTTTSAREGKFEARIYHKVFQDEIGRVKGHFGPLN 295
+NSAS+ P KEF++ GG F+ Y +E+ KGHFGP++
Sbjct: 224 ATINSASLHPEKEFLVAGGED--------------FKLYKYDYNSGEELESYKGHFGPIH 269
Query: 296 YVAVSPTGTSYASGGEDGYIRL 317
V SP G YASG EDG +RL
Sbjct: 270 CVRFSPDGELYASGSEDGTLRL 291
>Hs22043408 [JT] KOG0643 Translation initiation factor 3 subunit i
(eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1)
Length = 98
Score = 106 bits (265), Expect = 4e-23
Identities = 42/84 (50%), Positives = 62/84 (73%)
Query: 1 MRPIVLKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDV 60
M+PI+L+GHER +TQ+K+NR+GDL+F +KD + ++WY++NGERLGT H+G +W +D
Sbjct: 1 MKPILLQGHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVDA 60
Query: 61 DESTTYALTGGADFCFKIWKVATG 84
D T + LTG AD ++W TG
Sbjct: 61 DWDTKHVLTGSADNSCRLWDCETG 84
>At1g52730 [I] KOG0278 Serine/threonine kinase receptor-associated protein
Length = 381
Score = 99.8 bits (247), Expect = 5e-21
Identities = 90/346 (26%), Positives = 150/346 (43%), Gaps = 51/346 (14%)
Query: 3 PIVLKGHERPLTQVKFNR---DGDLVFACSK--------DSVASIWYAINGERLGTLDDH 51
P V GH RP+ + ++ DG + + SK DS + G+ +GT + H
Sbjct: 9 PQVCHGHSRPVVDLFYSPITPDGFFLISASKEYSCLDGLDSHPMLRNGETGDWIGTFEGH 68
Query: 52 SGTIWSIDVDESTTYALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLLIV 111
G +WS +D + A + ADF K+W TG +HS + V FS D LL
Sbjct: 69 KGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFSEDTKSLL-- 126
Query: 112 LDAVMGHIGSIVVYSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGH 171
G + V+ + N + P E+ + + +W ++ + I++
Sbjct: 127 ---TGGFEKILRVFDM---------NRLDAPPTEVD--KSPGSIRTLTWLHSDQTILSSC 172
Query: 172 ED-GQISAYYGENGEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLK 230
D G + + +G+ VQ + + + + S D Y IT++ S D + F ++K
Sbjct: 173 TDIGGVRLWDVRSGKIVQTLET-KSPVTSAEVSQDGRY-ITTADGSTVKFWDANHFGLVK 230
Query: 231 TYKADCPLNSASITPLKEFVILGGGQD----------AKDVTT---TSAREGKFEARIYH 277
+Y C + SAS+ P + GG+D +++ S+ G ++ I
Sbjct: 231 SYDMPCNIESASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIVKFQIASSLIGVSDSVI-- 288
Query: 278 KVFQDEIGRV------KGHFGPLNYVAVSPTGTSYASGGEDGYIRL 317
+E+ R KGH GP++ V +PTG SYASG EDG IR+
Sbjct: 289 NSMSEELNRSLKHGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRI 334
>Hs20537071 [I] KOG0278 Serine/threonine kinase receptor-associated protein
Length = 348
Score = 78.6 bits (192), Expect = 1e-14
Identities = 80/318 (25%), Positives = 135/318 (42%), Gaps = 48/318 (15%)
Query: 8 GHERPLTQVKFN---RDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDEST 64
GH P+ + F+ G + + KD + G+ +GT H G +W ++
Sbjct: 12 GHTWPMVDLAFSGITTYGYFLTSAYKDGKPMLRQGDTGDWIGTFWGHKGAVWGATLN--A 69
Query: 65 TYALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGHIGSIVV 124
T A T ADF K+W G + +++ + V V F D + LL G + +
Sbjct: 70 TKAATAAADFTAKVWDAVLGDELMTLAHKYIVKTVYFMQDSNYLL-----TKGQDKLLRM 124
Query: 125 YSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGENG 184
Y L N + EI+ K + W K I++ + +A ++
Sbjct: 125 YDL---------NKPKARPKEISGHTSGIKKRLL-WCSEDKQILSADDK---TARLWDHA 171
Query: 185 EFVQAKKIH-EKSIKDIQFSPDRTYFITSSRDSVA--SLVDVDTFEVLKTYKADCPLNSA 241
+ K ++ S+ ++ P+ + + S+A S V +D + +++A +NSA
Sbjct: 172 TMTEVKSLNFNMSVSSTKYIPEGEILVITYGLSIAFHSAVSLDP---ITSFEAPATINSA 228
Query: 242 SITPLKEFVILGGGQDAKDVTTTSAREGKFEARIYHKVFQ--DEIGRVKGHFGPLNYVAV 299
S+ P KEF++ GG+D K +K F +E KG+FGP++ V
Sbjct: 229 SLHPEKEFLV-AGGEDFK----------------LYKYFNHGEEFESYKGYFGPIHCVRF 271
Query: 300 SPTGTSYASGGEDGYIRL 317
S G YASG EDG +RL
Sbjct: 272 SRDGELYASGSEDGTLRL 289
>Hs17448550 [JT] KOG0643 Translation initiation factor 3 subunit i
(eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1)
Length = 219
Score = 76.3 bits (186), Expect = 6e-14
Identities = 35/64 (54%), Positives = 44/64 (68%)
Query: 255 GQDAKDVTTTSAREGKFEARIYHKVFQDEIGRVKGHFGPLNYVAVSPTGTSYASGGEDGY 314
G++A DVTTT R GKFE+R H F++E RVKGHFGP+N VA P G SY+SG D
Sbjct: 128 GEEAMDVTTTFTRIGKFESRFLHLAFEEEFRRVKGHFGPINSVAFHPDGKSYSSGNVDSE 187
Query: 315 IRLH 318
+R +
Sbjct: 188 LRAY 191
>7292465 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 1326
Score = 75.1 bits (183), Expect = 1e-13
Identities = 63/267 (23%), Positives = 119/267 (43%), Gaps = 33/267 (12%)
Query: 2 RPIVLKGHE-RPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDV 60
+P VLKGH+ +T ++F+ G+ + + S D+ +W A+NG+ L TL H+G +WS +
Sbjct: 986 KPKVLKGHDDHVITCLQFS--GNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQM 1043
Query: 61 DESTTYALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGHIG 120
S ++G D K+W + +G VH++ + +R H+
Sbjct: 1044 --SGNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCM-----------------HLH 1084
Query: 121 SIVVYSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYY 180
V S R+ + ++++ + A V Y+GK I++G D + ++
Sbjct: 1085 GSKVVSGSRDATLRVWDIEQGSCLHVLVGHLAA---VRCVQYDGKLIVSGAYDYMVKIWH 1141
Query: 181 GENGEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTYKADCPLNS 240
E E + + H + +QF D + ++ S D+ + DV+T T L S
Sbjct: 1142 PERQECLHTLQGHTNRVYSLQF--DGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTS 1199
Query: 241 ASITPLKEFVILGGGQDAK----DVTT 263
L++ +++ G D+ D+TT
Sbjct: 1200 G--MELRQNILVSGNADSTVKVWDITT 1224
>SPAC343.04c [S] KOG0293 WD40 repeat-containing protein
Length = 507
Score = 70.5 bits (171), Expect = 3e-12
Identities = 72/315 (22%), Positives = 126/315 (39%), Gaps = 27/315 (8%)
Query: 5 VLKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDEST 64
V H + Q+ ++ +G + + SKD A I+ +N +R+ L H T+ I
Sbjct: 208 VFHDHSDEVWQISYSHNGRYLASASKDKTAIIFDVVNLKRVFRLIGHIDTVAYIRWSPDD 267
Query: 65 TYALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGHIGSIVV 124
Y L+ D +W TG + V + PDG + GS
Sbjct: 268 RYLLSCSCDKSVILWDAFTGEKLRDYKHGFSVSCCCWLPDGLSFIT---------GSPDC 318
Query: 125 YSLIRNENGEIVNVKEEPD-YEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGEN 183
+ + NGEI+ E+ + Y++ TK+++ + + ED I+ Y E
Sbjct: 319 HITHWSLNGEILYKWEDVNIYDMALTSDGTKLYIVGFEQ-----LINAEDKHIAIYSVET 373
Query: 184 GEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTYKADCPLNSASI 243
E ++ + K + I S D Y +T+ L D++ +++ Y
Sbjct: 374 RECIKKISLQSK-VTSICLSKDSKYALTNLEPHTTFLWDLEENRIVRQYMGH-------- 424
Query: 244 TPLKEFVILGGGQDAKDVTTTSAREGKFEARIYHKVFQDEIGRVKGHFGPLNYVAVSPTG 303
L F+I G KD T + + RI+H+ + + GH +NYVA +P
Sbjct: 425 -KLGNFLI-GSCFGGKDDTFVLSGSEDDKIRIWHRESGKLLATLSGHVKCVNYVAYNPVD 482
Query: 304 T-SYASGGEDGYIRL 317
+AS G+D +R+
Sbjct: 483 PYQFASAGDDNTVRI 497
>Hs18544419 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 446
Score = 68.2 bits (165), Expect = 2e-11
Identities = 59/226 (26%), Positives = 89/226 (39%), Gaps = 20/226 (8%)
Query: 7 KGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTTY 66
+GH + + FN LV S D+ A +W NGE + TL HS I S+ + S
Sbjct: 91 RGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDR 150
Query: 67 ALTGGADFCFKIWKVATGVAVH-SVSTRSPVLRVEFSPDGSKLLIVLDAVMGHIGSI-VV 124
+TG D +W TG V+ + + + F+ D S +L GS+
Sbjct: 151 IITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLIL---------TGSMDKT 201
Query: 125 YSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGENG 184
L NG+ V D EI + + Y GK I DG +
Sbjct: 202 CKLWDATNGKCVATLTGHDDEILD---------SCFDYTGKLIATASADGTARIFSAATR 252
Query: 185 EFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLK 230
+ + + HE I I F+P + +T S D A + D T + L+
Sbjct: 253 KCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQ 298
Score = 59.3 bits (142), Expect = 8e-09
Identities = 61/291 (20%), Positives = 114/291 (38%), Gaps = 32/291 (10%)
Query: 29 SKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTTYAL-TGGADFCFKIWKVATGVAV 87
S D +W +GE L TL+ H +++I + + TG D K+W V TG
Sbjct: 28 SYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCY 87
Query: 88 HSVSTRSP-VLRVEFSPDGSKLLIVLDAVMGHIGSIVVYSLIRNENGEIVNVKEEPDYEI 146
H+ + ++ + F+P + + + I +NGE V EI
Sbjct: 88 HTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDI--------QNGEEVYTLRGHSAEI 139
Query: 147 TTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGENGEFVQAKKIHEKSIKDIQFSPDR 206
++ S++ +G II G D + + + G V H I F+ D
Sbjct: 140 ISL---------SFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDC 190
Query: 207 TYFITSSRDSVASLVDVDTFEVLKTYKADCPLNSASITPLKEFVILGGGQDAKDVTTTSA 266
+ +T S D L D + + A++T + ++ + T++
Sbjct: 191 SLILTGSMDKTCKLWDATNGKCV-----------ATLTGHDDEILDSCFDYTGKLIATAS 239
Query: 267 REGKFEARIYHKVFQDEIGRVKGHFGPLNYVAVSPTGTSYASGGEDGYIRL 317
+G ARI+ + I +++GH G ++ ++ +P G +G D R+
Sbjct: 240 ADGT--ARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARI 288
>Hs4758560 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 357
Score = 65.9 bits (159), Expect = 9e-11
Identities = 54/245 (22%), Positives = 97/245 (39%), Gaps = 36/245 (14%)
Query: 6 LKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWS-IDVDEST 64
LKGH + ++ +N DG ++F+ S D ++W + GER+ L H+ + S +S
Sbjct: 105 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARKSP 164
Query: 65 TYALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLLI-------------- 110
TG D K+W + A+ + VL V F+ +++
Sbjct: 165 QLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ 224
Query: 111 --VLDAVMGHIGSIVVYSLIRNENGEIVNVKEEPDYEITTI------EQATKVFV----- 157
+ + GH S+ SL +E +++ + + + E+ K+F
Sbjct: 225 NKLTYTMRGHADSVTGLSL-SSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHN 283
Query: 158 -------ASWSYNGKYIIAGHEDGQISAYYGENGEFVQAKKIHEKSIKDIQFSPDRTYFI 210
SWS +G I AG D + + + + H SI ++ F PD I
Sbjct: 284 FEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIII 343
Query: 211 TSSRD 215
++S D
Sbjct: 344 SASSD 348
>Hs13376840 [R] KOG4155 FOG: WD40 repeat
Length = 305
Score = 65.5 bits (158), Expect = 1e-10
Identities = 50/228 (21%), Positives = 100/228 (42%), Gaps = 18/228 (7%)
Query: 6 LKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTT 65
L+GH+ + V + + + S D+ +W NG+++ ++D W++ +
Sbjct: 60 LEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQ 119
Query: 66 YALTGGADFCFKIWKVATGVAVHSVSTRSP-VLRVEFSPDGSKLLIVLDAVMGHIGSIVV 124
Y TG I+ V +G +S+ TR +L + +SPDG L G I I+
Sbjct: 120 YLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYL------ASGAIDGII- 172
Query: 125 YSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGENG 184
++ G++++ E I ++ ++S + + ++ +DG I Y ++
Sbjct: 173 -NIFDIATGKLLHTLEGHAMPIRSL---------TFSPDSQLLVTASDDGYIKIYDVQHA 222
Query: 185 EFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTY 232
H + ++ F PD T+F++SS D + DV T + T+
Sbjct: 223 NLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTF 270
Score = 62.4 bits (150), Expect = 9e-10
Identities = 71/307 (23%), Positives = 125/307 (40%), Gaps = 45/307 (14%)
Query: 21 DGDLVFACSKDSVASIWYAINGERLG---TLDDHSGTIWSIDVDESTTYALTGGADFCFK 77
+ + V S D + +W ERL +L+ H + S+D+ + A + D +
Sbjct: 31 NSETVVTGSLDDLVKVW-KWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIR 89
Query: 78 IWKVATGVAVHSVSTRSPV--LRVEFSPDGSKLLIVLDAVMGHIGSIVVYSLIRNENGEI 135
+W + G + S+ PV + FSPD L A H+G + ++ + E+G+
Sbjct: 90 LWDLENGKQIKSIDA-GPVDAWTLAFSPDSQYL-----ATGTHVGKVNIFGV---ESGK- 139
Query: 136 VNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGENGEFVQAKKIHEK 195
+Y + T + + ++S +GKY+ +G DG I+ + G+ + + H
Sbjct: 140 ------KEYSLDT--RGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAM 191
Query: 196 SIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTYK--ADCPLNSASITPLKEFVILG 253
I+ + FSPD +T+S D + DV + T A LN A FV
Sbjct: 192 PIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSS 251
Query: 254 GGQDAK--DVTTTSAREGKFEARIYHKVFQDEIGRVKGHFGPLNYVAVSPTGTSYASGGE 311
+ K DV T + F+ QD++ VK + G+ S G+
Sbjct: 252 SDKSVKVWDVGTRTCVHTFFD-------HQDQVWGVK----------YNGNGSKIVSVGD 294
Query: 312 DGYIRLH 318
D I ++
Sbjct: 295 DQEIHIY 301
Score = 55.5 bits (132), Expect = 1e-07
Identities = 58/274 (21%), Positives = 115/274 (41%), Gaps = 37/274 (13%)
Query: 51 HSGTIWSI----DVDESTTYALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGS 106
H IWS+ + E++ +TG D K+WK R L +++S +G
Sbjct: 15 HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWK-----------WRDERLDLQWSLEGH 63
Query: 107 KLLIVLDAVMGHIGSIVVYSLI--RNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNG 164
+L +V + H I S + ++ N K+ + ++ T F S +
Sbjct: 64 QLGVV-SVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAF----SPDS 118
Query: 165 KYIIAGHEDGQISAYYGENGEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVD 224
+Y+ G G+++ + E+G+ + K I I +SPD Y + + D + ++ D+
Sbjct: 119 QYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIA 178
Query: 225 TFEVLKTYKADC-PLNSASITPLKEFVILGGGQDAKDVTTTSAREGKFEARIYHKVFQDE 283
T ++L T + P+ S + +P + ++ T++ +G +IY +
Sbjct: 179 TGKLLHTLEGHAMPIRSLTFSPDSQLLV------------TASDDGYI--KIYDVQHANL 224
Query: 284 IGRVKGHFGPLNYVAVSPTGTSYASGGEDGYIRL 317
G + GH + VA P T + S D +++
Sbjct: 225 AGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKV 258
Score = 53.5 bits (127), Expect = 4e-07
Identities = 31/115 (26%), Positives = 55/115 (46%), Gaps = 1/115 (0%)
Query: 6 LKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTT 65
L+GH P+ + F+ D L+ S D I+ + GTL H+ + ++ T
Sbjct: 186 LEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDT 245
Query: 66 YALTGGADFCFKIWKVATGVAVHS-VSTRSPVLRVEFSPDGSKLLIVLDAVMGHI 119
+ ++ +D K+W V T VH+ + V V+++ +GSK++ V D HI
Sbjct: 246 HFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHI 300
>At3g49660 [R] KOG0266 WD40 repeat-containing protein
Length = 317
Score = 65.5 bits (158), Expect = 1e-10
Identities = 52/247 (21%), Positives = 106/247 (42%), Gaps = 38/247 (15%)
Query: 8 GHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTTYA 67
GHE ++ V F+ D + + S D +W G + TL H+ + ++ + +
Sbjct: 69 GHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMI 128
Query: 68 LTGGADFCFKIWKVATGVAVHSVSTRS-PVLRVEFSPDGSKLLI--------VLDAVMGH 118
++G D +IW V TG + + S PV V+F+ DGS ++ + D+ GH
Sbjct: 129 VSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGH 188
Query: 119 IGSIVVYSLIRNENGEIVNVKEEPDYE---ITTIEQATKVF-VASWSY------------ 162
V +LI +EN + V+ P+ + + T++ +++ ++S +
Sbjct: 189 ----CVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQY 244
Query: 163 ---------NGKYIIAGHEDGQISAYYGENGEFVQAKKIHEKSIKDIQFSPDRTYFITSS 213
NGK I++G ED + + + + +Q + H +++ ++ P + S
Sbjct: 245 CISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGS 304
Query: 214 RDSVASL 220
D +
Sbjct: 305 LDKTVRI 311
Score = 53.1 bits (126), Expect = 6e-07
Identities = 66/326 (20%), Positives = 122/326 (37%), Gaps = 48/326 (14%)
Query: 6 LKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAIN------GERLGTLDDHSGTIWSID 59
L H R ++ VKF+ DG L+ + S D Y IN E + H I +
Sbjct: 20 LTSHNRAVSSVKFSSDGRLLASASADKTIRT-YTINTINDPIAEPVQEFTGHENGISDVA 78
Query: 60 VDESTTYALTGGADFCFKIWKVATGVAVHS-VSTRSPVLRVEFSPDGSKLLIVLDAVMGH 118
+ ++ D K+W V TG + + + + V F+P + + V G
Sbjct: 79 FSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMI------VSGS 132
Query: 119 IGSIV-VYSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQIS 177
V ++ + + +++ +P V ++ +G I++ DG
Sbjct: 133 FDETVRIWDVTTGKCLKVLPAHSDP------------VTAVDFNRDGSLIVSSSYDGLCR 180
Query: 178 AYYGENGEFVQAKKIHEK-SIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTYKAD- 235
+ G V+ E + ++FSP+ + + + D+ L ++ + + LKTY
Sbjct: 181 IWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHV 240
Query: 236 ----CPLNSASITPLKEFVILGGGQDAKDVTTTSAREGKFEARIYHKVFQDEIGRVKGHF 291
C ++ S+T K V G + V K + +++GH
Sbjct: 241 NAQYCISSAFSVTNGKRIV---SGSEDNCVHMWELNSKKL------------LQKLEGHT 285
Query: 292 GPLNYVAVSPTGTSYASGGEDGYIRL 317
+ VA PT ASG D +R+
Sbjct: 286 ETVMNVACHPTENLIASGSLDKTVRI 311
>Hs16117781 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 707
Score = 65.1 bits (157), Expect = 1e-10
Identities = 68/274 (24%), Positives = 126/274 (45%), Gaps = 33/274 (12%)
Query: 3 PIVLKGHE-RPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVD 61
P VLKGH+ +T ++F G+ + + S D+ +W A+ G+ L TL H+G +WS +
Sbjct: 373 PKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR 430
Query: 62 ESTTYALTGGADFCFKIWKVATGVAVHSVSTRSPVLR---------VEFSPDGSKLL--- 109
++ ++G D K+W TG +H++ + +R V S D + +
Sbjct: 431 DN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDI 488
Query: 110 ---IVLDAVMGHIGSI--VVYSLIRNENGE---IVNVKE-EPDYEITTIEQATKVFVASW 160
L +MGH+ ++ V Y R +G +V V + E + + T++ T V S
Sbjct: 489 ETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTN-RVYSL 547
Query: 161 SYNGKYIIAGHEDGQISAYYGENGEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASL 220
++G ++++G D I + E G + H+ ++ + ++ + DS +
Sbjct: 548 QFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKI 605
Query: 221 VDVDTFEVLKTYKADCPLNSASITPL---KEFVI 251
D+ T + L+T + SA +T L K FVI
Sbjct: 606 WDIKTGQCLQTLQGPNKHQSA-VTCLQFNKNFVI 638
>Hs16117779 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 627
Score = 65.1 bits (157), Expect = 1e-10
Identities = 68/274 (24%), Positives = 126/274 (45%), Gaps = 33/274 (12%)
Query: 3 PIVLKGHE-RPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVD 61
P VLKGH+ +T ++F G+ + + S D+ +W A+ G+ L TL H+G +WS +
Sbjct: 293 PKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR 350
Query: 62 ESTTYALTGGADFCFKIWKVATGVAVHSVSTRSPVLR---------VEFSPDGSKLL--- 109
++ ++G D K+W TG +H++ + +R V S D + +
Sbjct: 351 DN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDI 408
Query: 110 ---IVLDAVMGHIGSI--VVYSLIRNENGE---IVNVKE-EPDYEITTIEQATKVFVASW 160
L +MGH+ ++ V Y R +G +V V + E + + T++ T V S
Sbjct: 409 ETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTN-RVYSL 467
Query: 161 SYNGKYIIAGHEDGQISAYYGENGEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASL 220
++G ++++G D I + E G + H+ ++ + ++ + DS +
Sbjct: 468 QFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKI 525
Query: 221 VDVDTFEVLKTYKADCPLNSASITPL---KEFVI 251
D+ T + L+T + SA +T L K FVI
Sbjct: 526 WDIKTGQCLQTLQGPNKHQSA-VTCLQFNKNFVI 558
>7299285 [R] KOG4155 FOG: WD40 repeat
Length = 331
Score = 65.1 bits (157), Expect = 1e-10
Identities = 52/229 (22%), Positives = 95/229 (40%), Gaps = 19/229 (8%)
Query: 6 LKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTT 65
LKGH + V + DG + + S DS +W A +G++ L +W++
Sbjct: 81 LKGHALGVVSVAVSSDGQTIASSSLDSTMCLWDARSGDKKHLLSFGPVDLWTVQFSPCNK 140
Query: 66 YALTGGADFCFKIWKVATGVAVHSVSTRSP--VLRVEFSPDGSKLLIVLDAVMGHIGSIV 123
Y ++G D ++ V TG A ++ ++ L + +SPDG + G I I+
Sbjct: 141 YVISGLNDGKISMYSVETGKAEQTLDAQNGKYTLSIAYSPDGKYI------ASGAIDGII 194
Query: 124 VYSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGEN 183
++ G++V E A V +S N + ++ +DG + Y +
Sbjct: 195 --TIFDVAAGKVVQTLE---------GHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVTH 243
Query: 184 GEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTY 232
+ V H + + FS D +F +SS D+ + D + L T+
Sbjct: 244 SDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLHTF 292
Score = 57.4 bits (137), Expect = 3e-08
Identities = 41/165 (24%), Positives = 75/165 (44%), Gaps = 16/165 (9%)
Query: 155 VFVASWSYNGKYIIAGHEDGQISAYYGENGEFVQAKKIHE-KSIKDIQFSPDRTYFITSS 213
++ +S KY+I+G DG+IS Y E G+ Q K I +SPD Y + +
Sbjct: 130 LWTVQFSPCNKYVISGLNDGKISMYSVETGKAEQTLDAQNGKYTLSIAYSPDGKYIASGA 189
Query: 214 RDSVASLVDVDTFEVLKTYKADC-PLNSASITPLKEFVILGGGQDAKDVTTTSAREGKFE 272
D + ++ DV +V++T + P+ S +P + ++ T++ +G
Sbjct: 190 IDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLL------------TASDDGHM- 236
Query: 273 ARIYHKVFQDEIGRVKGHFGPLNYVAVSPTGTSYASGGEDGYIRL 317
++Y D +G + GH + VA S G +AS D +++
Sbjct: 237 -KLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKI 280
>Hs16554627 [R] KOG0266 WD40 repeat-containing protein
Length = 334
Score = 64.7 bits (156), Expect = 2e-10
Identities = 59/267 (22%), Positives = 112/267 (41%), Gaps = 51/267 (19%)
Query: 6 LKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTT 65
+ GH+ ++ V ++ D +L+ + S D IW +G+ L TL HS ++ + + +
Sbjct: 83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN 142
Query: 66 YALTGGADFCFKIWKVATGVAVHSVSTRS-PVLRVEFSPDGSKLLIV------LDAVMGH 118
++G D +IW V TG + ++ S PV V F+ DGS LIV L +
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGS--LIVSSSYDGLCRIWDT 200
Query: 119 IGSIVVYSLIRNENGEIVNVKEEPDYE---ITTIEQATKVFVASWSYN------------ 163
+ +LI ++N + VK P+ + T++ K+ W Y+
Sbjct: 201 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL----WDYSKGKCLKTYTGHK 256
Query: 164 --------------GKYIIAGHEDGQISAYYGENGEFVQAKKIHEKSIKDIQFSPDRTYF 209
GK+I++G ED + + + E VQ + H + P
Sbjct: 257 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHP----- 311
Query: 210 ITSSRDSVASLVDVDTFEVLKTYKADC 236
+++ + ++ + +K +K+DC
Sbjct: 312 ----TENIIASAALENDKTIKLWKSDC 334
Score = 55.5 bits (132), Expect = 1e-07
Identities = 50/229 (21%), Positives = 99/229 (42%), Gaps = 19/229 (8%)
Query: 6 LKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTT 65
L GH + ++ VKF+ +G+ + + S D + IW A +G+ T+ H I + +
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 66 YALTGGADFCFKIWKVATGVAVHSVSTRSP-VLRVEFSPDGSKLLIVLDAVMGHIGSIVV 124
++ D KIW V++G + ++ S V F+P S ++
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ----------------SNLI 144
Query: 125 YSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGENG 184
S +E+ I +VK + T + V ++ +G I++ DG + +G
Sbjct: 145 VSGSFDESVRIWDVKTGKCLK-TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Query: 185 EFVQAKKIHEK-SIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTY 232
+ ++ + + ++FSP+ Y + ++ D+ L D + LKTY
Sbjct: 204 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTY 252
>Hs13629793 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 357
Score = 63.9 bits (154), Expect = 3e-10
Identities = 53/245 (21%), Positives = 95/245 (38%), Gaps = 36/245 (14%)
Query: 6 LKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWS-IDVDEST 64
LKGH + ++ +N DG ++F+ S D ++W + GER+ L H+ + S
Sbjct: 105 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGP 164
Query: 65 TYALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLLI-------------- 110
TG D K+W + A+ + VL V F+ +++
Sbjct: 165 QLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ 224
Query: 111 --VLDAVMGHIGSIVVYSLIRNENGEIVNVKEEPDYEITTI------EQATKVFV----- 157
+ + GH S+ SL +E +++ + + + E+ K+F
Sbjct: 225 NKLTYTMRGHADSVTGLSL-SSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHN 283
Query: 158 -------ASWSYNGKYIIAGHEDGQISAYYGENGEFVQAKKIHEKSIKDIQFSPDRTYFI 210
SWS +G I AG D + + + + H SI ++ F PD I
Sbjct: 284 FEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIII 343
Query: 211 TSSRD 215
++S D
Sbjct: 344 SASSD 348
>SPAC18B11.10 [R] KOG0266 WD40 repeat-containing protein
Length = 614
Score = 63.2 bits (152), Expect = 6e-10
Identities = 50/221 (22%), Positives = 97/221 (43%), Gaps = 8/221 (3%)
Query: 5 VLKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDEST 64
V GHE+ + + F+ +G + + S D A +W G+ + L+ +G + +I + +
Sbjct: 397 VFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENG-VTAIAISPND 455
Query: 65 TYALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLLI-VLDAVMGHIGSIV 123
+ G D ++W V+ + + V + FSPD S LL LD +I
Sbjct: 456 QFIAVGSLDQIIRVWSVSGTLVERLEGHKESVYSIAFSPDSSILLSGSLDK------TIK 509
Query: 124 VYSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGEN 183
V+ L + + +K E + T V + S + ++ ++G +D + + +
Sbjct: 510 VWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQT 569
Query: 184 GEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVD 224
G+ + H+ S+ + FSPD F + S D A + +D
Sbjct: 570 GQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWSID 610
Score = 50.1 bits (118), Expect = 5e-06
Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 15/159 (9%)
Query: 159 SWSYNGKYIIAGHEDGQISAYYGENGEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVA 218
++S +GKY++ G ED QI + + HE+ I + FS + + ++ S D A
Sbjct: 367 AFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTA 426
Query: 219 SLVDVDTFEVLKTYKADCPLNSASITPLKEFVILGGGQDAKDVTTTSAREGKFEARIYHK 278
L DV+T + + + + + + +I+P +F+ +G V + S
Sbjct: 427 RLWDVETGQCILKLEIENGVTAIAISPNDQFIAVGSLDQIIRVWSVSG------------ 474
Query: 279 VFQDEIGRVKGHFGPLNYVAVSPTGTSYASGGEDGYIRL 317
+ R++GH + +A SP + SG D I++
Sbjct: 475 ---TLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKV 510
>7303694 [A] KOG0291 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 949
Score = 62.8 bits (151), Expect = 7e-10
Identities = 57/245 (23%), Positives = 104/245 (42%), Gaps = 30/245 (12%)
Query: 91 STRSPVLRVEFSPDGSKLLIVLDAVMGHIGSIVVY--------------SLIRNENGEIV 136
+TR+ VL V FS L + D M H SI Y +L E G+++
Sbjct: 317 NTRTKVLVVAFSSGAFYLYELPDVNMIHSLSISDYPISAALFNCTGDWVALASREIGQLL 376
Query: 137 NVK-EEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGENGEFVQAKKIHEK 195
+ + Y + ++++ ++S +G++I G ED ++ + ++ H
Sbjct: 377 VWEWQSEQYIMKQQGHSSEMTCIAYSSDGQFIATGGEDSKVKLWNTQSSFCFVTFSEHTS 436
Query: 196 SIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTYKADCPLN-SASITPLKEFVILGG 254
+ IQFS ++ + ++SS D DV+ + +T+ + P S +++ G
Sbjct: 437 GVTGIQFSRNKKFLVSSSLDGTVRAFDVNRYRNFRTFTSPNPAQFSCVAVDYSGELVVAG 496
Query: 255 GQDAKDVTTTSAREGKFEARIYHKVFQDEIGRVKGHFGPLNYVAVSPTGTS--YASGGED 312
GQD D+ S + GK + + GH GP+ +A SP TS SG D
Sbjct: 497 GQDVFDIFLWSVKTGKL------------LEIISGHEGPVVSIAFSPVATSSTLVSGSWD 544
Query: 313 GYIRL 317
+++
Sbjct: 545 KTVKI 549
>Hs16445438 [R] KOG0644 Uncharacterized conserved protein contains WD40 repeat
and BROMO domains
Length = 2269
Score = 61.6 bits (148), Expect = 2e-09
Identities = 57/219 (26%), Positives = 90/219 (41%), Gaps = 14/219 (6%)
Query: 8 GHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTTYA 67
GH + V F+R G +F S D + IW NG L TL HS I + V+ T
Sbjct: 184 GHLSAVYCVAFDRTGHRIFTGSDDCLVKIWSTHNGRLLSTLRGHSAEISDMAVNYENTMI 243
Query: 68 LTGGADFCFKIW--KVATGVAVHSVSTRSPVLRVEFSP--DGSKLLIVLDAVMGHIGSIV 123
G D ++W + VAV T S + ++FSP GS+ +V G G++
Sbjct: 244 AAGSCDKIIRVWCLRTCAPVAVLQGHTGS-ITSLQFSPMAKGSQRYMV---STGADGTVC 299
Query: 124 VYSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYY--G 181
+ + E + P ++ +S+S G ++ G D I Y+
Sbjct: 300 FWQW----DLESLKFSPRPLKFTEKPRPGVQMLCSSFSVGGMFLATGSTDHVIRMYFLGF 355
Query: 182 ENGEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASL 220
E E + + H + IQF + F++ SRD A +
Sbjct: 356 EAPEKIAELESHTDKVDSIQFCNNGDRFLSGSRDGTARI 394
>Hs16445436 [R] KOG0644 Uncharacterized conserved protein contains WD40 repeat
and BROMO domains
Length = 2320
Score = 61.6 bits (148), Expect = 2e-09
Identities = 57/219 (26%), Positives = 90/219 (41%), Gaps = 14/219 (6%)
Query: 8 GHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTTYA 67
GH + V F+R G +F S D + IW NG L TL HS I + V+ T
Sbjct: 184 GHLSAVYCVAFDRTGHRIFTGSDDCLVKIWSTHNGRLLSTLRGHSAEISDMAVNYENTMI 243
Query: 68 LTGGADFCFKIW--KVATGVAVHSVSTRSPVLRVEFSP--DGSKLLIVLDAVMGHIGSIV 123
G D ++W + VAV T S + ++FSP GS+ +V G G++
Sbjct: 244 AAGSCDKIIRVWCLRTCAPVAVLQGHTGS-ITSLQFSPMAKGSQRYMV---STGADGTVC 299
Query: 124 VYSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYY--G 181
+ + E + P ++ +S+S G ++ G D I Y+
Sbjct: 300 FWQW----DLESLKFSPRPLKFTEKPRPGVQMLCSSFSVGGMFLATGSTDHVIRMYFLGF 355
Query: 182 ENGEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASL 220
E E + + H + IQF + F++ SRD A +
Sbjct: 356 EAPEKIAELESHTDKVDSIQFCNNGDRFLSGSRDGTARI 394
>ECU01g0610 [BK] KOG1063 RNA polymerase II elongator complex subunit ELP2 WD
repeat superfamily
Length = 680
Score = 61.6 bits (148), Expect = 2e-09
Identities = 47/189 (24%), Positives = 87/189 (45%), Gaps = 22/189 (11%)
Query: 130 NENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAY-YGENGEFVQ 188
N E+++ EE DY I + +S +G+Y+ A +D +S Y G++ + +
Sbjct: 476 NRAFELIDYIEEHDYGIERLV---------FSRDGRYLAAASKDRTVSVYNVGKDIKLAR 526
Query: 189 AKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTYKADCPLNSASITPLKE 248
K H + + D FS D Y T SRD + ++ V + DC S +P +
Sbjct: 527 RLKDHRRIVWDCSFSHDSKYLATCSRDKSVLVYELPELRVKYMSRFDCEATSLCFSPREY 586
Query: 249 FVILGGGQDAKDVTTTSAREGKFEARIYHKVFQDEIGRVKGHFGPLNYVAVSPTGTSYAS 308
+++ G ++ DV + R+G+ + K R + H +N V+ + G+ A+
Sbjct: 587 LLVV--GLESGDVVSLGFRKGEL---VVWK-------RSREHGRQVNVVSFNEDGSRCAT 634
Query: 309 GGEDGYIRL 317
GG DG +++
Sbjct: 635 GGADGMVKV 643
>Hs7706657 [S] KOG0282 mRNA splicing factor
Length = 579
Score = 61.2 bits (147), Expect = 2e-09
Identities = 61/268 (22%), Positives = 108/268 (39%), Gaps = 40/268 (14%)
Query: 5 VLKGHERPLTQVK-FNRDGDLVFACSKDSVASIWYAINGER--LGTLDDHSGTIWSIDVD 61
V GH + ++ V+ F G L+ +CS D +W + GER L T HS + I +
Sbjct: 283 VWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLW-EVYGERRCLRTFIGHSKAVRDICFN 341
Query: 62 ESTTYALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVEFSPD-----------GSKLLI 110
+ T L+ D K+W TG + + R V+F+PD K ++
Sbjct: 342 TAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIV 401
Query: 111 VLDAVMG--------HIGSIVVYSLIRNENGEIVNVKEEP-----------DYEITTIEQ 151
D G H+G++ + +EN V+ ++ D++
Sbjct: 402 QWDIRSGEIVQEYDRHLGAVNTIVFV-DENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPS 460
Query: 152 ATKVFVASWSYNGKYIIAGHEDGQISAYYGENGEFVQAKKIHEKSIK-----DIQFSPDR 206
+ + S NGK++ D QI + +N + KKI + + + FSPD
Sbjct: 461 MHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDM 520
Query: 207 TYFITSSRDSVASLVDVDTFEVLKTYKA 234
+Y I+ + ++ D T ++ +KA
Sbjct: 521 SYVISGDGNGKLNIWDWKTTKLYSRFKA 548
>Hs9506645 [R] KOG0266 WD40 repeat-containing protein
Length = 330
Score = 60.8 bits (146), Expect = 3e-09
Identities = 54/226 (23%), Positives = 97/226 (42%), Gaps = 46/226 (20%)
Query: 6 LKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTT 65
L GH ++ V ++ D + + S D +W +G+ L TL HS ++ + + +
Sbjct: 79 LYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPPSN 138
Query: 66 YALTGGADFCFKIWKVATGVAVHSVSTRS-PVLRVEFSPDGSKLLI--------VLDAVM 116
++G D KIW+V TG + ++S S PV V F+ GS ++ + DA
Sbjct: 139 LIISGSFDETVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAAS 198
Query: 117 GHIGSIVVYSLIRNENGEIVNVKEEPD--YEIT-TIEQATKVFVASWSYN---------- 163
G + +L+ ++N + VK P+ Y +T T++ K+ W Y+
Sbjct: 199 GQ----CLKTLVDDDNPPVSFVKFSPNGKYILTATLDNTLKL----WDYSRGRCLKTYTG 250
Query: 164 ----------------GKYIIAGHEDGQISAYYGENGEFVQAKKIH 193
GK+I++G ED + + + E VQ + H
Sbjct: 251 QKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 296
Score = 57.4 bits (137), Expect = 3e-08
Identities = 52/229 (22%), Positives = 100/229 (42%), Gaps = 19/229 (8%)
Query: 6 LKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTT 65
L GH ++ VKF+ +G+ + + S D + IW A +G+ TL H+ I + ++
Sbjct: 37 LVGHTEAVSSVKFSPNGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDSS 96
Query: 66 YALTGGADFCFKIWKVATGVAVHSVSTRSP-VLRVEFSPDGSKLLIVLDAVMGHIGSIVV 124
++ D K+W V +G + ++ S V F+P + ++ GS
Sbjct: 97 RLVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLII---------SGSF-- 145
Query: 125 YSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGENG 184
+E +I VK + T + V ++ +G I++G DG + +G
Sbjct: 146 -----DETVKIWEVKTGKCLK-TLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASG 199
Query: 185 EFVQAKKIHEK-SIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTY 232
+ ++ + + ++FSP+ Y +T++ D+ L D LKTY
Sbjct: 200 QCLKTLVDDDNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTY 248
>CE00901 [R] KOG0266 WD40 repeat-containing protein
Length = 376
Score = 60.8 bits (146), Expect = 3e-09
Identities = 55/253 (21%), Positives = 110/253 (42%), Gaps = 21/253 (8%)
Query: 6 LKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTT 65
L GH+ + + ++ D V + S D I+ + TL H+ ++ + + ++
Sbjct: 125 LTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSS 184
Query: 66 YALTGGADFCFKIWKVATGVAVHSVSTRS-PVLRVEFSPDGSKLLIVLDAVMGHIGSIVV 124
++G D +IW V TG+ + ++ S PV V F+ DGS L A + G + +
Sbjct: 185 LVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGS-----LIASGSYDGLVRI 239
Query: 125 YSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGENG 184
+ NG+ + + ++ V +S NGKYI+A + D + + G
Sbjct: 240 WD---TANGQCIKTLVD--------DENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKG 288
Query: 185 EFVQAKKIHEKSIKDI--QFS-PDRTYFITSSRDSVASLVDVDTFEVLKTYKADC-PLNS 240
+ ++ HE S I FS + I+ S D + ++ T E+++ + P+ +
Sbjct: 289 KTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLA 348
Query: 241 ASITPLKEFVILG 253
+ P++ + G
Sbjct: 349 SDCHPVQNIIASG 361
>SPBC1289.11 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 340
Score = 60.5 bits (145), Expect = 4e-09
Identities = 51/254 (20%), Positives = 109/254 (42%), Gaps = 35/254 (13%)
Query: 5 VLKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDEST 64
VL G + +T ++++RD +V+ S D+ W A++G+++ H+G + ++DV +
Sbjct: 88 VLNGCKGAITDLQWSRDSRVVYCSSSDTHLMSWDAVSGQKIRKHKGHAGVVNALDVLKVG 147
Query: 65 TYALTGGADFC-FKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLLI--------VLDAV 115
+ LT +D C K+W + + ++ + P+ V + G+++ I + D
Sbjct: 148 SELLTSVSDDCTMKVWDSRSKDCIKTIEEKYPLTAVAIAQQGTQVFIGGIDGAIKIWDLR 207
Query: 116 MGHIGSI------VVYSLIRNENG------------EIVNVK-------EEPDYEITTIE 150
H + ++ SL +++G I +VK + +E
Sbjct: 208 NNHCSHVLKGHKDIITSLAISKDGSSLLSNSMDNTVRIFDVKPFASAQRQLQIFEGAIHG 267
Query: 151 QATKVFVASWSYNGKYIIAGHEDGQISAYYGENGEFVQAKKIHEKSIKDIQFSPDRTYFI 210
Q + +WS N +++ AG D + + G+ HE S+ + F P + +
Sbjct: 268 QEHNLLGVAWSRNSRFVGAGSSDKNVYV-WSATGDLRYVLPGHEGSVNHVDFHPHQDIIL 326
Query: 211 TSSRDSVASLVDVD 224
+ S D L +++
Sbjct: 327 SCSSDRTIFLGELN 340
>CE11748 [R] KOG0266 WD40 repeat-containing protein
Length = 395
Score = 60.5 bits (145), Expect = 4e-09
Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 16/194 (8%)
Query: 6 LKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTT 65
LKGH + FN G L+ + S D IW A NG + ++ H + S+ +
Sbjct: 186 LKGHTNYVFCCCFNPSGTLIASGSFDETIRIWCARNGNTIFSIPGHEDPVSSVCFNRDGA 245
Query: 66 YALTGGADFCFKIWKVATGVAVHSV--STRSPVLRVEFSPDGSKLLIVLDAVMGHIGSIV 123
Y +G D +IW TG V ++ P+ V+FSP+G +L + + + +
Sbjct: 246 YLASGSYDGIVRIWDSTTGTCVKTLIDEEHPPITHVKFSPNGK---YILASNLNNTLKLW 302
Query: 124 VYSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGEN 183
Y +R +KE +E + A V GK+I++G ED ++ + +
Sbjct: 303 DYQKLR-------VLKEYTGHENSKYCVAANFSVT----GGKWIVSGSEDHKVYIWNLQT 351
Query: 184 GEFVQAKKIHEKSI 197
E +Q H ++
Sbjct: 352 REILQTLDGHNTAV 365
>7290331 [R] KOG0266 WD40 repeat-containing protein
Length = 361
Score = 60.5 bits (145), Expect = 4e-09
Identities = 50/226 (22%), Positives = 96/226 (42%), Gaps = 38/226 (16%)
Query: 6 LKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTT 65
+ GH+ ++ V ++ D L+ + S D +W G+ L TL HS ++ + + +
Sbjct: 110 ISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSN 169
Query: 66 YALTGGADFCFKIWKVATGVAVHSVSTRS-PVLRVEFSPDGSKLLIV----LDAVMGHIG 120
++G D +IW V TG + ++ S PV V F+ DGS ++ L +
Sbjct: 170 LIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 229
Query: 121 SIVVYSLIRNENGEIVNVKEEPDYEI---TTIEQATKVFVASWSYN-------------- 163
+ +LI ++N + VK P+ + T++ K+ W Y+
Sbjct: 230 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL----WDYSKGKCLKTYTGHKNE 285
Query: 164 ------------GKYIIAGHEDGQISAYYGENGEFVQAKKIHEKSI 197
GK+I++G ED + + ++ E VQ + H ++
Sbjct: 286 KYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTV 331
Score = 57.0 bits (136), Expect = 4e-08
Identities = 49/229 (21%), Positives = 102/229 (44%), Gaps = 19/229 (8%)
Query: 6 LKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTT 65
L GH + ++ VKF+ +G+ + + S D + IW A +G+ T+ H I + +
Sbjct: 68 LAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 127
Query: 66 YALTGGADFCFKIWKVATGVAVHSVSTRSP-VLRVEFSPDGSKLLIVLDAVMGHIGSIVV 124
++G D K+W+++TG ++ ++ S V F+P S ++
Sbjct: 128 LLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQ----------------SNLI 171
Query: 125 YSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGENG 184
S +E+ I +V+ + T + V ++ +G I++ DG + +G
Sbjct: 172 VSGSFDESVRIWDVRTGKCLK-TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 230
Query: 185 EFVQAKKIHEK-SIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTY 232
+ ++ + + ++FSP+ Y + ++ D+ L D + LKTY
Sbjct: 231 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTY 279
>At5g67320 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 613
Score = 59.7 bits (143), Expect = 6e-09
Identities = 58/256 (22%), Positives = 102/256 (39%), Gaps = 35/256 (13%)
Query: 11 RPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTTYALTG 70
+ +T + +N +G L+ S D A IW +NGE + TL H G I+S+ ++ Y LTG
Sbjct: 325 KDVTTLDWNGEGTLLATGSCDGQARIW-TLNGELISTLSKHKGPIFSLKWNKKGDYLLTG 383
Query: 71 GADFCFKIWKVATGVAVHSVSTRS-PVLRVEFSPDGSKLLIVLDAV--MGHIGSIVVYSL 127
D +W V S P L V++ + S D++ + IG
Sbjct: 384 SVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDSMIYLCKIGETRPAKT 443
Query: 128 IRNENGEIVNVKEEP------------DYEITTIEQAT----------KVFVASWSYNGK 165
GE+ VK +P +I I+Q+T +++ WS G
Sbjct: 444 FTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGP 503
Query: 166 ---------YIIAGHEDGQISAYYGENGEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDS 216
+ + D + + E G+ + + H + + + FSP+ Y + S D
Sbjct: 504 GTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDK 563
Query: 217 VASLVDVDTFEVLKTY 232
+ + +++KTY
Sbjct: 564 SIHIWSIKEGKIVKTY 579
>7302979 [S] KOG0295 WD40 repeat-containing protein
Length = 411
Score = 59.7 bits (143), Expect = 6e-09
Identities = 53/239 (22%), Positives = 97/239 (40%), Gaps = 15/239 (6%)
Query: 6 LKGHERPLTQVKFNRDGDLVFACSKDSVASIW-YAINGERLGTLDDHSGTIWSIDVDEST 64
LKGH + V F+ G L+ +CS D +W + + E + T+ H + S+ +
Sbjct: 146 LKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAG 205
Query: 65 TYALTGGADFCFKIWKVATGVAVHS-VSTRSPVLRVEFSPDGSKLLIVLDAVMGHIGSIV 123
Y L+ D K+W+VATG V + R V V +GS + A + +I
Sbjct: 206 DYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGS-----IFATCSNDQTIR 260
Query: 124 VYSL--------IRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQ 175
V+ +R+ + + P+ + I +A + G ++ +G D
Sbjct: 261 VWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKT 320
Query: 176 ISAYYGENGEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTYKA 234
I + G + H+ ++ + F P Y +++S D + D+ +KT A
Sbjct: 321 IRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYA 379
>At4g02730 [R] KOG0266 WD40 repeat-containing protein
Length = 333
Score = 58.5 bits (140), Expect = 1e-08
Identities = 69/336 (20%), Positives = 132/336 (38%), Gaps = 53/336 (15%)
Query: 6 LKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTT 65
L+GH ++ VKF+ DG+L+ + S D +W A N + + HS I + +
Sbjct: 39 LEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSH 98
Query: 66 YALTGGADFCFKIWKVATGVAVHSV--STRSPVLRVEFSPDGSKLLIVLDAVMGHIGSIV 123
Y + D +IW + V + V V F+P +
Sbjct: 99 YTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSN----------------- 141
Query: 124 VYSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYN--GKYIIAGHEDGQISAYYG 181
++ E + + E + + +A + ++S +N G I++ DG +
Sbjct: 142 --LIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDA 199
Query: 182 ENGEFVQAKKIHEKS--IKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTY-----KA 234
+ G ++ I +KS + +FSP+ + + ++ DS L + T + LK Y K
Sbjct: 200 KEGTCLKT-LIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKV 258
Query: 235 DCPLNSASITPLKEFVILGGGQDAKDVTTTSAREGKFEARIYHKVFQDEIGRVKGHFGPL 294
C ++ S+T K +++ G + + AR + + R++GH +
Sbjct: 259 FCITSAFSVTNGK-YIVSGSEDNCVYLWDLQAR--------------NILQRLEGHTDAV 303
Query: 295 NYVAVSPTGTSYASGGEDGYIRLHHFDKSYFDFKYD 330
V+ P +S G +H DK+ +K D
Sbjct: 304 ISVSCHPVQNEISSSG-------NHLDKTIRIWKQD 332
Score = 55.5 bits (132), Expect = 1e-07
Identities = 48/203 (23%), Positives = 86/203 (41%), Gaps = 18/203 (8%)
Query: 5 VLKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDEST 64
VL+GH + V FN +L+ + S D IW G+ + + HS I S+ +
Sbjct: 123 VLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDG 182
Query: 65 TYALTGGADFCFKIWKVATGVAVHS-VSTRSPVLR-VEFSPDGSKLLI-VLDAVMGHIGS 121
+ ++ D KIW G + + + +SP + +FSP+G +L+ LD+ +
Sbjct: 183 SLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTL----- 237
Query: 122 IVVYSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYG 181
L G+ + V ++ I A V NGKYI++G ED + +
Sbjct: 238 ----KLSNYATGKFLKVYTGHTNKVFCITSAFSV------TNGKYIVSGSEDNCVYLWDL 287
Query: 182 ENGEFVQAKKIHEKSIKDIQFSP 204
+ +Q + H ++ + P
Sbjct: 288 QARNILQRLEGHTDAVISVSCHP 310
>YBR198c [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 798
Score = 58.2 bits (139), Expect = 2e-08
Identities = 45/182 (24%), Positives = 75/182 (40%), Gaps = 15/182 (8%)
Query: 137 NVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGENGEFVQAKKIHEKS 196
N K+E T + + V+ S+S + KY+++G ED + + + + + K H
Sbjct: 510 NDKDEDPTCKTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHP 569
Query: 197 IKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTYKADC-PLNSASITPLKEFVILGGG 255
+ D+ FSP YF T+S D A L D L+ + ++ S P +V G
Sbjct: 570 VWDVSFSPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSS 629
Query: 256 QDAKDVTTTSAREGKFEARIYHKVFQDEIGRVKGHFGPLNYVAVSPTGTSYASGGEDGYI 315
R++ D + GH P+ +AV P G ++G EDG I
Sbjct: 630 DKT--------------CRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGII 675
Query: 316 RL 317
+
Sbjct: 676 NV 677
>Hs5032159 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 577
Score = 58.2 bits (139), Expect = 2e-08
Identities = 50/229 (21%), Positives = 93/229 (39%), Gaps = 16/229 (6%)
Query: 9 HERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTTYAL 68
H+ P+ +K+NR G+ + + D IW A GE HS +D +TT+A
Sbjct: 328 HKGPIFALKWNRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFA- 386
Query: 69 TGGADFCFKIWKVATGVAVHSVSTR-SPVLRVEFSPDGSKLLIVLDAVMGHIGSI---VV 124
+ D C + ++ V + + V +++ P G L D + I S+ V
Sbjct: 387 SCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVC 446
Query: 125 YSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGENG 184
++ N EI +K P T+ + + +AS S+ D + + E G
Sbjct: 447 IHDLQAHNKEIYTIKWSPTGPATS-NPNSNIMLASASF----------DSTVRLWDIERG 495
Query: 185 EFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTYK 233
H++ + + FSPD Y + S D + + + ++ +Y+
Sbjct: 496 VCTHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGNLVHSYR 544
>Hs4557741 [S] KOG0295 WD40 repeat-containing protein
Length = 410
Score = 58.2 bits (139), Expect = 2e-08
Identities = 44/233 (18%), Positives = 91/233 (38%), Gaps = 4/233 (1%)
Query: 6 LKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTT 65
LKGH + + F+ G L+ +CS D +W E + T+ H + S+ + +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD 205
Query: 66 YALTGGADFCFKIWKVATGVAVHS-VSTRSPVLRVEFSPDGSKLLIVLDAVMGHIGSIVV 124
+ ++ D K+W+V TG V + R V V + DG+ + + + +
Sbjct: 206 HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Query: 125 YSL---IRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYG 181
+R + + P+ ++I +AT G ++++G D I +
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325
Query: 182 ENGEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTYKA 234
G + H+ ++ + F + ++ + D + D +KT A
Sbjct: 326 STGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 378
>Hs14150114 [S] KOG0316 Conserved WD40 repeat-containing protein
Length = 315
Score = 57.4 bits (137), Expect = 3e-08
Identities = 56/219 (25%), Positives = 84/219 (37%), Gaps = 20/219 (9%)
Query: 16 VKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTTYALTGGADFC 75
V+FN DG+ C D +W + G L T H + + +GG D
Sbjct: 31 VRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSSLCSGGGDKA 90
Query: 76 FKIWKVATGVAVHSVSTRS-PVLRVEFSPDGSKLLIVLDAVMGHIGSIVVYSLIRNENGE 134
+W VA+G V + V V+F+ + + +L G I S + R+ E
Sbjct: 91 VVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVIL------SGSIDSSIRCWDCRSRRPE 144
Query: 135 IVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGENGEFVQAKKIHE 194
V +E + V+S + I+AG DG++ Y G+
Sbjct: 145 PVQTLDE-----------ARDGVSSVKVSDHEILAGSVDGRVRRYDLRMGQLF--SDYVG 191
Query: 195 KSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTYK 233
I FS D + SS DS L+D DT E+L YK
Sbjct: 192 SPITCTCFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYK 230
>YBR175w [R] KOG0266 WD40 repeat-containing protein
Length = 315
Score = 57.0 bits (136), Expect = 4e-08
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 11/120 (9%)
Query: 8 GHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTTYA 67
GH P+ + FNR G+L+F S D IW +NG + T+ HS + S+DV + +
Sbjct: 94 GHTAPVISLTFNRKGNLLFTSSMDESIKIWDTLNGSLMKTISAHSEAVVSVDVPMNDSSI 153
Query: 68 LTGGA-DFCFKIWKVATGVAVHSVSTRS---------PVLRVEFSPDGSKLLI-VLDAVM 116
L+ G+ D +I+ TG + +++ P+ +V+FS + LL+ LD V+
Sbjct: 154 LSSGSYDGLIRIFDAETGHCLKTLTYDKDWKRENGVVPISQVKFSENARYLLVKSLDGVV 213
>CE27713 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 331
Score = 57.0 bits (136), Expect = 4e-08
Identities = 61/320 (19%), Positives = 127/320 (39%), Gaps = 24/320 (7%)
Query: 4 IVLKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAING-ERLGTLDDHSGTIWSIDVDE 62
+VL+GH + +F+ DG + + D +W E L H G I + +
Sbjct: 30 MVLQGHGGEIYTSQFSSDGSFLASAGYDQQIFLWNVFGECENFAVLKGHKGAIMEVKFNA 89
Query: 63 STTYALTGGADFCFKIWKVATGVAVHSVSTRSPVLR-VEFSPDGSKLLIVLDAVMGHIGS 121
+++ ++ G D ++W + TG + + + + ++ V+ + G +++ G+
Sbjct: 90 DSSHLVSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVNRRGPQMI----CSASDDGT 145
Query: 122 IVVYSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYG 181
++V+ + E + K Y+ T + +++ +I G D QI +
Sbjct: 146 VMVHDMRSKEAAKKFICK----YQQTAV---------TFNDAADNVICGGIDNQIKVWDM 192
Query: 182 ENGEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTYKADCPLNSA 241
+ H +I + S + + +++S D SL+ D + + A
Sbjct: 193 LRNDVRYVLSGHRDTITSLSVSHNGNFLLSNSMD--CSLMSWDIRPFVPAQRLVARYQGA 250
Query: 242 SITPLKEFVILGGGQDAKDVTTTSAREGKFEARIYHKVFQDEIGRVKGHFGPLNYVAVSP 301
S K +L G +D T+ +F +++ + + ++ GH G +N A+ P
Sbjct: 251 SHNFEKN--LLKCGWSPRDNYITAGSADRF-VYVWNAKSRACVYKLPGHLGSVNCTALHP 307
Query: 302 TGTSYASGGEDGYIRLHHFD 321
T S G D I L D
Sbjct: 308 TQQILLSAGSDKTIFLGELD 327
>At5g08390 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 823
Score = 56.6 bits (135), Expect = 5e-08
Identities = 32/104 (30%), Positives = 49/104 (46%), Gaps = 1/104 (0%)
Query: 7 KGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTTY 66
KGH R + ++F DG + + +D+V +W G+ L H G I S+D
Sbjct: 233 KGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFL 292
Query: 67 ALTGGADFCFKIWKVATGVAVHSVSTRSPVLR-VEFSPDGSKLL 109
TG AD K W + T + S T + +R + F+PDG +L
Sbjct: 293 LATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVL 336
>7301145 [R] KOG0644 Uncharacterized conserved protein contains WD40 repeat
and BROMO domains
Length = 1225
Score = 56.6 bits (135), Expect = 5e-08
Identities = 52/217 (23%), Positives = 87/217 (39%), Gaps = 6/217 (2%)
Query: 8 GHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTTYA 67
GH + V F+R G + + D + IW A +G L TL S I I ++ T
Sbjct: 181 GHLSSVYCVLFDRTGRYIITGADDLLIKIWSAADGRLLATLRGASSEITDIAINLDNTML 240
Query: 68 LTGGADFCFKIWKVAT--GVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGHIGSIVVY 125
G D ++W + T +AV S T + V F P L L GSI +
Sbjct: 241 AAGSLDHILRVWDMQTTSPIAVLSAHT-GMITSVNFCPSPRSDLKYL-VTTSTDGSIAFW 298
Query: 126 SLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAY-YGENG 184
+I + Y ++ ++S G ++ AG D + Y GE+G
Sbjct: 299 QYSTPRGQKITFAPKPTQYHEKLRPGQAQMMCTTFSPGGIFLAAGSADHHVRVYMMGEDG 358
Query: 185 -EFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASL 220
+ + + + ++ +Q+S FI+ S+D A +
Sbjct: 359 PKRILETEAYTDAVDSVQWSHRGLRFISGSKDGTAHI 395
>YPR178w [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 465
Score = 56.2 bits (134), Expect = 7e-08
Identities = 47/199 (23%), Positives = 86/199 (42%), Gaps = 24/199 (12%)
Query: 6 LKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTT 65
L GHER ++ VK++ G + + S D +W A + L + H ++S+ +
Sbjct: 261 LVGHERRISDVKYHPSGKFIGSASHDMTWRLWDASTHQELLLQEGHDKGVFSLSFQCDGS 320
Query: 66 YALTGGADFCFKIWKVATGVAVHSVSTRS-PVLRVEFSPDGSKLLIVLDAVMGHIGSIVV 124
+GG D +W + +G V +++ S P+ V +SP+G ++ A G G I V
Sbjct: 321 LVCSGGMDSLSMLWDIRSGSKVMTLAGHSKPIYTVAWSPNGYQV-----ATGGGDGIINV 375
Query: 125 YSLIRNENGEIVNV-------------KEEPDYEITTIEQATKVFVAS---WSYNGKYII 168
+ + + + G++ + KE+ ++ + + V S W G +
Sbjct: 376 WDIRKRDEGQLNQILAHRNIVTQVRFSKEDGGKKLVSCGYDNLINVYSSDTWLKMGS--L 433
Query: 169 AGHEDGQISAYYGENGEFV 187
AGH D IS N F+
Sbjct: 434 AGHTDKIISLDISNNSHFL 452
Score = 51.6 bits (122), Expect = 2e-06
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 8/127 (6%)
Query: 4 IVLKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDES 63
++ +GH++ + + F DG LV + DS++ +W +G ++ TL HS I+++ +
Sbjct: 301 LLQEGHDKGVFSLSFQCDGSLVCSGGMDSLSMLWDIRSGSKVMTLAGHSKPIYTVAWSPN 360
Query: 64 TTYALTGGADFCFKIWKVA---TGVAVHSVSTRSPVLRVEFS-PDGSKLLIVLDAVMGHI 119
TGG D +W + G ++ R+ V +V FS DG K L+ G+
Sbjct: 361 GYQVATGGGDGIINVWDIRKRDEGQLNQILAHRNIVTQVRFSKEDGGKKLV----SCGYD 416
Query: 120 GSIVVYS 126
I VYS
Sbjct: 417 NLINVYS 423
>HsM4827028 [B] KOG0639 Transducin-like enhancer of split protein (contains
WD40 repeats)
Length = 770
Score = 56.2 bits (134), Expect = 7e-08
Identities = 42/203 (20%), Positives = 80/203 (38%), Gaps = 19/203 (9%)
Query: 21 DGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTTYALTGGADFCFKIWK 80
D + F+C D ++W N + H+ ID+ T TGG D + W
Sbjct: 585 DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWD 644
Query: 81 VATGVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGHIGSIVVYSLIRNENGEIVNVKE 140
+ G + S + + + P G L + ++ + N E+++V +
Sbjct: 645 LREGRQLQQHDFTSQIFSLGYCPTGEWLAVGME----------------SSNVEVLHVNK 688
Query: 141 EPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGENGEFVQAKKIHEKSIKDI 200
Y++ E V ++Y GK+ ++ +D ++A+ G + K S+
Sbjct: 689 PDKYQLHLHESC--VLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSC 745
Query: 201 QFSPDRTYFITSSRDSVASLVDV 223
S D Y +T S D A++ +V
Sbjct: 746 DISVDDKYIVTGSGDKKATVYEV 768
>Hs21541824 [B] KOG0639 Transducin-like enhancer of split protein (contains
WD40 repeats)
Length = 770
Score = 56.2 bits (134), Expect = 7e-08
Identities = 42/203 (20%), Positives = 80/203 (38%), Gaps = 19/203 (9%)
Query: 21 DGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTTYALTGGADFCFKIWK 80
D + F+C D ++W N + H+ ID+ T TGG D + W
Sbjct: 585 DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWD 644
Query: 81 VATGVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGHIGSIVVYSLIRNENGEIVNVKE 140
+ G + S + + + P G L + ++ + N E+++V +
Sbjct: 645 LREGRQLQQHDFTSQIFSLGYCPTGEWLAVGME----------------SSNVEVLHVNK 688
Query: 141 EPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGENGEFVQAKKIHEKSIKDI 200
Y++ E V ++Y GK+ ++ +D ++A+ G + K S+
Sbjct: 689 PDKYQLHLHESC--VLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSC 745
Query: 201 QFSPDRTYFITSSRDSVASLVDV 223
S D Y +T S D A++ +V
Sbjct: 746 DISVDDKYIVTGSGDKKATVYEV 768
>Hs21071067 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 800
Score = 56.2 bits (134), Expect = 7e-08
Identities = 57/262 (21%), Positives = 102/262 (38%), Gaps = 42/262 (16%)
Query: 57 SIDVDESTTYALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVM 116
++DV + ++ G AD ++W V T + SV S + ++ D VL+ +M
Sbjct: 475 AVDVTDDSSLIAGGFADSTVRVWSV-TPKKLRSVKQASDLSLIDKESDD-----VLERIM 528
Query: 117 GHIGSIVVYSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQI 176
K + +I + V+ AS+S + Y+++ EDG +
Sbjct: 529 DE--------------------KTASELKIL-YGHSGPVYGASFSPDRNYLLSSSEDGTV 567
Query: 177 SAYYGENGEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTYKAD- 235
+ + + K H + D QFSP YF++ D VA L D ++ L+ +
Sbjct: 568 RLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHL 627
Query: 236 CPLNSASITPLKEFVILGGGQDAKDVTTTSAREGKFEARIYHKVFQDEIGRVKGHFGPLN 295
+N P +V G R++ + + + GH GP++
Sbjct: 628 ADVNCTRFHPNSNYVATGSADRT--------------VRLWDVLNGNCVRIFTGHKGPIH 673
Query: 296 YVAVSPTGTSYASGGEDGYIRL 317
+ SP G A+G DG + L
Sbjct: 674 SLTFSPNGRFLATGATDGRVLL 695
>Hs14150171 [S] KOG1407 WD40 repeat protein
Length = 351
Score = 56.2 bits (134), Expect = 7e-08
Identities = 53/241 (21%), Positives = 105/241 (42%), Gaps = 24/241 (9%)
Query: 9 HERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDV----DEST 64
H + V ++ DG + + S D AS+ + + +RL +++ G S+D +
Sbjct: 54 HSAKVHSVAWSCDGRRLASGSFDKTASV-FLLEKDRLVKENNYRGHGDSVDQLCWHPSNP 112
Query: 65 TYALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGHIGSIVV 124
+T D +IW V T + +V+T+ + + +SPDG + + G+ +V
Sbjct: 113 DLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAV------GNKDDVVT 166
Query: 125 YSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGENG 184
+ + + +E+ +E+ I SW+ + + +G I+
Sbjct: 167 FIDAKTHRSK---AEEQFKFEVNEI---------SWNNDNNMFFLTNGNGCINILSYPEL 214
Query: 185 EFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTY-KADCPLNSASI 243
+ VQ+ H + I+F P YF T S D++ SL DVD ++ + + D P+ + S
Sbjct: 215 KPVQSINAHPSNCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSF 274
Query: 244 T 244
+
Sbjct: 275 S 275
>7300980 [R] KOG4155 FOG: WD40 repeat
Length = 743
Score = 56.2 bits (134), Expect = 7e-08
Identities = 48/220 (21%), Positives = 95/220 (42%), Gaps = 20/220 (9%)
Query: 6 LKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTT 65
L+GH + +T V+F+ L+++ SKD+ W A N H+ IW +D
Sbjct: 493 LRGHTKGVTDVRFSAHYPLMYSVSKDATMRCWRAHNLHCAAIYRSHNYPIWCLDESPVGQ 552
Query: 66 YALTGGADFCFKIWKVAT--GVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGHIGSIV 123
Y +TG D ++W + + +++ T+ V V F P+G+ + A S+
Sbjct: 553 YVVTGSKDLSARLWSLEKEHALIIYAGHTQD-VECVAFHPNGNYI-----ATGSADHSVR 606
Query: 124 VYSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGEN 183
++ +G+++ V + +T + ++S +GK + A E+ ++ +
Sbjct: 607 LWCA---TSGKLMRVFADCRQAVTQL---------AFSPDGKMLAAAGEETKVRIFDLAA 654
Query: 184 GEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDV 223
G + K H SI + +S + T+ D L D+
Sbjct: 655 GAQLAELKDHSASISSLSWSTHNRHLATACSDGTLRLWDI 694
>SPAC26H5.03 [BL] KOG1009 Chromatin assembly complex 1 subunit B/CAC2 (contains
WD40 repeats)
Length = 512
Score = 55.8 bits (133), Expect = 9e-08
Identities = 43/190 (22%), Positives = 85/190 (44%), Gaps = 21/190 (11%)
Query: 49 DDHSGTIWSIDVDESTTYAL-TGGADFCFKIWKVATGVAVHSVSTRSPVLR-------VE 100
DDH+ I+S+D +++ T G D +IW++ T + V S + R V
Sbjct: 16 DDHT-PIYSVDFQKNSLNKFATCGGDSKIRIWQLITSESSTKVEYLSTLSRHTQAVNVVR 74
Query: 101 FSPDGSKLLIVLDAVMGHIGSIVVY-------SLIRNENGEIVNVKEEPDYEITTIEQAT 153
F+P+G+ L A G G+I+++ + + ++ E+ KE +I +
Sbjct: 75 FNPEGNIL-----ATAGDEGTIMLWVPTNTPITTLADDAEELALAKEYWKVKIVCRSMGS 129
Query: 154 KVFVASWSYNGKYIIAGHEDGQISAYYGENGEFVQAKKIHEKSIKDIQFSPDRTYFITSS 213
+++ WS + ++IAG D + Y G+ + K H ++ + + P Y ++ S
Sbjct: 130 EIYDLCWSVDSNFLIAGAMDNSLRLYDAHTGQLLTQKFDHSHYVQGVCWDPLNQYIVSES 189
Query: 214 RDSVASLVDV 223
D L ++
Sbjct: 190 SDRSICLYEI 199
>Hs19913371 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 514
Score = 55.8 bits (133), Expect = 9e-08
Identities = 48/229 (20%), Positives = 93/229 (39%), Gaps = 16/229 (6%)
Query: 9 HERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTTYAL 68
H+ P+ +K+N+ G+ + + D IW A GE HS +D + T+A
Sbjct: 265 HKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFA- 323
Query: 69 TGGADFCFKIWKVATGVAVHSVSTR-SPVLRVEFSPDGSKLLIVLDAVMGHIGSIVVYSL 127
+ D C + K+ + + + V +++ P G+ L D + I S+ +
Sbjct: 324 SCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNC 383
Query: 128 IRN---ENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGENG 184
+ + N EI +K P T A + +AS S+ D + + + G
Sbjct: 384 VHDLQAHNKEIYTIKWSPTGPGTNNPNA-NLMLASASF----------DSTVRLWDVDRG 432
Query: 185 EFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTYK 233
+ H++ + + FSPD Y + S D + + T ++ +Y+
Sbjct: 433 ICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYR 481
Score = 49.3 bits (116), Expect = 8e-06
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 11/118 (9%)
Query: 2 RPI-VLKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSI-- 58
RPI +GH + +K++ G+L+ +CS D IW + L H+ I++I
Sbjct: 340 RPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKW 399
Query: 59 -------DVDESTTYALTGGADFCFKIWKVATGVAVHSVST-RSPVLRVEFSPDGSKL 108
+ + + D ++W V G+ +H+++ + PV V FSPDG L
Sbjct: 400 SPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYL 457
>CE27762 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 585
Score = 55.8 bits (133), Expect = 9e-08
Identities = 45/216 (20%), Positives = 86/216 (38%), Gaps = 21/216 (9%)
Query: 1 MRPIVLKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDV 60
M VL+GHE + D D++ S D+ +W GE + TL H+G +W+ +
Sbjct: 244 MGSAVLRGHEDHVITCMQIHD-DVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQI 302
Query: 61 DESTTYALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGHIG 120
+ Y ++G D K+W G +H++ + +R M G
Sbjct: 303 SQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVR----------------CMAMAG 346
Query: 121 SIVVYSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYY 180
SI+V R+ + +V E + T+ V ++G +++G D + +
Sbjct: 347 SILVTG-SRDTTLRVWDV--ESGRHLATL-HGHHAAVRCVQFDGTTVVSGGYDFTVKIWN 402
Query: 181 GENGEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDS 216
G ++ H + + F +R+ + S D+
Sbjct: 403 AHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDT 438
>CE25007 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 587
Score = 55.8 bits (133), Expect = 9e-08
Identities = 45/216 (20%), Positives = 86/216 (38%), Gaps = 21/216 (9%)
Query: 1 MRPIVLKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDV 60
M VL+GHE + D D++ S D+ +W GE + TL H+G +W+ +
Sbjct: 246 MGSAVLRGHEDHVITCMQIHD-DVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQI 304
Query: 61 DESTTYALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGHIG 120
+ Y ++G D K+W G +H++ + +R M G
Sbjct: 305 SQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVR----------------CMAMAG 348
Query: 121 SIVVYSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYY 180
SI+V R+ + +V E + T+ V ++G +++G D + +
Sbjct: 349 SILVTG-SRDTTLRVWDV--ESGRHLATL-HGHHAAVRCVQFDGTTVVSGGYDFTVKIWN 404
Query: 181 GENGEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDS 216
G ++ H + + F +R+ + S D+
Sbjct: 405 AHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDT 440
>SPBC713.05 [S] KOG0316 Conserved WD40 repeat-containing protein
Length = 297
Score = 55.5 bits (132), Expect = 1e-07
Identities = 57/254 (22%), Positives = 102/254 (39%), Gaps = 24/254 (9%)
Query: 10 ERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSID-VDESTTYAL 68
+ P+ VK+NR G V A + V +W +G + H I +D V +ST +A
Sbjct: 14 KEPINVVKYNRTGKYVLAAGNERVVRLWNVKSGACIHEYAGHGHEILDLDLVYDSTKFAS 73
Query: 69 TGGADFCFKIWKVATGVAVHSVSTR-SPVLRVEFSPDGSKLLIVLDAVMGHIGSIVVYSL 127
GG F ++W V TG + + + + ++ D S L G S V
Sbjct: 74 CGGDKF-IQVWDVNTGKVDRRLGGHLAQINTIRYNEDSSIL------ASGSFDSKVRLWD 126
Query: 128 IRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGENGEFV 187
R+ + + V + +++I+ A + I+ G DG + Y G
Sbjct: 127 CRSNSFSPIQVLADAKDSVSSIDIAEHL-----------IVTGSTDGTLRTYDIRKGTL- 174
Query: 188 QAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTY--KADCPLNSASITP 245
+ I ++ S ++ + SS +S L+D +T ++LK+Y + S
Sbjct: 175 -SSDYFSHPITSVKTSKSASFSLISSLNSSIHLLDQETGKILKSYIGLKNMEYRVRSSFN 233
Query: 246 LKEFVILGGGQDAK 259
E ++ G +D K
Sbjct: 234 QSETIVFSGSEDGK 247
>SPBC15D4.14 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 642
Score = 55.5 bits (132), Expect = 1e-07
Identities = 55/210 (26%), Positives = 87/210 (41%), Gaps = 19/210 (9%)
Query: 113 DAVMGHIG----SIVVYSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYII 168
DA M +G SI +YS N +V + EP + + I VF S S ++I+
Sbjct: 360 DASMFALGCADSSIHLYSSTNNGPQPLVGSQNEPLQKSSLIGHTRPVFGVSISPQKEFIL 419
Query: 169 AGHEDGQISAYYGENGEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEV 228
+ EDG + + + H I D+QFSP YF T+S D A L DV+
Sbjct: 420 SCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFGYYFATASHDQTARLWDVEHAAP 479
Query: 229 LKTYKA-DCPLNSASITPLKEFVILGGGQDAKDVTTTSAREGKFEARIYHKVFQDEIGRV 287
L+ + ++ S P ++ G + D TT R++ +
Sbjct: 480 LRVFVGHQNDVDCVSFHPNAAYLATG----SSDHTT----------RMWDVRTGGTVRVF 525
Query: 288 KGHFGPLNYVAVSPTGTSYASGGEDGYIRL 317
H P++ + +S G S AS E G I++
Sbjct: 526 NAHHSPVSALCMSADGLSLASADESGIIKV 555
Score = 53.9 bits (128), Expect = 3e-07
Identities = 42/171 (24%), Positives = 71/171 (40%), Gaps = 18/171 (10%)
Query: 8 GHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTTYA 67
GH P+ V+F+ G S D A +W + L H + + + Y
Sbjct: 443 GHNAPIWDVQFSPFGYYFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYL 502
Query: 68 LTGGADFCFKIWKVATGVAVHSVST-RSPVLRVEFSPDGSKLLIVLDAVMGHIGSIVVYS 126
TG +D ++W V TG V + SPV + S DG L A G I V+
Sbjct: 503 ATGSSDHTTRMWDVRTGGTVRVFNAHHSPVSALCMSADGLSL-----ASADESGIIKVWD 557
Query: 127 LIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQIS 177
L R+ N ++ ++ ++ V+ S+SY+ K +++G D ++
Sbjct: 558 L-RSSN-----------QHVSFVKHSSIVYSLSFSYDNKILVSGGADTDVN 596
>Hs11321585 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 55.1 bits (131), Expect = 2e-07
Identities = 68/326 (20%), Positives = 124/326 (37%), Gaps = 52/326 (15%)
Query: 6 LKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTT 65
L+GH + + + D L+ + S+D IW + ++ + S + + S
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 66 YALTGGAD-FCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGHIGSIVV 124
Y GG D C +++++ TR +RV + GH G +
Sbjct: 111 YVACGGLDNIC----------SIYNLKTREGNVRVSRE------------LAGHTGYLSC 148
Query: 125 YSLIRNENGEIVNVKEEPD---YEITTIEQATK-------VFVASWSYNGKYIIAGHEDG 174
+ ++ +IV + ++I T +Q T V S + + + ++G D
Sbjct: 149 CRFL--DDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDA 206
Query: 175 QISAYYGENGEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTYKA 234
+ G Q HE I I F P+ F T S D+ L D+ + L TY
Sbjct: 207 SAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSH 266
Query: 235 D---CPLNSASITPLKEFVILGGGQDAKDVTTTSAREGKFEARIYHKVFQDEIGRVKGHF 291
D C + S S + K +L G D F ++ + D G + GH
Sbjct: 267 DNIICGITSVSFS--KSGRLLLAGYD------------DFNCNVWDALKADRAGVLAGHD 312
Query: 292 GPLNYVAVSPTGTSYASGGEDGYIRL 317
++ + V+ G + A+G D ++++
Sbjct: 313 NRVSCLGVTDDGMAVATGSWDSFLKI 338
>At5g25150 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 700
Score = 55.1 bits (131), Expect = 2e-07
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 4 IVLKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDES 63
+ KGH P+ +F+ G +CS D A IW + +R+ L +G + +D +
Sbjct: 454 VCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIW---SMDRIQPLRIMAGHLSDVDWHPN 510
Query: 64 TTYALTGGADFCFKIWKVATGVAVH-SVSTRSPVLRVEFSPDG 105
Y TG +D ++W V TG V + RS VL + SPDG
Sbjct: 511 CNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDG 553
>At1g11160 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 974
Score = 54.7 bits (130), Expect = 2e-07
Identities = 33/108 (30%), Positives = 49/108 (44%), Gaps = 1/108 (0%)
Query: 7 KGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTTY 66
KGH R ++ ++F+ DG V + D+V +W G+ L H G I S+D
Sbjct: 88 KGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFL 147
Query: 67 ALTGGADFCFKIWKVATGVAVHSVSTRSPVLR-VEFSPDGSKLLIVLD 113
TG AD K W + T + + + +R + F PDG L LD
Sbjct: 148 LATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCGLD 195
>7296245 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 347
Score = 54.7 bits (130), Expect = 2e-07
Identities = 54/257 (21%), Positives = 87/257 (33%), Gaps = 38/257 (14%)
Query: 4 IVLKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDES 63
+ + GH + + F DG +F CS D + W G+R H + S+
Sbjct: 92 MAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRR 151
Query: 64 TTYALTGGA-DFCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLL------------- 109
L G+ D KIW A H++ + V V F G +++
Sbjct: 152 GQQLLCSGSDDRTIKIWDARKKHAAHTLESPFQVTAVCFGDTGEQVISGGIDNEVKIWDI 211
Query: 110 ---IVLDAVMGHIGSIVVYSL-------IRNENGEIVNVKEEPDYEITTIEQATKVFV-- 157
VL + GH +I SL + N + V + Y E+ KVF
Sbjct: 212 RKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPY--APGERCVKVFQGH 269
Query: 158 ----------ASWSYNGKYIIAGHEDGQISAYYGENGEFVQAKKIHEKSIKDIQFSPDRT 207
+WS I +G D + + + H S+ + FSP
Sbjct: 270 QHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEP 329
Query: 208 YFITSSRDSVASLVDVD 224
++ S D L ++D
Sbjct: 330 LILSGSSDKTLYLGEID 346
>YLR129w [A] KOG0306 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 943
Score = 54.3 bits (129), Expect = 3e-07
Identities = 49/217 (22%), Positives = 91/217 (41%), Gaps = 5/217 (2%)
Query: 17 KFNRDGDLVFACSKDSVASIWYAINGERLGTLDD-HSGTIWSIDVDESTTYALTGGADFC 75
KF G LV +++ ++ + L T++D H IWS+D+ +TG AD
Sbjct: 437 KFLPGGLLVILGTRNGELQLFDLASSSLLDTIEDAHDAAIWSLDLTSDGKRLVTGSADKT 496
Query: 76 FKIW--KVATGVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGHIGSIVVYSLIRNENG 133
K W KV + + + PVL++ +L + + SL+ +N
Sbjct: 497 VKFWDFKVENSLVPGTKNKFLPVLKLHHDTTLELTDDILCVRVSPDDRYLAISLL--DNT 554
Query: 134 EIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGENGEFVQAKKIH 193
V + + ++ V S++ K II D I + + G+ ++ H
Sbjct: 555 VKVFFLDSMKFYLSLYGHKLPVLSIDISFDSKMIITSSADKNIKIWGLDFGDCHKSLFAH 614
Query: 194 EKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLK 230
+ SI +++F P F + S+D+V D + FE ++
Sbjct: 615 QDSIMNVKFLPQSHNFFSCSKDAVVKYWDGEKFECIQ 651
>Hs4827030 [B] KOG0639 Transducin-like enhancer of split protein (contains
WD40 repeats)
Length = 772
Score = 54.3 bits (129), Expect = 3e-07
Identities = 41/203 (20%), Positives = 79/203 (38%), Gaps = 19/203 (9%)
Query: 21 DGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTTYALTGGADFCFKIWK 80
D + F+C D ++W N + H+ ID+ T TGG D + W
Sbjct: 587 DAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISHDGTKLWTGGLDNTVRSWD 646
Query: 81 VATGVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGHIGSIVVYSLIRNENGEIVNVKE 140
+ G + S + + + P G L + ++ + N E+++ +
Sbjct: 647 LREGRQLQQHDFTSQIFSLGYCPTGEWLAVGME----------------SSNVEVLHHTK 690
Query: 141 EPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGENGEFVQAKKIHEKSIKDI 200
Y++ E V ++Y GK+ ++ +D ++A+ G + K S+
Sbjct: 691 PHKYQLHLHESC--VLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASISQSK-ESSSVLSC 747
Query: 201 QFSPDRTYFITSSRDSVASLVDV 223
S D Y +T S D A++ +V
Sbjct: 748 DISADDKYIVTGSGDKKATVYEV 770
>At5g64730 [S] KOG0316 Conserved WD40 repeat-containing protein
Length = 343
Score = 54.3 bits (129), Expect = 3e-07
Identities = 61/262 (23%), Positives = 101/262 (38%), Gaps = 34/262 (12%)
Query: 5 VLKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDEST 64
+LKGHE + +FN DG+ C KD +W G + T H + + V
Sbjct: 13 ILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDN 72
Query: 65 TYALTGGADFCFKIWKVATGVAVHSVSTR-SPVLRVEFSPDGSKLLIVLDAVMGHIGSIV 123
+ G D W V+TG + V V+F+ S +V+ A G S+
Sbjct: 73 AKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSS---VVVSA--GFDRSLR 127
Query: 124 VYSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGEN 183
V+ R+ + E V + + T ++ V + II G DG + +
Sbjct: 128 VWD-CRSHSVEPVQIID------TFLDTVMSVVLTKTE-----IIGGSVDGTVRTFDMRI 175
Query: 184 GEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVL--------KTYKAD 235
G + + + I S D + DS L+D T E+L K++K D
Sbjct: 176 GR--EMSDNLGQPVNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTD 233
Query: 236 CPLNSASITPLKEFVILGGGQD 257
C L ++ + ++GG +D
Sbjct: 234 CCLTNS------DAHVIGGSED 249
>At5g52820 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 473
Score = 54.3 bits (129), Expect = 3e-07
Identities = 28/105 (26%), Positives = 50/105 (46%), Gaps = 1/105 (0%)
Query: 6 LKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTT 65
L GH++ + V F+ DG + + S D +W I G+ + H G ++ + +
Sbjct: 356 LTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSR 415
Query: 66 YALTGGADFCFKIWKVATGVAVHSVSTRS-PVLRVEFSPDGSKLL 109
L+G D KIW++ T + + V V++SPDG K++
Sbjct: 416 LLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVV 460
>At5g23430 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 922
Score = 54.3 bits (129), Expect = 3e-07
Identities = 31/104 (29%), Positives = 48/104 (45%), Gaps = 1/104 (0%)
Query: 7 KGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTTY 66
KGH R + ++F DG V + +D++ +W G+ L H G I S+D
Sbjct: 140 KGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFL 199
Query: 67 ALTGGADFCFKIWKVATGVAVHSVSTRSPVLR-VEFSPDGSKLL 109
TG AD K W + T + S + +R + F+PDG +L
Sbjct: 200 LATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVL 243
>7290895 [R] KOG0286 G-protein beta subunit
Length = 358
Score = 54.3 bits (129), Expect = 3e-07
Identities = 49/190 (25%), Positives = 84/190 (43%), Gaps = 18/190 (9%)
Query: 29 SKDSVASIWYAINGERLGTLDDHSGTIWSIDV--DESTTYALTGGADFCFKIWKVATGVA 86
S DS ++W +G+ L + HSG + +ID+ +E+ ++G D IW + +G
Sbjct: 177 SGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHV 236
Query: 87 VHSVST-RSPVLRVEFSPDGSKLLIVLDAVMGHIGSIVVYSLIRNENGEIVNVKEEPDYE 145
V S +S V V+F P G + D S +Y + R + V KE +
Sbjct: 237 VQSFEGHQSDVNSVKFHPCGDAIATGSDD-----SSCRLYDM-RADREVAVFAKESIIFG 290
Query: 146 ITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGENGEFVQAKKIHEKSIKDIQFSPD 205
+ +++ +S +G+ + AG+ D ++ + E V HE + +Q SPD
Sbjct: 291 VNSVD---------FSVSGRLLFAGYNDYTVNLWDTLKSERVCLLYGHENKVSCVQVSPD 341
Query: 206 RTYFITSSRD 215
T T S D
Sbjct: 342 GTALSTGSWD 351
>CE11944 [Z] KOG0318 WD40 repeat stress protein/actin interacting protein
Length = 600
Score = 53.9 bits (128), Expect = 3e-07
Identities = 42/214 (19%), Positives = 91/214 (41%), Gaps = 21/214 (9%)
Query: 9 HERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDD-----HSGTIWSIDVDES 63
H++ + ++N DG L + D ++ ++GE++G L+D H+G+I+++
Sbjct: 189 HKKFVQSTRYNNDGSLFASTGSDGTVVLYNGVDGEKVGVLEDAKGVAHTGSIFALAWSPD 248
Query: 64 TTYALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGHIGSIV 123
+ T AD KIW V+ ++ S + + +K ++ +V G +
Sbjct: 249 QSRIATASADKSVKIWDVSARKLERTIVMGSKIEDQQLGIVWTKSALITVSVSGFL---- 304
Query: 124 VYSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGEN 183
+ + ++G + +++ + IT + S S +GK++ + +G I+ + +
Sbjct: 305 --NFLNPDDGSVEKIRQGHNKAITAL---------SKSSDGKFLFSADAEGHITTWEISS 353
Query: 184 GEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSV 217
G K H I Q S + F D +
Sbjct: 354 GT-SSRKSPHTTMITGAQTSSNGDLFTVGWDDQL 386
>CE29339 [S] KOG0295 WD40 repeat-containing protein
Length = 404
Score = 53.5 bits (127), Expect = 4e-07
Identities = 54/260 (20%), Positives = 106/260 (40%), Gaps = 23/260 (8%)
Query: 6 LKGHERPLTQVKFNRDGDLVFACSKDSVASIW-YAINGERLGTLDDHSGTIWSIDVDEST 64
LKGH + + + G + +CS D +W + + L +L H T+ S+ +
Sbjct: 144 LKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTG 203
Query: 65 TYALTGGADFCFKIWKVATGVAVHSVSTRSPVLR-VEFSPDGSKLLIVLDAVMGHIGSIV 123
+ L+ D K W ++TG V++ + +R + S DG+ L A ++
Sbjct: 204 DFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGT-----LFASASLDQTVT 258
Query: 124 VYS--------LIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYII-AGHEDG 174
V+S ++R+ + V+ PD T + N +I+ +G D
Sbjct: 259 VWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQP------EGNSTHILFSGSRDR 312
Query: 175 QISAYYGENGEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTYKA 234
I A+ G+ + HE ++ + F P Y I+ + D + ++ +K +A
Sbjct: 313 SIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQRCMKAIEA 372
Query: 235 -DCPLNSASITPLKEFVILG 253
+ +++ + FVI G
Sbjct: 373 HEHFVSTVAFHQTSPFVITG 392
Score = 52.8 bits (125), Expect = 8e-07
Identities = 47/211 (22%), Positives = 86/211 (40%), Gaps = 3/211 (1%)
Query: 6 LKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTT 65
LKGHE ++ V F GD V + S+D W G + T H+ + I + T
Sbjct: 187 LKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGT 246
Query: 66 YALTGGADFCFKIWKVATGVAVHSVSTRSPVLR-VEFSPDGSKLLIVLDAVMGHIGSIVV 124
+ D +W AT A + + VE++PD + + G+ + ++
Sbjct: 247 LFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGN-STHIL 305
Query: 125 YSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGENG 184
+S R+ + + N+ D T + V ++ GKY+I+ +D + +
Sbjct: 306 FSGSRDRSIKAWNI-NTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQ 364
Query: 185 EFVQAKKIHEKSIKDIQFSPDRTYFITSSRD 215
++A + HE + + F + IT S D
Sbjct: 365 RCMKAIEAHEHFVSTVAFHQTSPFVITGSVD 395
>7293188 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 296
Score = 53.5 bits (127), Expect = 4e-07
Identities = 52/216 (24%), Positives = 92/216 (42%), Gaps = 18/216 (8%)
Query: 6 LKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTT 65
L GH R + V+F + V++ + W + + TL+ H ++ ++D + S
Sbjct: 56 LTGHNRSIDCVRFAYKDNFVYSADDIGIIRRWDLNSQKIYSTLNGHMKSVRTLDFNPSGE 115
Query: 66 YALTGGADFCFKIWKVATGVAVHSV--STRSPVLRVEFSPDGSKLLIVLDAVMGHIGSIV 123
Y ++G D ++W V V S V V+FSPDG + A G GSI+
Sbjct: 116 YVVSGSNDTTVRLWDVQNENNCIKVCRGHMSHVNSVKFSPDGLWI-----ASAGLEGSIL 170
Query: 124 VYSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGEN 183
++ IR + + + P IT ++ F+ + AG DG +S Y E+
Sbjct: 171 IWD-IRKSKQIMEFIADPPVTAITCVQFHPFEFL---------LAAGRVDGTVSIYDLEH 220
Query: 184 GEFV-QAKKIHEKSIKDIQFSPDRTYFITSSRDSVA 218
+ V Q + ++I+ I FS + S ++
Sbjct: 221 QQLVSQTTHFYGQAIRCITFSDNGECLFVGSSSGIS 256
>Hs15150805 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 522
Score = 53.1 bits (126), Expect = 6e-07
Identities = 49/232 (21%), Positives = 93/232 (39%), Gaps = 22/232 (9%)
Query: 9 HERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTTYAL 68
H+ P+ +K+N+ G+ V + D IW A GE HS +D + T+A
Sbjct: 275 HKGPIFALKWNKKGNYVLSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTFA- 333
Query: 69 TGGADFCFKIWKVATGVAVHSVST----RSPVLRVEFSPDGSKLLIVLDAVMGHIGSIVV 124
+ D C + ++ H V T + V +++ P G L D + I S+
Sbjct: 334 SCSTDMCIHVCRLGCD---HPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQ 390
Query: 125 YSLIRN---ENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYG 181
+ + + + EI +K P T+ + + +AS S+ D + +
Sbjct: 391 DACVHDLQAHSKEIYTIKWSPTGPATS-NPNSSIMLASASF----------DSTVRLWDV 439
Query: 182 ENGEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTYK 233
E G H++ + + FSPD Y + S D + + + ++ +Y+
Sbjct: 440 EQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIWNTQSGSLVHSYQ 491
Score = 49.7 bits (117), Expect = 6e-06
Identities = 44/181 (24%), Positives = 71/181 (38%), Gaps = 30/181 (16%)
Query: 7 KGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSI-------- 58
+GH + +K++ G L+ +CS D IW + L HS I++I
Sbjct: 356 QGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPA 415
Query: 59 -DVDESTTYALTGGADFCFKIWKVATGVAVHS-VSTRSPVLRVEFSPDGSKLLIVLDAVM 116
S+ + D ++W V GV H+ + + PV V FSPDG L
Sbjct: 416 TSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLA------- 468
Query: 117 GHIGSIVVYSLIRN-ENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQ 175
GS Y I N ++G +V+ + + +F W+ G + A DG
Sbjct: 469 --SGSFDKYVHIWNTQSGSLVH----------SYQGTGGIFEVCWNARGDKVGASASDGS 516
Query: 176 I 176
+
Sbjct: 517 V 517
>At1g71840 [S] KOG0296 Angio-associated migratory cell protein (contains WD40
repeats)
Length = 390
Score = 53.1 bits (126), Expect = 6e-07
Identities = 48/224 (21%), Positives = 94/224 (41%), Gaps = 21/224 (9%)
Query: 5 VLKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDEST 64
+ GH +T F DG L+ S D+ +W H+ + +D++ ++
Sbjct: 183 MFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCHPY-----HTEGLTCLDINSNS 237
Query: 65 TYALTGGADFCFKIWKVATGVAVHSVSTRSPVLR-VEFSPDGSKLLIVLDAVMGHIGSIV 123
+ A++G D I + TG V S+++ + + V+FSP S I L A G ++
Sbjct: 238 SLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSP--SSATIPLAATGGMDKKLI 295
Query: 124 VYSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGEN 183
++ L ++ + EE +T W KY+ G +G +S +
Sbjct: 296 IWDL-QHSTPRFICEHEEGVTSLT------------WIGTSKYLATGCANGTVSIWDSLL 342
Query: 184 GEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFE 227
G V H+ +++ I S + + ++ S D+ A + + F+
Sbjct: 343 GNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARVFESSEFQ 386
>SPBC31F10.13c [DK] KOG0973 Histone transcription regulator HIRA WD repeat
superfamily
Length = 932
Score = 52.8 bits (125), Expect = 8e-07
Identities = 68/287 (23%), Positives = 110/287 (37%), Gaps = 45/287 (15%)
Query: 45 LGTLDD--HSGTIWSIDVDESTTYALTGGADFCFKIWKVAT--------------GVAVH 88
LG DD H +I+SI + + TGG D +IW +
Sbjct: 9 LGHFDDRGHRLSIFSIHIHPDGSRIATGGLDGTIRIWSTEAINRENENENENEDLPKQLC 68
Query: 89 SVSTRS-PVLRVEFSPDGSKL-------LIVL----DAVMGHIGSIVVYSLIRNENGEIV 136
+ST + V V FSP+G L ++++ +A+ G +GS EN
Sbjct: 69 CMSTHTGTVTSVRFSPNGQYLASGSDDRVVIIWHKEEAIPG-LGSTFGSGEKHTENWRSY 127
Query: 137 NVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGENGEFVQAKKIHEKS 196
D +I + WSY+ + +++ D I + G E ++ + H+
Sbjct: 128 RRLLGHDNDIQDL---------CWSYDSQLVVSVGLDSSIIVWNGTTFERLKRIEAHQSH 178
Query: 197 IKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTYKADCPLNSASITPLKEFVILGGGQ 256
+K I F P YF T S D + V F + KT P N++ ++ F
Sbjct: 179 VKGITFDPAGKYFATESDDRTIKVWRVSDFSIEKTITG--PFNNSPLSTY--FRRPSWSP 234
Query: 257 DAKDVTTTSAREGKFE--ARIYHKVFQDEIGRVKGHFGPLNYVAVSP 301
D K + +A G + I + EI + GH GP+ A +P
Sbjct: 235 DGKHIAAPNAMNGPVSCVSIIERGTWTSEINLI-GHEGPVEVTAFNP 280
Score = 49.7 bits (117), Expect = 6e-06
Identities = 50/218 (22%), Positives = 88/218 (39%), Gaps = 12/218 (5%)
Query: 6 LKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTT 65
L GH+ + + ++ D LV + DS +W ERL ++ H + I D +
Sbjct: 130 LLGHDNDIQDLCWSYDSQLVVSVGLDSSIIVWNGTTFERLKRIEAHQSHVKGITFDPAGK 189
Query: 66 YALTGGADFCFKIWKVATGVAVHSVS---TRSPV----LRVEFSPDGSKLLIVLDAVMGH 118
Y T D K+W+V+ +++ SP+ R +SPDG K + +A+ G
Sbjct: 190 YFATESDDRTIKVWRVSDFSIEKTITGPFNNSPLSTYFRRPSWSPDG-KHIAAPNAMNGP 248
Query: 119 IGSIVVYSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISA 178
+ + + EI + E E+T K+F + G +D +S
Sbjct: 249 VSCVSIIER-GTWTSEINLIGHEGPVEVTAFN--PKLFRDKNDKLVCILACGGQDRSLSI 305
Query: 179 YYGE-NGEFVQAKKIHEKSIKDIQFSPDRTYFITSSRD 215
+ + + + +KSI D+ +SPD S D
Sbjct: 306 WSSALPRPLLSCQNVFQKSIGDVCWSPDGLSLFLCSYD 343
>SPAC29E6.01 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 506
Score = 52.8 bits (125), Expect = 8e-07
Identities = 57/236 (24%), Positives = 101/236 (42%), Gaps = 34/236 (14%)
Query: 21 DGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTTYALTGGADFCFKIW- 79
D +++ + SKD S+W + L L HSG++ +D ++G +D IW
Sbjct: 230 DDEIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWD 289
Query: 80 -------KV-------ATGVAVHS----VSTRSPVLRVEFSPDGSKLLIVLDAVMGHIGS 121
KV GV V S+R RV S + + GH+ S
Sbjct: 290 WQNRRPLKVYFGHTDNVLGVVVSENYIISSSRDHTARVWRLDATSPAEACMHVLRGHLAS 349
Query: 122 I--VVYSLIRNENGEIVNVKEEPD---YEITT-----IEQATKVFVASWSYNGKYIIAGH 171
+ V YS ++ G IV + ++ITT I A + +A YNGK+I++G
Sbjct: 350 VNSVQYS---SKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIACAQYNGKFIVSGS 406
Query: 172 EDGQISAYYGENGEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFE 227
D I + +G+ ++ + HE I+ ++F+ ++ ++ D + + +T E
Sbjct: 407 SDLTIRIFEASSGKLLRMLQGHEDLIRTVRFNDEK--IVSGGYDGTVRIWNFNTGE 460
>Hs5729852 [R] KOG0286 G-protein beta subunit
Length = 353
Score = 52.8 bits (125), Expect = 8e-07
Identities = 48/213 (22%), Positives = 82/213 (37%), Gaps = 24/213 (11%)
Query: 9 HERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTT--Y 66
H L+ F + S D ++W +G+ L + H + +D+ S T
Sbjct: 152 HTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNT 211
Query: 67 ALTGGADFCFKIWKVATGVAVHSVSTR-SPVLRVEFSPDGSKLLIVLDAVMGHIGSIVVY 125
++GG D +W + +G V + T S + V + P G D + Y
Sbjct: 212 FVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYYPSGDAFASGSDDATCRL-----Y 266
Query: 126 SLIRNENGEIVNVKEEPDYEITTIEQATKVFVAS---WSYNGKYIIAGHEDGQISAYYGE 182
L D E+ + + +F AS +S +G+ + AG+ D I+ +
Sbjct: 267 DL-------------RADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVL 313
Query: 183 NGEFVQAKKIHEKSIKDIQFSPDRTYFITSSRD 215
G V HE + ++ SPD T F + S D
Sbjct: 314 KGSRVSILFGHENRVSTLRVSPDGTAFCSGSWD 346
>Hs20336270 [R] KOG0286 G-protein beta subunit
Length = 395
Score = 52.8 bits (125), Expect = 8e-07
Identities = 48/213 (22%), Positives = 82/213 (37%), Gaps = 24/213 (11%)
Query: 9 HERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTT--Y 66
H L+ F + S D ++W +G+ L + H + +D+ S T
Sbjct: 194 HTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNT 253
Query: 67 ALTGGADFCFKIWKVATGVAVHSVSTR-SPVLRVEFSPDGSKLLIVLDAVMGHIGSIVVY 125
++GG D +W + +G V + T S + V + P G D + Y
Sbjct: 254 FVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYYPSGDAFASGSDDATCRL-----Y 308
Query: 126 SLIRNENGEIVNVKEEPDYEITTIEQATKVFVAS---WSYNGKYIIAGHEDGQISAYYGE 182
L D E+ + + +F AS +S +G+ + AG+ D I+ +
Sbjct: 309 DL-------------RADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVL 355
Query: 183 NGEFVQAKKIHEKSIKDIQFSPDRTYFITSSRD 215
G V HE + ++ SPD T F + S D
Sbjct: 356 KGSRVSILFGHENRVSTLRVSPDGTAFCSGSWD 388
>SPCC5E4.03c [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 643
Score = 52.4 bits (124), Expect = 1e-06
Identities = 41/179 (22%), Positives = 73/179 (39%), Gaps = 15/179 (8%)
Query: 140 EEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGENGEFVQAKKIHEKSIKD 199
E+ D + + + V+ ++S + KY+++ ED + + + A K H + D
Sbjct: 367 EDSDGSVRLLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWD 426
Query: 200 IQFSPDRTYFITSSRDSVASLVDVDTFEVLKTYKAD-CPLNSASITPLKEFVILGGGQDA 258
+ F P YF T+S D A L D L+ + ++ + P +V+ G
Sbjct: 427 VAFGPFGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSD-- 484
Query: 259 KDVTTTSAREGKFEARIYHKVFQDEIGRVKGHFGPLNYVAVSPTGTSYASGGEDGYIRL 317
K G R+++ GH P+ VA++P G + AS +G I L
Sbjct: 485 KTCRLWDVHRG-HSVRVFN-----------GHTQPVTAVAIAPDGHTMASADSEGLIHL 531
Score = 50.8 bits (120), Expect = 3e-06
Identities = 22/77 (28%), Positives = 38/77 (48%)
Query: 5 VLKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDEST 64
V GH +P+T V DG + + + + +W G R+ T+ H G I+S+ +
Sbjct: 500 VFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRES 559
Query: 65 TYALTGGADFCFKIWKV 81
T ++GG+D + W V
Sbjct: 560 TVLVSGGSDCTVRAWDV 576
>SPAC630.14c [R] KOG0266 WD40 repeat-containing protein
Length = 586
Score = 52.4 bits (124), Expect = 1e-06
Identities = 55/231 (23%), Positives = 93/231 (39%), Gaps = 27/231 (11%)
Query: 87 VHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGHIGSIVVYSLIRNENGEIVNVKEEPDYEI 146
+H++ S + V FS DG L G + +V+++ E G+++ + +E E
Sbjct: 281 LHTLEHTSVICYVRFSADGKFL------ATGCNRAAMVFNV---ETGKLITLLQE---ES 328
Query: 147 TTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGENGEFVQAKKIHEKSIKDIQFSPDR 206
+ E V ++S +GKY+ G ED QI + + HE+ I + FS D
Sbjct: 329 SKREGDLYVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDG 388
Query: 207 TYFITSSRDSVASLVDVDTFEVLKTYKADCPLNSASITPLKEFVILGGGQDAKDVTTTSA 266
++ S D L DV+ E D + + +P +F+ G + T+S
Sbjct: 389 KTLVSGSGDRTVCLWDVEAGEQKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWTSSG 448
Query: 267 REGKFEARIYHKVFQDEIGRVKGHFGPLNYVAVSPTGTSYASGGEDGYIRL 317
+ ++ GH + VA SP G SG D I+L
Sbjct: 449 ---------------TLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKL 484
Score = 52.0 bits (123), Expect = 1e-06
Identities = 50/212 (23%), Positives = 85/212 (39%), Gaps = 8/212 (3%)
Query: 5 VLKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDEST 64
+L GHE+ + + F++DG + + S D +W GE+ L G + ++
Sbjct: 371 LLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLILHTDDG-VTTVMFSPDG 429
Query: 65 TYALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGHI-GSIV 123
+ G D +IW + + V V FSPDG L V G + +I
Sbjct: 430 QFIAAGSLDKVIRIWTSSGTLVEQLHGHEESVYSVAFSPDGKYL------VSGSLDNTIK 483
Query: 124 VYSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGEN 183
++ L N KE + T + + S +GK+II+G +D I + ++
Sbjct: 484 LWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDS 543
Query: 184 GEFVQAKKIHEKSIKDIQFSPDRTYFITSSRD 215
+ H S+ + SP+ F T S D
Sbjct: 544 PHSQLTLQGHNNSVISVAVSPNGHCFATGSGD 575
Score = 51.6 bits (122), Expect = 2e-06
Identities = 51/212 (24%), Positives = 82/212 (38%), Gaps = 30/212 (14%)
Query: 16 VKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTTYALTGGADFC 75
V F+ DG + +D IW L H I+S+D + ++G D
Sbjct: 340 VAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRT 399
Query: 76 FKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGHIGSIVVYSLIRNENGEI 135
+W V G + T V V FSPDG + GS+ I +G +
Sbjct: 400 VCLWDVEAGEQKLILHTDDGVTTVMFSPDGQFIA---------AGSLDKVIRIWTSSGTL 450
Query: 136 VNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAY------------YGEN 183
V ++ E++ V+ ++S +GKY+++G D I + Y E
Sbjct: 451 VE-------QLHGHEES--VYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEG 501
Query: 184 GEFVQAKKIHEKSIKDIQFSPDRTYFITSSRD 215
G Q H+ I + SPD + I+ S+D
Sbjct: 502 GICKQTFTGHKDFILSVTVSPDGKWIISGSKD 533
>SPBC3D6.12 [A] KOG0306 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 922
Score = 52.0 bits (123), Expect = 1e-06
Identities = 44/219 (20%), Positives = 84/219 (38%), Gaps = 15/219 (6%)
Query: 18 FNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTTYALTGGADFCFK 77
F + + + K ++ + + + H G IW + V TY T AD K
Sbjct: 443 FINNDKCIVSAYKSGELEVYDIASSSLIERIQAHDGAIWDLAVGHDGTYFATASADHTVK 502
Query: 78 IWKVATGVAVHSVSTRSPVL-------RVEFSPDGSKLLIVLDAVMGHIGSIVVYSLIRN 130
+W + + +TR +++F+ D VL + G V SL+
Sbjct: 503 LWSLKSSFDFVPGTTRKVTTLKLEQTRQIDFTDD------VLAVKISPDGRFVAASLL-- 554
Query: 131 ENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGENGEFVQAK 190
+N V + + + V SY+ K ++ D + + + G+ ++
Sbjct: 555 DNTVKVYYLDSLKFFLNLYGHKLPVLSMDISYDSKLLVTCSADKNVKIWGLDFGDCHKSI 614
Query: 191 KIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVL 229
H+ SI ++ F PD F T S+D D +F+++
Sbjct: 615 FAHQDSIMEVTFQPDTYNFFTCSKDREVRYWDGKSFDLI 653
>7298279 [S] KOG0316 Conserved WD40 repeat-containing protein
Length = 277
Score = 52.0 bits (123), Expect = 1e-06
Identities = 55/219 (25%), Positives = 89/219 (40%), Gaps = 20/219 (9%)
Query: 16 VKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTTYALTGGADFC 75
V++N DG +C D +W +G L T H+ + ++Y ++ D
Sbjct: 23 VRYNVDGTYCLSCGSDKKIKLWNPASGLLLKTYGGHADEVTDAAGSCDSSYIVSASLDKS 82
Query: 76 FKIWKVATGVAVHSVSTRSPVLR-VEFSPDGSKLLIVLDAVMGHIGSIVVYSLIRNENGE 134
W V+TG V + + + +R V F+ D S A+ G + V+ IR +
Sbjct: 83 IIYWDVSTGAPVRRLRSHAGGVRCVCFNEDSS------IAISGGRDNAVMCWDIRTRRLD 136
Query: 135 IVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGENGEFVQAKKIHE 194
V V +E ITT+ + N I A DG + Y GE + KI E
Sbjct: 137 PVQVMKEARDCITTV-----------ATNENRIYAASLDGCVRTYDIRVGE-LTCDKIGE 184
Query: 195 KSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTYK 233
I + + D + +DSV L+D +T +L Y+
Sbjct: 185 -PITYLAQTRDEQCLVAGCQDSVVRLLDCETGGLLSEYR 222
>CE27149 [S] KOG0316 Conserved WD40 repeat-containing protein
Length = 305
Score = 51.6 bits (122), Expect = 2e-06
Identities = 45/219 (20%), Positives = 79/219 (35%), Gaps = 20/219 (9%)
Query: 16 VKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTTYALTGGADFC 75
V++N DG+ C D +W + L T + + GGAD
Sbjct: 22 VRYNVDGNYCVTCGSDKTVKLWNPLKSSLLKTYSGTGNEVLDAASSSDNSQIAAGGADRA 81
Query: 76 FKIWKVATGVAVHSVSTR-SPVLRVEFSPDGSKLLIVLDAVMGHIGSIVVYSLIRNENGE 134
++ V TG + T + V V F+ + S VV+S + +
Sbjct: 82 CTVFDVETGKQLRRWRTHGAQVNAVAFNEESS----------------VVFSGSMDCTMQ 125
Query: 135 IVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGENGEFVQAKKIHE 194
+ + + I ++T + S NG I+AG DG Y +G
Sbjct: 126 AFDCRSRSEKPIQIFNESTD-GILSIDVNGHEIVAGSADGNYRVYSIRDGN--MTVDYMG 182
Query: 195 KSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTYK 233
S+ + F+PD + + L+D + ++L +YK
Sbjct: 183 DSVNSVSFTPDSNCLLAGVMGGIVRLIDKSSGKLLASYK 221
>At1g48630 [T] KOG0279 G protein beta subunit-like protein
Length = 326
Score = 51.6 bits (122), Expect = 2e-06
Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 9/157 (5%)
Query: 161 SYNGKYIIAGHEDGQISAYYGENGEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASL 220
S +G++ ++G DG++ + GE + H K + + FS D +++SRD L
Sbjct: 72 SSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKL 131
Query: 221 VDVDTFEVLKTYKADCPLNSASITPLKEFVILGGGQDAKDVTTTSAREGKFEARIYHKVF 280
+ +C + KE+V V T + ++++
Sbjct: 132 WNT---------LGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQN 182
Query: 281 QDEIGRVKGHFGPLNYVAVSPTGTSYASGGEDGYIRL 317
+ GH G LN VAVSP G+ ASGG+DG I L
Sbjct: 183 CKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILL 219
Score = 50.4 bits (119), Expect = 4e-06
Identities = 42/177 (23%), Positives = 80/177 (44%), Gaps = 7/177 (3%)
Query: 8 GHERPLTQVKFNRDG--DLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTT 65
GH+ ++ V+F+ + + + S D +W N + TL HSG + ++ V +
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGS 206
Query: 66 YALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGHIGSIVVY 125
+GG D +W +A G ++S+ S + + FSP+ L + + I +
Sbjct: 207 LCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCFSPNRYWLCAATENSI-RIWDLESK 265
Query: 126 SLIRNENGEIVNVKEEPDYEITTIEQATKVFVA---SWSYNGKYIIAGHEDGQISAY 179
S++ + ++ E+ D T I TKV +WS +G + +G+ DG I +
Sbjct: 266 SVVEDLKVDLKAEAEKTDGS-TGIGNKTKVIYCTSLNWSADGNTLFSGYTDGVIRVW 321
>7296187 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 481
Score = 51.6 bits (122), Expect = 2e-06
Identities = 26/104 (25%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Query: 6 LKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTT 65
+ GH+ + VK++ D L+ + S D +W A +G+ + T H ++++ +
Sbjct: 364 MTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAWSADSR 423
Query: 66 YALTGGADFCFKIWKVAT-GVAVHSVSTRSPVLRVEFSPDGSKL 108
++G D K+W V T +A V V+++PDGS++
Sbjct: 424 LIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVDWAPDGSRV 467
>SPAC227.12 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 462
Score = 51.2 bits (121), Expect = 2e-06
Identities = 46/216 (21%), Positives = 89/216 (40%), Gaps = 18/216 (8%)
Query: 6 LKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTT 65
L+GH + +V F+ GD + + S D+ +W G L + HS I+SI +
Sbjct: 261 LEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGS 320
Query: 66 YALTGGADFCFKIWKVATGVAVHSVSTR-SPVLRVEFSPDGSKLLIVLDAVMGHIGSIVV 124
+GG D +IW + +G ++ + ++ + +SP+G +L A ++ +
Sbjct: 321 LVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQL-----ATSSADDTVKI 375
Query: 125 YSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGENG 184
+ L + + ++ IE F+A+ Y DG + + N
Sbjct: 376 WDLRKVSLAHTIPAHSSLVSDVRYIESGVNRFIATSGY----------DGCVKLWNPLNC 425
Query: 185 EFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASL 220
+++ HE+ + + DR FI+S D L
Sbjct: 426 SLIKSMVGHEEKVMSVDGYGDR--FISSGYDRTIKL 459
>Hs11055998 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 51.2 bits (121), Expect = 2e-06
Identities = 66/325 (20%), Positives = 119/325 (36%), Gaps = 50/325 (15%)
Query: 6 LKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTT 65
L+GH + + + D L+ + S+D IW + ++ + S + + S
Sbjct: 51 LRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGN 110
Query: 66 YALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGHIGSIVVY 125
Y GG D I+ + T VS P GH G +
Sbjct: 111 YVACGGLDNICSIYNLKTREGNVRVSRELP---------------------GHTGYLSCC 149
Query: 126 SLIRNENGEIVNVKEEPD---YEITTIEQAT-------KVFVASWSYNGKYIIAGHEDGQ 175
+ ++ +IV + ++I T +Q T V S S + + ++G D
Sbjct: 150 RFL--DDSQIVTSSGDTTCALWDIETAQQTTTFTGHSGDVMSLSLSPDMRTFVSGACDAS 207
Query: 176 ISAYYGENGEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTYKAD 235
+ +G Q+ H I + F P+ F T S D+ L D+ + L Y D
Sbjct: 208 SKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYAFATGSDDATCRLFDLRADQELLLYSHD 267
Query: 236 ---CPLNSASITPLKEFVILGGGQDAKDVTTTSAREGKFEARIYHKVFQDEIGRVKGHFG 292
C + S + + K +L G D F ++ + D G + GH
Sbjct: 268 NIICGITSVAFS--KSGRLLLAGYD------------DFNCNVWDTLKGDRAGVLAGHDN 313
Query: 293 PLNYVAVSPTGTSYASGGEDGYIRL 317
++ + V+ G + A+G D ++R+
Sbjct: 314 RVSCLGVTDDGMAVATGSWDSFLRI 338
>7300806 [S] KOG0282 mRNA splicing factor
Length = 576
Score = 51.2 bits (121), Expect = 2e-06
Identities = 60/268 (22%), Positives = 102/268 (37%), Gaps = 46/268 (17%)
Query: 8 GHERPLTQVK-FNRDGDLVFACSKDSVASIWYAINGER--LGTLDDHSGTIWSIDVDEST 64
GH + ++ ++ F + L+ + S D +W + GER + T H I I +
Sbjct: 283 GHNKGISSIRWFPKTAHLLLSGSMDCRVKLW-EVYGERRCIRTFSGHRQAIKDIAWNNRG 341
Query: 65 TYALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGS-----------KLLIVLD 113
T L+ D K+W TG V +TR V+F PD S K +I D
Sbjct: 342 TNFLSASYDRYIKLWDAETGDVVSRFTTRKMPFCVKFHPDNSKQHLFVAGTSDKKIICWD 401
Query: 114 AVMG--------HIGSIVVYSLIRNENGEIVNVKEEPDYEI--------------TTIEQ 151
G H+GS+ + + ++N V ++ I T+
Sbjct: 402 TRSGDIVQEYDRHLGSVSTITFV-DDNRRFVTTSDDKSMRIWEWDIPVDMKYIADPTMHS 460
Query: 152 ATKVFVASWSYNGKYIIAGHEDGQISAYYGENGEFVQAKKIHEKSIK-----DIQFSPDR 206
V +A NGK++ D +I + N + KK + + FSPD
Sbjct: 461 MPAVTLAP---NGKWMACQSLDNKIVIFSALNRFKMNRKKTFTGHMVSGYACQLDFSPDM 517
Query: 207 TYFITSSRDSVASLVDVDTFEVLKTYKA 234
+Y ++ D + D T ++ K ++A
Sbjct: 518 SYLVSGDGDGKCYIWDWKTTKMYKKWQA 545
>7295309 [R] KOG0266 WD40 repeat-containing protein
Length = 742
Score = 51.2 bits (121), Expect = 2e-06
Identities = 46/217 (21%), Positives = 86/217 (39%), Gaps = 18/217 (8%)
Query: 9 HERPLTQVKFNRDGDLVFACSKDSVASIWYA--INGERLGTLDDHSGTIWSIDVDESTTY 66
H + + + G L+ + +W + +G L DHSG I S+D++ T
Sbjct: 451 HNKGCSALAVASSGRLIVTGGIEGQVRVWKIDPYRQDLVGVLKDHSGPITSLDINYLDTE 510
Query: 67 ALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGHIGSIVVYS 126
++ D IW + V+ + + + P G +++ G G I+ +
Sbjct: 511 VISACTDGSCVIWDIKRMTRKQVVTANTQFMSASYFPTGVQVI-----TCGSDGRIIYWM 565
Query: 127 LIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGENGEF 186
+ NG ++ E+T ++++ V + + G Y I D Q+ + +G
Sbjct: 566 VY---NGALIR-------ELTASKKSS-VNCLAINETGDYFITVGSDLQVKLWDYNSGAV 614
Query: 187 VQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDV 223
V H S+ +SP T F+T S D + DV
Sbjct: 615 VGIGSEHASSVISCAYSPCMTMFVTGSTDGSLIIWDV 651
>Hs8922428 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 485
Score = 50.8 bits (120), Expect = 3e-06
Identities = 28/104 (26%), Positives = 50/104 (47%), Gaps = 1/104 (0%)
Query: 6 LKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTT 65
+ GH+ + QV F+ D +V + S D +W G+ L +L H ++ I +
Sbjct: 368 MTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSR 427
Query: 66 YALTGGADFCFKIWKV-ATGVAVHSVSTRSPVLRVEFSPDGSKL 108
++G +D K+W V A +A+ V V++SPDG ++
Sbjct: 428 LLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRV 471
>At5g16750 [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 876
Score = 50.8 bits (120), Expect = 3e-06
Identities = 21/77 (27%), Positives = 34/77 (43%)
Query: 7 KGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTTY 66
+GH + + F DG +C D + +W E + T D H +W++ V + T
Sbjct: 580 EGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEM 639
Query: 67 ALTGGADFCFKIWKVAT 83
TGG D +W +T
Sbjct: 640 IATGGGDAVINLWHDST 656
Score = 49.7 bits (117), Expect = 6e-06
Identities = 30/106 (28%), Positives = 49/106 (45%), Gaps = 1/106 (0%)
Query: 5 VLKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDEST 64
V+ H++ + V R+ LV S+D ASIW + + TL H I+S++
Sbjct: 494 VVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVD 553
Query: 65 TYALTGGADFCFKIWKVATGVAVHSVSTR-SPVLRVEFSPDGSKLL 109
+T D KIW ++ G + + S VLR F DG++ +
Sbjct: 554 QCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFV 599
>CE17845 [R] KOG0286 G-protein beta subunit
Length = 356
Score = 50.4 bits (119), Expect = 4e-06
Identities = 47/211 (22%), Positives = 87/211 (40%), Gaps = 20/211 (9%)
Query: 9 HERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDV---DESTT 65
H ++ F R +L+ S DS +IW +G+ + H+G +++IDV D T
Sbjct: 155 HTSYMSCCTFLRSDNLILTGSGDSTCAIWDVESGQLIQNFHGHTGDVFAIDVPKCDTGNT 214
Query: 66 YALTGGADFCFKIWKVATGVAVHSV-STRSPVLRVEFSPDGSKLLIVLDAVMGHIGSIVV 124
+ ++ GAD +W + +G V S + + V F P+G D +
Sbjct: 215 F-ISAGADKHSLVWDIRSGQCVQSFEGHEADINTVRFHPNGDAFATGSDDATCRLFD--- 270
Query: 125 YSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGENG 184
+R + V KE + + ++ +S +G+ + AG+ D ++ +
Sbjct: 271 ---LRADRQVCVYEKESILFPVNGVD---------FSLSGRILFAGYGDYRVGVWDSLKC 318
Query: 185 EFVQAKKIHEKSIKDIQFSPDRTYFITSSRD 215
HE I ++ SPD T ++S D
Sbjct: 319 ARHSVLYGHENRISCLRTSPDGTAVCSASWD 349
>At5g50230 [R] KOG0288 WD40 repeat protein TipD
Length = 515
Score = 50.4 bits (119), Expect = 4e-06
Identities = 54/296 (18%), Positives = 115/296 (38%), Gaps = 45/296 (15%)
Query: 51 HSGTIWSIDVDESTTYALTGGADFCFKIWKVATGVAVHSV-STRSPVLRVEFSPDGSKLL 109
H G SI + ++ TGG D K+W +G + S+ + +L + + D ++
Sbjct: 230 HEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVI 289
Query: 110 I----------------VLDAVMGHIGSIVVYSLIRNENGEIVNVKEEPDYEITTIEQA- 152
V + GH + + + + +V+ + ++ + +
Sbjct: 290 AATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGY 349
Query: 153 ---TKVFVASW-----SYNGKYIIAGHEDGQISAYYGENGEFVQAKKIHEKSIKDIQFSP 204
T +F ++ S +G + +GH DG + + + G+ + H ++ + S
Sbjct: 350 CTNTVLFTSNCNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSR 409
Query: 205 DRTYFITSSRDSVASLVDVDTFEVLKTYKAD-----CPLNSASITPLKEFVILGGGQDAK 259
+ +TS RD+V ++ D T E+ T +A + + I+P ++V G +
Sbjct: 410 NGNRILTSGRDNVHNVFDTRTLEICGTLRASGNRLASNWSRSCISPDDDYVAAGSADGSV 469
Query: 260 DVTTTSAREGKFEARIYHKVFQDEIGRVKGHFGPLNYVAVSPTGTSYASGGEDGYI 315
V + S +G + +K P+ + S G AS ++GY+
Sbjct: 470 HVWSLS--KGNI------------VSILKEQTSPILCCSWSGIGKPLASADKNGYV 511
>YJL112w [R] KOG4155 FOG: WD40 repeat
Length = 714
Score = 50.1 bits (118), Expect = 5e-06
Identities = 38/176 (21%), Positives = 78/176 (43%), Gaps = 22/176 (12%)
Query: 4 IVLKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDES 63
++ + +ERP + D L +KD V +W +G+ + TL H+ I S+ D +
Sbjct: 559 LLTQRNERPSIGALQSFDAALATG-TKDGVVRLWDLRSGKVIRTLKGHTDAITSLKFDSA 617
Query: 64 TTYALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGHIGSIV 123
+TG D +IW + TG+ + +PVL ++ + + +++ + S+
Sbjct: 618 CL--VTGSYDRTVRIWDLRTGLLNKFHAYSAPVLSLDLFQENAAVVVADEP------SVQ 669
Query: 124 VYSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAY 179
+Y E D + +EQ + V++ Y Y++ G E+G ++ +
Sbjct: 670 IYD-------------SEKDESWSCVEQGNETSVSTVKYKENYMVEGRENGDVNIW 712
>YCR084c [R] KOG0266 WD40 repeat-containing protein
Length = 713
Score = 50.1 bits (118), Expect = 5e-06
Identities = 49/232 (21%), Positives = 88/232 (37%), Gaps = 21/232 (9%)
Query: 4 IVLKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDES 63
++L+GHE+ + + + GD + + S D IW G+ TL G
Sbjct: 479 MILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGD 538
Query: 64 TTYALTGGADFCFKIWKVATGVAVHSVST--------RSPVLRVEFSPDGSKLLIVLDAV 115
Y G D ++W TG V + + + V V F+ DG + V
Sbjct: 539 GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSV------V 592
Query: 116 MGHIG-SIVVYSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDG 174
G + S+ +++L N E+T I V + + N +YI++G +D
Sbjct: 593 SGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDR 652
Query: 175 QISAYYGENGEFVQAKKIHEKSIKDI------QFSPDRTYFITSSRDSVASL 220
+ + ++G + + H S+ + P+ F T S D A +
Sbjct: 653 GVLFWDKKSGNPLLMLQGHRNSVISVAVANGSPLGPEYNVFATGSGDCKARI 704
>SPBC21B10.05c [R] KOG0315 G-protein beta subunit-like protein (contains WD40
repeats)
Length = 314
Score = 50.1 bits (118), Expect = 5e-06
Identities = 43/233 (18%), Positives = 97/233 (41%), Gaps = 16/233 (6%)
Query: 4 IVLKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDES 63
+ +GH +T + F+ DG + S+D +W + + DH + + + +
Sbjct: 77 MTFEGHTNNVTAIAFHCDGKWLATSSEDGTVKVW-DMRAPSVQRNYDHKSPVNDLLIHPN 135
Query: 64 TTYALTGGADFCFKIWKVATGVAVHSVSTRS--PVLRVEFSPDGSKLLIVLDAVMGHIGS 121
L+ + W + H + P+ + DGS L+ + G+
Sbjct: 136 QGELLSCDQSGRVRAWDLGENSCTHELIPEEDVPMSSITVGSDGSMLI-----AGNNKGN 190
Query: 122 IVVYSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYG 181
V+ ++ ++ ++ +P + ++ V S K++ D ++ +
Sbjct: 191 CYVWRMLNHQGASLL----QPVVKFQAHQRYITRCVLSPDV--KHLATCSADATVNIWST 244
Query: 182 ENGEFVQAKKI--HEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTY 232
E+ F+ +++ H++ + D FS D TY +T+S D VA L ++ + E ++ Y
Sbjct: 245 EDMSFMLERRLQGHQRWVWDCAFSADSTYLVTASSDHVARLWELSSGETIRQY 297
>7296209 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 700
Score = 50.1 bits (118), Expect = 5e-06
Identities = 43/180 (23%), Positives = 65/180 (35%), Gaps = 28/180 (15%)
Query: 7 KGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSI-------D 59
KGH + +K+ G L+ +CS D IW L HS I++I
Sbjct: 531 KGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNRDRCCHDLQAHSKEIYTIKWSPTGPG 590
Query: 60 VDESTTYALTGGADF--CFKIWKVATGVAVHSVSTRS-PVLRVEFSPDGSKLLIVLDAVM 116
+ T + A F ++W V G +H+++ + PV V FSPDG L
Sbjct: 591 TNNPNTNLILASASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSPDGKHLASGSFDKC 650
Query: 117 GHIGSIVVYSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQI 176
HI S L+ + G +F W+ G + A DG +
Sbjct: 651 VHIWSTQTGQLVHSYKG------------------TGGIFEVCWNSKGTKVGASASDGSV 692
>Hs20357529 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 49.7 bits (117), Expect = 6e-06
Identities = 63/326 (19%), Positives = 122/326 (37%), Gaps = 52/326 (15%)
Query: 6 LKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTT 65
L+GH + + + D L+ + S+D IW + ++ + S + + S
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 66 YALTGGAD-FCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGHIGSIVV 124
+ GG D C +++S+ TR +RV + GH G +
Sbjct: 111 FVACGGLDNIC----------SIYSLKTREGNVRVS------------RELPGHTGYLSC 148
Query: 125 YSLIRNENGEIVNVKEEPDYEITTIEQATK----------VFVASWSYNGKYIIAGHEDG 174
+ ++ +I+ + + IE + V S + +G+ ++G D
Sbjct: 149 CRFL--DDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDA 206
Query: 175 QISAYYGENGEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTYKA 234
I + + Q HE I + F P+ F T S D+ L D+ + L Y
Sbjct: 207 SIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSH 266
Query: 235 D---CPLNSASITPLKEFVILGGGQDAKDVTTTSAREGKFEARIYHKVFQDEIGRVKGHF 291
D C + S + + ++L G D F I+ + D G + GH
Sbjct: 267 DNIICGITSVAFSRSGR-LLLAGYDD-------------FNCNIWDAMKGDRAGVLAGHD 312
Query: 292 GPLNYVAVSPTGTSYASGGEDGYIRL 317
++ + V+ G + A+G D ++++
Sbjct: 313 NRVSCLGVTDDGMAVATGSWDSFLKI 338
>CE03274 [A] KOG0640 mRNA cleavage stimulating factor complex; subunit 1
Length = 430
Score = 49.7 bits (117), Expect = 6e-06
Identities = 59/253 (23%), Positives = 99/253 (38%), Gaps = 38/253 (15%)
Query: 4 IVLKGHERPLTQVKFNRDGDLVFACSKD---SVASIWYAINGER---------------- 44
I L H+ P FN DG LV S D + + + E+
Sbjct: 103 IYLTVHKAPCRAAAFNSDGSLVATGSADCSIKIMDVERILAREKEHREMNENGPDAHHPV 162
Query: 45 LGTLDDHSGTIWSIDVDESTTYALTGGADFCFKIW---KVATGVAVHSVSTRSPVLRVEF 101
+ TL DH + ++ + ++G D K++ K A A+ ++S PV +
Sbjct: 163 IRTLYDHVDDVNTVIFHPRDSILISGSNDKTVKLFDFSKTAVKKAMKTLSEVYPVRALSC 222
Query: 102 SPDGSKLLIVLDAVMGHIGSIVVYSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWS 161
P G LL+ D + +I + N PD + T E T V +S
Sbjct: 223 HPGGEFLLVATDHPTVRLYNIETAQAYASAN---------PDDQHT--ESVTDVH---YS 268
Query: 162 YNGKYIIAGHEDGQISAYYGENGEFVQA-KKIHE-KSIKDIQFSPDRTYFITSSRDSVAS 219
N + + +DG + + G + V+ K+ H+ SI +F+ + Y +TS DS+
Sbjct: 269 ENARLYVTASKDGHVKIWDGVSNRCVETFKRAHDGSSICSAKFTKNGKYILTSGMDSIVK 328
Query: 220 LVDVDTFEVLKTY 232
L ++ T L Y
Sbjct: 329 LWELSTNRCLIVY 341
>At2g41500 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 554
Score = 49.7 bits (117), Expect = 6e-06
Identities = 46/219 (21%), Positives = 83/219 (37%), Gaps = 25/219 (11%)
Query: 7 KGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTTY 66
+GH L +V F+ G + S D +W G L + HS +++ I +
Sbjct: 336 EGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGAL 395
Query: 67 ALTGGADFCFKIWKVATGVAVHSVSTR-SPVLRVEFSPDGSKLLIVLDAVMGHIGSIVVY 125
A + G D ++W + TG ++ PV V FSP+G L A G ++
Sbjct: 396 AASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHL-----ASGGEDNQCRIW 450
Query: 126 SLIRNENGEIV----NVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYG 181
L ++ I+ N+ + YE G ++ D +++ + G
Sbjct: 451 DLRMRKSLYIIPAHANLVSQVKYE---------------PQEGYFLATASYDMKVNIWSG 495
Query: 182 ENGEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASL 220
+ V++ HE + + + D + T S D L
Sbjct: 496 RDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKL 534
>7303841 [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 787
Score = 49.7 bits (117), Expect = 6e-06
Identities = 23/101 (22%), Positives = 43/101 (41%)
Query: 9 HERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTTYAL 68
H++ + V + + L+ S+D A +W A + G L H+ +WS+ L
Sbjct: 477 HDKEVNCVAYAPNNKLIATASQDKTAKVWLAESNTLQGVLRGHTRGVWSVRFSPVDQIVL 536
Query: 69 TGGADFCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLL 109
T +D +IW ++ + +LR EF G ++
Sbjct: 537 TSSSDCTLRIWSISNFSCIKRFDQECTILRAEFLDHGKFII 577
>CE27119 [R] KOG4155 FOG: WD40 repeat
Length = 451
Score = 49.3 bits (116), Expect = 8e-06
Identities = 44/202 (21%), Positives = 85/202 (41%), Gaps = 31/202 (15%)
Query: 128 IRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGENGEFV 187
I++ + EI+ ++EP T++Q + +S + KY+ G DG I Y EN +
Sbjct: 143 IQHSSNEII--RQEP---FPTVKQ---ISCLKYSRDAKYLAIGQLDGAIEMLYSENFKNY 194
Query: 188 QAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTF---------EVLKTYKA-DCP 237
++H I+ I+F P+ F+++ D + L + F + ++ Y A D P
Sbjct: 195 HKYEVHSMRIRKIEFLPNEERFLSACDDRLIKLHSLSEFTETDPSRSTKAIRVYSAHDAP 254
Query: 238 LNSASITPLKEFVILGGGQDAKDVTTTSAREGKFEARIYHKVFQDEIGRVKG-HFGPLNY 296
+ +I + T ++ + I+H I + H ++
Sbjct: 255 VTGLTI------------DEKSGGTRFASSSASSQIFIWHIEMTTPIMSITNEHTSTISA 302
Query: 297 VAVSPTGTSYASGGEDGYIRLH 318
++ SPT SGG+D I ++
Sbjct: 303 LSFSPTSRHLLSGGDDAMILIY 324
>At3g18130 [T] KOG0279 G protein beta subunit-like protein
Length = 326
Score = 49.3 bits (116), Expect = 8e-06
Identities = 37/176 (21%), Positives = 81/176 (46%), Gaps = 5/176 (2%)
Query: 8 GHERPLTQVKFNRDG--DLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTT 65
GH+ ++ V+F+ + + + S D +W N + +L HSG + ++ V +
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGS 206
Query: 66 YALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGHIGSIVVY 125
+GG D +W +A G ++S+ S + + FSP+ L + + I +
Sbjct: 207 LCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCFSPNRYWLCAATENSI-RIWDLESK 265
Query: 126 SLIRNENGEIVNVKEEPDYEITTIEQATKVFVAS--WSYNGKYIIAGHEDGQISAY 179
S++ + ++ + E+ + + T Q ++ S WS +G + +G+ DG + +
Sbjct: 266 SVVEDLKVDLKSEAEKNEGGVGTGNQKKVIYCTSLNWSADGSTLFSGYTDGVVRVW 321
>Hs7108333_2 [R] KOG4155 FOG: WD40 repeat
Length = 668
Score = 49.3 bits (116), Expect = 8e-06
Identities = 55/225 (24%), Positives = 95/225 (41%), Gaps = 15/225 (6%)
Query: 4 IVLKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDES 63
I L+GH+ + + ++ L+ + S D +W I G + H GT+ S D+
Sbjct: 458 IFLRGHQETVKDFRLLKNSRLL-SWSFDGTVKVWNIITGNKEKDFVCHQGTVLSCDISHD 516
Query: 64 TTYALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVE-FSPDGSKLLIVLDAVMGHIGSI 122
T + AD KIW + +H + + +R FS D + L A G I
Sbjct: 517 ATKFSSTSADKTAKIWSFDLLLPLHELRGHNGCVRCSAFSVDSTLL-----ATGDDNGEI 571
Query: 123 VVYSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGE 182
++++ NGE++++ P E V +S +GK +I+ G I +
Sbjct: 572 RIWNV---SNGELLHLC-APLSEEGAATHGGWVTDLCFSPDGKMLISA--GGYIKWWNVV 625
Query: 183 NGEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFE 227
GE Q + ++K I SPD ++T D++ L + T E
Sbjct: 626 TGESSQTFYTNGTNLKKIHVSPDFKTYVTV--DNLGILYILQTLE 668
>Hs4502123_2 [R] KOG4155 FOG: WD40 repeat
Length = 625
Score = 49.3 bits (116), Expect = 8e-06
Identities = 55/225 (24%), Positives = 95/225 (41%), Gaps = 15/225 (6%)
Query: 4 IVLKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDES 63
I L+GH+ + + ++ L+ + S D +W I G + H GT+ S D+
Sbjct: 415 IFLRGHQETVKDFRLLKNSRLL-SWSFDGTVKVWNIITGNKEKDFVCHQGTVLSCDISHD 473
Query: 64 TTYALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVE-FSPDGSKLLIVLDAVMGHIGSI 122
T + AD KIW + +H + + +R FS D + L A G I
Sbjct: 474 ATKFSSTSADKTAKIWSFDLLLPLHELRGHNGCVRCSAFSVDSTLL-----ATGDDNGEI 528
Query: 123 VVYSLIRNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGE 182
++++ NGE++++ P E V +S +GK +I+ G I +
Sbjct: 529 RIWNV---SNGELLHLC-APLSEEGAATHGGWVTDLCFSPDGKMLISA--GGYIKWWNVV 582
Query: 183 NGEFVQAKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFE 227
GE Q + ++K I SPD ++T D++ L + T E
Sbjct: 583 TGESSQTFYTNGTNLKKIHVSPDFKTYVTV--DNLGILYILQTLE 625
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.136 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,077,919
Number of Sequences: 60738
Number of extensions: 987732
Number of successful extensions: 5838
Number of sequences better than 1.0e-05: 107
Number of HSP's better than 0.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 86
Number of HSP's that attempted gapping in prelim test: 5015
Number of HSP's gapped (non-prelim): 511
length of query: 347
length of database: 30,389,216
effective HSP length: 107
effective length of query: 240
effective length of database: 23,890,250
effective search space: 5733660000
effective search space used: 5733660000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)