ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI1983 check: MH B KOG0389 Chromatin structure and dynamics SNF2 family DNA-dependent ATPase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI1983 707516 710659 1048
(1048 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YAL019w [B] KOG0389 SNF2 family DNA-dependent ATPase 836 0.0
SPCC1235.05c [B] KOG0389 SNF2 family DNA-dependent ATPase 601 e-171
SPAC25A8.01c [B] KOG0389 SNF2 family DNA-dependent ATPase 530 e-150
SPAC20G8.08c [B] KOG0389 SNF2 family DNA-dependent ATPase 513 e-145
Hs14149730 [B] KOG0389 SNF2 family DNA-dependent ATPase 456 e-128
CE16277 [B] KOG0389 SNF2 family DNA-dependent ATPase 421 e-117
7297570 [B] KOG0389 SNF2 family DNA-dependent ATPase 402 e-111
At2g02090 [B] KOG0389 SNF2 family DNA-dependent ATPase 310 6e-84
At5g19310 [BK] KOG0386 Chromatin remodeling complex SWI/SNF comp... 297 5e-80
YOR290c [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 297 7e-80
At3g06010 [BK] KOG0386 Chromatin remodeling complex SWI/SNF comp... 296 9e-80
7303422 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 295 2e-79
SPAC1250.01 [BK] KOG0386 Chromatin remodeling complex SWI/SNF co... 295 3e-79
Hs21071050 [BK] KOG0386 Chromatin remodeling complex SWI/SNF com... 292 2e-78
Hs21071048 [BK] KOG0386 Chromatin remodeling complex SWI/SNF com... 292 2e-78
Hs21071058 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 292 2e-78
YIL126w [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 290 6e-78
Hs21071056 [BK] KOG0386 Chromatin remodeling complex SWI/SNF com... 290 8e-78
7294205 [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 287 5e-77
YBR245c [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 286 1e-76
CE27114 [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 286 1e-76
YFR038w [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 286 2e-76
CE00789 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 284 4e-76
YOR304w [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 283 1e-75
SPBP35G2.10 [R] KOG0383 Predicted helicase 283 1e-75
CE05553 [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 280 8e-75
Hs21071044 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 278 4e-74
At5g66750 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 276 9e-74
ECU10g1320 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 273 1e-72
At5g44800 [R] KOG0383 Predicted helicase 272 2e-72
7295870 [K] KOG0384 Chromodomain-helicase DNA-binding protein 271 5e-72
Hs4557449 [K] KOG0384 Chromodomain-helicase DNA-binding protein 270 1e-71
Hs20536191 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 270 1e-71
At5g18620 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 269 2e-71
At3g06400 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 266 1e-70
Hs21914927 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 262 2e-69
CE18196 [K] KOG0384 Chromodomain-helicase DNA-binding protein 262 2e-69
Hs22047300 [K] KOG0384 Chromodomain-helicase DNA-binding protein 260 9e-69
CE03657 [R] KOG0383 Predicted helicase 259 2e-68
ECU01g0350 [K] KOG0384 Chromodomain-helicase DNA-binding protein 259 2e-68
SPAC3G6.01 [K] KOG0384 Chromodomain-helicase DNA-binding protein 258 3e-68
Hs4557447 [K] KOG0384 Chromodomain-helicase DNA-binding protein 258 3e-68
Hs20533808 [R] KOG0383 Predicted helicase 258 3e-68
YER164w [K] KOG0384 Chromodomain-helicase DNA-binding protein 257 8e-68
CE11572 [K] KOG0384 Chromodomain-helicase DNA-binding protein 257 8e-68
At2g13370 [K] KOG0384 Chromodomain-helicase DNA-binding protein 257 8e-68
Hs21362042 [K] KOG0384 Chromodomain-helicase DNA-binding protein 256 2e-67
7293795 [R] KOG0383 Predicted helicase 255 3e-67
Hs22047966 [K] KOG0384 Chromodomain-helicase DNA-binding protein 254 4e-67
At2g25170 [R] KOG0383 Predicted helicase 253 1e-66
CE17716 [R] KOG0383 Predicted helicase 251 3e-66
At2g28290 [BK] KOG0386 Chromatin remodeling complex SWI/SNF comp... 251 5e-66
YPL082c [K] KOG0392 SNF2 family DNA-dependent ATPase domain-cont... 250 7e-66
Hs21071046 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 248 4e-65
Hs4557451 [R] KOG0383 Predicted helicase 244 4e-64
Hs4557453 [R] KOG0383 Predicted helicase 244 7e-64
At2g46020 [BK] KOG0386 Chromatin remodeling complex SWI/SNF comp... 243 1e-63
SPAC1783.05 [K] KOG0384 Chromodomain-helicase DNA-binding protein 243 1e-63
SPBC1826.01c [K] KOG0392 SNF2 family DNA-dependent ATPase domain... 238 4e-62
Hs17454125 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-c... 234 5e-61
Hs4557565 [KL] KOG0387 Transcription-coupled repair protein CSB/... 233 2e-60
7300091 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-cont... 232 3e-60
At2g44980 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 224 7e-58
ECU09g0410 [KL] KOG0387 Transcription-coupled repair protein CSB... 223 9e-58
At3g54280 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-co... 222 3e-57
At2g18760 [KL] KOG0387 Transcription-coupled repair protein CSB/... 219 2e-56
At1g03750 [KL] KOG0387 Transcription-coupled repair protein CSB/... 216 1e-55
YJR035w [KL] KOG0387 Transcription-coupled repair protein CSB/RA... 213 2e-54
SPCP25A2.02c [KL] KOG0387 Transcription-coupled repair protein C... 209 2e-53
CE25717 [R] KOG0391 SNF2 family DNA-dependent ATPase 203 1e-51
Hs5730067 [R] KOG0391 SNF2 family DNA-dependent ATPase 203 1e-51
YGL163c [L] KOG0390 DNA repair protein SNF2 family 202 2e-51
CE15856 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-cont... 199 2e-50
SPAC15A10.03c [L] KOG0390 DNA repair protein SNF2 family 198 3e-50
YGL150c [L] KOG0388 SNF2 family DNA-dependent ATPase 198 4e-50
YDR334w [R] KOG0391 SNF2 family DNA-dependent ATPase 198 4e-50
Hs4506397 [L] KOG0390 DNA repair protein SNF2 family 195 3e-49
Hs6912622_2 [L] KOG0390 DNA repair protein SNF2 family 194 5e-49
ECU09g1890 [L] KOG0388 SNF2 family DNA-dependent ATPase 194 6e-49
At3g57300 [L] KOG0388 SNF2 family DNA-dependent ATPase 192 2e-48
YBR073w [L] KOG0390 DNA repair protein SNF2 family 190 9e-48
At3g12810 [R] KOG0391 SNF2 family DNA-dependent ATPase 190 9e-48
CE11028 [KL] KOG0387 Transcription-coupled repair protein CSB/RA... 187 6e-47
CE25143 [L] KOG0390 DNA repair protein SNF2 family 187 7e-47
7295868 [L] KOG0390 DNA repair protein SNF2 family 186 2e-46
At3g19210 [L] KOG0390 DNA repair protein SNF2 family 180 1e-44
At1g08600 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box ... 172 3e-42
SPAC22F3.03c [L] KOG0390 DNA repair protein SNF2 family 169 2e-41
CE23323 [L] KOG0390 DNA repair protein SNF2 family 168 5e-41
SPAC3G6.12 [L] KOG0388 SNF2 family DNA-dependent ATPase 163 1e-39
SPBC582.10c [KL] KOG1001 Helicase-like transcription factor HLTF... 160 7e-39
YBR114w [L] KOG1002 Nucleotide excision repair protein RAD16 158 5e-38
SPCC330.01c [L] KOG1002 Nucleotide excision repair protein RAD16 156 2e-37
CE14110 [KL] KOG4439 RNA polymerase II transcription termination... 153 1e-36
CE11083 [KL] KOG4439 RNA polymerase II transcription termination... 153 2e-36
7300511 [L] KOG0388 SNF2 family DNA-dependent ATPase 153 2e-36
At1g02670 [L] KOG1002 Nucleotide excision repair protein RAD16 152 2e-36
Hs15805014 [R] KOG0391 SNF2 family DNA-dependent ATPase 141 5e-33
Hs17437081 [B] KOG0389 SNF2 family DNA-dependent ATPase 141 6e-33
Hs19923174 [KL] KOG4439 RNA polymerase II transcription terminat... 135 3e-31
ECU03g1530 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-c... 132 2e-30
7296236 [K] KOG0384 Chromodomain-helicase DNA-binding protein 131 6e-30
Hs13376715 [K] KOG0384 Chromodomain-helicase DNA-binding protein 127 1e-28
At4g31900 [R] KOG0383 Predicted helicase 120 1e-26
Hs4757978 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 119 3e-26
HsM8922362 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 118 4e-26
Hs14767157 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 118 4e-26
SPAC17A2.12 [KL] KOG1001 Helicase-like transcription factor HLTF... 117 9e-26
HsM14149926 [K] KOG0384 Chromodomain-helicase DNA-binding protein 115 5e-25
YOR191w [KL] KOG1001 Helicase-like transcription factor HLTF/DNA... 114 1e-24
At2g21450 [L] KOG0390 DNA repair protein SNF2 family 113 1e-24
SPBC23E6.02 [KL] KOG1001 Helicase-like transcription factor HLTF... 110 2e-23
At1g05120 [L] KOG1002 Nucleotide excision repair protein RAD16 108 4e-23
At5g22750 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 107 1e-22
At1g05480 [L] KOG0390 DNA repair protein SNF2 family 106 2e-22
7301343 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box su... 106 2e-22
At5g63950 [KL] KOG0387 Transcription-coupled repair protein CSB/... 105 3e-22
At1g50410 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 103 1e-21
At3g20010 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 102 2e-21
At3g24340 [L] KOG0390 DNA repair protein SNF2 family 102 4e-21
At1g11100 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 101 5e-21
At1g61140 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 101 7e-21
At5g43530 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 100 9e-21
7293730 [R] KOG0383 Predicted helicase 100 2e-20
Hs20336209 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box... 99 3e-20
Hs20336207 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box... 99 3e-20
Hs20336205 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box... 99 3e-20
At2g16390 [L] KOG0390 DNA repair protein SNF2 family 99 3e-20
SPCC1620.14c [BK] KOG0386 Chromatin remodeling complex SWI/SNF c... 97 1e-19
At5g05130 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 97 2e-19
CE17477 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily 96 4e-19
Hs21071052 [KL] KOG1001 Helicase-like transcription factor HLTF/... 95 7e-19
YLR032w [KL] KOG1001 Helicase-like transcription factor HLTF/DNA... 92 4e-18
7298963 [KL] KOG4439 RNA polymerase II transcription termination... 90 2e-17
7291744 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily 90 2e-17
CE17314 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box su... 89 3e-17
At1g48310 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1... 87 2e-16
CE27689 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 D... 86 2e-16
CE27688 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 D... 86 2e-16
Hs20538502 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily 86 3e-16
At5g07810 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1... 86 4e-16
7296909 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 D... 84 1e-15
7298962 [KL] KOG4439 RNA polymerase II transcription termination... 83 2e-15
CE11450 [KL] KOG4439 RNA polymerase II transcription termination... 80 2e-14
At2g40770 [L] KOG0298 DEAD box-containing helicase-like transcri... 77 2e-13
ECU06g0820 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL... 75 7e-13
SPAC13G6.01c [KL] KOG1001 Helicase-like transcription factor HLT... 73 2e-12
Hs21071060 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL... 72 3e-12
At3g16600 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 72 5e-12
SPAC144.05 [L] KOG0298 DEAD box-containing helicase-like transcr... 70 2e-11
Hs22048060 [K] KOG0384 Chromodomain-helicase DNA-binding protein 68 7e-11
Hs20532976 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL... 68 7e-11
YLR247c [L] KOG0298 DEAD box-containing helicase-like transcript... 67 1e-10
Hs17441908 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL... 65 4e-10
7295362 [L] KOG0298 DEAD box-containing helicase-like transcript... 64 9e-10
CE23294 [KL] KOG4439 RNA polymerase II transcription termination... 61 8e-09
Hs22054523 [L] KOG0298 DEAD box-containing helicase-like transcr... 61 1e-08
At5g20420 [L] KOG0390 DNA repair protein SNF2 family 60 1e-08
At3g42670 [L] KOG0390 DNA repair protein SNF2 family 60 2e-08
At2g25020 [L] KOG0390 DNA repair protein SNF2 family 56 3e-07
>YAL019w [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 1131
Score = 836 bits (2160), Expect = 0.0
Identities = 421/587 (71%), Positives = 485/587 (81%), Gaps = 8/587 (1%)
Query: 468 RARTKQKKTSITQLRNNQMKFIRQKPKLLSSDVELKDYQQTGINWLHLLYQNDLSCILAD 527
R T T+ R +KF + KP+LLS ++ LKDYQQTGINWL+LLYQN +SCILAD
Sbjct: 538 RKNTHVISTTSRNGRKPIVKFFKGKPRLLSPEISLKDYQQTGINWLNLLYQNKMSCILAD 597
Query: 528 EMGLGKTCQVISFLAYLKQTHHNGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQE 587
+MGLGKTCQVISF AYLKQ + GPHLVVVPSSTLENWLREF KF P LK+EPYYGS QE
Sbjct: 598 DMGLGKTCQVISFFAYLKQINEPGPHLVVVPSSTLENWLREFQKFAPALKIEPYYGSLQE 657
Query: 588 RAELRDILEENEGQYDVIVTTYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFN 647
R ELRDILE N G+YDVIVTTYNLAAG KYDVSFL+NRNF+VVVYDEGHMLKNS SERF
Sbjct: 658 REELRDILERNAGKYDVIVTTYNLAAGNKYDVSFLKNRNFNVVVYDEGHMLKNSTSERFA 717
Query: 648 KLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKG 707
KLMKI A+FRLLLTGTPLQNNLKELMSLLEFIMPNLF+SKK+ +FKQ+ +T+D +K
Sbjct: 718 KLMKIRANFRLLLTGTPLQNNLKELMSLLEFIMPNLFISKKESFDAIFKQRAKTTDDNKN 777
Query: 708 YNPLLAEHAIERAKTMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQV 767
+NPLLA+ AI RAKTMMKPFILRR+KDQVLKHLP KH HI +CE+ +QK +Y +EI+ V
Sbjct: 778 HNPLLAQEAITRAKTMMKPFILRRRKDQVLKHLPPKHTHIQYCELNAIQKKIYDKEIQIV 837
Query: 768 MEHRRKIKEG------VKMEKASRNVSKNLIMALRKASIHPLLFRHIYNDXXXXXXXXXX 821
+EH+R IK+G + K + SKNLIMALRKAS+HPLLFR+IYND
Sbjct: 838 LEHKRMIKDGELPKDAKEKSKLQSSSSKNLIMALRKASLHPLLFRNIYNDKIITKMSDAI 897
Query: 822 XXEPEYYENGNIEYIKEDMSYMTDFELHKLCCKFP-SLYKFKLQSDEWMNSGKVEQLKSV 880
EP Y ENGN EYIKEDMSYMTDFELHKLCC FP +L K++L +DEWM SGK++ LK +
Sbjct: 898 LDEPAYAENGNKEYIKEDMSYMTDFELHKLCCNFPNTLSKYQLHNDEWMQSGKIDALKKL 957
Query: 881 LHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDT 940
L II + EKVL+FSLFTQVLDILE VLSTL+ KFLRLDG TQVNDRQ LID+FYED
Sbjct: 958 LKTIIVDKQEKVLIFSLFTQVLDILEMVLSTLDYKFLRLDGSTQVNDRQLLIDKFYEDKD 1017
Query: 941 IPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRD 1000
IP+F+LSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEV +TTLI++D
Sbjct: 1018 IPIFILSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVNITTLITKD 1077
Query: 1001 TIEEKILHLAKNKLALDTHISQEDKKNEEALENKVTDLLEDIIFDEN 1047
+IEEKI LAKNKLALD++IS EDKK+++ LE+KV+D+LEDII+DEN
Sbjct: 1078 SIEEKIHQLAKNKLALDSYIS-EDKKSQDVLESKVSDMLEDIIYDEN 1123
Score = 195 bits (495), Expect = 4e-49
Identities = 145/457 (31%), Positives = 225/457 (48%), Gaps = 62/457 (13%)
Query: 11 NKQDEVQVPSSSPLLQTNEESSPLRPETGTRIDEXXXXXXXXXXLLRDKFTYQPATKARN 70
++ D VQVP +S + SSPL+P + T D LR +FT++P+ +
Sbjct: 8 DEDDVVQVPETSSPTKV-ASSSPLKPTSPTVPDASVAS-------LRSRFTFKPSDPSEG 59
Query: 71 GYSQNDL---SHEQALKVLVQEYKDLSPTLINAIFKQNSMSISSSRKRLDHIVASRTGGS 127
++ L S E AL L +E+ D S TL+ A+FK NS ++ S+R+RL + R +
Sbjct: 60 AHTSKPLPSGSPEVALVNLAREFPDFSQTLVQAVFKSNSFNLQSARERLTRLRQQRQNWT 119
Query: 128 WRFQSKTNVNPTLNLNKPNSPMDLSKSRLISLKEGGSSGNSIKSNPAINLPSRNVSTSKI 187
W N +P K +P + KS + L G +SI N N +SKI
Sbjct: 120 WN----KNASP----KKSETPPPVKKS--LPLANTGRL-SSIHGNI-------NNKSSKI 161
Query: 188 TIEKQKTSIFDRYSHVMKVSQPS---PARSMADRTTMSTIKNLSSKKGKLVRGDA----- 239
T+ KQKTSIFDRYS+V+ Q + P D +S + +KK +LVR D
Sbjct: 162 TVAKQKTSIFDRYSNVINQKQYTFELPTNLNIDSEALSKLPVNYNKKRRLVRADQHPIGK 221
Query: 240 -----------------IKKKQKIKLSDDEEDEITDQSNDDGELDTEPEYEEKVTESNFD 282
+K +D++E+E DD + + +Y E + N D
Sbjct: 222 SYESSATQLGSAREKLLANRKYGRHANDNDEEEEESMMTDDDDASGD-DYTESTPQINLD 280
Query: 283 -QVLKFLNEADPKDLADLGEISIEKAALVIKERPFEDLEQFQQLDFQSKSPSPAPGKARK 341
QVL+F+N++D DL+DL + ++ KA L+ RP+ L F +F K RK
Sbjct: 281 EQVLQFINDSDIVDLSDLSDTTMHKAQLIASHRPYSSLNAFVNTNFNDKDTEENASNKRK 340
Query: 342 SQ---QKKDGLKILDKIEQSIKGYNAIESLIRKCSKYGDVIANQMTNWGVDFSSSKDTEL 398
+ + ++LDKI QSI+GYNAIES+I+KCS YGD++ +QM WGV ++EL
Sbjct: 341 RRAAASANESERLLDKITQSIRGYNAIESVIKKCSSYGDLVTSQMKKWGVQVEGD-NSEL 399
Query: 399 NILDVDTYSDDEANE--TITNDSANVQIIKSSTTSRE 433
+++++ DD+ ++ N+S N + TS+E
Sbjct: 400 DLMNLGEDDDDDNDDGNNDNNNSNNNNTAGADATSKE 436
>SPCC1235.05c [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 1284
Score = 601 bits (1549), Expect = e-171
Identities = 314/564 (55%), Positives = 404/564 (70%), Gaps = 15/564 (2%)
Query: 487 KFIRQKPKLLSSDVELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQ 546
KF+ ++PK L+SDV+LK YQ G+NWLHLLYQ LS ILADEMGLGKTCQV++F A L +
Sbjct: 535 KFVTEQPKTLASDVQLKSYQLVGVNWLHLLYQQKLSGILADEMGLGKTCQVVAFFALLLE 594
Query: 547 THHNGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQYDVIV 606
H+GPHLVVVPSSTLENWLRE +FCP L+VEPYYGSQQERA +R+ +EENE +YD++V
Sbjct: 595 QGHHGPHLVVVPSSTLENWLRELARFCPSLRVEPYYGSQQERANIREAIEENEIKYDILV 654
Query: 607 TTYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQ 666
TTY LA K D SFL+++NFDV VYDEGH LKN MSER+ LM +NA+FRLLLTGTPLQ
Sbjct: 655 TTYQLATNNKEDRSFLKHQNFDVCVYDEGHYLKNRMSERYKHLMNLNANFRLLLTGTPLQ 714
Query: 667 NNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKP 726
NNLKEL+SLL FI+PN+F S DDL +FK K T+DAD LL++ I RAKTMM P
Sbjct: 715 NNLKELVSLLAFILPNMFDSDMDDLDVIFKAKP-TADADI-EQALLSKQRISRAKTMMTP 772
Query: 727 FILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRN 786
F+LRR+K+QVL LP+K I HC+++E Q +Y + ++ ++++ K K S+N
Sbjct: 773 FVLRRRKNQVLNDLPKKTQIIEHCKLSENQLEIYNR--YAALQKNQQLRRDDKRNKRSKN 830
Query: 787 VSK---------NLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIK 837
+ +++M LRKA+ H LLFR Y+D E E Y+N N +YI
Sbjct: 831 DEESDGKSLSAGHVLMQLRKAANHALLFRKFYDDEKLKQMAKDIMQE-EQYKNANEQYIY 889
Query: 838 EDMSYMTDFELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSL 897
EDM M+DFELH+LC FP+L + L+ D WM+SGK+ LK +L K+ + + ++L+FS
Sbjct: 890 EDMEVMSDFELHRLCRSFPTLQSYTLKDDPWMDSGKIRVLKELLPKMKE-EGSRILLFSQ 948
Query: 898 FTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKAGGFGINL 957
FTQ+LDILE VL TL I ++RLDG TQV RQ +ID+F++++ + VFLLSTKAGGFGINL
Sbjct: 949 FTQMLDILEQVLDTLKISYVRLDGSTQVEVRQDIIDQFHKEEDVTVFLLSTKAGGFGINL 1008
Query: 958 VCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALD 1017
CAN VI++D S+NP DD QA DRAHRVGQ +EV V LI+ +TIEE I LA KLALD
Sbjct: 1009 ACANVVILYDCSYNPFDDLQAEDRAHRVGQVREVTVIRLITDNTIEEYIQKLANTKLALD 1068
Query: 1018 THISQEDKKNEEALENKVTDLLED 1041
+S + K EE E V D+L++
Sbjct: 1069 MSLSSDGKDREEIGERLVQDMLDE 1092
Score = 84.0 bits (206), Expect = 1e-15
Identities = 64/246 (26%), Positives = 115/246 (46%), Gaps = 33/246 (13%)
Query: 170 KSNPAINLPSRNVSTSKITIEKQKTSIFDRYSHVMKVSQPSPARSMADRTTMSTIKNLSS 229
+S A N+P+ +S T++ QK SI D+Y + S + R T + K L++
Sbjct: 318 QSPVASNMPT--YGSSNRTVQSQKRSIRDKYIQMPNDSTQASLMPSYTRKTSNASKKLTT 375
Query: 230 KKGKLVRGDAIKKKQKIKLSDDEEDEITDQSNDDGELDTEPE-YEEKVTESNFDQVLKFL 288
EEDE D + EPE + T + VL F+
Sbjct: 376 ----------------------EEDEFYDS-------EEEPEAIVHRDTSALERTVLNFI 406
Query: 289 NEADPKDLADLGEISIEKAALVIKERPFEDLEQFQQLDFQSKSPSPAPGKARKSQQKKDG 348
N + K+L+D + + L+++ RPF+ L + + PS + R+ ++ G
Sbjct: 407 NSSTAKELSDTASCPLSHSKLLLEHRPFQTLAEACIIKHPDDVPSKPGRRGRRREKNPMG 466
Query: 349 LKILDKIEQSIKGYNAIESLIRKCSKYGDVIANQMTNWGVDFSSSKDTELNILDVDTYSD 408
KI++ ++++GY AI++LI KC G+ I+ M +WG+ S + ELNI+D+++
Sbjct: 467 QKIVNACMETMEGYYAIDNLIAKCEFLGNRISKGMASWGIKLEMS-NGELNIVDMESVPT 525
Query: 409 DEANET 414
+ A+ +
Sbjct: 526 EAADNS 531
>SPAC25A8.01c [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 922
Score = 530 bits (1364), Expect = e-150
Identities = 282/543 (51%), Positives = 370/543 (67%), Gaps = 15/543 (2%)
Query: 488 FIRQKPKLLSSDVELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQT 547
FI P S D++L+DYQ GINWL+LLY+ L+ ILADEMGLGKTCQ I+F + L
Sbjct: 373 FITTPPASFSPDIKLQDYQIIGINWLYLLYELKLAGILADEMGLGKTCQTIAFFSLLMDK 432
Query: 548 HHNGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQYDVIVT 607
+ NGPHLV+ P+ST+ENWLREF KFCP LK+E YYGSQ ER E+R+ + N+ Y+V++T
Sbjct: 433 NINGPHLVIAPASTMENWLREFAKFCPKLKIELYYGSQVEREEIRERINSNKDSYNVMLT 492
Query: 608 TYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQN 667
TY LAA +K D FLRN+ F+V VYDEGH LKN SER+ LM I A FR+LLTGTPLQN
Sbjct: 493 TYRLAATSKADRLFLRNQKFNVCVYDEGHYLKNRASERYRHLMSIPADFRVLLTGTPLQN 552
Query: 668 NLKELMSLLEFIMPNLFVSKKDDLATVF-KQKTRTSDADKGYNPLLAEHAIERAKTMMKP 726
NLKEL+SLL FI+P++F L +F +K+ SD ++ LL+E + RAK MM P
Sbjct: 553 NLKELISLLAFILPHVFDYGLKSLDVIFTMKKSPESDFERA---LLSEQRVSRAKMMMAP 609
Query: 727 FILRRKKDQVLKHLPRKHNHILHCEMTELQKTLY-----QQEIKQVMEH---RRKIKEGV 778
F+LRRKK QVL LP+K I CE +E ++ Y +Q + +++ + +
Sbjct: 610 FVLRRKKSQVLDALPKKTRIIEFCEFSEEERRRYDDFASKQSVNSLLDENVMKTNLDTNA 669
Query: 779 KMEKASRNVSKNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKE 838
+ K ++ + +++ LRK + HP+LFR Y D EP+ Y+ N YI E
Sbjct: 670 NLAK-KKSTAGFVLVQLRKLADHPMLFRIHYKDDILRQMAKAIMNEPQ-YKKANELYIFE 727
Query: 839 DMSYMTDFELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLF 898
DM YM+D ELH LCCKFPS+ F+L+ + WM++ KV +LK +L ++ ++V++FS F
Sbjct: 728 DMQYMSDIELHNLCCKFPSINSFQLKDEPWMDATKVRKLKKLLTNAVE-NGDRVVLFSQF 786
Query: 899 TQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKAGGFGINLV 958
TQVLDIL+ V+ +LN+KFLR DG TQV+ RQ LID+FY D++I VFLLSTKAGGFGINL
Sbjct: 787 TQVLDILQLVMKSLNLKFLRFDGSTQVDFRQDLIDQFYADESINVFLLSTKAGGFGINLA 846
Query: 959 CANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDT 1018
CAN VI++D SFNP DD QA DRAHRVGQ KEV V + +DTIEE I LA K+ALD
Sbjct: 847 CANMVILYDVSFNPFDDLQAEDRAHRVGQKKEVTVYKFVVKDTIEEHIQRLANAKIALDA 906
Query: 1019 HIS 1021
+S
Sbjct: 907 TLS 909
Score = 70.5 bits (171), Expect = 1e-11
Identities = 44/159 (27%), Positives = 84/159 (52%), Gaps = 11/159 (6%)
Query: 253 EDEITDQSNDDGELDTEPEYEEKV----TESNFDQVLKFLNEADPKDLADLGEISIEKAA 308
E E D SNDD D + + T + ++VLK++N +DLAD+ ++ +A
Sbjct: 206 EPEADDDSNDDMYSDDDSNADRWASRIDTAALKEEVLKYMNRCSTQDLADMTGCTLAEAE 265
Query: 309 LVIKERPFEDLEQFQQLDFQSKSPSPAPGKARKSQQKKD--GLKILDKIEQSIKGYNAIE 366
++ +RPF DLE + K P P K R+ +++K G +++ + ++GY ++
Sbjct: 266 FMVAKRPFPDLESALVV----KQPRPVIPKGRRGRREKTPLGPRLVGICMEIMRGYFVVD 321
Query: 367 SLIRKCSKYGDVIANQMTNWGVDFSSSKDT-ELNILDVD 404
+LIR+C + G I + WG+ +++ D E ++++ D
Sbjct: 322 ALIRQCEQLGGKIQRGIEAWGLSNTATSDEGETSLVNFD 360
>SPAC20G8.08c [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 944
Score = 513 bits (1320), Expect = e-145
Identities = 283/554 (51%), Positives = 372/554 (67%), Gaps = 29/554 (5%)
Query: 491 QKPKLLSSDVELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHHN 550
Q+P ++S + LK YQ G+NWL L+Y+ LS ILADEMGLGKTCQVISFLA LK+
Sbjct: 403 QQPSSIASGITLKSYQIVGLNWLCLMYKAKLSGILADEMGLGKTCQVISFLASLKEKGIQ 462
Query: 551 GPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQYDVIVTTYN 610
HLVVVPSSTL NWLREF KFCP L+VE Y G+Q ER R L + + +DV+VTTY
Sbjct: 463 NRHLVVVPSSTLGNWLREFEKFCPSLRVESYSGTQSERINKRYYLMDTD--FDVLVTTYQ 520
Query: 611 LAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLK 670
LA+G++ D SFLR + FD+ ++DEGH LKN MSER+ LM I A+FRLL+TGTPLQNNLK
Sbjct: 521 LASGSRDDRSFLRKQRFDISIFDEGHYLKNRMSERYKHLMNIPANFRLLITGTPLQNNLK 580
Query: 671 ELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDAD--KGYNPLLAEHAIERAKTMMKPFI 728
EL+SLL F++P +F + L ++K KT TSD D + Y L++ I RAKT+M PFI
Sbjct: 581 ELISLLAFMLPKVFDNNMQGLDIIYKIKT-TSDGDIERAY---LSQERISRAKTIMNPFI 636
Query: 729 LRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQ--EIKQVMEHRRKIKEGVKMEKASRN 786
LRR+K+ VL LP K H+ +C M E Q +LY E+K ++ R+
Sbjct: 637 LRRRKENVLSDLPPKIQHVEYCHMEETQLSLYLSVLELKNLVNANRE------------- 683
Query: 787 VSKNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDF 846
N++M LRKA++H LLFR YN E Y + N +YI EDM M+DF
Sbjct: 684 ---NILMQLRKAALHQLLFRSQYNLETLSLMSKRILREDAYLD-ANPQYIFEDMEVMSDF 739
Query: 847 ELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILE 906
ELHKL ++ L+ F L+ WM+S KV++L S+L K +E++L+FS FTQVLDILE
Sbjct: 740 ELHKLADQYRHLHPFALKGKPWMDSAKVKKLCSLLKK--SRPNERILIFSQFTQVLDILE 797
Query: 907 FVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKAGGFGINLVCANNVIIF 966
+VL+TL+++FLRLDG T V RQ LID F+ ++ VFLLSTK+GGFGINL CAN VI+F
Sbjct: 798 YVLNTLDLEFLRLDGSTPVETRQQLIDDFHTNENYKVFLLSTKSGGFGINLTCANIVILF 857
Query: 967 DQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQEDKK 1026
D SFNP DD QA DRAHRVGQT+ V V LI+++TIEE I LA KL L++ ++ + +K
Sbjct: 858 DCSFNPFDDMQAEDRAHRVGQTRPVHVYRLITKNTIEENIRRLANTKLTLESSLTTDSEK 917
Query: 1027 NEEALENKVTDLLE 1040
++ + ++ L+
Sbjct: 918 IQKEISGELMKSLQ 931
Score = 77.4 bits (189), Expect = 1e-13
Identities = 54/182 (29%), Positives = 93/182 (50%), Gaps = 25/182 (13%)
Query: 236 RGDAIKKKQKIKLSDDE--EDEITDQS----NDDGELDTE-PEYEEKVTE---------- 278
+G K + I+LSD+E ED++ QS D +D PE +K+ E
Sbjct: 205 QGQKKKPLRVIELSDEETNEDDLLGQSPTACTTDANIDNSIPENSDKIEEVSIESSGPSE 264
Query: 279 -----SNFD-QVLKFLNEADPKDLADLGEISIEKAALVIKERPFEDLEQFQQLDFQSKSP 332
S +D +VL FLNE+ +++ ++ + I +RPF LE+ + L ++
Sbjct: 265 VEDEMSEYDVRVLNFLNESTLQEIVEVSGCESKVVEYFISKRPFPSLEKAEALC--QRNA 322
Query: 333 SPAPGKARKSQQKKDGLKILDKIEQSIKGYNAIESLIRKCSKYGDVIANQMTNWGVDFSS 392
A GK +KS + G K+++ + ++G++A++SLI KC +YG +I+N M +W F
Sbjct: 323 HAATGKRKKSDGRNVGRKLVNSTYEVLQGFDAVDSLIAKCERYGAMISNTMRSWHNLFDD 382
Query: 393 SK 394
K
Sbjct: 383 KK 384
>Hs14149730 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 1026
Score = 456 bits (1174), Expect = e-128
Identities = 255/563 (45%), Positives = 356/563 (62%), Gaps = 14/563 (2%)
Query: 478 ITQLRNNQMKFIRQKPKLLSSDVELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQV 537
+T L N + ++P +L+ + LK YQ+ G+NWL L++++ L+ ILADEMGLGKT Q
Sbjct: 473 VTMLTGNGGGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQA 532
Query: 538 ISFLAYLKQTHHNGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEE 597
I+FLAYL Q +NGPHL+VVP+ST++NWLRE N +CP LKV YYGSQ+ER ++R +
Sbjct: 533 IAFLAYLYQEGNNGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRFNIHS 592
Query: 598 NEGQYDVIVTTYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFR 657
Y+VIVTTYN A + D S R + ++DEGHMLKN S R+ LM INA+ R
Sbjct: 593 RYEDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNR 652
Query: 658 LLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAI 717
LLLTGTP+QNNL ELMSLL F+MP++F S ++ +F KT+++D Y + I
Sbjct: 653 LLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYE----KERI 708
Query: 718 ERAKTMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEG 777
AK ++KPFILRR K++VLK LP K + I C M+E Q+ LY ++ + +++
Sbjct: 709 AHAKQIIKPFILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNLEKN 768
Query: 778 VKMEKASRNVSKNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIK 837
+M N++M LRK + HPLL R Y EP + E N + I
Sbjct: 769 TEM--------CNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCE-ANPDLIF 819
Query: 838 EDMSYMTDFELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSL 897
EDM MTDFELH LC ++ + F+L D ++SGK L +L ++ + ++V++FS
Sbjct: 820 EDMEVMTDFELHVLCKQYRHINNFQLDMDLILDSGKFRVLGCILSELKQ-KGDRVVLFSQ 878
Query: 898 FTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKAGGFGINL 957
FT +LDILE +L ++LRLDG+TQ+++R LID F D I VFLLSTKAGG GINL
Sbjct: 879 FTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINL 938
Query: 958 VCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALD 1017
AN VI+ D NP++D+QA DR HRVGQTKEV V LIS+ TIEE +L + + KL L+
Sbjct: 939 TSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLE 998
Query: 1018 THISQEDKKNEEALENKVTDLLE 1040
++ D+ +E ++ + LL+
Sbjct: 999 QDMTTVDEGDEGSMPADIATLLK 1021
>CE16277 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 1038
Score = 421 bits (1083), Expect = e-117
Identities = 230/528 (43%), Positives = 325/528 (60%), Gaps = 14/528 (2%)
Query: 495 LLSSDVELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHHNGPHL 554
LL L DYQ G+ WL ++Y DL+ IL DEMGLGKT Q+++FL+YLKQ GPHL
Sbjct: 387 LLKEGCTLHDYQLIGVKWLIMMYNKDLNAILGDEMGLGKTIQIVAFLSYLKQIGKTGPHL 446
Query: 555 VVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQYDVIVTTYNLAAG 614
+VVPSST+ENW+ EF+K+CP +++ YYGSQ ER LR +++ + DVI+TTYN+
Sbjct: 447 IVVPSSTIENWIGEFHKWCPSIQLLTYYGSQDERKHLRHRVKKQKDHIDVILTTYNMVTS 506
Query: 615 TKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMS 674
D F +N + + V+YDEGHMLKN SER+ LMK+ ++LLTGTPLQNNL EL+S
Sbjct: 507 KSDDKKFFKNFSLNYVIYDEGHMLKNCDSERYRGLMKVKGKKKILLTGTPLQNNLIELIS 566
Query: 675 LLEFIMPNLFVSKKDDLATVFKQKTRTSDA-DKGYNPLLAEHAIERAKTMMKPFILRRKK 733
L+ F++ +F +D+ + + + A D L + IE AK +++P+ILRR K
Sbjct: 567 LMYFVLSKVFNKYCEDITHLLQHFKQLGPALDTKNKALYQQDRIEEAKAILQPYILRRLK 626
Query: 734 DQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSKNLIM 793
+QVL LP K I+ EM + QK LY I E ++ + S + S +M
Sbjct: 627 NQVLGSLPSKSEQIIEVEMKKPQKQLYD-----------NIVEALQQSEESGD-SYGSLM 674
Query: 794 ALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFELHKLCC 853
LR+A+ HPLL R Y D + Y + +++ ED+++++D ++H+LC
Sbjct: 675 RLRQAANHPLLRRSEYTDQKLDKIAKMLCLREKAYADKKWQHVSEDLAWLSDIKIHQLCE 734
Query: 854 KFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLN 913
+F KF L + SGK EQL +L + I + +KVL+FS FT +LDILE L+
Sbjct: 735 RFRCTSKFLLNEQLALKSGKCEQLDVMLPE-IQKKGDKVLIFSQFTSMLDILEVYLNIRG 793
Query: 914 IKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPH 973
+ RLDGQT V DRQ +I+ F + VFLLST+AGG GINL AN++II D FNP+
Sbjct: 794 YSYKRLDGQTPVLDRQEMINEFNLSKDLFVFLLSTRAGGLGINLTSANHIIIHDIDFNPY 853
Query: 974 DDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHIS 1021
+D+QA DR HR+GQ K V VT L+S+ T+E +L LAK KL L+ ++
Sbjct: 854 NDKQAEDRCHRMGQEKPVHVTRLVSKGTVEVGMLALAKKKLQLEKQVT 901
>7297570 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 844
Score = 402 bits (1032), Expect = e-111
Identities = 229/539 (42%), Positives = 330/539 (60%), Gaps = 12/539 (2%)
Query: 489 IRQKPKLLSSDVELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTH 548
I ++PKLLSS ++L DYQ G+NWL ++++ +++ ILADEMGLGKT QVI+FLAYLK+
Sbjct: 276 IVEQPKLLSSGLQLADYQIIGLNWLTVMHKQEMNGILADEMGLGKTIQVIAFLAYLKENG 335
Query: 549 -HNGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRD-ILEENEGQYDVIV 606
HL+VVPSSTL+NW E +++CP L VE Y+GSQ ER +R ++ +DV++
Sbjct: 336 LSQAAHLIVVPSSTLDNWEAEISRWCPELVVEKYHGSQDERRRMRGRFAKDGFTGFDVLL 395
Query: 607 TTYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQ 666
TTY++ T + R D V++DE HMLKN ++R+ L+ INA R+LLTGTPLQ
Sbjct: 396 TTYHIVGSTPEERKMFRVCKLDYVIFDEAHMLKNMTTQRYANLITINARMRILLTGTPLQ 455
Query: 667 NNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKP 726
NNL EL+SLL F+MP F +D+ ++F +K + SD D+ E I+RAK +MKP
Sbjct: 456 NNLLELISLLCFVMPKFFAKSIEDIKSLFAKKGK-SDGDQDEVSQFQETQIQRAKRIMKP 514
Query: 727 FILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRN 786
F+LRR K VLK+LP+K + + M+ QK Y + + ++ ++ +S
Sbjct: 515 FVLRRLKKDVLKNLPKKLSLVEKVPMSSQQKIYYHELVDYYSNNKGEVCS------SSER 568
Query: 787 VSKNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDF 846
++M +R+ + HPLL RH + D + + N +YI E+++ M+DF
Sbjct: 569 AGIAIMMEMRRIANHPLLMRHYFTDANLRGFSKRLANASSFKKT-NEQYIFEELAVMSDF 627
Query: 847 ELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILE 906
+++++ K Y K+ + +SGK L ++L K+ H +VL+FS FT +LDI+E
Sbjct: 628 QVYQMMNKH-EFYDVKIPDNLICDSGKFLYLDTLLPKLKAEGH-RVLLFSQFTMMLDIVE 685
Query: 907 FVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKAGGFGINLVCANNVIIF 966
L F RLDG T VN RQ LI F DD+I VFLLSTKAGG GINL A+ +I
Sbjct: 686 EYLRIRKFGFCRLDGATAVNVRQDLITDFNGDDSIFVFLLSTKAGGVGINLTAADTCVIH 745
Query: 967 DQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQEDK 1025
D FNP++D+QA DR HR+GQ + V + LIS TIEE IL A+ KL L+ I+ +K
Sbjct: 746 DIDFNPYNDKQAEDRCHRMGQQRPVTIYRLISESTIEEGILMAAEEKLKLEKDITSNEK 804
>At2g02090 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 763
Score = 310 bits (795), Expect = 6e-84
Identities = 203/539 (37%), Positives = 299/539 (54%), Gaps = 36/539 (6%)
Query: 502 LKDYQQTGINWLHLLYQNDLS-CILADEMGLGKTCQVISFLAYLKQTHHN-GPHLVVVPS 559
LK YQ G+N+L LLY+ + ILADEMGLGKT Q I++L L + +++ GPHLVV P+
Sbjct: 213 LKPYQLVGVNFLLLLYKKGIEGAILADEMGLGKTIQAITYLTLLSRLNNDPGPHLVVCPA 272
Query: 560 STLENWLREFNKFCPHLKVEPYYGSQQER--AELRDILEENEGQ-YDVIVTTYNL----A 612
S LENW RE K+CP V Y+G+ + EL + + + ++V++ Y+L +
Sbjct: 273 SVLENWERELRKWCPSFTVLQYHGAARAAYSRELNSLSKAGKPPPFNVLLVCYSLFERHS 332
Query: 613 AGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKI--NAHFRLLLTGTPLQNNLK 670
K D L+ + V+ DE H LK+ S R+ LM + NA+ RL+LTGTPLQN+L
Sbjct: 333 EQQKDDRKVLKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 392
Query: 671 ELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILR 730
EL SLLEF++P++F ++ DL K+ D + I R K+++ PFILR
Sbjct: 393 ELWSLLEFMLPDIFTTENVDL----KKLLNAEDTE----------LITRMKSILGPFILR 438
Query: 731 RKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQ--VMEHRRKIKEGVK----MEKA- 783
R K V++ L K + + M Q+ Y++ I++ R +K K + KA
Sbjct: 439 RLKSDVMQQLVPKIQRVEYVLMERKQEDAYKEAIEEYRAASQARLVKLSSKSLNSLAKAL 498
Query: 784 -SRNVSKNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSY 842
R +S N RK + HPLL R IY+D + +++ + E++
Sbjct: 499 PKRQIS-NYFTQFRKIANHPLLIRRIYSDEDVIRIARKLHPIGAFGFECSLDRVIEEVKG 557
Query: 843 MTDFELHKLCCKFP-SLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQV 901
DF +H+L ++ + K L M S K L +L + H +VL+FS +T +
Sbjct: 558 FNDFRIHQLLFQYGVNDTKGTLSDKHVMLSAKCRTLAELLPSMKKSGH-RVLIFSQWTSM 616
Query: 902 LDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKAGGFGINLVCAN 961
LDILE+ L + + + RLDG TQV DRQ+++D F D +I LLST+AGG G+NL A+
Sbjct: 617 LDILEWTLDVIGVTYRRLDGSTQVTDRQTIVDTFNNDKSIFACLLSTRAGGQGLNLTGAD 676
Query: 962 NVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHI 1020
VII D FNP DRQA DR HR+GQTK V + L+++ T++E I +AK KL LD +
Sbjct: 677 TVIIHDMDFNPQIDRQAEDRCHRIGQTKPVTIFRLVTKSTVDENIYEIAKRKLVLDAAV 735
>At5g19310 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1041
Score = 297 bits (761), Expect = 5e-80
Identities = 204/563 (36%), Positives = 304/563 (53%), Gaps = 78/563 (13%)
Query: 489 IRQKPKLLSSDVELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTH 548
+ ++P LL EL+ YQ G+ W+ LY ND + ILADEMGLGKT Q I+ +AYL ++
Sbjct: 351 VTKQPSLLQGG-ELRSYQLEGLQWMVSLYNNDYNGILADEMGLGKTIQTIALIAYLLESK 409
Query: 549 H-NGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQYDVIVT 607
+GPHL++ P + L NW EF + P + Y GS+++R E+R + G+++V++T
Sbjct: 410 DLHGPHLILAPKAVLPNWENEFALWAPSISAFLYDGSKEKRTEIRARIA--GGKFNVLIT 467
Query: 608 TYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKN---SMSERFNKLMKINAHFRLLLTGTP 664
Y+L D +FL+ +++ ++ DEGH LKN ++++ +I RLLLTGTP
Sbjct: 468 HYDL---IMRDKAFLKKIDWNYMIVDEGHRLKNHECALAKTLGTGYRIKR--RLLLTGTP 522
Query: 665 LQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEH---AIERAK 721
+QN+L+EL SLL F++P++F S + F++ T A+ G L E I R
Sbjct: 523 IQNSLQELWSLLNFLLPHIFNSIHN-----FEEWFNTPFAECGSASLTDEEELLIINRLH 577
Query: 722 TMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKME 781
+++PF+LRRKK +V K LP K IL C+M+ QK Y KQV + R G+
Sbjct: 578 HVIRPFLLRRKKSEVEKFLPGKTQVILKCDMSAWQKLYY----KQVTDVGR---VGLHSG 630
Query: 782 KASRNVSKNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMS 841
+NL M LRK HP LF
Sbjct: 631 NGKSKSLQNLTMQLRKCCNHPYLF------------------------------------ 654
Query: 842 YMTDFELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQV 901
D+ + CK P + + SGK E L +L K+ H ++L+FS T++
Sbjct: 655 VGADYNM----CKKPEIVR---------ASGKFELLDRLLPKLKKAGH-RILLFSQMTRL 700
Query: 902 LDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDT-IPVFLLSTKAGGFGINLVCA 960
+D+LE LS + +LRLDG T+ + R L+ +F E D+ +FLLST+AGG G+NL A
Sbjct: 701 IDLLEIYLSLNDYMYLRLDGSTKTDQRGILLKQFNEPDSPYFMFLLSTRAGGLGLNLQTA 760
Query: 961 NNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHI 1020
+ +IIFD +NP D+QA DRAHR+GQ KEV+V L+S +IEE IL AK K+ +D +
Sbjct: 761 DTIIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSIGSIEEVILERAKQKMGIDAKV 820
Query: 1021 SQEDKKNEEALENKVTDLLEDII 1043
Q N + ++LE+I+
Sbjct: 821 IQAGLFNTTSTAQDRREMLEEIM 843
>YOR290c [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1703
Score = 297 bits (760), Expect = 7e-80
Identities = 203/569 (35%), Positives = 296/569 (51%), Gaps = 69/569 (12%)
Query: 489 IRQKPKLLSSDVELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTH 548
I+++P +L LKDYQ G+ W+ L+ N L+ ILADEMGLGKT Q IS L YL +
Sbjct: 755 IKKQPSILVGGT-LKDYQIKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEMK 813
Query: 549 H-NGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQYDVIVT 607
+ GP+LV+VP STL NW EF K+ P L+ + GS ER + + G++DV++T
Sbjct: 814 NIRGPYLVIVPLSTLSNWSSEFAKWAPTLRTISFKGSPNERKAKQ--AKIRAGEFDVVLT 871
Query: 608 TYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKL-MKINAHFRLLLTGTPLQ 666
T+ + + L + ++ DEGH +KN+ S+ L +A +RL+LTGTPLQ
Sbjct: 872 TFEYIIKER---ALLSKVKWVHMIIDEGHRMKNAQSKLSLTLNTHYHADYRLILTGTPLQ 928
Query: 667 NNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPL--LAEH----AIERA 720
NNL EL +LL F++P +F S K F + T A+ G L+E I R
Sbjct: 929 NNLPELWALLNFVLPKIFNSVKS-----FDEWFNTPFANTGGQDKIELSEEETLLVIRRL 983
Query: 721 KTMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKM 780
+++PF+LRR K V K LP K ++ C+M+ LQ+ +YQQ +K R I +
Sbjct: 984 HKVLRPFLLRRLKKDVEKELPDKVEKVVKCKMSALQQIMYQQMLKY---RRLFIGDQNNK 1040
Query: 781 EKASRNVSKNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDM 840
+ N IM L+K HP +F + ED
Sbjct: 1041 KMVGLRGFNNQIMQLKKICNHPFVFEEV-----------------------------EDQ 1071
Query: 841 SYMTDFELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQ 900
T + D W +GK E L +L K+ H +VL+F TQ
Sbjct: 1072 INPTR----------------ETNDDIWRVAGKFELLDRILPKLKATGH-RVLIFFQMTQ 1114
Query: 901 VLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDT-IPVFLLSTKAGGFGINLVC 959
++DI+E L +NIK+LRLDG T+ ++R L+ F D+ F+LST+AGG G+NL
Sbjct: 1115 IMDIMEDFLRYINIKYLRLDGHTKSDERSELLRLFNAPDSEYLCFILSTRAGGLGLNLQT 1174
Query: 960 ANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTH 1019
A+ VIIFD +NPH D QA DRAHR+GQ EV++ LI+ +++EE IL A KL +D
Sbjct: 1175 ADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTNSVEEVILERAYKKLDIDGK 1234
Query: 1020 ISQEDKKNEEALENKVTDLLEDIIFDENQ 1048
+ Q K + ++ + LL ++ E +
Sbjct: 1235 VIQAGKFDNKSTSEEQEALLRSLLDAEEE 1263
>At3g06010 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1132
Score = 296 bits (759), Expect = 9e-80
Identities = 204/561 (36%), Positives = 299/561 (52%), Gaps = 73/561 (13%)
Query: 489 IRQKPKLLSSDVELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTH 548
+ ++P LL EL+ YQ G+ W+ L+ N+L+ ILADEMGLGKT Q IS +AYL +
Sbjct: 421 VTEQPSLLEGG-ELRSYQLEGLQWMVSLFNNNLNGILADEMGLGKTIQTISLIAYLLENK 479
Query: 549 H-NGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQYDVIVT 607
GP+L+V P + L NW+ EF + P + Y G +ER +R+ + EG+++V++T
Sbjct: 480 GVPGPYLIVAPKAVLPNWVNEFATWVPSIAAFLYDGRLEERKAIREKI-AGEGKFNVLIT 538
Query: 608 TYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMK-INAHFRLLLTGTPLQ 666
Y+L D +FL+ + ++ DEGH LKN S L+ RLLLTGTP+Q
Sbjct: 539 HYDL---IMRDKAFLKKIEWYYMIVDEGHRLKNHESALAKTLLTGYRIKRRLLLTGTPIQ 595
Query: 667 NNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEH---AIERAKTM 723
N+L+EL SLL F++P++F S ++ F++ AD+G L E I R +
Sbjct: 596 NSLQELWSLLNFLLPHIFNSVQN-----FEEWFNAPFADRGNVSLTDEEELLIIHRLHHV 650
Query: 724 MKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKA 783
++PFILRRKKD+V K LP K IL C+M+ QK Y KQV + R G++
Sbjct: 651 IRPFILRRKKDEVEKFLPGKTQVILKCDMSAWQKVYY----KQVTDMGR---VGLQTGSG 703
Query: 784 SRNVSKNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYM 843
+NL M LRK HP LF + D +
Sbjct: 704 KSKSLQNLTMQLRKCCNHPYLF------------------------------VGGDYNMW 733
Query: 844 TDFELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLD 903
E+ + KF E L +L K+ H ++L+FS T+++D
Sbjct: 734 KKPEIVRASGKF-------------------ELLDRLLPKLRKAGH-RILLFSQMTRLID 773
Query: 904 ILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDT-IPVFLLSTKAGGFGINLVCANN 962
+LE L+ + K+LRLDG T+ + R L+ +F E D+ +FLLST+AGG G+NL A+
Sbjct: 774 VLEIYLTLNDYKYLRLDGTTKTDQRGLLLKQFNEPDSPYFMFLLSTRAGGLGLNLQTADT 833
Query: 963 VIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQ 1022
VIIFD +NP D+QA DRAHR+GQ KEV+V L+S ++EE IL AK K+ +D + Q
Sbjct: 834 VIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSVEEVILERAKQKMGIDAKVIQ 893
Query: 1023 EDKKNEEALENKVTDLLEDII 1043
N + ++LE+I+
Sbjct: 894 AGLFNTTSTAQDRREMLEEIM 914
>7303422 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1027
Score = 295 bits (756), Expect = 2e-79
Identities = 211/554 (38%), Positives = 294/554 (52%), Gaps = 78/554 (14%)
Query: 501 ELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQ-THHNGPHLVVVPS 559
E++DYQ G+NW+ LY+N ++ ILADEMGLGKT Q IS L YLK + GPH+V+VP
Sbjct: 127 EMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIVPK 186
Query: 560 STLENWLREFNKFCPHLKVEPYYGSQQER-AELRDILEENEGQYDVIVTTYNLAAGTKYD 618
STL+NW+ EF K+CP L+ G Q R +RD+L G++DV VT+Y + K
Sbjct: 187 STLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDVL--MPGEWDVCVTSYEMCIREK-- 242
Query: 619 VSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEF 678
S + N+ +V DE H +KN S+ L + RLL+TGTPLQNNL EL +LL F
Sbjct: 243 -SVFKKFNWRYLVIDEAHRIKNEKSKLSEILREFKTANRLLITGTPLQNNLHELWALLNF 301
Query: 679 IMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHA-IERAKTMMKPFILRRKKDQVL 737
++P++F S +D F + T N L + A I R ++KPF+LRR K +V
Sbjct: 302 LLPDVFNSSED-----FDEWFNT-------NTCLGDDALITRLHAVLKPFLLRRLKAEVE 349
Query: 738 KHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSKNLIMALRK 797
K L K + ++++Q+ Y K +++ + K+EK +N++M LRK
Sbjct: 350 KRLKPKKEMKIFVGLSKMQRDWY---TKVLLKDIDVVNGAGKVEKMR---LQNILMQLRK 403
Query: 798 ASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFELHKLCCKFPS 857
+ HP LF EP Y TD L
Sbjct: 404 CTNHPYLF---------------DGAEP-------------GPPYTTDTHL--------- 426
Query: 858 LYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFL 917
+Y NSGK+ L +L K+ + Q +VL+FS T++LDILE N +
Sbjct: 427 VY----------NSGKMAILDKLLPKLQE-QGSRVLIFSQMTRMLDILEDYCHWRNYNYC 475
Query: 918 RLDGQTQVNDRQSLIDRFYEDDTIP-VFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDR 976
RLDGQT DR I F D++ +F+LST+AGG GINL A+ VII+D +NP D
Sbjct: 476 RLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQMDL 535
Query: 977 QAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQEDK--KNEEALENK 1034
QA DRAHR+GQ K+V+V LI+ T+EEKI+ A+ KL LD + Q + N NK
Sbjct: 536 QAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGRLVDNRSNQLNK 595
Query: 1035 VTDLLEDIIFDENQ 1048
++L I F NQ
Sbjct: 596 -DEMLNIIRFGANQ 608
>SPAC1250.01 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1199
Score = 295 bits (754), Expect = 3e-79
Identities = 199/580 (34%), Positives = 296/580 (50%), Gaps = 64/580 (11%)
Query: 474 KKTSITQLRNNQMKFIRQKPKLLSSDVELKDYQQTGINWLHLLYQNDLSCILADEMGLGK 533
+K + +N + + ++P +L +LK+YQ G+ W+ LY N L+ ILADEMGLGK
Sbjct: 390 RKIDYYNVAHNIREVVTEQPSILVGG-KLKEYQLRGLQWMISLYNNHLNGILADEMGLGK 448
Query: 534 TCQVISFLAYL-KQTHHNGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELR 592
T Q IS + +L ++ NGP LV+VP STL NW EF ++ P + Y G Q R L
Sbjct: 449 TIQTISLITHLIEKKRQNGPFLVIVPLSTLTNWTMEFERWAPSIVKIVYKGPPQVRKALH 508
Query: 593 DILEENEGQYDVIVTTYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMK- 651
+ + V++TTY D L + ++ DEGH +KN+ S+ N L
Sbjct: 509 P--QVRHSNFQVLLTTYEYII---KDRPLLSRIKWIYMIIDEGHRMKNTQSKLTNTLTTY 563
Query: 652 INAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPL 711
++ +RL+LTGTPLQNNL EL +LL F++P +F S K T DK L
Sbjct: 564 YSSRYRLILTGTPLQNNLPELWALLNFVLPRIFNSIKSFDEWFNTPFANTGGQDK--MEL 621
Query: 712 LAEHA---IERAKTMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVM 768
E + I R +++PF+LRR K V LP K ++ C+M+ LQ+ LY Q+
Sbjct: 622 TEEESLLVIRRLHKVLRPFLLRRLKKDVEAELPDKVEKVIRCQMSGLQQKLYY----QMK 677
Query: 769 EHRRKIKEGVKMEKASRNVSKNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYY 828
+H E K K +N +M L+K HP +F
Sbjct: 678 KHGMLYVEDAKRGKTGIKGLQNTVMQLKKICNHPFVF----------------------- 714
Query: 829 ENGNIEYIKEDMSYMTDFELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQ 888
ED+ D P+ + + + W SGK E L +L K+
Sbjct: 715 ---------EDVERSID----------PTGFNYDML---WRVSGKFELLDRILPKLFRSG 752
Query: 889 HEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDT-IPVFLLS 947
H ++L+F TQ+++I+E L ++LRLDG T+ +DR L+ F + + +FLLS
Sbjct: 753 H-RILMFFQMTQIMNIMEDYLHYRQWRYLRLDGSTKADDRSKLLGVFNDPTAEVNLFLLS 811
Query: 948 TKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKIL 1007
T+AGG G+NL A+ VIIFD +NPH D QA DRAHR+GQTKEV++ LI+ ++EE IL
Sbjct: 812 TRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRIYRLITEKSVEENIL 871
Query: 1008 HLAKNKLALDTHISQEDKKNEEALENKVTDLLEDIIFDEN 1047
A+ KL +D + Q K + ++ + L ++ +EN
Sbjct: 872 ARAQYKLDIDGKVIQAGKFDNKSTPEEREAFLRSLLENEN 911
>Hs21071050 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1568
Score = 292 bits (748), Expect = 2e-78
Identities = 197/572 (34%), Positives = 301/572 (52%), Gaps = 72/572 (12%)
Query: 491 QKPKLLSSDVELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHH- 549
+K L + LK YQ G+ W+ LY N+L+ ILADEMGLGKT Q I+ + YL +
Sbjct: 709 EKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRL 768
Query: 550 NGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQYDVIVTTY 609
NGP+L++VP STL NW EF+K+ P + Y G+ R L + + G+++V++TTY
Sbjct: 769 NGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSL--VPQLRSGKFNVLLTTY 826
Query: 610 NLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHF----RLLLTGTPL 665
K+ ++ +R + ++ DEGH +KN +N H+ R+LLTGTPL
Sbjct: 827 EYIIKDKHILAKIR---WKYMIVDEGHRMKN---HHCKLTQVLNTHYVAPRRILLTGTPL 880
Query: 666 QNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEH----AIERAK 721
QN L EL +LL F++P +F S + F+Q A G L E I R
Sbjct: 881 QNKLPELWALLNFLLPTIFKS-----CSTFEQWFNAPFAMTGERVDLNEEETILIIRRLH 935
Query: 722 TMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQ-QEIKQVMEHRRKIKEGVKM 780
+++PF+LRR K +V LP K +++ C+M+ LQK LY+ + K ++ + +G +
Sbjct: 936 KVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGIL-----LTDGSEK 990
Query: 781 EKASRNVSK---NLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIK 837
+K + +K N IM LRK HP +F+HI E E++
Sbjct: 991 DKKGKGGAKTLMNTIMQLRKICNHPYMFQHI--------------------EESFAEHLG 1030
Query: 838 EDMSYMTDFELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSL 897
+ EL++ SGK E L +L K+ H +VL+F
Sbjct: 1031 YSNGVINGAELYRA-------------------SGKFELLDRILPKLRATNH-RVLLFCQ 1070
Query: 898 FTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDT-IPVFLLSTKAGGFGIN 956
T ++ I+E + N +LRLDG T+ DR +L+ +F E + +FLLST+AGG G+N
Sbjct: 1071 MTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLN 1130
Query: 957 LVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLAL 1016
L A+ V+IFD +NPH D QA DRAHR+GQ EV+V L + +++EEKIL AK KL +
Sbjct: 1131 LQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNV 1190
Query: 1017 DTHISQEDKKNEEALENKVTDLLEDIIFDENQ 1048
D + Q ++++ ++ L+ I+ E +
Sbjct: 1191 DQKVIQAGMFDQKSSSHERRAFLQAILEHEEE 1222
>Hs21071048 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1586
Score = 292 bits (748), Expect = 2e-78
Identities = 197/572 (34%), Positives = 301/572 (52%), Gaps = 72/572 (12%)
Query: 491 QKPKLLSSDVELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHH- 549
+K L + LK YQ G+ W+ LY N+L+ ILADEMGLGKT Q I+ + YL +
Sbjct: 709 EKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRL 768
Query: 550 NGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQYDVIVTTY 609
NGP+L++VP STL NW EF+K+ P + Y G+ R L + + G+++V++TTY
Sbjct: 769 NGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSL--VPQLRSGKFNVLLTTY 826
Query: 610 NLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHF----RLLLTGTPL 665
K+ ++ +R + ++ DEGH +KN +N H+ R+LLTGTPL
Sbjct: 827 EYIIKDKHILAKIR---WKYMIVDEGHRMKN---HHCKLTQVLNTHYVAPRRILLTGTPL 880
Query: 666 QNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEH----AIERAK 721
QN L EL +LL F++P +F S + F+Q A G L E I R
Sbjct: 881 QNKLPELWALLNFLLPTIFKS-----CSTFEQWFNAPFAMTGERVDLNEEETILIIRRLH 935
Query: 722 TMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQ-QEIKQVMEHRRKIKEGVKM 780
+++PF+LRR K +V LP K +++ C+M+ LQK LY+ + K ++ + +G +
Sbjct: 936 KVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGIL-----LTDGSEK 990
Query: 781 EKASRNVSK---NLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIK 837
+K + +K N IM LRK HP +F+HI E E++
Sbjct: 991 DKKGKGGAKTLMNTIMQLRKICNHPYMFQHI--------------------EESFAEHLG 1030
Query: 838 EDMSYMTDFELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSL 897
+ EL++ SGK E L +L K+ H +VL+F
Sbjct: 1031 YSNGVINGAELYRA-------------------SGKFELLDRILPKLRATNH-RVLLFCQ 1070
Query: 898 FTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDT-IPVFLLSTKAGGFGIN 956
T ++ I+E + N +LRLDG T+ DR +L+ +F E + +FLLST+AGG G+N
Sbjct: 1071 MTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLN 1130
Query: 957 LVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLAL 1016
L A+ V+IFD +NPH D QA DRAHR+GQ EV+V L + +++EEKIL AK KL +
Sbjct: 1131 LQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNV 1190
Query: 1017 DTHISQEDKKNEEALENKVTDLLEDIIFDENQ 1048
D + Q ++++ ++ L+ I+ E +
Sbjct: 1191 DQKVIQAGMFDQKSSSHERRAFLQAILEHEEE 1222
>Hs21071058 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1052
Score = 292 bits (747), Expect = 2e-78
Identities = 201/538 (37%), Positives = 292/538 (53%), Gaps = 74/538 (13%)
Query: 501 ELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHH-NGPHLVVVPS 559
+L+DYQ G+NWL LY+N ++ ILADEMGLGKT Q IS L Y+K + GPH+V+VP
Sbjct: 179 KLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPK 238
Query: 560 STLENWLREFNKFCPHLKVEPYYGSQQERAE-LRDILEENEGQYDVIVTTYNLAAGTKYD 618
STL NW+ EF ++ P L+ G +++RA +RD+L G++DV VT+Y + K
Sbjct: 239 STLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVL--LPGEWDVCVTSYEMLIKEK-- 294
Query: 619 VSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEF 678
S + N+ +V DE H +KN S+ + + RLLLTGTPLQNNL EL SLL F
Sbjct: 295 -SVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNF 353
Query: 679 IMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQVLK 738
++P++F + DD + F D + +ER +++PF+LRR K V K
Sbjct: 354 LLPDVF-NSADDFDSWFDTNNCLGD----------QKLVERLHMVLRPFLLRRIKADVEK 402
Query: 739 HLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSKNLIMALRKA 798
LP K ++ ++++Q+ Y + +M+ + KM+K N++M LRK
Sbjct: 403 SLPPKKEVKIYVGLSKMQREWY---TRILMKDIDILNSAGKMDKMR---LLNILMQLRKC 456
Query: 799 SIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFELHKLCCKFPSL 858
HP LF EP Y TD L
Sbjct: 457 CNHPYLF---------------DGAEP-------------GPPYTTDMHL---------- 478
Query: 859 YKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLR 918
NSGK+ L +L K+ + Q +VL+FS T+VLDILE N ++ R
Sbjct: 479 ---------VTNSGKMVVLDKLLPKLKE-QGSRVLIFSQMTRVLDILEDYCMWRNYEYCR 528
Query: 919 LDGQTQVNDRQSLIDRFYE-DDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQ 977
LDGQT ++RQ I+ + E + T VF+LST+AGG GINL A+ VI++D +NP D Q
Sbjct: 529 LDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQ 588
Query: 978 AADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQEDKKNEEALENKV 1035
A DRAHR+GQTK V+V I+ +T+EE+I+ A+ KL LD+ + Q+ + ++ L NK+
Sbjct: 589 AMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNL-NKI 645
>YIL126w [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1359
Score = 290 bits (743), Expect = 6e-78
Identities = 210/597 (35%), Positives = 306/597 (51%), Gaps = 82/597 (13%)
Query: 466 KPRARTKQKKTSITQLRNNQMKFIRQKPKLLSSDVELKDYQQTGINWLHLLYQNDLSCIL 525
+P +++KT ++ + + I ++P +L LK+YQ G+ W+ LY N L+ IL
Sbjct: 435 QPITDEEREKTDYYEVAHRIKEKIDKQPSILVGGT-LKEYQLRGLEWMVSLYNNHLNGIL 493
Query: 526 ADEMGLGKTCQVISFLAYLKQTHHN-GPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGS 584
ADEMGLGKT Q IS + YL + + GP LV+VP ST+ NW EF K+ P L Y G+
Sbjct: 494 ADEMGLGKTIQSISLITYLYEVKKDIGPFLVIVPLSTITNWTLEFEKWAPSLNTIIYKGT 553
Query: 585 QQERAELRDILEENEGQYDVIVTTYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSE 644
+R L+ + G +DV++TTY D S L ++ ++ DEGH +KN+ S
Sbjct: 554 PNQRHSLQH--QIRVGNFDVLLTTYEYII---KDKSLLSKHDWAHMIIDEGHRMKNAQS- 607
Query: 645 RFNKLMKINAHF-----RLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKT 699
KL +H+ RL+LTGTPLQNNL EL +LL F++P +F S K F+
Sbjct: 608 ---KLSFTISHYYRTRNRLILTGTPLQNNLPELWALLNFVLPKIFNSAK-----TFEDWF 659
Query: 700 RTSDADKGYN---PLLAEHA---IERAKTMMKPFILRRKKDQVLKHLPRKHNHILHCEMT 753
T A+ G L E I R +++PF+LRR K +V K LP K ++ C+++
Sbjct: 660 NTPFANTGTQEKLELTEEETLLIIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVIKCKLS 719
Query: 754 ELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSK---NLIMALRKASIHPLLFRHIYN 810
LQ+ LYQQ +K + G E A++ K N IM LRK HP +F +
Sbjct: 720 GLQQQLYQQMLK-----HNALFVGAGTEGATKGGIKGLNNKIMQLRKICNHPFVFDEV-- 772
Query: 811 DXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFELHKLCCKFPSLYKFKLQSDEWMN 870
P GN + + F++
Sbjct: 773 ---------EGVVNP---SRGNSDLL------------------------FRV------- 789
Query: 871 SGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQS 930
+GK E L VL K H +VL+F TQV+DI+E L ++K++RLDG T+ +R
Sbjct: 790 AGKFELLDRVLPKFKASGH-RVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTE 848
Query: 931 LIDRFYEDDT-IPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTK 989
+++ F D+ FLLST+AGG G+NL A+ VIIFD +NPH D QA DRAHR+GQ
Sbjct: 849 MLNAFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKN 908
Query: 990 EVQVTTLISRDTIEEKILHLAKNKLALDTHISQEDKKNEEALENKVTDLLEDIIFDE 1046
EV++ LI+ D++EE IL A KL +D + Q K + ++ + L +I E
Sbjct: 909 EVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKSTAEEQEAFLRRLIESE 965
>Hs21071056 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1647
Score = 290 bits (742), Expect = 8e-78
Identities = 199/561 (35%), Positives = 293/561 (51%), Gaps = 72/561 (12%)
Query: 502 LKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHH-NGPHLVVVPSS 560
LK YQ G+ WL LY N+L+ ILADEMGLGKT Q I+ + YL + NGP L++VP S
Sbjct: 754 LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLS 813
Query: 561 TLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQYDVIVTTYNLAAGTKYDVS 620
TL NW EF+K+ P + Y GS R + + G+++V++TTY K+ ++
Sbjct: 814 TLSNWAYEFDKWAPSVVKVSYKGSPAARRAF--VPQLRSGKFNVLLTTYEYIIKDKHILA 871
Query: 621 FLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHF----RLLLTGTPLQNNLKELMSLL 676
+R + ++ DEGH +KN +N H+ RLLLTGTPLQN L EL +LL
Sbjct: 872 KIR---WKYMIVDEGHRMKN---HHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALL 925
Query: 677 EFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEH----AIERAKTMMKPFILRRK 732
F++P +F S + F+Q A G L E I R +++PF+LRR
Sbjct: 926 NFLLPTIFKS-----CSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRL 980
Query: 733 KDQVLKHLPRKHNHILHCEMTELQKTLYQ-QEIKQVMEHRRKIKEGVKMEKASRNVSK-- 789
K +V LP K +++ C+M+ LQ+ LY+ + K V+ + +G + +K + +K
Sbjct: 981 KKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVL-----LTDGSEKDKKGKGGTKTL 1035
Query: 790 -NLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFEL 848
N IM LRK HP +F+HI E E++ + +L
Sbjct: 1036 MNTIMQLRKICNHPYMFQHI--------------------EESFSEHLGFTGGIVQGLDL 1075
Query: 849 HKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFV 908
++ SGK E L +L K+ H KVL+F T ++ I+E
Sbjct: 1076 YRA-------------------SGKFELLDRILPKLRATNH-KVLLFCQMTSLMTIMEDY 1115
Query: 909 LSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDT-IPVFLLSTKAGGFGINLVCANNVIIFD 967
+ K+LRLDG T+ DR L+ F E + +FLLST+AGG G+NL A+ VIIFD
Sbjct: 1116 FAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFD 1175
Query: 968 QSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQEDKKN 1027
+NPH D QA DRAHR+GQ EV+V L + +++EEKIL AK KL +D + Q +
Sbjct: 1176 SDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFD 1235
Query: 1028 EEALENKVTDLLEDIIFDENQ 1048
+++ ++ L+ I+ E Q
Sbjct: 1236 QKSSSHERRAFLQAILEHEEQ 1256
>7294205 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1638
Score = 287 bits (735), Expect = 5e-77
Identities = 201/561 (35%), Positives = 294/561 (51%), Gaps = 72/561 (12%)
Query: 502 LKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHH-NGPHLVVVPSS 560
LK+YQ G+ WL LY N+L+ ILADEMGLGKT Q IS + YL GP+L++VP S
Sbjct: 773 LKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTISLVTYLMDRKKVMGPYLIIVPLS 832
Query: 561 TLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQYDVIVTTYNLAAGTKYDVS 620
TL NW+ EF K+ P + V Y GS Q R L++ + +++V++TTY D +
Sbjct: 833 TLPNWVLEFEKWAPAVGVVSYKGSPQGRRLLQNQMRAT--KFNVLLTTYEYVI---KDKA 887
Query: 621 FLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAH----FRLLLTGTPLQNNLKELMSLL 676
L + ++ DEGH +KN +N H +RLLLTGTPLQN L EL +LL
Sbjct: 888 VLAKIQWKYMIIDEGHRMKN---HHCKLTQVLNTHYIAPYRLLLTGTPLQNKLPELWALL 944
Query: 677 EFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEH----AIERAKTMMKPFILRRK 732
F++P++F S + F+Q A G L E I R +++PF+LRR
Sbjct: 945 NFLLPSIFKS-----CSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRL 999
Query: 733 KDQVLKHLPRKHNHILHCEMTELQKTLYQ-QEIKQVM--EHRRKIKEGVKMEKASRNVSK 789
K +V LP K +I+ C+M+ LQ+ LY+ + K V+ + K K G K
Sbjct: 1000 KKEVEHQLPDKVEYIIKCDMSALQRVLYKHMQSKGVLLTDGSEKGKHG----KGGAKALM 1055
Query: 790 NLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFELH 849
N I+ LRK HP +F+HI E +Y ++ +
Sbjct: 1056 NTIVQLRKLCNHPFMFQHI---------------EEKYCDHTGGHGVVSG---------- 1090
Query: 850 KLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVL 909
P LY+ SGK E L +L K+ H +VL+F TQ + I+E L
Sbjct: 1091 ------PDLYRV---------SGKFELLDRILPKLKATNH-RVLLFCQMTQCMTIIEDYL 1134
Query: 910 STLNIKFLRLDGQTQVNDRQSLIDRF-YEDDTIPVFLLSTKAGGFGINLVCANNVIIFDQ 968
+LRLDG T+ DR L+ +F + + VFLLST+AGG G+NL A+ V+IFD
Sbjct: 1135 GWRQFGYLRLDGTTKAEDRGELLRKFNAKGSDVFVFLLSTRAGGLGLNLQTADTVVIFDS 1194
Query: 969 SFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQEDKKNE 1028
+NPH D QA DRAHR+GQ EV+V L++ +++EE+IL A+ KL +D + Q ++
Sbjct: 1195 DWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQ 1254
Query: 1029 EALENKVTDLLEDIIF-DENQ 1048
++ ++ L+ I+ D+N+
Sbjct: 1255 KSTGSERQQFLQTILHQDDNE 1275
>YBR245c [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1129
Score = 286 bits (732), Expect = 1e-76
Identities = 192/548 (35%), Positives = 289/548 (52%), Gaps = 72/548 (13%)
Query: 490 RQKPKLLSSDVELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHH 549
R+ P ++ +L+ YQ G+NWL L++N ++ ILADEMGLGKT Q ISFL YL+
Sbjct: 186 RESPAYVNG--QLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEK 243
Query: 550 -NGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEG-QYDVIVT 607
GP LV+ P STL NWLRE N++ P + G ++ERAEL I ++ G +DV++
Sbjct: 244 IPGPFLVIAPKSTLNNWLREINRWTPDVNAFILQGDKEERAEL--IQKKLLGCDFDVVIA 301
Query: 608 TYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQN 667
+Y + K S L+ N++ ++ DE H +KN S L + + RLL+TGTPLQN
Sbjct: 302 SYEIIIREK---SPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRNRLLITGTPLQN 358
Query: 668 NLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPF 727
NL EL +LL F++P++F S D F ++ D DK +++ T+++PF
Sbjct: 359 NLHELWALLNFLLPDIF-SDAQDFDDWFSSESTEEDQDK---------IVKQLHTVLQPF 408
Query: 728 ILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNV 787
+LRR K V L K L+ M+ +QK Y K+++E G K S+
Sbjct: 409 LLRRIKSDVETSLLPKKELNLYVGMSSMQKKWY----KKILEKDLDAVNGSNGSKESKTR 464
Query: 788 SKNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFE 847
N++M LRK HP LF P Y + ++ Y
Sbjct: 465 LLNIMMQLRKCCNHPYLF-------------DGAEPGPPYTTDEHLVY------------ 499
Query: 848 LHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEF 907
N+ K++ L +L K+ + + +VL+FS +++LDILE
Sbjct: 500 ----------------------NAAKLQVLDKLLKKLKE-EGSRVLIFSQMSRLLDILED 536
Query: 908 VLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIP-VFLLSTKAGGFGINLVCANNVIIF 966
N ++ R+DG T DR ID + D+ VFLL+T+AGG GINL A+ V+++
Sbjct: 537 YCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGLGINLTSADVVVLY 596
Query: 967 DQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQEDKK 1026
D +NP D QA DRAHR+GQ K+V+V L++ +++EEKIL A KL LD + Q+++
Sbjct: 597 DSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQLVIQQNRT 656
Query: 1027 NEEALENK 1034
+ + ENK
Sbjct: 657 SLKKKENK 664
>CE27114 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1336
Score = 286 bits (732), Expect = 1e-76
Identities = 190/561 (33%), Positives = 303/561 (53%), Gaps = 77/561 (13%)
Query: 500 VELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHH-NGPHLVVVP 558
++LK YQ G+ W+ L+ N+L+ ILADEMGLGKT Q I+F+ YL + +GP LV+VP
Sbjct: 364 LKLKPYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIAFITYLMEIKKTSGPFLVIVP 423
Query: 559 SSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQYDVIVTTYNLAAGTKYD 618
ST+ NW EF+K+ ++ + Y G ++ R I++ G+++V++TT+ K
Sbjct: 424 LSTVPNWQNEFDKWAANVHLIAYKGPKETRKVFEPIIK--SGKFNVLLTTFEYVIREK-- 479
Query: 619 VSFLRNRNFDVVVYDEGHMLKN---SMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSL 675
+ L + ++ DEGH LKN ++E N + RLL+TGTPLQN L EL +L
Sbjct: 480 -ALLGKLRWKYMIIDEGHRLKNQHCKLTEMLN--TRFQCQRRLLITGTPLQNKLPELWAL 536
Query: 676 LEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEH----AIERAKTMMKPFILRR 731
L F++P++F S + F+Q A G L + I R +++PF+LRR
Sbjct: 537 LNFLLPSIFSS-----CSTFEQWFNAPFATTGEKVELTQEETMLIIRRLHKVLRPFLLRR 591
Query: 732 KKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSK-- 789
K +V LP K ++ C+M+ LQK LY + +++G+ ++ + SK
Sbjct: 592 LKKEVESELPDKMEFVVRCDMSALQKVLY-----------KHMQKGLLLDGKTNTGSKSL 640
Query: 790 -NLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFEL 848
N ++ LRK HP LF ++ D +++ +L
Sbjct: 641 RNTMIHLRKLCNHPFLFENVEESCRNFW----------------------DARFISAVDL 678
Query: 849 HKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFV 908
+++ SGK+E L +L K+ H +VL+F T ++ I+E
Sbjct: 679 YRV-------------------SGKLELLSRILPKLQATGH-RVLMFFQMTSMMTIVEDF 718
Query: 909 LSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDT-IPVFLLSTKAGGFGINLVCANNVIIFD 967
L+ I++LRLDG T+ ++R +L+D+F ++ +F+LST+AGG G+NL A+ VIIFD
Sbjct: 719 LAGGTIQYLRLDGSTKPDERGALLDKFNAPNSEYFLFMLSTRAGGLGLNLQTADTVIIFD 778
Query: 968 QSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQEDKKN 1027
+NPH D QA DRAHR+GQ EV+V LI+ +++EEKIL A+ KL +D + Q K +
Sbjct: 779 SDWNPHQDMQAQDRAHRIGQKAEVRVFRLITANSVEEKILAAARYKLNVDEKVIQAGKFD 838
Query: 1028 EEALENKVTDLLEDIIFDENQ 1048
+ + ++LE+II EN+
Sbjct: 839 NRSTGAERREILENIIKTENE 859
>YFR038w [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 778
Score = 286 bits (731), Expect = 2e-76
Identities = 217/659 (32%), Positives = 331/659 (49%), Gaps = 37/659 (5%)
Query: 393 SKDTELNILDVDTYSDD--EANETITNDSANVQIIKSSTTSRENSLGPSKRKRNXXXXXX 450
S D EL+ +D T S + NE + II + R N + + K N
Sbjct: 113 SLDDELSEMDTKTVSLKLKKLNEFVRQSQVYSSIIADTLLHRSNEVANANTKDNSNSDDE 172
Query: 451 XXXXXXXXXXXXXXXKPRARTKQKKTSITQLRNNQMKFIRQKPKLLSSDVELKDYQQTGI 510
+ K+ + + TQ I+Q P+LL + + LK YQ G+
Sbjct: 173 EHSSKKRKTKKKSITDFFKKQKKNEDTTTQNGAPDDAAIKQ-PRLLKNCI-LKPYQLEGL 230
Query: 511 NWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHHNGPHLVVVPSSTLENWLREFN 570
NWL LY+N L+ ILADEMGLGKT Q I+ LA++ + GP LV P STL+NW+ EF
Sbjct: 231 NWLITLYENGLNGILADEMGLGKTVQSIALLAFIYEMDTKGPFLVTAPLSTLDNWMNEFA 290
Query: 571 KFCPHLKVEPYYGS---QQERAELRDILEENEGQYDVIVTTYNLAAGTKYDVSFLRNRNF 627
KF P L V YYG+ ++ A+L++ +++ G +++T+Y + D + ++N+
Sbjct: 291 KFAPDLPVLKYYGTNGYKERSAKLKNFFKQHGGT-GIVITSYEIIL---RDTDLIMSQNW 346
Query: 628 DVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFV-- 685
++ DEGH LKN +L KIN RLLLTGTPLQNNL EL SLL FIMP++F
Sbjct: 347 KFLIVDEGHRLKNINCRLIKELKKINTSNRLLLTGTPLQNNLAELWSLLNFIMPDIFADF 406
Query: 686 ---SKKDDLATVFKQKTRTSDA-DKGYNPLLAEHAIERAKTMMKPFILRRKKDQVLKH-L 740
+K D ++ S+A +K N L ++ I T++KPF+LRR K VL + L
Sbjct: 407 EIFNKWFDFDSLNLGSGSNSEALNKLINDELQKNLISNLHTILKPFLLRRLKKVVLANIL 466
Query: 741 PRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVK-----MEKASRNVSKNLIMAL 795
P K +I++C MT Q+ Y+ + ++ + KE +K ++ +VS I
Sbjct: 467 PPKREYIINCPMTSAQEKFYKAGLNGKLK-KTMFKELIKDFFTLNDEYIGHVSNRSI--- 522
Query: 796 RKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFELHKLCCK- 854
+ I+ L + ++ + Y +N +E + + M +L ++
Sbjct: 523 -RDFINYKLSGNETSNTDNKINPTLLQMDKLYKKNLQMEISNKKLQNMM-MQLRQIIDST 580
Query: 855 ----FPSLYKFKLQSDEWM-NSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVL 909
FP L+ L + + SGK++ L+ ++ +I H KVL++S F +LD++E
Sbjct: 581 FLFYFPYLHPEDLTLETLLKTSGKLQILQKLIPPLISEGH-KVLIYSQFVNMLDLIEDWC 639
Query: 910 STLNIKFLRLDGQTQVNDRQSLIDRFYED-DTIPVFLLSTKAGGFGINLVCANNVIIFDQ 968
+ R+DG R+ +++F D +FLLST+A G GINLV A+ V++FD
Sbjct: 640 DLNSFATFRIDGSVNNETRKDQLEKFNSSKDKHNIFLLSTRAAGLGINLVGADTVVLFDS 699
Query: 969 SFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQEDKKN 1027
+NP D QA DR HR+GQ V V L +TIE IL A NK L+ + Q K N
Sbjct: 700 DWNPQVDLQAMDRCHRIGQESPVIVYRLCCDNTIEHVILTRAANKRNLERMVIQMGKFN 758
>CE00789 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 971
Score = 284 bits (727), Expect = 4e-76
Identities = 188/531 (35%), Positives = 282/531 (52%), Gaps = 73/531 (13%)
Query: 501 ELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHHNG-PHLVVVPS 559
E++DYQ G+NWL L N ++ ILADEMGLGKT Q IS + Y+K + PHLV+VP
Sbjct: 93 EMRDYQVRGLNWLASLQHNKINGILADEMGLGKTLQTISMIGYMKHYKNKASPHLVIVPK 152
Query: 560 STLENWLREFNKFCPHLKVEPYYGSQQERAE-LRDILEENEGQYDVIVTTYNLAAGTKYD 618
STL+NW EF K+CP + G + R + LRD++ + +DV TTY + K
Sbjct: 153 STLQNWANEFKKWCPSINAVVLIGDEAARNQVLRDVILPQK--FDVCCTTYEMMLKVKTQ 210
Query: 619 VSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEF 678
L+ N+ ++ DE H +KN S+ + ++N+ RLL+TGTPLQNNL EL +LL F
Sbjct: 211 ---LKKLNWRYIIIDEAHRIKNEKSKLSETVRELNSENRLLITGTPLQNNLHELWALLNF 267
Query: 679 IMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQVLK 738
++P++F S DD + F + + D ++R +++PF+LRR K V K
Sbjct: 268 LLPDIFTS-SDDFDSWFSNDAMSGNTD----------LVQRLHKVLQPFLLRRIKSDVEK 316
Query: 739 HLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSKNLIMALRKA 798
L K ++ ++++Q+ Y K +M+ I K+EKA N++M LRK
Sbjct: 317 SLLPKKEVKVYVGLSKMQREWY---TKVLMKDIDIINGAGKVEKAR---LMNILMHLRKC 370
Query: 799 SIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFELHKLCCKFPSL 858
HP LF EP + TD L
Sbjct: 371 VNHPYLF---------------DGAEP-------------GPPFTTDQHLVD-------- 394
Query: 859 YKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLR 918
NSGK+ L +L K + Q +VL+FS F+++LD+LE + ++ R
Sbjct: 395 -----------NSGKMVVLDKLLMKFKE-QGSRVLIFSQFSRMLDLLEDFCWWRHYEYCR 442
Query: 919 LDGQTQVNDRQSLIDRFYEDDTIP-VFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQ 977
LDG T DR + I+ + D+ +F+L+T+AGG GINL A+ VII+D +NP D Q
Sbjct: 443 LDGSTPHEDRSNAIEAYNAPDSKKFIFMLTTRAGGLGINLATADVVIIYDSDWNPQSDLQ 502
Query: 978 AADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQEDKKNE 1028
A DRAHR+GQ K+V+V LI+ +T++E+I+ A+ KL LD + Q+ + +E
Sbjct: 503 AMDRAHRIGQKKQVRVFRLITENTVDERIIEKAEAKLRLDNIVIQQGRMSE 553
>YOR304w [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1120
Score = 283 bits (724), Expect = 1e-75
Identities = 196/561 (34%), Positives = 292/561 (51%), Gaps = 72/561 (12%)
Query: 488 FIRQKPKLLSSDVELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQT 547
F+ + P + S +L+DYQ G+NWL L++N LS ILADEMGLGKT Q ISFL YL+
Sbjct: 171 FVSESPSFVKSG-KLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYV 229
Query: 548 HH-NGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAEL-RDILEENEGQYDVI 605
GP L++VP STL+NW REF K+ P++ V +G + RA++ R+I+ E ++DV+
Sbjct: 230 KQIEGPFLIIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIVRNII--LEARFDVL 287
Query: 606 VTTYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPL 665
+T+Y + K + L+ + +V DE H +KN S + + RLL+TGTPL
Sbjct: 288 ITSYEMVIREK---NALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPL 344
Query: 666 QNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMK 725
QNNL EL +LL F++P++F + F+Q D E I++ +++
Sbjct: 345 QNNLHELWALLNFLLPDIF-GDSELFDEWFEQNNSEQD---------QEIVIQQLHSVLN 394
Query: 726 PFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASR 785
PF+LRR K V K L K ++ MT++Q Y K ++E G ++ +
Sbjct: 395 PFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWY----KSLLEKDIDAVNGAVGKREGK 450
Query: 786 NVSKNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTD 845
N++M LRK HP LF E + Y TD
Sbjct: 451 TRLLNIVMQLRKCCNHPYLF----------------------------EGAEPGPPYTTD 482
Query: 846 FELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDIL 905
L NSGK+ L +L ++ + + +VL+FS +++LDIL
Sbjct: 483 EHL-------------------IFNSGKMIILDKLLKRLKE-KGSRVLIFSQMSRLLDIL 522
Query: 906 EFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIP-VFLLSTKAGGFGINLVCANNVI 964
E + ++ R+DG T +R ID + + ++ VFLL+T+AGG GINLV A+ VI
Sbjct: 523 EDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPNSEKFVFLLTTRAGGLGINLVTADTVI 582
Query: 965 IFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQED 1024
+FD +NP D QA DRAHR+GQ K+V V ++ + IEEK++ A KL LD + Q+
Sbjct: 583 LFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQQG 642
Query: 1025 K-KNEEALENKVTDLLEDIIF 1044
K +L N DLL+ I F
Sbjct: 643 TGKKTASLGNSKDDLLDMIQF 663
>SPBP35G2.10 [R] KOG0383 Predicted helicase
Length = 1418
Score = 283 bits (724), Expect = 1e-75
Identities = 194/538 (36%), Positives = 280/538 (51%), Gaps = 73/538 (13%)
Query: 502 LKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHHNGPHLVVVPSST 561
L YQ G+NWL+L + CILADEMGLGKT QVISF++ L H P LV+VP +T
Sbjct: 556 LMPYQLKGLNWLYLRWYTHHPCILADEMGLGKTVQVISFISVLFYRHKCFPVLVIVPHAT 615
Query: 562 LENWLREFNKFCPHLKVEPYYGSQQERAELRD--ILEENEGQYDVIVTTYNL---AAGTK 616
+ NW RE K+ P L++ GS++ R+ +RD ++ + + ++ V+T+ L A+ +
Sbjct: 616 VANWERELKKWAPFLQINVLVGSEKNRSLVRDYRLINQKDPKH---VSTHVLVISASNVE 672
Query: 617 YDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLL 676
++S LR + V++ DEG LKN S F L + + F+LLLTGTPLQNN++EL +LL
Sbjct: 673 REISLLRKFQWKVLIVDEGQRLKNDQSSLFYYLSSVKSDFKLLLTGTPLQNNVRELFNLL 732
Query: 677 EFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQV 736
+F+ P K ++ +K Y+ + E E ++KPF LRR K +V
Sbjct: 733 QFLNP---------------MKINAAELEKRYSIIDTEKVTE-LHQILKPFFLRRVKSEV 776
Query: 737 LKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIK--EGVKMEKASRNVS-KNLIM 793
L + P K I+ MT +QK LY+ + + + R I R S N++M
Sbjct: 777 LDNFPTKVEVIIPLSMTPVQKGLYKSILSKNLSLLRNITGYANTSSSGGQRTTSLNNILM 836
Query: 794 ALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFELHKLCC 853
LRK HP ++ P+ E+ N+ Y + L + C
Sbjct: 837 QLRKTLAHPYIY------------------SPD-IEDRNLPY------ELAMRSLEEASC 871
Query: 854 KFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLN 913
KF L+ ++ K+I H ++L+FS F Q LDILE N
Sbjct: 872 KFLI-------------------LRLLVPKLITRGH-RILLFSQFIQQLDILEDWFEYKN 911
Query: 914 IKFLRLDGQTQVNDRQSLIDRFYEDDT-IPVFLLSTKAGGFGINLVCANNVIIFDQSFNP 972
I + R DG + +RQS ID F ++ + FLLST+AGG GINL A+ VII D FNP
Sbjct: 912 IAYARFDGASSEMERQSAIDSFNAPNSELSCFLLSTRAGGVGINLASADTVIILDPDFNP 971
Query: 973 HDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQEDKKNEEA 1030
H D QA RAHR GQ K+V V L +RD++EEKI+ A+ KL LD I + +N +
Sbjct: 972 HQDMQAIARAHRYGQKKKVLVFVLTTRDSVEEKIIQNAQKKLVLDHLIVESLDQNHNS 1029
>CE05553 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1474
Score = 280 bits (716), Expect = 8e-75
Identities = 193/549 (35%), Positives = 288/549 (52%), Gaps = 67/549 (12%)
Query: 502 LKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQT-HHNGPHLVVVPSS 560
LK YQ G+ W+ LY N+L+ ILADEMGLGKT Q IS + YL + +NGP+LV+VP S
Sbjct: 533 LKPYQIKGLEWMVSLYNNNLNGILADEMGLGKTIQTISLVTYLMEVKQNNGPYLVIVPLS 592
Query: 561 TLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQYDVIVTTYNLAAGTKYDVS 620
TL NW EF K+ P + Y G++ R + + +G ++V++TTY K +
Sbjct: 593 TLSNWQNEFAKWAPSVTTIIYKGTKDARRRVEG--QIRKGAFNVLMTTYEYVIKEK---A 647
Query: 621 FLRNRNFDVVVYDEGHMLKNSMSERFNKLMK-INAHFRLLLTGTPLQNNLKELMSLLEFI 679
L + ++ DEGH LKN + L +A RLLLTGTPLQN L EL +LL F+
Sbjct: 648 LLGKIRWKYMIIDEGHRLKNHNCKLTLMLNGFFHAQHRLLLTGTPLQNKLPELWALLNFL 707
Query: 680 MPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEH----AIERAKTMMKPFILRRKKDQ 735
+P++F S F+Q A G L + I R +++PF+LRR K +
Sbjct: 708 LPSIFSS-----CGTFEQWFNAPFATTGEKVELNQEETMLIIRRLHKVLRPFLLRRLKKE 762
Query: 736 VLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSKNLIMAL 795
V LP K +++ C+ + LQK +Y+ K ++ KM +R++ N ++ L
Sbjct: 763 VESQLPDKTEYVIKCDQSALQKVIYRHMQKGLL-------LDAKMSSGARSL-MNTVVHL 814
Query: 796 RKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFELHKLCCKF 855
RK HP LF +I E+ Y K + TD
Sbjct: 815 RKLCNHPFLFPNI--------------------EDSCRAYWKVNEVNGTDL--------- 845
Query: 856 PSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIK 915
+GK+E L +L K+ H ++L+F T +++I E L+
Sbjct: 846 ------------MRVAGKLELLDRILPKLKATGH-RILMFFQMTSMMNIFEDFLNFRRYT 892
Query: 916 FLRLDGQTQVNDRQSLIDRFYEDDT-IPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHD 974
+LRLDG T+ ++R L+ +F ++ + +F+LST+AGG G+NL A+ VIIFD +NPH
Sbjct: 893 YLRLDGSTKPDERGDLLTQFNAPNSDLFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQ 952
Query: 975 DRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQEDKKNEEALENK 1034
D QA DRAHR+GQ KEV+V LI+ +++EEKIL A+ KL +D + Q K ++ + +
Sbjct: 953 DMQAQDRAHRIGQKKEVRVLRLITANSVEEKILAAARYKLNVDEKVIQAGKFDQRSTGAE 1012
Query: 1035 VTDLLEDII 1043
+LE II
Sbjct: 1013 RKQMLEQII 1021
>Hs21071044 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1054
Score = 278 bits (710), Expect = 4e-74
Identities = 195/542 (35%), Positives = 284/542 (51%), Gaps = 91/542 (16%)
Query: 502 LKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHH-NGPHLVVVPSS 560
L+DYQ G+NWL LY+N ++ ILADEMGLGKT Q I+ L YLK + GPH+V+VP S
Sbjct: 183 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 242
Query: 561 TLENWLREFNKFCPHLKVEPYYGSQQERAE-LRDILEENEGQYDVIVTTYNLAAGTKYDV 619
TL NW+ EF ++ P L+V + G + RA +RD E G++DV VT+Y + K
Sbjct: 243 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRD--EMMPGEWDVCVTSYEMVIKEK--- 297
Query: 620 SFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFI 679
S + ++ +V DE H +KN S+ + + + RLLLTGTPLQNNL EL +LL F+
Sbjct: 298 SVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFL 357
Query: 680 MPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQVLKH 739
+P++F + DD + F K D + +ER ++KPF+LRR K V K
Sbjct: 358 LPDVF-NSADDFDSWFDTKNCLGD----------QKLVERLHAVLKPFLLRRIKTDVEKS 406
Query: 740 LPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSKNLIMALRKAS 799
LP K ++ ++++Q+ Y K +M+ + KM+K N++M LRK
Sbjct: 407 LPPKKEIKIYLGLSKMQREWY---TKILMKDIDVLNSSGKMDKMR---LLNILMQLRKCC 460
Query: 800 IHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFELHKLCCKFPSLY 859
HP LF EP Y TD +
Sbjct: 461 NHPYLF---------------DGAEP-------------GPPYTTDEHIVS--------- 483
Query: 860 KFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRL 919
NSGK+ L +L K+ + Q +VL+FS T++LDILE ++ RL
Sbjct: 484 ----------NSGKMVVLDKLLAKLKE-QGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532
Query: 920 DGQTQVNDRQSLIDRFYEDDTIP----------------VFLLSTKAGGFGINLVCANNV 963
DGQT +R+ D+F E + + +F+LST+AGG GINL A+ V
Sbjct: 533 DGQTPHEERE---DKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVV 589
Query: 964 IIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQE 1023
I++D +NP D QA DRAHR+GQ K V+V LI+ +T+EE+I+ A+ KL LD+ + Q+
Sbjct: 590 ILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQ 649
Query: 1024 DK 1025
+
Sbjct: 650 GR 651
>At5g66750 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 764
Score = 276 bits (707), Expect = 9e-74
Identities = 190/580 (32%), Positives = 299/580 (50%), Gaps = 56/580 (9%)
Query: 469 ARTKQKKTSITQLRNNQMKFIRQKPKL--LSSDVELKDYQQTGINWLHLLYQNDLSCILA 526
+R+K+ +I + I+ + +L L + +LK YQ G+ WL L+QN L+ ILA
Sbjct: 167 SRSKEDGETINSDLTEEETVIKLQNELCPLLTGGQLKSYQLKGVKWLISLWQNGLNGILA 226
Query: 527 DEMGLGKTCQVISFLAYLKQTHHNGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQ 586
D+MGLGKT Q I FL++LK +GP+LV+ P STL NW E +F P + Y+G +
Sbjct: 227 DQMGLGKTIQTIGFLSHLKGNGLDGPYLVIAPLSTLSNWFNEIARFTPSINAIIYHGDKN 286
Query: 587 ERAEL-RDILEENEG-QYDVIVTTYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSE 644
+R EL R + + G ++ +++T+Y +A + LR+ + VV DEGH LKN +
Sbjct: 287 QRDELRRKHMPKTVGPKFPIVITSYEVAMNDAKRI--LRHYPWKYVVIDEGHRLKNHKCK 344
Query: 645 RFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDA 704
+L + +LLLTGTPLQNNL EL SLL FI+P++F S + + + ++A
Sbjct: 345 LLRELKHLKMDNKLLLTGTPLQNNLSELWSLLNFILPDIFTSHDEFESWFDFSEKNKNEA 404
Query: 705 DKGYNPLLAEHAIERAKTMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEI 764
K + + +++PFILRR K V LPRK I++ MT+ QK + +
Sbjct: 405 TKEEEEKRRAQVVSKLHGILRPFILRRMKCDVELSLPRKKEIIMYATMTDHQKKFQEHLV 464
Query: 765 KQVMEHRRKIKEGVKMEKASRNVSKNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXE 824
+E + E + + NL++ LRK HP L +
Sbjct: 465 NNTLE--AHLGENAIRGQGWKGKLNNLVIQLRKNCNHPDLLQ------------------ 504
Query: 825 PEYYENGNIEYIKEDMSYMTDFELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKI 884
G I D SY+ +P + + Q GK L+ +L ++
Sbjct: 505 ------GQI-----DGSYL-----------YPPVEEIVGQ------CGKFRLLERLLVRL 536
Query: 885 IDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFY-EDDTIPV 943
H KVL+FS +T++LDI+++ S + R+DG ++++R+ I F E + +
Sbjct: 537 FANNH-KVLIFSQWTKLLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCSI 595
Query: 944 FLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIE 1003
FLLST+AGG GINL A+ I++D +NP D QA DR HR+GQTK V V L + +IE
Sbjct: 596 FLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIE 655
Query: 1004 EKILHLAKNKLALDTHISQEDKKNEEALENKVTDLLEDII 1043
++L A +KL L+ + + + ++E ++ EDI+
Sbjct: 656 TRVLKRAYSKLKLEHVVIGQGQFHQERAKSSTPLEEEDIL 695
>ECU10g1320 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 823
Score = 273 bits (697), Expect = 1e-72
Identities = 187/544 (34%), Positives = 286/544 (52%), Gaps = 80/544 (14%)
Query: 501 ELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQT-HHNGPHLVVVPS 559
EL+DYQ G+NWL +++N ++CILADEMGLGKT Q I+FL Y++ HL+++P
Sbjct: 52 ELRDYQIEGLNWLINMHENSINCILADEMGLGKTLQTIAFLGYIRYVKKERKRHLIILPK 111
Query: 560 STLENWLREFNKFCPHLKVEPYYGSQQE-RAELRDILEENEGQYDVIVTTYNLAAGTKYD 618
STL NW REF KF P+ KV +Y S++E R E +I+ ++D +TTY + +
Sbjct: 112 STLANWRREFRKFMPNYKVRVFYSSRKEMRREAEEIM---SSRWDACLTTYEMCINAR-- 166
Query: 619 VSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKI-NAHFRLLLTGTPLQNNLKELMSLLE 677
S L + +V DE H +KN S +K+++I + RLL+TGTPLQNN+ EL +LL
Sbjct: 167 -SILNTVKWSYIVIDEAHRIKNEHS-LLSKIVRIFSCDHRLLITGTPLQNNVHELWALLN 224
Query: 678 FIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQVL 737
FI+P +F + A F+ D G AI R +++++ F LRR+K V
Sbjct: 225 FIVPEIF-----NDAEKFESYVMNIDEGDG-------EAIRRIRSVLQLFFLRREKIDVE 272
Query: 738 KHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSKNLIMALRK 797
LP K L+ +++ +Q+ Y+ +K+ + ++ + + N++M LRK
Sbjct: 273 MSLPPKKIVNLYSKLSPMQREWYRMLLKRDLSPLGSTRD-------PKGMLMNVVMQLRK 325
Query: 798 ASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFELHKLCCKFPS 857
HP LF EP+ Y N ++I E
Sbjct: 326 CCNHPYLF---------------PDAEPKPYTND--KHIIE------------------- 349
Query: 858 LYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFL 917
NSGK+ L +L + + +VL+FS + +LDILE ++
Sbjct: 350 ------------NSGKMIVLDKLLAS-LKAKGSRVLIFSQMSMMLDILEDYAMFREYEYC 396
Query: 918 RLDGQTQVNDRQSLIDRFYEDDTIP-VFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDR 976
R+DG T DR ID F + + +FLL+T+AGG GINL A+ VI+FD +NP D
Sbjct: 397 RIDGSTSYRDRTEAIDGFNAEGSEKFLFLLTTRAGGLGINLSTADTVILFDSDWNPQMDL 456
Query: 977 QAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQ-EDKKNEEALENKV 1035
QA DRAHR+GQ K+V V LIS +T+EE+I++ + KL LD + Q ++ ++++
Sbjct: 457 QAQDRAHRIGQKKQVVVFRLISENTVEERIVYRSLQKLKLDDILLQGRYHRSSSVSQSEL 516
Query: 1036 TDLL 1039
D+L
Sbjct: 517 IDIL 520
>At5g44800 [R] KOG0383 Predicted helicase
Length = 2228
Score = 272 bits (695), Expect = 2e-72
Identities = 196/557 (35%), Positives = 287/557 (51%), Gaps = 91/557 (16%)
Query: 505 YQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLK-QTHHNGPHLVVVPSSTLE 563
+Q +NWL + + ILADEMGLGKT +FL+ L + P LV+VP ST+
Sbjct: 678 HQLEALNWLRRCWHKSKNVILADEMGLGKTVSASAFLSSLYFEFGVARPCLVLVPLSTMP 737
Query: 564 NWLREFNKFCPHLKVEPYYGSQQERAELRDI-----------LEENEGQYDVIVTTYNLA 612
NWL EF+ + P L V Y+GS + RA +RD + +++V++TTY +
Sbjct: 738 NWLSEFSLWAPLLNVVEYHGSAKGRAIIRDYEWHAKNSTGTTKKPTSYKFNVLLTTYEMV 797
Query: 613 AGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKEL 672
D S LR ++V+V DEGH LKNS S+ F+ L + R+LLTGTPLQNN+ E+
Sbjct: 798 LA---DSSHLRGVPWEVLVVDEGHRLKNSESKLFSLLNTFSFQHRVLLTGTPLQNNIGEM 854
Query: 673 MSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILRRK 732
+LL F+ P+ F S S ++ ++ L + +E K ++ P +LRR
Sbjct: 855 YNLLNFLQPSSFPS--------------LSSFEERFHDLTSAEKVEELKKLVAPHMLRRL 900
Query: 733 KDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSKNLI 792
K ++++P K ++ E+T +Q Y+ + + + R I +GV + N++
Sbjct: 901 KKDAMQNIPPKTERMVPVELTSIQAEYYRAMLTKNYQILRNIGKGVAQQS-----MLNIV 955
Query: 793 MALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFELHKLC 852
M LRK HP L EP E+G++E+ LH +
Sbjct: 956 MQLRKVCNHPYLI---------------PGTEP---ESGSLEF------------LHDMR 985
Query: 853 CKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTL 912
K S K+ L S+L K++ + +VL+FS T++LDILE L
Sbjct: 986 IK---------------ASAKLTLLHSML-KVLHKEGHRVLIFSQMTKLLDILE---DYL 1026
Query: 913 NIK-----FLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKAGGFGINLVCANNVIIFD 967
NI+ F R+DG V DRQ+ I RF +D VFLLST+A G GINL A+ VII+D
Sbjct: 1027 NIEFGPKTFERVDGSVAVADRQAAIARFNQDKNRFVFLLSTRACGLGINLATADTVIIYD 1086
Query: 968 QSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALD---THISQED 1024
FNPH D QA +RAHR+GQ+K + V L+ R ++EE+IL LAK KL LD + S
Sbjct: 1087 SDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQ 1146
Query: 1025 KKNEEALENKVTDLLED 1041
K+ E+ L +L D
Sbjct: 1147 KEFEDILRWGTEELFND 1163
>7295870 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1883
Score = 271 bits (692), Expect = 5e-72
Identities = 194/549 (35%), Positives = 278/549 (50%), Gaps = 92/549 (16%)
Query: 489 IRQKPKLLSSDVELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTH 548
I+ +P+ LSS + L+DYQ G+NWL + + S ILADEMGLGKT Q I FL L + H
Sbjct: 515 IKNQPEFLSSGLTLRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIH 574
Query: 549 H-NGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQYD---- 603
H GP L VVP ST+ W REF+ + P + V Y G + R+++++ E Q++
Sbjct: 575 HLYGPFLCVVPLSTMTAWQREFDLWAPDMNVVTYLGD----IKSRELIQQYEWQFESSKR 630
Query: 604 ----VIVTTYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLL 659
I+TTY + D FL + ++ DE H LKN S + L + + + RLL
Sbjct: 631 LKFNCILTTYEIVL---KDKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLL 687
Query: 660 LTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIER 719
+TGTPLQN+LKEL +LL FIMP+ F D F+ + ++ DKGY R
Sbjct: 688 ITGTPLQNSLKELWALLHFIMPDKF-----DTWENFEVQHGNAE-DKGYT---------R 732
Query: 720 AKTMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVK 779
++P+ILRR K V K LP K IL EMT LQK Y+ + + + RK K G
Sbjct: 733 LHQQLEPYILRRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNFDALRKGKRG-- 790
Query: 780 MEKASRNVSKNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKED 839
S + N+++ L+K H L R
Sbjct: 791 ----STSTFLNIVIELKKCCNHAALIR--------------------------------- 813
Query: 840 MSYMTDFELHKLCCKFPSLYKFKLQSDEWM-----NSGKVEQLKSVLHKIIDIQHEKVLV 894
++FEL LQ DE + SGK+ L +L ++ + H +VL+
Sbjct: 814 ---PSEFEL------------MGLQQDEALQTLLKGSGKLVLLDKLLCRLKETGH-RVLI 857
Query: 895 FSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIP-VFLLSTKAGGF 953
FS ++LD+L L + F RLDG + R+ +D F + + FLLST+AGG
Sbjct: 858 FSQMVRMLDVLADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGL 917
Query: 954 GINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNK 1013
GINL A+ VIIFD +NP +D QA RAHR+GQ +V + L++ ++EE+I+ AK K
Sbjct: 918 GINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQK 977
Query: 1014 LALDTHISQ 1022
+ LD + Q
Sbjct: 978 MVLDHLVIQ 986
>Hs4557449 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1739
Score = 270 bits (689), Expect = 1e-71
Identities = 197/566 (34%), Positives = 287/566 (49%), Gaps = 86/566 (15%)
Query: 485 QMKFIRQKPKLLS----------SDVELKDYQQTGINWLHLLYQNDLSCILADEMGLGKT 534
+ K ++Q+P+ ++ ++EL+DYQ G+NWL + + S ILADEMGLGKT
Sbjct: 457 ECKALKQRPRFVALKKQPAYLGGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKT 516
Query: 535 CQVISFLAYLKQTHH-NGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRD 593
Q ISFL+YL H GP L+VVP STL +W REF + P + V Y G R +R+
Sbjct: 517 IQTISFLSYLFHQHQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIRE 576
Query: 594 I----LEENEGQYDVIVTTYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKL 649
+ +++ ++TTY + K + L + N+ + DE H LKN S + L
Sbjct: 577 YEWIHSQTKRLKFNALITTYEILLKDK---TVLGSINWAFLGVDEAHRLKNDDSLLYKTL 633
Query: 650 MKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYN 709
+ ++ RLL+TGTPLQN+LKEL SLL FIMP F +D F++ D KG
Sbjct: 634 IDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWED-----FEE-----DHGKG-- 681
Query: 710 PLLAEHAIERAKTMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVME 769
E+ + +++PF+LRR K V K LP K IL EM+ LQK Y+ +
Sbjct: 682 ---RENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWIL----- 733
Query: 770 HRRKIKEGVKMEKASRNVSKNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYE 829
R K K + S + N++M L+K H L + PE E
Sbjct: 734 -TRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIK-----------------PPEENE 775
Query: 830 NGNIEYIKEDMSYMTDFELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQH 889
N + I SL + +SGK+ L +L ++ + +
Sbjct: 776 RENGQEI------------------LLSLIR---------SSGKLILLDKLLTRLRE-RG 807
Query: 890 EKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIP-VFLLST 948
+VL+FS ++LDIL L+ + F RLDG + R+ +D F D + FLLST
Sbjct: 808 NRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLST 867
Query: 949 KAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILH 1008
+AGG GINL A+ V+IFD +NP +D QA RAHR+GQ K+V + L+++ T+EE+I+
Sbjct: 868 RAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIE 927
Query: 1009 LAKNKLALDTHISQE-DKKNEEALEN 1033
AK K+ LD + Q D LEN
Sbjct: 928 RAKKKMVLDHLVIQRMDTTGRTILEN 953
>Hs20536191 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 897
Score = 270 bits (689), Expect = 1e-71
Identities = 187/522 (35%), Positives = 270/522 (50%), Gaps = 73/522 (13%)
Query: 500 VELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLK-QTHHNGPHLVVVP 558
+ L+ YQ G+NWL + CIL DEMGLGKTCQ I+ YL + + GP L++ P
Sbjct: 44 IHLRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCP 103
Query: 559 SSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQYDVIVTTYNLAAGTKYD 618
S L NW E +F P L Y G ++ERA L+ L++ E ++ V++TTY + D
Sbjct: 104 LSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDLKQ-ESRFHVLLTTYEICLK---D 159
Query: 619 VSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEF 678
SFL++ + V+V DE H LKN S L + + F LLLTGTP+QN+L+EL SLL F
Sbjct: 160 ASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSF 219
Query: 679 IMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQVLK 738
+ P+LF K+++ + R D +K +E E K +++PF+LRR K +V
Sbjct: 220 VEPDLF--SKEEVGDFIQ---RYQDIEKE-----SESGNELHK-LLQPFLLRRVKAEVAT 268
Query: 739 HLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSKNLIMALRKA 798
LP+K +++ M+ LQK Y+ + K + + E A + +N++ LRK
Sbjct: 269 ELPKKTEVVIYHGMSALQKKYYKAIL-------MKDLDAFENETAKKVKLQNILSQLRKC 321
Query: 799 SIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFELHKLCCKFPSL 858
HP LF + EPE +E G+ ++T+
Sbjct: 322 VDHPYLFDGV---------------EPEPFEVGD---------HLTE------------- 344
Query: 859 YKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLR 918
SGK+ L +L + H +VL+FS TQ+LDIL+ + + R
Sbjct: 345 -----------ASGKLHLLDKLLAFLYSGGH-RVLLFSQMTQMLDILQDYMDYRGYSYER 392
Query: 919 LDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQA 978
+DG + +R I F + I VFLLST+AGG G+NL A+ VI D FNP +D QA
Sbjct: 393 VDGSVRGEERHLAIKNFGQ-QPIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQA 451
Query: 979 ADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHI 1020
A RAHR+GQ K V+V LI RDT+EE + A +KL L I
Sbjct: 452 AARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMI 493
>At5g18620 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1063
Score = 269 bits (687), Expect = 2e-71
Identities = 185/537 (34%), Positives = 275/537 (50%), Gaps = 75/537 (13%)
Query: 501 ELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHH-NGPHLVVVPS 559
+L+DYQ G+NWL LY+N ++ ILADEMGLGKT Q IS LAYL + NGPH+VV P
Sbjct: 180 KLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAPK 239
Query: 560 STLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQYDVIVTTYNLAAGTKYDV 619
STL NW+ E +FCP L+ + G+ +ER +R+ L G++D+ VT++ +A K
Sbjct: 240 STLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREELLV-AGKFDICVTSFEMAIKEK--- 295
Query: 620 SFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFI 679
+ LR ++ ++ DE H +KN S + + ++RLL+TGTPLQNNL EL +LL F+
Sbjct: 296 TTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFL 355
Query: 680 MPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQVLKH 739
+P +F S A F + + S + + +++ +++PF+LRR K V K
Sbjct: 356 LPEVFSS-----AETFDEWFQISGEND------QQEVVQQLHKVLRPFLLRRLKSDVEKG 404
Query: 740 LPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSKNLIMALRKAS 799
LP K IL M+++QK Y+ +++ +E V R N+ M LRK
Sbjct: 405 LPPKKETILKVGMSQMQKQYYKALLQKDLE--------VVNGGGERKRLLNIAMQLRKCC 456
Query: 800 IHPLLFRHIYNDXXXXXXXXXXXXEP-EYYENGNIEYIKEDMSYMTDFELHKLCCKFPSL 858
HP LF+ EP Y G+ + D L KL + +
Sbjct: 457 NHPYLFQ---------------GAEPGPPYTTGDHLVTNAGKMVLLDKLLPKLKDRDSRV 501
Query: 859 YKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLR 918
F S + +++DI LE L ++ R
Sbjct: 502 LIF-----------------SQMTRLLDI-----------------LEDYLMYRGYQYCR 527
Query: 919 LDGQTQVNDRQSLIDRFYEDDTIP-VFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQ 977
+DG T ++R + I+ + + + VFLLST+AGG GINL A+ VI++D +NP D Q
Sbjct: 528 IDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQ 587
Query: 978 AADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQEDKKNEEALENK 1034
A DRAHR+GQ KEVQV + + IE K++ A KLALD + Q+ + E+ NK
Sbjct: 588 AQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAYKKLALDALVIQQGRLAEQKTVNK 644
>At3g06400 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1057
Score = 266 bits (681), Expect = 1e-70
Identities = 185/546 (33%), Positives = 279/546 (50%), Gaps = 75/546 (13%)
Query: 501 ELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHH-NGPHLVVVPS 559
+++DYQ G+NWL LY+N ++ ILADEMGLGKT Q IS LAYL + NGPH+VV P
Sbjct: 188 KMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAPK 247
Query: 560 STLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQYDVIVTTYNLAAGTKYDV 619
STL NW+ E +FCP L+ + G+ +ER +R+ L G++D+ VT++ +A K
Sbjct: 248 STLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLV-AGKFDICVTSFEMAIKEK--- 303
Query: 620 SFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFI 679
+ LR ++ ++ DE H +KN S + + ++RLL+TGTPLQNNL EL +LL F+
Sbjct: 304 TALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFL 363
Query: 680 MPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQVLKH 739
+P +F S A F + + S + + +++ +++PF+LRR K V K
Sbjct: 364 LPEIFSS-----AETFDEWFQISGEND------QQEVVQQLHKVLRPFLLRRLKSDVEKG 412
Query: 740 LPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSKNLIMALRKAS 799
LP K IL M+++QK Y+ +++ +E + G R N+ M LRK
Sbjct: 413 LPPKKETILKVGMSQMQKQYYKALLQKDLE---AVNAG-----GERKRLLNIAMQLRKCC 464
Query: 800 IHPLLFRHIYNDXXXXXXXXXXXXEP-EYYENGNIEYIKEDMSYMTDFELHKLCCKFPSL 858
HP LF+ EP Y G+ + D L KL + +
Sbjct: 465 NHPYLFQ---------------GAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRV 509
Query: 859 YKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLR 918
F S + +++DI LE L + R
Sbjct: 510 LIF-----------------SQMTRLLDI-----------------LEDYLMYRGYLYCR 535
Query: 919 LDGQTQVNDRQSLIDRFYEDDTIP-VFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQ 977
+DG T ++R + I+ + + + VFLLST+AGG GINL A+ VI++D +NP D Q
Sbjct: 536 IDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQ 595
Query: 978 AADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQEDKKNEEALENKVTD 1037
A DRAHR+GQ KEVQV + IEEK++ A KLALD + Q+ + E+ ++ D
Sbjct: 596 AQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQQGRLAEQKSKSVNKD 655
Query: 1038 LLEDII 1043
L ++
Sbjct: 656 ELLQMV 661
>Hs21914927 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 838
Score = 262 bits (669), Expect = 2e-69
Identities = 177/550 (32%), Positives = 285/550 (51%), Gaps = 42/550 (7%)
Query: 491 QKPKLLSSDVELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHHN 550
Q+PK + V ++ YQ G+ WL +L++N ++ ILADEMGLGKT Q I+ +A + Q
Sbjct: 213 QQPKHFTGGV-MRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIALMIQRGVP 271
Query: 551 GPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQ---YDVIVT 607
GP LV P STL NW+ EF +F P + Y+G+Q+ER +L + + +G + V++T
Sbjct: 272 GPFLVCGPLSTLPNWMAEFKRFTPDIPTMLYHGTQEERQKLVRNIYKRKGTLQIHPVVIT 331
Query: 608 TYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQN 667
++ +A D + L++ + ++ DEGH +KN +L + NA +LLLTGTPLQN
Sbjct: 332 SFEIA---MRDRNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQN 388
Query: 668 NLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAE---HAIERAKTMM 724
NL EL SLL F++P++F DDL + TS ++ + + E + + ++
Sbjct: 389 NLSELWSLLNFLLPDVF----DDLKSFESWFDITSLSETAEDIIAKEREQNVLHMLHQIL 444
Query: 725 KPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHR--RKIKEGVKMEK 782
PF+LRR K V +P K +++ +++ Q+ Y + + + + KE +++
Sbjct: 445 TPFLLRRLKSDVALEVPPKREVVVYAPLSKKQEIFYTAIVNRTIANMFGSSEKETIELSP 504
Query: 783 ASRNVSKNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSY 842
R + RK+ + + +D +PE + + +
Sbjct: 505 TGRPKRRT-----RKSINYSKI-----DDFPNELEKLISQIQPEVDRERAVVEVNIPVES 554
Query: 843 MTDFELHKL------CCKFPSL---------YKFKLQSDEWMNSGKVEQLKSVLHKIIDI 887
+ +L + CC P L +FK+ + NSGK L +L ++
Sbjct: 555 EVNLKLQNIMMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKR 614
Query: 888 QHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLS 947
H KVL+FS T +LDIL + F RLDG ++R+ + F D + +FL+S
Sbjct: 615 GH-KVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVS 673
Query: 948 TKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKIL 1007
T+AGG GINL A+ VII+D +NP D QA DR HR+GQTK V V L++ +TI++KI+
Sbjct: 674 TRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIV 733
Query: 1008 HLAKNKLALD 1017
A K L+
Sbjct: 734 ERAAAKRKLE 743
>CE18196 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 2957
Score = 262 bits (669), Expect = 2e-69
Identities = 202/584 (34%), Positives = 295/584 (49%), Gaps = 95/584 (16%)
Query: 494 KLLSSDVELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHHNGPH 553
K+ + L++YQ G++WL Y N +CILADEMGLGKT Q I+FL+ + +GP
Sbjct: 1179 KVWKNGNSLREYQFEGVDWLLYCYYNAQNCILADEMGLGKTVQTITFLSRIYDYGIHGPF 1238
Query: 554 LVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQY----------- 602
LVVVP ST++NW+REF + + Y+GS A R++L++ E Y
Sbjct: 1239 LVVVPLSTIQNWVREFETW-TDMNAIVYHGS----AYAREVLQQYEVFYDKRHCGAKNWK 1293
Query: 603 ------DVIVTTYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERF-NKLMKINAH 655
D ++TT+ DV FL+ + V V DE H LKN + N L+
Sbjct: 1294 KNFVKIDALITTFETVVS---DVEFLKKIPWRVCVIDEAHRLKNRNCKLLVNGLLAFRME 1350
Query: 656 FRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEH 715
R+LLTGTPLQNN+ EL SLL F+ P F D+ AT +Q + +
Sbjct: 1351 HRVLLTGTPLQNNIDELFSLLNFLHPQQF----DNSATFLEQ----------FGSCQTDD 1396
Query: 716 AIERAKTMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIK 775
+++ + ++KP +LRR K+ V K L K I+ +++++QK Y+ +++ H K
Sbjct: 1397 QVQKLQEILKPMMLRRLKEDVEKSLGPKEETIIEVQLSDMQKKFYRAILERNFSHLCK-- 1454
Query: 776 EGVKMEKASRNVSKNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEY 835
S N++M LRK HP L NG E
Sbjct: 1455 ------GTSAPSLMNVMMELRKCCNHPFLI------------------------NGAEEA 1484
Query: 836 IKEDMSYMTDFEL-HKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLV 894
I M DF L H + +K +Q+ SGKV ++ +L K+ H KVL+
Sbjct: 1485 I------MNDFRLAHPDWDEETLAHKALIQA-----SGKVVLIEKLLPKLRKDGH-KVLI 1532
Query: 895 FSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIP-VFLLSTKAGGF 953
FS +VLD+LE L +++ F R+DG + + RQ+ IDRF ++++ VFLL T+AGG
Sbjct: 1533 FSQMVKVLDLLEEFLISMSYPFERIDGNVRGDLRQAAIDRFSKENSDRFVFLLCTRAGGL 1592
Query: 954 GINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNK 1013
GINL A+ VIIFD +NP +D QA R HR+GQ K V+V LI+ +T E ++ A K
Sbjct: 1593 GINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQKKLVKVYRLITSNTYEREMFDKASLK 1652
Query: 1014 LALDTHISQED---KKNEEALENK-VTDLLE-----DIIFDENQ 1048
L LD + Q K AL K V +LL+ I+ +EN+
Sbjct: 1653 LGLDKAVLQSTTALKAEGTALSKKDVEELLKKGAYGSIMDEENE 1696
>Hs22047300 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1970
Score = 260 bits (664), Expect = 9e-69
Identities = 257/902 (28%), Positives = 399/902 (43%), Gaps = 146/902 (16%)
Query: 145 PNSPMDLSKSRLISLKEGGSSGNSIKSNPAINLPSRNVSTSKITIEKQKTSIFDRYSHVM 204
P P + K++ + K S +S K P S K + K KT + S +
Sbjct: 108 PKEPKE-KKAKTATPKPKSSKKSSNKK------PDSEASALKKKVNKGKTEGSEN-SDLD 159
Query: 205 KVSQPSPARSMADRTTMSTIKNLSSKKGKLVRGDAIKKKQKIKLSDDEEDEITDQSNDDG 264
K PSP + + K SS++ K R + + K+SD+E D+ D + D
Sbjct: 160 KTPPPSPPPEEDEDPGVQ--KRRSSRQVKRKR---YTEDLEFKISDEEADD-ADAAGRDS 213
Query: 265 ELDTEPEYEEKVTESNFDQVLKFLNEADPKDLADLGEISIEKAALVIKERPFEDLE-QFQ 323
+T +++ ++ V K ++ K + GE +E +K + F L Q+
Sbjct: 214 PSNTSQSEQQESVDAEGPVVEKIMSSRSVKKQKESGE-EVEIEEFYVKYKNFSYLHCQWA 272
Query: 324 QLDFQSKSPSPAPGKARKSQQKKDGLKILDKIEQSIKGYNAIESLIRKCSKYGDVIANQM 383
++ K +I+Q IK + A + + S+ D + N
Sbjct: 273 SIEDLEKDK---------------------RIQQKIKRFKAKQGQNKFLSEIEDELFNP- 310
Query: 384 TNWGVDFSSSKDTELNILDVDTYSDDEANETITNDSANVQIIKSSTTSRENSLGPSKRKR 443
D+ E++ + S D+ E +T+ ++K + E+S ++
Sbjct: 311 -----DY-----VEVDRIMDFARSTDDRGEPVTH-----YLVKWCSLPYEDSTWERRQDI 355
Query: 444 NXXXXXXXXXXXXXXXXXXXXXKPRARTKQKKTSITQLRNNQMKFIRQKPKLLSSDVELK 503
+ +P A +K S + +NN +L+
Sbjct: 356 DQAKIEEFEKLMSREPETERVERPPADDWKKSESSREYKNNN---------------KLR 400
Query: 504 DYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFL--AYLKQTHHNGPHLVVVPSST 561
+YQ G+NWL + N +CILADEMGLGKT Q I+FL YLK H GP LV+ P ST
Sbjct: 401 EYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIH--GPFLVIAPLST 458
Query: 562 LENWLREFNKFCPHLKVEPYYGSQQERAELR---DILEENEG-------QYDVIVTTYNL 611
+ NW REF + L V Y+GSQ R ++ ++ +G ++ I+TT+ +
Sbjct: 459 IPNWEREFRTW-TELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFEM 517
Query: 612 AAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKE 671
D LRN + VV DE H LKN + L ++ ++LLTGTPLQN ++E
Sbjct: 518 IL---TDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEE 574
Query: 672 LMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILRR 731
L SLL F+ P+ F S+ T F Q+ + L E +++ + ++KP +LRR
Sbjct: 575 LFSLLHFLEPSRFPSE-----TTFMQE---------FGDLKTEEQVQKLQAILKPMMLRR 620
Query: 732 KKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSK-- 789
K+ V K+L K I+ E+T +QK Y+ +++ K NV
Sbjct: 621 LKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSK-------GGGQANVPNLL 673
Query: 790 NLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFELH 849
N +M LRK HP Y NG E I E+ E H
Sbjct: 674 NTMMELRKCCNHP------------------------YLINGAEEKILEEFK-----ETH 704
Query: 850 KLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVL 909
+ P F+LQ+ +GK+ + +L K+ H +VL+FS + LDILE L
Sbjct: 705 N--AESPD---FQLQA-MIQAAGKLVLIDKLLPKLKAGGH-RVLIFSQMVRCLDILEDYL 757
Query: 910 STLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIP-VFLLSTKAGGFGINLVCANNVIIFDQ 968
+ R+DG+ + N RQ+ IDRF + D+ VFLL T+AGG GINL A+ IIFD
Sbjct: 758 IQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDS 817
Query: 969 SFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQEDKKNE 1028
+NP +D QA R HR+GQ+K V++ LI+R++ E ++ A KL LD + Q E
Sbjct: 818 DWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRE 877
Query: 1029 EA 1030
A
Sbjct: 878 NA 879
>CE03657 [R] KOG0383 Predicted helicase
Length = 1787
Score = 259 bits (662), Expect = 2e-68
Identities = 185/572 (32%), Positives = 269/572 (46%), Gaps = 95/572 (16%)
Query: 470 RTKQKKTSITQLRNNQMKFIRQKPKLLSSDVELKDYQQTGINWLHLLYQNDLSCILADEM 529
R K++K I + Q FI + + L YQ GINWL + N ILADEM
Sbjct: 590 RKKREKIDILKKYEVQPDFISE------TGGNLHPYQLEGINWLRHCWSNGTDAILADEM 643
Query: 530 GLGKTCQVISFL-AYLKQTHHNGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQER 588
GLGKT Q ++FL +K+ H GP L+ P ST+ NW RE +CP V Y G ++ R
Sbjct: 644 GLGKTVQSLTFLYTLMKEGHTKGPFLIAAPLSTIINWEREAELWCPDFYVVTYVGDRESR 703
Query: 589 AELRD------------------ILEENEGQYDVIVTTYNLAAGTKYDVSFLRNRNFDVV 630
+R+ I ++ V++T+Y D + L + ++ +
Sbjct: 704 MVIREHEFSFVDGAVRGGPKVSKIKTLENLKFHVLLTSYECI---NMDKAILSSIDWAAL 760
Query: 631 VYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDD 690
V DE H LKN+ S F L + N +R+LLTGTPLQNNL+EL LL F+ P+ F +
Sbjct: 761 VVDEAHRLKNNQSTFFKNLREYNIQYRVLLTGTPLQNNLEELFHLLNFLAPDRFNQLESF 820
Query: 691 LATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQVLKHLPRKHNHILHC 750
A ++ + E IE+ ++ P +LRR K VL +P K I+
Sbjct: 821 TAE--------------FSEISKEDQIEKLHNLLGPHMLRRLKADVLTGMPSKQELIVRV 866
Query: 751 EMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSKNLIMALRKASIHPLLFRHIYN 810
E++ +QK Y+ + + + G +M N+IM L+K HP LF
Sbjct: 867 ELSAMQKKYYKNILTRNFDALNVKNGGTQMSLI------NIIMELKKCCNHPYLFM---- 916
Query: 811 DXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFELHKLCCKFPSLYKFKLQSDEWM- 869
K C + P L + +
Sbjct: 917 ---------------------------------------KACLEAPKLKNGMYEGSALIK 937
Query: 870 NSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQ 929
N+GK L+ +L K+ D H +VL+FS T +LDILE K+ R+DG RQ
Sbjct: 938 NAGKFVLLQKMLRKLKDGGH-RVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQ 996
Query: 930 SLIDRFYEDDTIP-VFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQT 988
IDR+ VFLLST+AGG GINL A+ VII+D +NPH+D QA RAHR+GQ
Sbjct: 997 DAIDRYNAPGAKQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQK 1056
Query: 989 KEVQVTTLISRDTIEEKILHLAKNKLALDTHI 1020
+V + +++ ++EE+I +AK K+ L TH+
Sbjct: 1057 HKVMIYRFVTKGSVEERITSVAKKKMLL-THL 1087
>ECU01g0350 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1251
Score = 259 bits (661), Expect = 2e-68
Identities = 188/570 (32%), Positives = 292/570 (50%), Gaps = 46/570 (8%)
Query: 482 RNNQMKFIRQKPKLLSSDVELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFL 541
R N +K+ ++ + L++YQ G+NWL + SCI+ADEMGLGKT Q ++F+
Sbjct: 284 RENFIKY--EESPVFKGGNRLREYQLEGLNWLLNRWYYKQSCIMADEMGLGKTVQSVTFI 341
Query: 542 AYLKQTH-HNGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERA---ELRDILEE 597
L + + P LVV P S + +W REF + L+V Y+ ++ RA E +L++
Sbjct: 342 NTLFTKYDYCAPVLVVTPLSIIPHWEREFEAWTD-LRVLKYHENRPGRALIAEYEFVLKK 400
Query: 598 NEGQ---YDVIVTTYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINA 654
N + +DV++TTY+ + +S +F V ++DE H LKN+ S+ L +
Sbjct: 401 NNLEIRLFDVLITTYDTVMAEQEHLSQF---HFSVGIFDEAHRLKNAKSKAATILRTLKF 457
Query: 655 HFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAE 714
+ ++LL+GTPLQNN+ EL SLL FI P F S L FK +
Sbjct: 458 NHKVLLSGTPLQNNISELWSLLNFIDPMRFSSLPHFLGE-FKMENIND------------ 504
Query: 715 HAIERAKTMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKI 774
+E+ + +++P +LRR K+ V K +P K I+ +T +QK Y+ +++ +E
Sbjct: 505 --VEKLQGLLRPLMLRRMKEDVEKSIPTKEETIIEVALTMIQKRFYRAILEKNIEFL--- 559
Query: 775 KEGVKMEKASRNVSKNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIE 834
K K S N++M LRK IHP L + +I
Sbjct: 560 ---TKGGKESAPNLLNVMMELRKCCIHPYLIKGAEEQILSGYLKKKRERSKAEGAENDIT 616
Query: 835 YIKEDMSYMTDFELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLV 894
E ++ + + + YK +QS SGK+ L +L K+ D KVL+
Sbjct: 617 LTSEVLNEDEHQDGNSVISDIDEYYKIFIQS-----SGKLVLLDKLLGKLKD--GHKVLI 669
Query: 895 FSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDT-IPVFLLSTKAGGF 953
FS T+ LD+L L+ K+ R+DG + +RQ+ IDRF + + + VFLLST+AGG
Sbjct: 670 FSQMTRCLDLLAEYLAYRKYKYERIDGGARTENRQAAIDRFSDKTSDVFVFLLSTRAGGV 729
Query: 954 GINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNK 1013
GINL A+ VIIFD +NP +D QA R HR+GQT EV+V L++ +T E ++ A K
Sbjct: 730 GINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQTSEVKVYRLVTENTYEREMFDKAGLK 789
Query: 1014 LALDTHISQ----EDKKNEEALENKVTDLL 1039
L LD + Q E++K+E+ + + L
Sbjct: 790 LGLDRAVLQKMTFEEQKSEKTRKKDAIETL 819
>SPAC3G6.01 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1388
Score = 258 bits (660), Expect = 3e-68
Identities = 190/577 (32%), Positives = 293/577 (49%), Gaps = 77/577 (13%)
Query: 479 TQLRNNQMKF--IRQKPKLLSSDVELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQ 536
T N++ K+ + Q+P ++ EL+D+Q TG+NW+ L+ + + ILADEMGLGKT Q
Sbjct: 351 TNYGNSRPKYRKLEQQPSYITGG-ELRDFQLTGVNWMAYLWHKNENGILADEMGLGKTVQ 409
Query: 537 VISFLAYLKQT-HHNGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDIL 595
++FL+YL + +GP LVVVP ST+ W + + Y G+ R +RD
Sbjct: 410 TVAFLSYLAHSLRQHGPFLVVVPLSTVPAWQETLALWASDMNCISYLGNTTSRQVIRDYE 469
Query: 596 EENEG----QYDVIVTTYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMK 651
+G ++++++TTY D S L N + + DE H LKNS S + L +
Sbjct: 470 FYVDGTQKIKFNLLLTTYEYVLK---DRSVLSNIKWQYMAIDEAHRLKNSESSLYEALSQ 526
Query: 652 INAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPL 711
RLL+TGTPLQNN++EL +L++F+MP F +++ + + Y
Sbjct: 527 FKNSNRLLITGTPLQNNIRELAALVDFLMPGKFEIREE------INLEAPDEEQEAYIRS 580
Query: 712 LAEHAIERAKTMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHR 771
L EH ++P+ILRR K V K LP K IL E+++LQ Y K ++
Sbjct: 581 LQEH--------LQPYILRRLKKDVEKSLPSKSERILRVELSDLQMYWY----KNILTRN 628
Query: 772 RKIKEGVKMEKASRNVSKNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENG 831
++ + S+ N+++ L+KAS HP LF + E + +
Sbjct: 629 YRVLT-QSISSGSQISLLNIVVELKKASNHPYLFDGV---------------EESWMQKI 672
Query: 832 NIEYIKEDMSYMTDFELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEK 891
N + ++++ L L MNSGK+ L +L ++ H +
Sbjct: 673 NSQGRRDEV-------LKGLI----------------MNSGKMVLLDKLLSRLRRDGH-R 708
Query: 892 VLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIP-VFLLSTKA 950
VL+FS ++LDIL LS RLDG R++ ID F ++ VFLLST+A
Sbjct: 709 VLIFSQMVRMLDILGDYLSLRGYPHQRLDGTVPAAVRRTSIDHFNAPNSPDFVFLLSTRA 768
Query: 951 GGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLA 1010
GG GINL+ A+ VIIFD +NP D QA RAHR+GQ V V L+S+DTIEE +L A
Sbjct: 769 GGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLLSKDTIEEDVLERA 828
Query: 1011 KNKLALDTHI-------SQEDKKNEEALENKVTDLLE 1040
+ K+ L+ I Q++ KN++ +++ +L+
Sbjct: 829 RRKMILEYAIISLGVTDKQKNSKNDKFSAEELSAILK 865
>Hs4557447 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1709
Score = 258 bits (660), Expect = 3e-68
Identities = 189/553 (34%), Positives = 273/553 (49%), Gaps = 86/553 (15%)
Query: 487 KFIRQKPKLLS-----------SDVELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTC 535
K ++Q+P+ ++ +EL+DYQ G+NWL + SCILADEMGLGKT
Sbjct: 455 KVLKQRPRFVALKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTI 514
Query: 536 QVISFLAYLKQTHH-NGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDI 594
Q ISFL YL H GP L+VVP STL +W RE + + Y G R +R
Sbjct: 515 QTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTH 574
Query: 595 L----EENEGQYDVIVTTYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLM 650
+ ++++++TTY + K +FL N+ + DE H LKN S + L+
Sbjct: 575 EWTHHQTKRLKFNILLTTYEILLKDK---AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLI 631
Query: 651 KINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNP 710
++ RLL+TGTPLQN+LKEL SLL FIMP F S +D ++ + GY
Sbjct: 632 DFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWED------FEEEHGKGREYGYAS 685
Query: 711 LLAEHAIERAKTMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEH 770
L E ++PF+LRR K V K LP K IL EM+ LQK Y+ +
Sbjct: 686 LHKE---------LEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWIL------ 730
Query: 771 RRKIKEGVKMEKASRNVSKNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYEN 830
R K K K S + N++M L+K H L + N+ E+Y
Sbjct: 731 TRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNN--------------EFYNK 776
Query: 831 GNIEYIKEDMSYMTDFELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHE 890
+E + ++ +SGK+ L +L ++ + +
Sbjct: 777 ------QEALQHLI------------------------RSSGKLILLDKLLIRLRE-RGN 805
Query: 891 KVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIP-VFLLSTK 949
+VL+FS ++LDIL L F RLDG + R+ +D F + + FLLST+
Sbjct: 806 RVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTR 865
Query: 950 AGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHL 1009
AGG GINL A+ V+IFD +NP +D QA RAHR+GQ K+V + L+++ ++EE IL
Sbjct: 866 AGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILER 925
Query: 1010 AKNKLALDTHISQ 1022
AK K+ LD + Q
Sbjct: 926 AKKKMVLDHLVIQ 938
>Hs20533808 [R] KOG0383 Predicted helicase
Length = 1954
Score = 258 bits (660), Expect = 3e-68
Identities = 190/570 (33%), Positives = 281/570 (48%), Gaps = 89/570 (15%)
Query: 472 KQKKTSITQLRNNQMKFIRQKPKLLSSDVELKDYQQTGINWLHLLYQNDLSCILADEMGL 531
KQ+K T + + +KF +Q + S+ L YQ G+NWL + ILADEMGL
Sbjct: 670 KQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGL 729
Query: 532 GKTCQVISFLAYL-KQTHHNGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAE 590
GKT Q I FL L K+ H GP+LV P ST+ NW REF + P V Y G ++ R+
Sbjct: 730 GKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSV 789
Query: 591 LRD------------------ILEENEGQYDVIVTTYNLAAGTKYDVSFLRNRNFDVVVY 632
+R+ + +E + ++ V++T+Y L D + L + + +V
Sbjct: 790 IRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELIT---IDQAILGSIEWACLVV 846
Query: 633 DEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLA 692
DE H LKN+ S+ F L ++LLLTGTPLQNNL+EL LL F+ P F + + L
Sbjct: 847 DEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL- 905
Query: 693 TVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQVLKHLPRKHNHILHCEM 752
+ + + E I++ ++ P +LRR K V K++P K I+ E+
Sbjct: 906 -------------EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVEL 952
Query: 753 TELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVS-KNLIMALRKASIHPLLFRHIYND 811
+++QK Y+ + + E + + VS N++M L+K HP LF
Sbjct: 953 SQMQKKYYKFILTRNF-------EALNSKGGGNQVSLLNIMMDLKKCCNHPYLF------ 999
Query: 812 XXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFELHKLCCKFPSLYKFKLQSDEWMNS 871
E NG+ + SL K +S
Sbjct: 1000 -------PVAAVEAPVLPNGSYD--------------------GSSLVK---------SS 1023
Query: 872 GKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSL 931
GK+ L+ +L K+ D H +VL+FS T++LD+LE L K+ R+DG RQ
Sbjct: 1024 GKLMLLQKMLKKLRDEGH-RVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEA 1082
Query: 932 IDRFYEDDTIP-VFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKE 990
IDRF FLLST+AGG GINL A+ VII+D +NPH+D QA RAHR+GQ K+
Sbjct: 1083 IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKK 1142
Query: 991 VQVTTLISRDTIEEKILHLAKNKLALDTHI 1020
V + ++R ++EE+I +AK K+ L TH+
Sbjct: 1143 VMIYRFVTRASVEERITQVAKRKMML-THL 1171
>YER164w [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1468
Score = 257 bits (656), Expect = 8e-68
Identities = 186/546 (34%), Positives = 274/546 (50%), Gaps = 79/546 (14%)
Query: 501 ELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLK-QTHHNGPHLVVVPS 559
EL+D+Q TGINW+ L+ + ILADEMGLGKT Q ++F+++L NGPH++VVP
Sbjct: 375 ELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHIIVVPL 434
Query: 560 STLENWLREFNKFCPHLKVEPYYGSQQERAELRDI--------LEENEGQYDVIVTTYNL 611
ST+ WL F K+ P L Y G+Q+ R +R+ + +++V++TTY
Sbjct: 435 STMPAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFYTNPRAKGKKTMKFNVLLTTYEY 494
Query: 612 AAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKE 671
+ ++ ++ + + DE H LKN+ S + L R+L+TGTPLQNN+KE
Sbjct: 495 ILKDRAELGSIK---WQFMAVDEAHRLKNAESSLYESLNSFKVANRMLITGTPLQNNIKE 551
Query: 672 LMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILRR 731
L +L+ F+MP F T + D E I ++PFILRR
Sbjct: 552 LAALVNFLMPGRF--------------TIDQEIDFENQDEEQEEYIHDLHRRIQPFILRR 597
Query: 732 KKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSKNL 791
K V K LP K IL E++++Q Y+ + ++ + G K S N+
Sbjct: 598 LKKDVEKSLPSKTERILRVELSDVQTEYYKNIL---TKNYSALTAGAKGGHFS---LLNI 651
Query: 792 IMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFELHKL 851
+ L+KAS HP LF + E + G+ + +E++ L L
Sbjct: 652 MNELKKASNHPYLFDN--------------AEERVLQKFGDGKMTRENV-------LRGL 690
Query: 852 CCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLST 911
M+SGK+ L +L ++ H +VL+FS ++LDIL LS
Sbjct: 691 I----------------MSSGKMVLLDQLLTRLKKDGH-RVLIFSQMVRMLDILGDYLSI 733
Query: 912 LNIKFLRLDGQTQVNDRQSLIDRFYEDDTIP-VFLLSTKAGGFGINLVCANNVIIFDQSF 970
I F RLDG R+ ID F D+ VFLLST+AGG GINL+ A+ V+IFD +
Sbjct: 734 KGINFQRLDGTVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVVIFDSDW 793
Query: 971 NPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALD--------THISQ 1022
NP D QA RAHR+GQ V V L+S+DT+EE++L A+ K+ L+ T ++
Sbjct: 794 NPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIISLGVTDGNK 853
Query: 1023 EDKKNE 1028
KKNE
Sbjct: 854 YTKKNE 859
>CE11572 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1465
Score = 257 bits (656), Expect = 8e-68
Identities = 196/592 (33%), Positives = 292/592 (49%), Gaps = 87/592 (14%)
Query: 470 RTKQKKTSITQLRNNQMKFIRQKPKLLSSDVE----LKDYQQTGINWLHLLYQNDLSCIL 525
++ K +++ + R KF P L +D E L+DYQ G+NW+ + S IL
Sbjct: 370 KSPNKNSNVLRKRPKFEKF-ESMPDFLKTDGESTHKLRDYQLEGLNWMVYAWCKGNSSIL 428
Query: 526 ADEMGLGKTCQVISFLAYLKQTHH-NGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGS 584
ADEMGLGKT Q IS LA L + GP+LVVVP ST+ W +EF ++ P + + Y G
Sbjct: 429 ADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMAAWQKEFAQWAPEMNLVVYMGD 488
Query: 585 QQERAELRD----ILEENEGQYDVIVTTYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKN 640
R +R + + + + I+TTY + K +FL + ++ ++ DE H LKN
Sbjct: 489 VVSRDMIRQYEWFVGGTKKMKINAILTTYEILLKDK---AFLSSIDWAALLVDEAHRLKN 545
Query: 641 SMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTR 700
S + L + + +LL+TGTPLQN+LKEL +LL FIMP F D F+
Sbjct: 546 DESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMPEKF-----DCWEEFE---- 596
Query: 701 TSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLY 760
T+ + + + A H ++PF+LRR K V K LP K IL +MT QK Y
Sbjct: 597 TAHNESNHKGISALH------KKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTAHQKQFY 650
Query: 761 QQEIKQVMEHRRKIKEGVKMEKASRNVSKNLIMALRKASIHPLLFR---HIYNDXXXXXX 817
+ + ++ R++ +GV K S N NL+M L+K H L R HIY+D
Sbjct: 651 KWIL---TKNYRELSKGV---KGSINGFVNLVMELKKCCNHASLTRQYDHIYDDA----- 699
Query: 818 XXXXXXEPEYYENGNIEYIKEDMSYMTDFELHKLCCKFPSLYKFKLQSDEWMNSGKVEQL 877
G ++ + + +SGK+ L
Sbjct: 700 ------------QGRLQQLLK-------------------------------SSGKLILL 716
Query: 878 KSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRF-Y 936
+L ++ D H +VL+FS +LDIL+ L RLDG + + R+ +D +
Sbjct: 717 DKLLCRLKDKGH-RVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNA 775
Query: 937 EDDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTL 996
T FLLST+AGG GINL A+ VIIFD +NP +D QA RAHR+GQTK V + L
Sbjct: 776 PGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRL 835
Query: 997 ISRDTIEEKILHLAKNKLALDTHISQEDKKNEEALENKVTDLLEDIIFDENQ 1048
+++ ++EE+I+ AK KL LD + Q + + +K + FD+ +
Sbjct: 836 VTKGSVEEEIVERAKRKLVLDHLVIQRMDTTGKTVLSKNATASGSVPFDKQE 887
>At2g13370 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1738
Score = 257 bits (656), Expect = 8e-68
Identities = 189/556 (33%), Positives = 293/556 (51%), Gaps = 79/556 (14%)
Query: 502 LKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHH-NGPHLVVVPSS 560
L+DYQ G+N+L + ND + ILADEMGLGKT Q +S L +L+ T GP LVVVP S
Sbjct: 641 LRDYQLEGLNFLVNSWLNDTNVILADEMGLGKTVQSVSMLGFLQNTQQIPGPFLVVVPLS 700
Query: 561 TLENWLREFNKFCPHLKVEPYYG---SQQERAELRDILEENEG-QYDVIVTTYNLAAGTK 616
TL NW +EF K+ P + + Y G S++ R + D+ + +++ ++TTY + K
Sbjct: 701 TLANWAKEFRKWLPGMNIIVYVGTRASREVRNKTNDVHKVGRPIKFNALLTTYEVVLKDK 760
Query: 617 YDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLL 676
+S ++ + ++ DE H LKNS ++ + L++ + +LL+TGTPLQN+++EL +LL
Sbjct: 761 AVLSKIK---WIYLMVDEAHRLKNSEAQLYTALLEFSTKNKLLITGTPLQNSVEELWALL 817
Query: 677 EFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQV 736
F+ P F KD+ +K + ++++ LA +E ++P ILRR V
Sbjct: 818 HFLDPGKF-KNKDEFVENYKNLSSFNESE------LANLHLE-----LRPHILRRVIKDV 865
Query: 737 LKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHR-RKIKEGVKMEKASRNVSKNLIMAL 795
K LP K IL EM+ LQK Y K ++E + +GV+ + S N+++ L
Sbjct: 866 EKSLPPKIERILRVEMSPLQKQYY----KWILERNFHDLNKGVRGNQVS---LLNIVVEL 918
Query: 796 RKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFELHKLCCKF 855
+K HP LF ++ G+I + +L K+
Sbjct: 919 KKCCNHPFLFE-----------------SADHGYGGDIN---------DNSKLDKII--- 949
Query: 856 PSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIK 915
++SGK+ L +L ++ + +H +VL+FS ++LDIL LS +
Sbjct: 950 -------------LSSGKLVILDKLLVRLRETKH-RVLIFSQMVRMLDILAEYLSLRGFQ 995
Query: 916 FLRLDGQTQVNDRQSLIDRF---YEDDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNP 972
F RLDG T+ RQ +D F DD FLLST+AGG GINL A+ V+IFD +NP
Sbjct: 996 FQRLDGSTKAELRQQAMDHFNAPASDDF--CFLLSTRAGGLGINLATADTVVIFDSDWNP 1053
Query: 973 HDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQEDKKNEEALE 1032
+D QA RAHR+GQ + V + ++ ++EE+IL AK K+ LD H+ + E LE
Sbjct: 1054 QNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEEILERAKRKMVLD-HLVIQKLNAEGRLE 1112
Query: 1033 NKVTDLLEDIIFDENQ 1048
+ T + FD+N+
Sbjct: 1113 KRETK--KGSNFDKNE 1126
>Hs21362042 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 2713
Score = 256 bits (653), Expect = 2e-67
Identities = 183/544 (33%), Positives = 279/544 (50%), Gaps = 70/544 (12%)
Query: 491 QKPKLLSSDVELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHHN 550
+K + + +L++YQ G+NWL + N +CILADEMGLGKT Q I+FL+ + +
Sbjct: 448 EKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLRGIH 507
Query: 551 GPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRD---ILEENEG------- 600
GP L++ P ST+ NW REF + + Y+GSQ R ++ + + +G
Sbjct: 508 GPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGVF 566
Query: 601 QYDVIVTTYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLL 660
++ V++TT+ + D L+ ++ V+ DE H LKN + L + ++LL
Sbjct: 567 KFHVVITTFEMILA---DCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLL 623
Query: 661 TGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERA 720
TGTPLQN+++EL SLL F+ P+ F S+ T F ++ + L E +++
Sbjct: 624 TGTPLQNSVEELFSLLNFLEPSQFPSE-----TAFLEE---------FGDLKTEEQVKKL 669
Query: 721 KTMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKM 780
++++KP +LRR KD V K+L K I+ E+T +QK Y+ +++ K G
Sbjct: 670 QSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLTK---GANQ 726
Query: 781 EKASRNVSKNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDM 840
+ N +M LRK HP L NG E I ED
Sbjct: 727 HNMPNLI--NTMMELRKCCNHPYLI------------------------NGAEEKILEDF 760
Query: 841 SYMTDFELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQ 900
+ H P F+LQ+ +GK+ + +L K+I H KVL+FS +
Sbjct: 761 R-----KTHS-----PDAPDFQLQA-MIQAAGKLVLIDKLLPKLIAGGH-KVLIFSQMVR 808
Query: 901 VLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIP-VFLLSTKAGGFGINLVC 959
LDILE L + R+DG+ + N RQ+ IDRF + D+ VFLL T+AGG GINL
Sbjct: 809 CLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTA 868
Query: 960 ANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTH 1019
A+ IIFD +NP +D QA R HR+GQ+K V+V LI+R++ E ++ A KL LD
Sbjct: 869 ADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKA 928
Query: 1020 ISQE 1023
+ Q+
Sbjct: 929 VLQD 932
>7293795 [R] KOG0383 Predicted helicase
Length = 883
Score = 255 bits (651), Expect = 3e-67
Identities = 190/553 (34%), Positives = 281/553 (50%), Gaps = 90/553 (16%)
Query: 487 KFIRQKPKLLSSDVELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYL-K 545
K+ Q L + ++L +Q G++WL + + ILADEMGLGKT Q + FL L K
Sbjct: 252 KYEDQPVFLKEAGLKLHPFQIEGVSWLRYSWGQGIPTILADEMGLGKTIQTVVFLYSLFK 311
Query: 546 QTHHNGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRD-----------I 594
+ H GP L+ VP STL NW RE + P L Y G + RA +R
Sbjct: 312 EGHCRGPFLISVPLSTLTNWERELELWAPELYCVTYVGGKTARAVIRKHEISFEEVTTKT 371
Query: 595 LEENEGQY--DVIVTTYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKI 652
+ EN+ QY +V++T+Y + D +FL ++ +V DE H L+++ S+ F L K
Sbjct: 372 MRENQTQYKFNVMLTSYEFIS---VDAAFLGCIDWAALVVDEAHRLRSNQSKFFRILSKY 428
Query: 653 NAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLL 712
++LLLTGTPLQNNL+EL LL F+ F +DL T + T S
Sbjct: 429 RIGYKLLLTGTPLQNNLEELFHLLNFLSSGKF----NDLQTFQAEFTDVS---------- 474
Query: 713 AEHAIERAKTMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRR 772
E ++R +++P +LRR K VLK +P K I+ E++ +QK Y+ +
Sbjct: 475 KEEQVKRLHEILEPHMLRRLKADVLKSMPPKSEFIVRVELSSMQKKFYKHIL-------T 527
Query: 773 KIKEGVKMEKASRNVS-KNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENG 831
K + + + R S N++M LRK HP LF P E
Sbjct: 528 KNFKALNQKGGGRVCSLLNIMMDLRKCCNHPYLF-------------------PSAAEEA 568
Query: 832 NIEYIKEDMSYMTDFELHKLCCKFPS-LYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHE 890
I PS LY+ S SGK++ L +L K + +
Sbjct: 569 TIS---------------------PSGLYE---MSSLTKASGKLDLLSKML-KQLKADNH 603
Query: 891 KVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIP---VFLLS 947
+VL+FS T++L++LE L ++ R+DG + + RQ IDRF +D + VFLLS
Sbjct: 604 RVLLFSQMTKMLNVLEHFLEGEGYQYDRIDGSIKGDLRQKAIDRF--NDPVSEHFVFLLS 661
Query: 948 TKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKIL 1007
T+AGG GINL A+ VIIFD +NPH+D QA RAHR+GQ K+V + ++ +++EE+I+
Sbjct: 662 TRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAHRMGQKKKVMIYRFVTHNSVEERIM 721
Query: 1008 HLAKNKLALDTHI 1020
+AK+K+ L TH+
Sbjct: 722 QVAKHKMML-THL 733
>Hs22047966 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1953
Score = 254 bits (650), Expect = 4e-67
Identities = 182/533 (34%), Positives = 272/533 (50%), Gaps = 70/533 (13%)
Query: 501 ELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHHNGPHLVVVPSS 560
+L++YQ G+NWL + N +CILADEMGLGKT Q I+FL + +GP LV+ P S
Sbjct: 182 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLS 241
Query: 561 TLENWLREFNKFCPHLKVEPYYGSQQERAELRDI---LEENEGQ-------YDVIVTTYN 610
T+ NW REFN + + Y+GS R ++ +++ G+ +D ++TT+
Sbjct: 242 TITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFE 300
Query: 611 LAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLK 670
+ D LR + V+ DE H LKN + + L ++ ++LLTGTPLQN ++
Sbjct: 301 MILS---DCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVE 357
Query: 671 ELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILR 730
EL SLL F+ P+ F S+ + L K + L E +++ + ++KP +LR
Sbjct: 358 ELFSLLHFLEPSQFPSESEFL--------------KDFGDLKTEEQVQKLQAILKPMMLR 403
Query: 731 RKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSKN 790
R K+ V K+L K I+ E+T +QK Y+ +++ K M N
Sbjct: 404 RLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTNMPNLL-----N 458
Query: 791 LIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFELHK 850
+M LRK HP L NG E I +T+F +
Sbjct: 459 TMMELRKCCNHPYLI------------------------NGAEEKI------LTEFR--E 486
Query: 851 LCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLS 910
C P + F LQ+ ++GK+ + +L K+ H KVL+FS + LDILE L
Sbjct: 487 ACHIIP--HDFHLQAMV-RSAGKLVLIDKLLPKLKAGGH-KVLIFSQMVRCLDILEDYLI 542
Query: 911 TLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIP-VFLLSTKAGGFGINLVCANNVIIFDQS 969
+ R+DG+ + N RQ+ IDRF + D+ VFLL T+AGG GINL A+ IIFD
Sbjct: 543 QRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSD 602
Query: 970 FNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQ 1022
+NP +D QA R HR+GQ+K V+V LI+R++ E ++ A KL LD + Q
Sbjct: 603 WNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQ 655
>At2g25170 [R] KOG0383 Predicted helicase
Length = 1359
Score = 253 bits (646), Expect = 1e-66
Identities = 181/562 (32%), Positives = 283/562 (50%), Gaps = 97/562 (17%)
Query: 502 LKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHHNGPHLVVVPSST 561
L YQ G+N+L + ILADEMGLGKT Q I+ LA L + + PHLV+ P ST
Sbjct: 273 LHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIALLASLFEENLI-PHLVIAPLST 331
Query: 562 LENWLREFNKFCPHLKVEPYYGSQQERAELRD-----------ILEENEGQ--------- 601
L NW REF + P + V Y+G+ Q RA +R+ I ++ GQ
Sbjct: 332 LRNWEREFATWAPQMNVVMYFGTAQARAVIREHEFYLSKDQKKIKKKKSGQISSESKQKR 391
Query: 602 --YDVIVTTYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLL 659
+DV++T+Y + D + L+ ++ ++ DEGH LKN S+ F+ L + +++ R+L
Sbjct: 392 IKFDVLLTSYEMI---NLDSAVLKPIKWECMIVDEGHRLKNKDSKLFSSLTQYSSNHRIL 448
Query: 660 LTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIER 719
LTGTPLQNNL EL L+ F+ F S ++ F+++ + + E I R
Sbjct: 449 LTGTPLQNNLDELFMLMHFLDAGKFGSLEE-----FQEE---------FKDINQEEQISR 494
Query: 720 AKTMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVK 779
M+ P +LRR K V+K +P K IL +++ LQK Y+ + + V
Sbjct: 495 LHKMLAPHLLRRVKKDVMKDMPPKKELILRVDLSSLQKEYYKAIFTRNYQ--------VL 546
Query: 780 MEKASRNVS-KNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKE 838
+K +S N++M LRK HP + + EP ++
Sbjct: 547 TKKGGAQISLNNIMMELRKVCCHPYMLEGV---------------EPVIHDAN------- 584
Query: 839 DMSYMTDFELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLF 898
+K L+S GK++ L ++ K+ + Q +VL+++ F
Sbjct: 585 ------------------EAFKQLLES-----CGKLQLLDKMMVKLKE-QGHRVLIYTQF 620
Query: 899 TQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIP-VFLLSTKAGGFGINL 957
+LD+LE + ++ R+DG+ +RQ IDRF ++ FLLST+AGG GINL
Sbjct: 621 QHMLDLLEDYCTHKKWQYERIDGKVGGAERQIRIDRFNAKNSNKFCFLLSTRAGGLGINL 680
Query: 958 VCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALD 1017
A+ VII+D +NPH D QA RAHR+GQT +V + LI+R TIEE+++ L K K+ L+
Sbjct: 681 ATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRLINRGTIEERMMQLTKKKMVLE 740
Query: 1018 THISQEDKKNEEALENKVTDLL 1039
H+ K + + ++ D++
Sbjct: 741 -HLVVGKLKTQNINQEELDDII 761
>CE17716 [R] KOG0383 Predicted helicase
Length = 1829
Score = 251 bits (642), Expect = 3e-66
Identities = 184/592 (31%), Positives = 277/592 (46%), Gaps = 90/592 (15%)
Query: 472 KQKKTSITQLRNNQMKFIRQKPKLLSSDVELKDYQQTGINWLHLLYQNDLSCILADEMGL 531
K+KK +R K+ Q + + +L YQ G+NWL + N ILADEMGL
Sbjct: 575 KKKKREKIDIRK---KYEVQPDYVTETGGKLHPYQLEGLNWLRHCWSNGTDAILADEMGL 631
Query: 532 GKTCQVISFL-AYLKQTHHNGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAE 590
GKT Q ++FL + +K+ H GP L+ P ST+ NW RE ++CP V Y G + R
Sbjct: 632 GKTVQSLTFLYSLMKEGHCKGPFLIAAPLSTIINWEREAEQWCPDFYVVTYVGLRDARVV 691
Query: 591 LRD------------------ILEENEGQYDVIVTTYNLAAGTKYDVSFLRNRNFDVVVY 632
LR+ + ++ V++T+Y D + L + + +V
Sbjct: 692 LREHEFSFVEGAVRSGPKASKMKTTENMKFHVLLTSYETI---NMDKTILSSIEWGALVV 748
Query: 633 DEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLA 692
DE H LKN+ S F L + H+R+LLTGTPLQNNL+EL LL F+ F + A
Sbjct: 749 DEAHRLKNNQSLFFKNLNEYTIHYRVLLTGTPLQNNLEELFHLLNFLSKERFNQLEAFTA 808
Query: 693 TVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQVLKHLPRKHNHILHCEM 752
+N + E IE+ ++ P +LRR K VL +P K I+ E+
Sbjct: 809 E--------------FNEISKEDQIEKLHNLLGPHMLRRLKADVLTGMPSKSELIVRVEL 854
Query: 753 TELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSKNLIMALRKASIHPLLFRHIYNDX 812
+ +QK Y+ + + + G +M N++M L+K HP LF
Sbjct: 855 SAMQKKWYKNILTRNFDALNVKNGGTQMS------LMNVLMELKKCCNHPYLF------- 901
Query: 813 XXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFELHKLCCKFPSLYKFKLQSDEWMNSG 872
+E KE L K NSG
Sbjct: 902 ----------------VKAELEAPKEKNGMYEGTALIK-------------------NSG 926
Query: 873 KVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLI 932
K L+ +L K+ D H +VL+FS T++LDI+E + ++ R+DG RQ I
Sbjct: 927 KFVLLQKMLRKLKDGGH-RVLIFSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAI 985
Query: 933 DRFYEDDTIP-VFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEV 991
DR+ +FLLST+AGG GINL A+ VII+D +NPH+D QA RAHR+GQ +V
Sbjct: 986 DRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKV 1045
Query: 992 QVTTLISRDTIEEKILHLAKNKLALDTHISQEDKKNEEALENKVTDLLEDII 1043
+ +++ ++EEKI +AK K+ L+ + + +E T+ L+D++
Sbjct: 1046 MIYRFVTKKSVEEKITSVAKKKMLLNHLVVRAGLGGKEGKTMSKTE-LDDVL 1096
>At2g28290 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1339
Score = 251 bits (640), Expect = 5e-66
Identities = 188/564 (33%), Positives = 285/564 (50%), Gaps = 96/564 (17%)
Query: 489 IRQKPKLLSSDVELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQ--------VISF 540
I ++P L +L++YQ G+ WL LY N L+ ILADEMGLGKT Q VIS
Sbjct: 781 INEQPSSLVGG-KLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQMGLGKTVQVISL 839
Query: 541 LAYLKQTHHN-GPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAEL--RDILEE 597
+ YL +T ++ GP LVVVPSS L W E N + P + Y G+ ER +L I+ +
Sbjct: 840 ICYLMETKNDRGPFLVVVPSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKEQIVHQ 899
Query: 598 NEGQYDVIVTTYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFR 657
+++V++TTY K+D L ++ ++ DEGH +KN+ + L + R
Sbjct: 900 ---KFNVLLTTYEYLMN-KHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSHR 955
Query: 658 LLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEH-- 715
LLLTGTPLQNNL+EL +LL F++PN+F + +D + F + +++ + LL+E
Sbjct: 956 LLLTGTPLQNNLEELWALLNFLLPNIF-NSSEDFSQWFNKPFQSNGES---SALLSEEEN 1011
Query: 716 --AIERAKTMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRK 773
I R +++PF+LRR K +V LP K ++ CE + QK L +K+V ++
Sbjct: 1012 LLIINRLHQVLRPFVLRRLKHKVENELPEKIERLIRCEASAYQKLL----MKRVEDNLGS 1067
Query: 774 IKEGVKMEKASRNVSKNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNI 833
I A N +M LR HP L
Sbjct: 1068 I------GNAKSRAVHNSVMELRNICNHPYL----------------------------- 1092
Query: 834 EYIKEDMSYMTDFELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVL 893
+ + ++ + +LC K L + + +LK+ H +VL
Sbjct: 1093 SQLHSEEHFLP--PIVRLCGKLEMLDRM------------LPKLKATDH--------RVL 1130
Query: 894 VFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDT-IPVFLLSTKAGG 952
FS T++LD++E L+ K+LRLDGQT DR +LID F + + +FLLS +AGG
Sbjct: 1131 FFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAGG 1190
Query: 953 FGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKN 1012
G+NL A+ VI+FD +NP D QA RAHR+GQ K+V V + +++EE++ A++
Sbjct: 1191 VGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFETVNSVEEQVRASAEH 1250
Query: 1013 KLAL----------DTHISQEDKK 1026
KL + D + S ED+K
Sbjct: 1251 KLGVANQSITAGFFDNNTSAEDRK 1274
>YPL082c [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1867
Score = 250 bits (639), Expect = 7e-66
Identities = 180/569 (31%), Positives = 285/569 (49%), Gaps = 69/569 (12%)
Query: 502 LKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLA---YLKQTHHNG------- 551
L+ YQQ G+NWL L + L IL D+MGLGKT Q I +A YL++ +
Sbjct: 1272 LRKYQQDGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIIASDQYLRKEDYEKTRSVESR 1331
Query: 552 --PHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQYDVIVTTY 609
P L++ P S +W EF+++ P LKV Y G R LR L + D+IVT+Y
Sbjct: 1332 ALPSLIICPPSLTGHWENEFDQYAPFLKVVVYAGGPTVRLTLRPQLSDA----DIIVTSY 1387
Query: 610 NLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNL 669
++A + D++ L ++ V DEGH++KNS S+ + +I A+ RL+LTGTP+QNN+
Sbjct: 1388 DVA---RNDLAVLNKTEYNYCVLDEGHIIKNSQSKLAKAVKEITANHRLILTGTPIQNNV 1444
Query: 670 KELMSLLEFIMPNLFVSKK-------DDLATVFKQKTRTSDADKGYNPLLAEHAIERAKT 722
EL SL +F+MP ++K +A KT + + + G L A H
Sbjct: 1445 LELWSLFDFLMPGFLGTEKMFQERFAKPIAASRNSKTSSKEQEAGVLALEALH------K 1498
Query: 723 MMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEK 782
+ PF+LRR K+ VL LP K +CE+ +LQK LY K+ K E ++
Sbjct: 1499 QVLPFMLRRLKEDVLSDLPPKIIQDYYCELGDLQKQLYMDFTKKQKNVVEKDIENSEIAD 1558
Query: 783 ASRNVSKNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNI-EYIKEDMS 841
+++ + L +RK HP L P + + + +Y+K+
Sbjct: 1559 GKQHIFQAL-QYMRKLCNHPAL-----------------VLSPNHPQLAQVQDYLKQ--- 1597
Query: 842 YMTDFELH------KLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVF 895
T +LH KL L++ + ++ +Q + + I + L+F
Sbjct: 1598 --TGLDLHDIINAPKLSALRTLLFECGIGEEDIDKKASQDQNFPIQNV---ISQHRALIF 1652
Query: 896 SLFTQVLDILE---FVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKAGG 952
+LD++E F ++ ++RLDG DRQ ++ +F ED +I LL+TK GG
Sbjct: 1653 CQLKDMLDMVENDLFKKYMPSVTYMRLDGSIDPRDRQKVVRKFNEDPSIDCLLLTTKVGG 1712
Query: 953 FGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKN 1012
G+NL A+ VI + +NP +D QA DRAHR+GQ K V V +I++ T+EEKI+ L K
Sbjct: 1713 LGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRIGQKKVVNVYRIITKGTLEEKIMGLQKF 1772
Query: 1013 KLAL-DTHISQEDKKNEEALENKVTDLLE 1040
K+ + T ++Q++ +++ DL +
Sbjct: 1773 KMNIASTVVNQQNSGLASMDTHQLLDLFD 1801
>Hs21071046 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1033
Score = 248 bits (633), Expect = 4e-65
Identities = 183/541 (33%), Positives = 271/541 (49%), Gaps = 110/541 (20%)
Query: 502 LKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHHNGPHLVVVPSST 561
L+DYQ G+NWL LY+N ++ ILADE+ GPH+V+VP ST
Sbjct: 183 LRDYQIRGLNWLISLYENGVNGILADEIP--------------------GPHMVLVPKST 222
Query: 562 LENWLREFNKFCPHLKVEPYYGSQQERAE-LRDILEENEGQYDVIVTTYNLAAGTKYDVS 620
L NW+ EF ++ P L+V + G + RA +RD E G++DV VT+Y + K S
Sbjct: 223 LHNWMNEFKRWVPSLRVICFVGDKDARAAFIRD--EMMPGEWDVCVTSYEMVIKEK---S 277
Query: 621 FLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIM 680
+ ++ +V DE H +KN S+ + + + RLLLTGTPLQNNL EL +LL F++
Sbjct: 278 VFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLL 337
Query: 681 PNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQVLKHL 740
P++F + DD + F K D + +ER ++KPF+LRR K V K L
Sbjct: 338 PDVF-NSADDFDSWFDTKNCLGD----------QKLVERLHAVLKPFLLRRIKTDVEKSL 386
Query: 741 PRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSKNLIMALRKASI 800
P K ++ ++++Q+ Y K +M+ + KM+K N++M LRK
Sbjct: 387 PPKKEIKIYLGLSKMQREWY---TKILMKDIDVLNSSGKMDKMR---LLNILMQLRKCCN 440
Query: 801 HPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFELHKLCCKFPSLYK 860
HP LF EP Y TD +
Sbjct: 441 HPYLF---------------DGAEP-------------GPPYTTDEHIVS---------- 462
Query: 861 FKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLD 920
NSGK+ L +L K+ + Q +VL+FS T++LDILE ++ RLD
Sbjct: 463 ---------NSGKMVVLDKLLAKLKE-QGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLD 512
Query: 921 GQTQVNDRQSLIDRFYEDDTIP----------------VFLLSTKAGGFGINLVCANNVI 964
GQT +R+ D+F E + + +F+LST+AGG GINL A+ VI
Sbjct: 513 GQTPHEERE---DKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVI 569
Query: 965 IFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQED 1024
++D +NP D QA DRAHR+GQ K V+V LI+ +T+EE+I+ A+ KL LD+ + Q+
Sbjct: 570 LYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQG 629
Query: 1025 K 1025
+
Sbjct: 630 R 630
>Hs4557451 [R] KOG0383 Predicted helicase
Length = 1944
Score = 244 bits (624), Expect = 4e-64
Identities = 194/617 (31%), Positives = 289/617 (46%), Gaps = 102/617 (16%)
Query: 466 KPRARTKQKKT------SITQLRNNQMKFIRQKPKLLSSDVELKDYQQTGINWLHLLYQN 519
+PR K+KK + + +K+ Q + ++ L YQ G+NWL +
Sbjct: 694 QPRKYKKKKKELQGDGPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQ 753
Query: 520 DLSCILADEMGLGKTCQVISFLAYL-KQTHHNGPHLVVVPSSTLENWLREFNKFCPHLKV 578
ILADEMGLGKT Q I FL L K+ H GP LV P ST+ NW REF + P V
Sbjct: 754 GTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYV 813
Query: 579 EPYYGSQQERAELRD------------------ILEENEGQYDVIVTTYNLAAGTKYDVS 620
Y G + RA +R+ + E + ++ V++T+Y L D +
Sbjct: 814 VTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELIT---IDQA 870
Query: 621 FLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIM 680
L + + +V DE H LKN+ S+ F L +LLLTGTPLQNNL+EL LL F+
Sbjct: 871 ALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLT 930
Query: 681 PNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQVLKHL 740
P F + + L + + + E I++ ++ P +LRR K V K++
Sbjct: 931 PERFNNLEGFL--------------EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNM 976
Query: 741 PRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVS-KNLIMALRKAS 799
P K I+ E++ +QK Y+ + + E + VS N++M L+K
Sbjct: 977 PAKTELIVRVELSPMQKKYYKYILTRNF-------EALNSRGGGNQVSLLNIMMDLKKCC 1029
Query: 800 IHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFELHKLCCKFPSLY 859
HP LF YE G + IK
Sbjct: 1030 NHPYLF--------PVAAMESPKLPSGAYEGGAL--IK---------------------- 1057
Query: 860 KFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRL 919
+SGK+ L+ +L K+ + Q +VL+FS T++LD+LE L K+ R+
Sbjct: 1058 ----------SSGKLMLLQKMLRKLKE-QGHRVLIFSQMTKMLDLLEDFLDYEGYKYERI 1106
Query: 920 DGQTQVNDRQSLIDRFYEDDTIP-VFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQA 978
DG RQ IDRF FLLST+AGG GINL A+ VIIFD +NPH+D QA
Sbjct: 1107 DGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQA 1166
Query: 979 ADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHI-------SQEDKKNEEAL 1031
RAHR+GQ +V + ++R ++EE+I +AK K+ L TH+ S+ +++ L
Sbjct: 1167 FSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMML-THLVVRPGLGSKAGSMSKQEL 1225
Query: 1032 ENKVTDLLEDIIFDENQ 1048
++ + E++ DEN+
Sbjct: 1226 DDILKFGTEELFKDENE 1242
>Hs4557453 [R] KOG0383 Predicted helicase
Length = 1912
Score = 244 bits (622), Expect = 7e-64
Identities = 182/556 (32%), Positives = 265/556 (46%), Gaps = 89/556 (16%)
Query: 486 MKFIRQKPKLLSSDVELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYL- 544
+K+ RQ L ++ L YQ G+NWL + ILADEMGLGKT Q FL L
Sbjct: 710 VKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLY 769
Query: 545 KQTHHNGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRD----------- 593
K+ H GP LV P ST+ NW REF + P + V Y G + RA +R+
Sbjct: 770 KEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIR 829
Query: 594 -------ILEENEGQYDVIVTTYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERF 646
+ +E ++ V++T+Y L D++ L + ++ ++ DE H LKN+ S+ F
Sbjct: 830 GGKKASRMKKEASVKFHVLLTSYELIT---IDMAILGSIDWACLIVDEAHRLKNNQSKFF 886
Query: 647 NKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADK 706
L + +LLLTGTPLQNNL+EL LL F+ P F + + L +
Sbjct: 887 RVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL--------------E 932
Query: 707 GYNPLLAEHAIERAKTMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQ 766
+ + E I++ M+ P +LRR K V K++P K I+ E++ +QK Y+ + +
Sbjct: 933 EFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTR 992
Query: 767 VMEHRRKIKEGVKMEKASRNVS-KNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEP 825
E + VS N++M L+K HP LF E
Sbjct: 993 NF-------EALNARGGGNQVSLLNVVMDLKKCCNHPYLF-------------PVAAMEA 1032
Query: 826 EYYENGNIEYIKEDMSYMTDFELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKII 885
NG + L + K L K ++ LK H++
Sbjct: 1033 PKMPNGMYD----------GSALIRASGKLLLLQKM------------LKNLKEGGHRV- 1069
Query: 886 DIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIP-VF 944
L+FS T++LD+LE L K+ R+DG N RQ IDRF F
Sbjct: 1070 -------LIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCF 1122
Query: 945 LLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEE 1004
LLST+AGG GINL A+ VII+D +NPH+D QA RAHR+GQ K+V + ++R ++EE
Sbjct: 1123 LLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEE 1182
Query: 1005 KILHLAKNKLALDTHI 1020
+I +AK K+ L TH+
Sbjct: 1183 RITQVAKKKMML-THL 1197
>At2g46020 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1245
Score = 243 bits (620), Expect = 1e-63
Identities = 181/549 (32%), Positives = 279/549 (49%), Gaps = 77/549 (14%)
Query: 491 QKPKLLSSDVELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHHN 550
++P +L + L+DYQ G+ W+ LY N L+ ILADEMGLGKT QV++ +AYL + N
Sbjct: 24 RQPSMLQAGT-LRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGN 82
Query: 551 -GPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQYDVIVTTY 609
GPHL++VP++ L NW E + + P + Y G++ +R++L + +++V+VTTY
Sbjct: 83 YGPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKL--FSQVKFEKFNVLVTTY 140
Query: 610 NLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNL 669
YD S L ++ ++ DE +K+ S L + RLLLTGTPLQN+L
Sbjct: 141 EF---IMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDL 197
Query: 670 KELMSLLEFIMPNLFVSKK---DDLATVFKQKTRTSDADKGYNPLLAEH---AIERAKTM 723
KEL SLL ++P++F ++K D A F+++ + + + L E I R +
Sbjct: 198 KELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDW--LETEKKVIVIHRLHQI 255
Query: 724 MKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQ-------QEIKQVMEHRRKIKE 776
++PF+LRR+ + V LP K + +L C M+ +Q +Y + E R K
Sbjct: 256 LEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPDDEKLRAQKN 315
Query: 777 GVKMEKASRNVSKNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYI 836
+ K R ++ N M LRKA HPLL +ND
Sbjct: 316 PIYQAKIYRTLN-NRCMELRKACNHPLLNYPYFND------------------------- 349
Query: 837 KEDMSYMTDFELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFS 896
+ DF L + C GK+ L +L K+ H +VL+FS
Sbjct: 350 -----FSKDF-LVRSC-------------------GKLWILDRILIKLQRTGH-RVLLFS 383
Query: 897 LFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDT-IPVFLLSTKAGGFGI 955
T++LDILE L + + R+DG T + DR+S I F + DT +FLLS +A G G+
Sbjct: 384 TMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDTDCFIFLLSIRAAGRGL 443
Query: 956 NLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLA 1015
NL A+ V+I+D NP ++ QA RAHR+GQT+EV+V + +E+ H +++L
Sbjct: 444 NLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKV--IYMEAVVEKLSSHQKEDELR 501
Query: 1016 LDTHISQED 1024
+ ED
Sbjct: 502 SGGSVDLED 510
>SPAC1783.05 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1373
Score = 243 bits (619), Expect = 1e-63
Identities = 178/525 (33%), Positives = 262/525 (49%), Gaps = 72/525 (13%)
Query: 501 ELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQT-HHNGPHLVVVPS 559
E++D+Q TGINW+ L+ + + ILADEMGLGKT Q + FL+YL + +GP L+VVP
Sbjct: 389 EIRDFQLTGINWMAYLWHRNENGILADEMGLGKTVQTVCFLSYLVHSLKQHGPFLIVVPL 448
Query: 560 STLENWLREFNKFCPHLKVEPYYGSQQERAELRDI-----LEENEGQYDVIVTTYNLAAG 614
ST+ W + P L Y G+ + RA +R+ + ++++++TTY
Sbjct: 449 STVPAWQETLANWTPDLNSICYTGNTESRANIREYEFYLSTNSRKLKFNILLTTYEYILK 508
Query: 615 TKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMS 674
K + L N + + DE H LKNS S + L + RLL+TGTPLQNNLKEL S
Sbjct: 509 DKQE---LNNIRWQYLAIDEAHRLKNSESSLYETLSQFRTANRLLITGTPLQNNLKELAS 565
Query: 675 LLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKD 734
L+ F+MP F +D+L F Q + D I + ++PFILRR K
Sbjct: 566 LVNFLMPGKFYI-RDELN--FDQPNAEQERD-----------IRDLQERLQPFILRRLKK 611
Query: 735 QVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSKNLIMA 794
V K LP K IL E++++Q Y K ++ + G + ++ N+++
Sbjct: 612 DVEKSLPSKSERILRVELSDMQTEWY----KNILTKNYRALTGHTDGRGQLSL-LNIVVE 666
Query: 795 LRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFELHKLCCK 854
L+K S HP LF E + G + +ED
Sbjct: 667 LKKVSNHPYLF----------------PGAAEKWMMGR-KMTRED--------------- 694
Query: 855 FPSLYKFKLQSDEWMNSGK-VEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLN 913
+L + S + + K +++LK H++ L+FS ++L+IL +S
Sbjct: 695 --TLRGIIMNSGKMVLLDKLLQRLKHDGHRV--------LIFSQMVRMLNILGEYMSLRG 744
Query: 914 IKFLRLDGQTQVNDRQSLIDRFYEDDTIP-VFLLSTKAGGFGINLVCANNVIIFDQSFNP 972
+ RLDG + R+ ID F D+ VFLLST+AGG GINL A+ VIIFD +NP
Sbjct: 745 YNYQRLDGTIPASVRRVSIDHFNAPDSPDFVFLLSTRAGGLGINLNTADTVIIFDSDWNP 804
Query: 973 HDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALD 1017
D QA RAHR+GQ V V +S+DT+EE IL A+ K+ L+
Sbjct: 805 QADLQAMARAHRIGQKNHVNVYRFLSKDTVEEDILERARRKMILE 849
>SPBC1826.01c [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 635
Score = 238 bits (607), Expect = 4e-62
Identities = 176/612 (28%), Positives = 302/612 (48%), Gaps = 73/612 (11%)
Query: 469 ARTKQKKTSITQLRNNQMKFIRQKPKLLSSDVELKDYQQTGINWLHLLYQNDLSCILADE 528
+R K++K + Q+ N P +S+D L+ YQQ G+NWL L + +L IL D+
Sbjct: 10 SREKERKF-LEQMLNPSKVEAFSIPVPISAD--LRKYQQEGVNWLAFLNKYELHGILCDD 66
Query: 529 MGLGKTCQVISFLAYLKQTHHNG---------------PHLVVVPSSTLENWLREFNKFC 573
MGLGKT Q I +A H+N P L+V PS+ +W +E + +
Sbjct: 67 MGLGKTLQTICIVA---SDHYNRQKLFEESGSPKFAHVPSLIVCPSTLAGHWQQELSTYA 123
Query: 574 PHLKVEPYYGSQQERAELRDILEENEGQYDVIVTTYNLAAGTKYDVSFLRNRNFDVVVYD 633
P LKV Y G ERA++R ++++ DV+VT+Y++ + DV L +++ V D
Sbjct: 124 PFLKVSAYVGPPAERAKIRSKMKKS----DVVVTSYDIC---RNDVDELVKIDWNYCVLD 176
Query: 634 EGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKD---- 689
EGH++KN+ ++ + + ++ RL+L+GTP+QNN+ EL SL +F+MP ++K
Sbjct: 177 EGHVIKNARAKLTKAVKSLRSYHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKTFQER 236
Query: 690 ---DLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQVLKHLPRKHNH 746
+A K+ + + ++G A+E + PF+LRR K+ VL LP K
Sbjct: 237 FVRPIAASRDAKSSSKERERG------TLALEAIHKQVLPFMLRRLKEDVLADLPPKIIQ 290
Query: 747 ILHCEMTELQKTLYQQEIKQ------VMEHRRKIKEGVKMEKASRNVSKNLIMALRKASI 800
+C+M++LQ+ L + Q + + + +G + +K+ + + +RK
Sbjct: 291 DYYCDMSDLQRKLLNDFVSQLNINEELEDDETEKTQGTRKKKSQKAHIFQALQYMRKLCN 350
Query: 801 HPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFELHKLCCKFPSLYK 860
HP L E N ++ + ++ S + D + L +
Sbjct: 351 HPALI----------------LTEKHPKRNAIVKQLAKENSGLHDLKHAPKLTALGQLLR 394
Query: 861 FKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILE--FVLSTL-NIKFL 917
+ +NS ++ + + +VL+F +LD++E + +T+ ++ ++
Sbjct: 395 DCGLGNSSVNSNGIDSALTNA-----VSEHRVLIFCQLKDMLDMVEKDLLQATMPDVTYM 449
Query: 918 RLDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQ 977
RLDG + RQ + +F D +I V LL+T GG G+NL A+ VI + +NP D Q
Sbjct: 450 RLDGSVEPTKRQEAVTKFNNDPSIDVLLLTTHVGGLGLNLTGADTVIFVEHDWNPMRDLQ 509
Query: 978 AADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKL-ALDTHISQEDKKNEEALENKVT 1036
A DRAHR+GQ K V V LI+R +EEKI+ L + K+ T ++Q++ +++
Sbjct: 510 AMDRAHRIGQKKVVNVYRLITRGCLEEKIMGLQRFKMNVASTVVNQQNAGLSSIGTDQIL 569
Query: 1037 DLLEDIIFDENQ 1048
DL + DE Q
Sbjct: 570 DLF-NTTADEQQ 580
>Hs17454125 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1849
Score = 234 bits (597), Expect = 5e-61
Identities = 184/577 (31%), Positives = 282/577 (47%), Gaps = 75/577 (12%)
Query: 499 DVELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLA----YLKQTHHNG--- 551
+ EL+ YQQ G+NWL L + L IL D+MGLGKT Q I LA + Q +
Sbjct: 1263 NAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQEYARSKLA 1322
Query: 552 -----PHLVVVPSSTLENWLREFNKFCPHLKVEP--YYGSQQERAELRDILEENEGQYDV 604
P LVV P + +W+ E KFC + P Y G ER L+ ++ ++++
Sbjct: 1323 ECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVK----RHNL 1378
Query: 605 IVTTYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTP 664
IV +Y++ + D+ F RN F+ + DEGH++KN ++ + ++ A++R++L+GTP
Sbjct: 1379 IVASYDVV---RNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTP 1435
Query: 665 LQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNP----LLAEHAIERA 720
+QNN+ EL SL +F+MP +++ A K + DA +LA A+ R
Sbjct: 1436 IQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMDALHR- 1494
Query: 721 KTMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKM 780
+ PF+LRR K+ VL+ LP K +C ++ LQ LY+ K + + E V
Sbjct: 1495 --QVLPFLLRRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKS--RAKCDVDETVSS 1550
Query: 781 EKASRNVSKNLIMA----------LRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYEN 830
S K + A LRK HP L PE+
Sbjct: 1551 ATLSEETEKPKLKATGHVFQALQYLRKLCNHPAL--------------VLTPQHPEF--K 1594
Query: 831 GNIEYIKEDMSYMTDFELHKLCCKFPSLYKFK-LQSDEWMNSGKVEQLKSVLHKIIDIQH 889
E + S + D + P L K L D + +G + + + + QH
Sbjct: 1595 TTAEKLAVQNSSLHDIQ------HAPKLSALKQLLLDCGLGNGSTSESGT---ESVVAQH 1645
Query: 890 EKVLVFSLFTQVLDILEFVL---STLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLL 946
++L+F +LDI+E L ++ +LRLDG R S++ RF D +I V LL
Sbjct: 1646 -RILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLL 1704
Query: 947 STKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKI 1006
+T GG G+NL A+ V+ + +NP D QA DRAHR+GQ + V V LI+R T+EEKI
Sbjct: 1705 TTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKI 1764
Query: 1007 LHLAKNKLAL-DTHISQEDKKNEEALENKVTDLLEDI 1042
+ L K K+ + +T ISQE+ +L++ TD L D+
Sbjct: 1765 MGLQKFKMNIANTVISQEN----SSLQSMGTDQLLDL 1797
>Hs4557565 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains
SNF2 family DNA-dependent ATPase domain)
Length = 1493
Score = 233 bits (593), Expect = 2e-60
Identities = 171/557 (30%), Positives = 270/557 (47%), Gaps = 77/557 (13%)
Query: 501 ELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHHN---------- 550
+L YQQTG+ WL L+ IL DEMGLGKT Q+I+FLA L +
Sbjct: 506 KLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEG 565
Query: 551 -GPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQYDVIVTTY 609
GP ++V P++ + W++EF+ + P +V + + + ++ + + +++T+Y
Sbjct: 566 LGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRDVAHCHGILITSY 625
Query: 610 NLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNL 669
+ + D+S ++ V+ DEGH ++N + + R++L+G+P+QNNL
Sbjct: 626 SYIRLMQDDIS---RYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNL 682
Query: 670 KELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGY---NPLLAEHAIERA---KTM 723
+EL SL +FI P K VF ++ GY +P+ + A + A +
Sbjct: 683 RELWSLFDFIFPG-----KLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDT 737
Query: 724 MKPFILRRKKDQVLK--HLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKME 781
+ P++LRR K V LP K+ +L C +T+ Q +YQ + KE ++
Sbjct: 738 INPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDS--------KEVYRIL 789
Query: 782 KASRNVSKNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMS 841
+ LI ALRK HP LF P+ + + ++ED
Sbjct: 790 NGEMQIFSGLI-ALRKICNHPDLF----------------SGGPKNLKGLPDDELEED-- 830
Query: 842 YMTDFELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQV 901
Q W SGK+ ++S+L KI Q ++VL+FS Q+
Sbjct: 831 ----------------------QFGYWKRSGKMIVVESLL-KIWHKQGQRVLLFSQSRQM 867
Query: 902 LDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKAGGFGINLVCAN 961
LDILE L +L++DG T + RQ LI R+ ED +I VFLL+T+ GG G+NL AN
Sbjct: 868 LDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFLLTTRVGGLGVNLTGAN 927
Query: 962 NVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHIS 1021
V+I+D +NP D QA +RA R+GQ K+V V L++ TIEEKI H K L +
Sbjct: 928 RVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVL 987
Query: 1022 QEDKKNEEALENKVTDL 1038
++ K+ N + +L
Sbjct: 988 KDPKQRRFFKSNDLYEL 1004
>7300091 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1861
Score = 232 bits (591), Expect = 3e-60
Identities = 177/561 (31%), Positives = 275/561 (48%), Gaps = 64/561 (11%)
Query: 500 VELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLA---YLKQTHH--NGPHL 554
VEL+ YQQ GINWL L + +L IL D+MGLGKT Q I LA +QT + N P L
Sbjct: 1286 VELRCYQQAGINWLWFLNKYNLHGILCDDMGLGKTLQTICILAGDHMHRQTANLANLPSL 1345
Query: 555 VVVPSSTLENWLREFNKFCPH---LKVEPYYGSQQERAELRDILEENEGQYDVIVTTYNL 611
V+ P + +W+ E KF L+ YYG R +LR + + +++V +Y+
Sbjct: 1346 VICPPTLTGHWVYEVEKFLDQGSVLRPLHYYGFPVGREKLRSDIGT---KCNLVVASYDT 1402
Query: 612 AAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKE 671
+ D+ F +F+ V DEGH++KN ++ + ++ A+ RL+L+GTP+QNN+ E
Sbjct: 1403 V---RKDIDFFSGIHFNYCVLDEGHIIKNGKTKSSKAIKRLKANHRLILSGTPIQNNVLE 1459
Query: 672 LMSLLEFIMPNLFVSKKDDL----ATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPF 727
L SL +F+MP ++K + + + S A + +LA A+ R + PF
Sbjct: 1460 LWSLFDFLMPGFLGTEKQFVQRFSRPILSSRDAKSSAKEQEAGVLAMEALHR---QVLPF 1516
Query: 728 ILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQ-EIKQVMEHRRKIKEGVKMEKASRN 786
+LRR K+ VLK LP K L CE++ LQ LY+ K + + K+ + + N
Sbjct: 1517 LLRRVKEDVLKDLPPKITQDLLCELSPLQLRLYEDFSNKHLKDCLDKLGDSSSASMVTEN 1576
Query: 787 VS--KNLIMALR---KASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMS 841
+S ++ ALR HP L + N +++ I+
Sbjct: 1577 LSAKTHIFQALRYLQNVCNHPKLVLRQSEELTKVTSQLA-------LSNSSLDDIEHS-- 1627
Query: 842 YMTDFELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQV 901
K P+L + L + + V Q + L+F +
Sbjct: 1628 -----------AKLPALKQLLLDCGIGVQTESVSQ-------------HRALIFCQLKAM 1663
Query: 902 LDILEFVL---STLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKAGGFGINLV 958
LDI+E L ++ +LRLDG + RQ +++ F D +I V LL+T GG G+NL
Sbjct: 1664 LDIVEQDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTTMVGGLGLNLT 1723
Query: 959 CANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNK-LALD 1017
A+ VI + +NP D QA DRAHR+GQ K V V LI+R+++EEKI+ L K K L +
Sbjct: 1724 GADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKILTAN 1783
Query: 1018 THISQEDKKNEEALENKVTDL 1038
T +S E+ + +++ DL
Sbjct: 1784 TVVSAENASLQTMGTSQIFDL 1804
>At2g44980 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 861
Score = 224 bits (570), Expect = 7e-58
Identities = 170/548 (31%), Positives = 270/548 (49%), Gaps = 83/548 (15%)
Query: 502 LKDYQQTGINWLHLLYQNDLSCILA-DEMGLGKTCQVISFLAYLK-QTHHNGPHLVVVPS 559
LK +Q G++WL Y ++ +L D+MGLGKT Q ISFL+YLK + GP LV+ P
Sbjct: 51 LKPHQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISFLSYLKFRQGLPGPFLVLCPL 110
Query: 560 STLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEG--QYDVIVTTYNLAAGTKY 617
S + W+ E N+F P+L+V Y G + R ++R + ++ +DV++TTY++A
Sbjct: 111 SVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRKSMYDHGHFLPFDVLLTTYDIAL---V 167
Query: 618 DVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMK-INAHFRLLLTGTPLQNNLKELMSLL 676
D FL + + DE LKN S +N L++ RLL+TGTP+QNNL EL +L+
Sbjct: 168 DQDFLSQIPWQYAIIDEAQRLKNPNSVLYNVLLEQFLIPRRLLITGTPIQNNLTELWALM 227
Query: 677 EFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQV 736
F MP +F D + FK+ T D G + + + K ++ F+LRR K +
Sbjct: 228 HFCMPLVF-GTLDQFLSAFKE---TGD---GLDVSNDKETYKSLKFILGAFMLRRTKSLL 280
Query: 737 LKH----LPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSKNLI 792
++ LP + + LQK +Y +++ + ++ G ++ +N++
Sbjct: 281 IESGNLVLPPLTELTVMVPLVSLQKKIYTSILRKELPGLLELSSG----GSNHTSLQNIV 336
Query: 793 MALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFELHKLC 852
+ LRKA HP LF I EPE +E G E++ +
Sbjct: 337 IQLRKACSHPYLFPGI---------------EPEPFEEG--EHLVQ-------------- 365
Query: 853 CKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTL 912
SGK+ L +L ++ D H +VL+FS T LDIL+ +
Sbjct: 366 -----------------ASGKLLVLDQLLKRLHDSGH-RVLLFSQMTSTLDILQDFMELR 407
Query: 913 NIKFLRLDGQTQVNDRQSLIDRF-----------YEDDTIPVFLLSTKAGGFGINLVCAN 961
+ RLDG + +R + I F + VF++ST+AGG G+NLV A+
Sbjct: 408 RYSYERLDGSVRAEERFAAIKNFSAKTERGLDSEVDGSNAFVFMISTRAGGVGLNLVAAD 467
Query: 962 NVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHIS 1021
VI ++Q +NP D+QA RAHR+GQ V L++ ++EE IL A+ KL L ++
Sbjct: 468 TVIFYEQDWNPQVDKQALQRAHRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHNVV 527
Query: 1022 QEDKKNEE 1029
++ + +E
Sbjct: 528 GDNMEEKE 535
>ECU09g0410 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains
SNF2 family DNA-dependent ATPase domain)
Length = 695
Score = 223 bits (569), Expect = 9e-58
Identities = 161/508 (31%), Positives = 253/508 (49%), Gaps = 68/508 (13%)
Query: 505 YQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHHNGPHLVVVPSSTLEN 564
YQQ G+ W+ LY+++ +LAD+MGLGKT QVI FL L + L++ P++ +
Sbjct: 154 YQQDGVRWMLRLYRDEKGGVLADDMGLGKTIQVIVFLGALLHSRVVSKALILCPATIVSQ 213
Query: 565 WLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQYDVIVTTYNLAAGTKYDVSFLRN 624
W+ E+ +F P +++ ++G E+ EG Y +++ AG K N
Sbjct: 214 WMDEWKRFYPFVRI--FFGFPN---------EDCEGVY--LMSYEKFKAGVK-------N 253
Query: 625 RNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLF 684
+DV++ DEGH +KN ++ + K + R +L+GTP+QNNL EL S+ +F+ P L
Sbjct: 254 FLWDVLILDEGHRIKNKNAQITLSVKKARSRGRFVLSGTPIQNNLGELWSIFDFVNPGLL 313
Query: 685 VSKKDDLATVFKQKTRTSDADKGY---NPLLAEHAIERA---KTMMKPFILRRKKDQVLK 738
S T F ++ GY + L E A + +++++P+ILRR K QV
Sbjct: 314 GSH-----TSFNEEFEEVIRRGGYRNASNLQVEKAYRHSLMLRSLIEPYILRRTKSQVSH 368
Query: 739 HLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSKNLIMALRKA 798
LP K + I+ C +T Q LY + ++ +H K+ G N+ + M LRK
Sbjct: 369 KLPSKEDKIVFCSLTPAQIELYNRVLES--KHIMKVLTG------KANLLSGISM-LRKV 419
Query: 799 SIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFELHKLCCKFPSL 858
HP L + + E+ +E D+SY +L CK L
Sbjct: 420 CNHPRLL--FPRKLGVSEDCEEEASDEKNGEDEALELPGADVSY----DLVSSSCKIKIL 473
Query: 859 YKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLR 918
+W + G KVLVFS ++LDI+E + +LR
Sbjct: 474 VDL---LKKWRSEG-----------------NKVLVFSQTIRMLDIIERCVR--KYTYLR 511
Query: 919 LDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQA 978
+DG+T + R L+DRF ED+ + +FLL+TK GG G+NL A+ ++I+D +NP D QA
Sbjct: 512 MDGRTPTSSRPGLVDRFNEDEDVFLFLLTTKVGGLGLNLTGASRIVIYDPDWNPSTDTQA 571
Query: 979 ADRAHRVGQTKEVQVTTLISRDTIEEKI 1006
+RA R GQ K V++ + +DTIEEK+
Sbjct: 572 KERAWRYGQKKGVEIYRFVCKDTIEEKV 599
>At3g54280 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 2049
Score = 222 bits (565), Expect = 3e-57
Identities = 179/587 (30%), Positives = 285/587 (48%), Gaps = 89/587 (15%)
Query: 500 VELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHHNG-------P 552
V+L+ YQQ GINWL L + L IL D+MGLGKT Q + +A P
Sbjct: 1442 VQLRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGSTDELDVFP 1501
Query: 553 HLVVVPSSTLENWLREFNKFCPH--LKVEPYYGSQQERAELRDILEENEGQYDVIVTTYN 610
++V PS+ + +W E K+ L V Y GS Q+R LR E ++VI+T+Y+
Sbjct: 1502 SIIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLR----EQFNNHNVIITSYD 1557
Query: 611 LAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLK 670
+ + DV +L +++ + DEGH++KN+ S+ + ++ A RL+L+GTP+QNN+
Sbjct: 1558 VV---RKDVDYLTQFSWNYCILDEGHIIKNAKSKITAAVKQLKAQHRLILSGTPIQNNIM 1614
Query: 671 ELMSLLEFIMPNLFVSKKDDLATVFK-------QKTRTSDADKGYNPLLAEHAIERAKTM 723
EL SL +F+MP +++ A+ K K DA+ G +LA A+ +
Sbjct: 1615 ELWSLFDFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEAG---VLAMEALHK---Q 1668
Query: 724 MKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQ--------QEIKQVMEHRRKIK 775
+ PF+LRR K++VL LP K +C+++ +Q LY+ QEI +++
Sbjct: 1669 VMPFLLRRTKEEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSSAKQEISSIIKVDGSAD 1728
Query: 776 EG---VKMEKASRNVSKNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGN 832
G V KAS +V + L L+ S HPLL + D
Sbjct: 1729 SGNADVAPTKASTHVFQALQYLLKLCS-HPLL---VLGDKVT------------------ 1766
Query: 833 IEYIKEDMSYMTD------FELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIID 886
E + D++ M + ELHK+ P L + E + + S +
Sbjct: 1767 -EPVASDLAAMINGCSDIITELHKV-QHSPKLVALQ----EILEECGIGSDASSSDGTLS 1820
Query: 887 IQHEKVLVFSLFTQVLDILE---FVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPV 943
+ +VL+F+ +LDI+E F ++ ++RLDG R ++ F D TI V
Sbjct: 1821 VGQHRVLIFAQHKALLDIIEKDLFQAHMKSVTYMRLDGSVVPEKRFEIVKAFNSDPTIDV 1880
Query: 944 FLLSTKAGGFGINLVCANNVIIFDQSFNPHDDR-----------QAADRAHRVGQTKEVQ 992
LL+T GG G+NL A+ ++ + +NP D QA DRAHR+GQ + V
Sbjct: 1881 LLLTTHVGGLGLNLTSADTLVFMEHDWNPMRDHQFANIELNKLWQAMDRAHRLGQKRVVN 1940
Query: 993 VTTLISRDTIEEKILHLAKNKLAL-DTHISQEDKKNEEALENKVTDL 1038
V LI R T+EEK++ L K K+++ +T I+ E+ + +++ DL
Sbjct: 1941 VHRLIMRGTLEEKVMSLQKFKVSVANTVINAENASMKTMNTDQLLDL 1987
>At2g18760 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains
SNF2 family DNA-dependent ATPase domain)
Length = 1187
Score = 219 bits (557), Expect = 2e-56
Identities = 168/551 (30%), Positives = 247/551 (44%), Gaps = 115/551 (20%)
Query: 501 ELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHHNGPHLVVVPSS 560
+L DYQ+ G+ WL L+ I+ DEMGLGKT QV+SFL L + P +++ P +
Sbjct: 384 KLFDYQRVGVQWLWELHCQRAGGIIGDEMGLGKTIQVLSFLGSLHFSKMYKPSIIICPVT 443
Query: 561 TLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQYD----------------- 603
L W RE K+ P VE + S Q+ + + +E YD
Sbjct: 444 LLRQWRREAQKWYPDFHVEILHDSAQDSGHGKGQGKASESDYDSESSVDSDHEPKSKNTK 503
Query: 604 ---------------VIVTTYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNK 648
+++TTY + L N + V DEGH ++N S+
Sbjct: 504 KWDSLLNRVLNSESGLLITTYEQL---RLQGEKLLNIEWGYAVLDEGHRIRNPNSDITLV 560
Query: 649 LMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGY 708
++ R+++TG P+QN L EL SL +F+ P K + VF+ + GY
Sbjct: 561 CKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPG-----KLGVLPVFEAEFSVPITVGGY 615
Query: 709 ---NPLLAEHAIERA---KTMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQ- 761
+PL A A + ++ P++LRR K V HL +K H+L C +T Q++ Y+
Sbjct: 616 ANASPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAHLTKKTEHVLFCSLTVEQRSTYRA 675
Query: 762 ----QEIKQVMEHRRKIKEGVKMEKASRNVSKNLIMALRKASIHPLLFRHIYNDXXXXXX 817
E++Q+ + R G+ + +RK HP L ++
Sbjct: 676 FLASSEVEQIFDGNRNSLYGIDV--------------MRKICNHPDLLEREHS------- 714
Query: 818 XXXXXXEPEYYENGNIEYIKEDMSYMTDFELHKLCCKFPSLYKFKLQSDEWMNSGKVEQL 877
P+Y GN E SGK++ +
Sbjct: 715 ----HQNPDY---GNPE-----------------------------------RSGKMKVV 732
Query: 878 KSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYE 937
VL K+ Q +VL+FS Q+LDILE L + R+DG T V R +LID F
Sbjct: 733 AEVL-KVWKQQGHRVLLFSQTQQMLDILESFLVANEYSYRRMDGLTPVKQRMALIDEFNN 791
Query: 938 DDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLI 997
+ + VF+L+TK GG G NL AN VIIFD +NP +D QA +RA R+GQ K+V V LI
Sbjct: 792 SEDMFVFVLTTKVGGLGTNLTGANRVIIFDPDWNPSNDMQARERAWRIGQKKDVTVYRLI 851
Query: 998 SRDTIEEKILH 1008
+R TIEEK+ H
Sbjct: 852 TRGTIEEKVYH 862
>At1g03750 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains
SNF2 family DNA-dependent ATPase domain)
Length = 874
Score = 216 bits (550), Expect = 1e-55
Identities = 168/558 (30%), Positives = 280/558 (50%), Gaps = 78/558 (13%)
Query: 497 SSDVELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLA--YLKQ-------- 546
S + L ++Q+ G+ +++ LY+N+ IL D+MGLGKT Q I+FLA Y K
Sbjct: 146 SINCRLLEHQREGVKFMYNLYKNNHGGILGDDMGLGKTIQTIAFLAAVYGKDGDAGESCL 205
Query: 547 -THHNGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQ-YDV 604
GP L++ PSS + NW EF+++ KV Y+GS ++ ILE+ + + +V
Sbjct: 206 LESDKGPVLIICPSSIIHNWESEFSRWASFFKVSVYHGSNRDM-----ILEKLKARGVEV 260
Query: 605 IVTTYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTP 664
+VT+++ + L N+++V+ DE H LKN S+ + ++I R+ LTGT
Sbjct: 261 LVTSFDTF---RIQGPVLSGINWEIVIADEAHRLKNEKSKLYEACLEIKTKKRIGLTGTV 317
Query: 665 LQNNLKELMSLLEFIMPNLFVSK---KDDLATVFKQKTRTSDADKGYNPLLAEHAIERAK 721
+QN + EL +L E++ P ++ +D K R + ++ +A+ +
Sbjct: 318 MQNKISELFNLFEWVAPGSLGTREHFRDFYDEPLKLGQRATAPERFVQ--IADKRKQHLG 375
Query: 722 TMMKPFILRRKKDQVLKHLPR-KHNHILHCEMTELQKTLYQQEI---------------- 764
++++ ++LRR K++ + HL K ++++ C+M++LQ+ +YQ+ I
Sbjct: 376 SLLRKYMLRRTKEETIGHLMMGKEDNVVFCQMSQLQRRVYQRMIQLPEIQCLVNKDNPCA 435
Query: 765 -----KQVMEHRRKIKEGVKMEKASRN-----------VSKNLIMALRKASIHPLLFRHI 808
KQ RR + +G R+ + +M L++ S H L +
Sbjct: 436 CGSPLKQSECCRRIVPDGTIWSYLHRDNHDGCDSCPFCLVLPCLMKLQQISNHLELIKPN 495
Query: 809 YNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFELHKLCCKFPSLYKFKLQSDEW 868
D EPE + + E++ + TD +L S K + +
Sbjct: 496 PKD------------EPE-KQKKDAEFV--STVFGTDIDL----LGGISASKSFMDLSDV 536
Query: 869 MNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDR 928
+ GK+ L+ ++ I + +K+L+FS ++LDILE L F RLDG T N R
Sbjct: 537 KHCGKMRALEKLMASWIS-KGDKILLFSYSVRMLDILEKFLIRKGYSFARLDGSTPTNLR 595
Query: 929 QSLIDRFYEDDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQT 988
QSL+D F + VFL+STKAGG G+NLV AN V+IFD ++NP D QA DR+ R GQ
Sbjct: 596 QSLVDDFNASPSKQVFLISTKAGGLGLNLVSANRVVIFDPNWNPSHDLQAQDRSFRYGQK 655
Query: 989 KEVQVTTLISRDTIEEKI 1006
+ V V L+S ++EE +
Sbjct: 656 RHVVVFRLLSAGSLEELV 673
>YJR035w [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains
SNF2 family DNA-dependent ATPase domain)
Length = 1085
Score = 213 bits (541), Expect = 2e-54
Identities = 174/609 (28%), Positives = 269/609 (43%), Gaps = 157/609 (25%)
Query: 502 LKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHHN----GPHLVVV 557
L +YQ+T + WL+ LYQ + I+ DEMGLGKT QVI+F+A L HH+ GP L+V
Sbjct: 297 LFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAAL---HHSGLLTGPVLIVC 353
Query: 558 PSSTLENWLREFNKFCPHLKV-------------------------------------EP 580
P++ ++ W EF + P L+ E
Sbjct: 354 PATVMKQWCNEFQHWWPPLRTVILHSMGSGMASDQKFKMDENDLENLIMNSKPSDFSYED 413
Query: 581 YYGSQQERAELRD------ILEENEGQYDVIVTTYNLAAGTKYDVSFLRNRNFDVVVYDE 634
+ S + + L ++++ +++TTY G + L + V DE
Sbjct: 414 WKNSTRTKKALESSYHLDKLIDKVVTDGHILITTY---VGLRIHSDKLLKVKWQYAVLDE 470
Query: 635 GHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATV 694
GH ++N SE K+ H R++L+GTP+QNNL EL SL +FI P K V
Sbjct: 471 GHKIRNPDSEISLTCKKLKTHNRIILSGTPIQNNLTELWSLFDFIFPG-----KLGTLPV 525
Query: 695 FKQK------------TRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQVLKHLPR 742
F+Q+ GY +A + ++ P++LRR K V K LP+
Sbjct: 526 FQQQFVIPINIGGYANATNIQVQTGYKCAVA------LRDLISPYLLRRVKADVAKDLPQ 579
Query: 743 KHNHILHCEMTELQKT-----LYQQEIKQVMEHRRKIKEGVKMEKASRNVSKNLIMALRK 797
K +L C++T+ Q++ L+ ++ Q+ +R + G+ + LRK
Sbjct: 580 KKEMVLFCKLTKYQRSKYLEFLHSSDLNQIQNGKRNVLFGIDI--------------LRK 625
Query: 798 ASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYE---NGNIEYIKEDMSYMTDFELHKLCCK 854
HP L P+Y + +G ++ +K
Sbjct: 626 ICNHPDLL-----------DRDTKRHNPDYGDPKRSGKMQVVK----------------- 657
Query: 855 FPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLST--- 911
QL + HK Q K L+F+ Q+LDILE +ST
Sbjct: 658 ---------------------QLLLLWHK----QGYKALLFTQSRQMLDILEEFISTKDP 692
Query: 912 --LNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKAGGFGINLVCANNVIIFDQS 969
++ +LR+DG T + RQSL+DRF +++ VFLL+T+ GG G+NL AN +IIFD
Sbjct: 693 DLSHLNYLRMDGTTNIKGRQSLVDRF-NNESFDVFLLTTRVGGLGVNLTGANRIIIFDPD 751
Query: 970 FNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQEDKKNEE 1029
+NP D QA +RA R+GQ +EV + L+ +IEEKI H K L I + K+
Sbjct: 752 WNPSTDMQARERAWRIGQKREVSIYRLMVGGSIEEKIYHRQIFKQFLTNRILTDPKQKRF 811
Query: 1030 ALENKVTDL 1038
+++ DL
Sbjct: 812 FKIHELHDL 820
>SPCP25A2.02c [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains
SNF2 family DNA-dependent ATPase domain)
Length = 973
Score = 209 bits (532), Expect = 2e-53
Identities = 170/595 (28%), Positives = 275/595 (45%), Gaps = 127/595 (21%)
Query: 505 YQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHHNG----PHLVVVPSS 560
YQ T + WL LY + I+ DEMGLGKT Q++SFL+ L HH+G P L+V P++
Sbjct: 280 YQVTCVQWLWELYCQEAGGIIGDEMGLGKTIQIVSFLSSL---HHSGKFQKPALIVCPAT 336
Query: 561 TLENWLREFNKFCPHLKVEPYYGS------QQERAELRDILEENEGQYD----------- 603
++ W+ EF+ + L+V + + +E+ + E+E +
Sbjct: 337 LMKQWVNEFHTWWAPLRVVVLHATGSGQRASREKRQYESDASESEAEESKTSIKLRGASS 396
Query: 604 ------------------VIVTTYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSER 645
+++TTY AG + + R + V DEGH ++N SE
Sbjct: 397 SFHRYAKNLVESVFTRGHILITTY---AGLRIYGDLILPREWGYCVLDEGHKIRNPDSEI 453
Query: 646 FNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDAD 705
+I R++L+GTP+QNNL EL +L +F+ P + VF+ +
Sbjct: 454 SISCKQIRTVNRIILSGTPIQNNLTELWNLFDFVFPGRLGT-----LPVFQNQFALPINI 508
Query: 706 KGY---NPLLAEHAIERA---KTMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTL 759
GY + + + A + A + ++ P++LRR K V LP+K +L C++T LQ+
Sbjct: 509 GGYANASNVQVQTAYKCACMLRDLISPYLLRRMKLDVAADLPKKSEQVLFCKLTPLQRKA 568
Query: 760 YQQ-----EIKQVMEHRRKIKEGVKMEKASRNVSKNLIMALRKASIHPLLFRHIYNDXXX 814
YQ ++++++ +R++ G+ + LRK HP L Y
Sbjct: 569 YQDFLQGSDMQKILNGKRQMLYGIDI--------------LRKICNHPDLVTREY----- 609
Query: 815 XXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFELHKLCCKFPSLYKFKLQSDEWMNSGKV 874
E Y G+ E SGK+
Sbjct: 610 -------LLHKEDYNYGDPE-----------------------------------KSGKL 627
Query: 875 EQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTL-NIKFLRLDGQTQVNDRQSLID 933
+ ++++L + Q + L+FS Q+LDILE L L ++ + R+DG T + RQ L+D
Sbjct: 628 KVIRALL-TLWKKQGHRTLLFSQTRQMLDILEIGLKDLPDVHYCRMDGSTSIALRQDLVD 686
Query: 934 RFYEDDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQV 993
F +++ VFLL+T+ GG G+NL A+ VI+FD +NP D QA +RA R+GQ K+V V
Sbjct: 687 NFNKNEYFDVFLLTTRVGGLGVNLTGADRVILFDPDWNPSTDAQARERAWRLGQKKDVVV 746
Query: 994 TTLISRDTIEEKILHLAKNKLALDTHISQEDKKNEEALENKVTDLLEDIIFDENQ 1048
L++ TIEEKI H K L I ++ K+ K+TDL + +N+
Sbjct: 747 YRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRRFF---KMTDLHDLFTLGDNK 798
>CE25717 [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 1933
Score = 203 bits (517), Expect = 1e-51
Identities = 122/308 (39%), Positives = 178/308 (57%), Gaps = 20/308 (6%)
Query: 501 ELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHHN-GPHLVVVPS 559
+L++YQ G++W+ LY+ +L+ ILADEMGLGKT Q IS LA++ + GPHL+VVP+
Sbjct: 596 QLREYQMVGLDWMVTLYEKNLNGILADEMGLGKTIQTISLLAHMACSESIWGPHLIVVPT 655
Query: 560 STLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQYDVIVTTYNLAAGTKYDV 619
S + NW EF K+CP LK+ Y+G+ +ERAE R + + V +T+Y D+
Sbjct: 656 SVILNWEMEFKKWCPALKILTYFGTAKERAEKRKGWMK-PNCFHVCITSYKTVT---QDI 711
Query: 620 SFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFI 679
+ R + ++ DE +KN S+R+ L+ + A RLLLTGTPLQN+L EL SL+ F+
Sbjct: 712 RAFKQRAWQYLILDEAQNIKNWKSQRWQALLNVRARRRLLLTGTPLQNSLMELWSLMHFL 771
Query: 680 MPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQVLKH 739
MP +F S D T + + +N L I R +++PFILRR K +V K
Sbjct: 772 MPTIFSSHDDFKDWFSNPLTGMMEGNMEFNAPL----IGRLHKVLRPFILRRLKKEVEKQ 827
Query: 740 LPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSK--NLIMALRK 797
LP K HI++C +++ Q+ LY + RR KE +K S N+ N++M LRK
Sbjct: 828 LPEKTEHIVNCSLSKRQRYLYDDFMS-----RRSTKENLK----SGNMMSVLNIVMQLRK 878
Query: 798 ASIHPLLF 805
HP LF
Sbjct: 879 CCNHPNLF 886
Score = 118 bits (296), Expect = 4e-26
Identities = 68/176 (38%), Positives = 102/176 (57%), Gaps = 3/176 (1%)
Query: 872 GKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSL 931
GK++ L +L ++ +H + L+F+ +++LD+L+ LS ++ RLDG T V RQ++
Sbjct: 1239 GKLQTLAVLLRQLYLYKH-RCLIFTQMSKMLDVLQTFLSHHGYQYFRLDGTTGVEQRQAM 1297
Query: 932 IDRFYEDDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEV 991
++RF D + F+LST++GG G+NL A+ VI +D +NP D QA DR HR+GQT+ V
Sbjct: 1298 MERFNADPKVFCFILSTRSGGVGVNLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRNV 1357
Query: 992 QVTTLISRDTIEEKILHLAKNKLALDTHISQEDKKNEEALENKVTDLLEDIIFDEN 1047
+ LIS TIEE IL A K L E E K +D + D+ EN
Sbjct: 1358 SIYRLISERTIEENILRKATQKRRLGELAIDEAGFTPEFF--KQSDSIRDLFDGEN 1411
>Hs5730067 [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 2971
Score = 203 bits (516), Expect = 1e-51
Identities = 161/577 (27%), Positives = 260/577 (44%), Gaps = 64/577 (11%)
Query: 239 AIKKKQKIKLSDDEEDEITDQSNDDGELDTEPEYEEKVTESNFDQVLKFLNEADPKDLAD 298
A+ ++ K DE+DE + ++ E + + E+ E D ++ +LA
Sbjct: 188 AVTQRNKQPWHPDEDDEEFTANEEEAEDEEDTIAAEEQLEGEVDHAMEL------SELAR 241
Query: 299 LGEISIEK------AALVIKERPFEDLEQFQQLDFQSKSPSPAPGKARKSQQKKDGLKIL 352
GE+S+E+ A ED E ++D S P + ++D
Sbjct: 242 EGELSMEELLQQYAGAYAPGSGSSED-EDEDEVDANSSDCEPEGPVEAEEPPQEDSSSQS 300
Query: 353 DKIEQSIKGYNAIESLIRKCSKYGDVIANQMTNWGVDFSSSKDTELNILDVDTYSDDEAN 412
D +E + S + S G + + S S+++E D S +A+
Sbjct: 301 DSVEDRSEDEEDEHSEEEETS--GSSASEE--------SESEESE------DAQSQSQAD 344
Query: 413 ETITNDSANVQIIKSSTTSRENSLGPSKRKRNXXXXXXXXXXXXXXXXXXXXXKPRA--- 469
E +D V+ + + + + S +P+
Sbjct: 345 EEEEDDDFGVEYLLARDEEQSEADAGSGPPTPGPTTLGPKKEITDIAAAAESLQPKGYTL 404
Query: 470 RTKQKKTSITQLRNNQMKFIRQKPKLLSSDVELKDYQQTGINWLHLLYQNDLSCILADEM 529
T Q KT I L Q L++YQ G++WL +Y+ L+ ILADEM
Sbjct: 405 ATTQVKTPIPLLLRGQ----------------LREYQHIGLDWLVTMYEKKLNGILADEM 448
Query: 530 GLGKTCQVISFLAYLKQTHHN-GPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQER 588
GLGKT Q IS LA+L N GPHL++VP+S + NW E ++CP K+ YYG+Q+ER
Sbjct: 449 GLGKTIQTISLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKER 508
Query: 589 AELRDILEENEGQYDVIVTTYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNK 648
+L+ + V +T+Y L D R +N+ ++ DE +KN S+R+
Sbjct: 509 -KLKRQGWTKPNAFHVCITSYKLVL---QDHQAFRRKNWRYLILDEAQNIKNFKSQRWQS 564
Query: 649 LMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGY 708
L+ N+ RLLLTGTPLQN+L EL SL+ F+MP++F S ++ T + + Y
Sbjct: 565 LLNFNSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEY 624
Query: 709 NPLLAEHAIERAKTMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVM 768
N E ++R +++PF+LRR K V K +P+K+ H++ C +++ Q+ LY + Q
Sbjct: 625 N----EGLVKRLHKVLRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTT 680
Query: 769 EHRRKIKEGVKMEKASRNVSKNLIMALRKASIHPLLF 805
+ + G M N++M LRK HP LF
Sbjct: 681 T-KETLATGHFMSVI------NILMQLRKVCNHPNLF 710
Score = 123 bits (309), Expect = 1e-27
Identities = 70/173 (40%), Positives = 106/173 (60%), Gaps = 11/173 (6%)
Query: 848 LHKLCC----KFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLD 903
LH++ C +FP L + + GK++ L +VL + + + +VL+F+ T++LD
Sbjct: 1762 LHRIVCNMRTQFPDLRLIQY------DCGKLQTL-AVLLRQLKAEGHRVLIFTQMTRMLD 1814
Query: 904 ILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKAGGFGINLVCANNV 963
+LE L+ +LRLDG T+V RQ+L++RF D I F+LST++GG G+NL A+ V
Sbjct: 1815 VLEQFLTYHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLTGADTV 1874
Query: 964 IIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLAL 1016
+ +D +NP D QA DR HR+GQT++V + LIS T+EE IL A K L
Sbjct: 1875 VFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRML 1927
>YGL163c [L] KOG0390 DNA repair protein SNF2 family
Length = 898
Score = 202 bits (515), Expect = 2e-51
Identities = 163/518 (31%), Positives = 244/518 (46%), Gaps = 68/518 (13%)
Query: 523 CILADEMGLGKTCQVISFLAYLKQTHHNGPHLV-----VVPSSTLENWLREFNKFCPHLK 577
CI+ADEMGLGKT Q I+ + L + G L+ V PSS + NW E K+
Sbjct: 331 CIMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELIKWLGPNT 390
Query: 578 VEPYY---------GSQQERAELRDILEENEGQY---DVIVTTYNLAAGTKYDVSFLRNR 625
+ P G ++ + +G+ V++ +Y + +V L+N
Sbjct: 391 LTPLAVDGKKSSMGGGNTTVSQAIHAWAQAQGRNIVKPVLIISYETL---RRNVDQLKNC 447
Query: 626 NFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFV 685
N +++ DEGH LKN S F L I+ R++L+GTP+QN+L E +LL F P L
Sbjct: 448 NVGLMLADEGHRLKNGDSLTFTALDSISCPRRVILSGTPIQNDLSEYFALLSFSNPGLLG 507
Query: 686 SKKDDLATVFKQKTRTSDADKGYNPLL-AEHAIERAKTMMKPFILRRKKDQVLKHLPRKH 744
S+ + R DAD + E +++ T++ FI+RR D + K+LP K+
Sbjct: 508 SRAEFRKNFENPILRGRDADATDKEITKGEAQLQKLSTIVSKFIIRRTNDILAKYLPCKY 567
Query: 745 NHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSKNLIMALRKASIHPLL 804
H++ + LQ LY + IK R++K+ VK S+ + I L+K HP L
Sbjct: 568 EHVIFVNLKPLQNELYNKLIKS-----REVKKVVKGVGGSQPL--RAIGILKKLCNHPNL 620
Query: 805 FRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFELHKLCCKFPSLYKF--- 861
N E+ ED D EL P Y
Sbjct: 621 L------------------------NFEDEFDDED-----DLEL-------PDDYNMPGS 644
Query: 862 KLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDG 921
K + + S K L+ LHKI +K+++ S +TQ LD++E + + +RLDG
Sbjct: 645 KARDVQTKYSAKFSILERFLHKIKTESDDKIVLISNYTQTLDLIEKMCRYKHYSAVRLDG 704
Query: 922 QTQVNDRQSLIDRFYEDDTIP-VFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAAD 980
+N RQ L+DRF + + +FLLS+KAGG GINL+ AN +I+ D +NP D+QA
Sbjct: 705 TMSINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILMDPDWNPAADQQALA 764
Query: 981 RAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDT 1018
R R GQ K+ + IS TIEEKI K++L +
Sbjct: 765 RVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSS 802
>CE15856 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1529
Score = 199 bits (506), Expect = 2e-50
Identities = 160/539 (29%), Positives = 264/539 (48%), Gaps = 72/539 (13%)
Query: 493 PKLLSSDVE-------LKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYL- 544
P+++ +D+ L++YQ GI W+ L L ILAD+MGLGKT Q + +A
Sbjct: 966 PRVIRADIRGGFDTSMLREYQLEGITWIRFLRTYGLHGILADDMGLGKTLQTMCSIALSV 1025
Query: 545 ---KQTHHNGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQ 601
+ + + L+V P + +++W E+N+F P ++ AE+ I
Sbjct: 1026 DRDEMSEFHRCSLIVCPRTLVDHWCLEWNRFFPQRVPASKNLTRCHGAEICVIA------ 1079
Query: 602 YDVIVTTYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLT 661
YD + T Y + +R ++ +V DEGH+++NS + ++ RL+L+
Sbjct: 1080 YDELKTAY------------MMDRVWNYIVLDEGHVMRNSKLRAWKFASQLVGKSRLILS 1127
Query: 662 GTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQ--KTRTSDADKGYNPLLAEHAIER 719
GTP+QN+ +L SL ++MP S+K + K+ K R A++ + AI +
Sbjct: 1128 GTPVQNSPADLWSLFAWLMPGYLGSEKQFRSQFLKKIMKCRLPKANEA-DLKAGSAAISQ 1186
Query: 720 AKTMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVK 779
++ PF++RR K +VLK LP K+ CE+TE QK +Y + V++ +E V
Sbjct: 1187 LHKLVLPFVMRRLKTEVLKELPEKNVQDYECELTEDQKEIY----RFVVDRCTSSQEDVG 1242
Query: 780 MEKASRNVSKNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKED 839
+ S ++ LRK + H L +++ + ++G +E +K+
Sbjct: 1243 LS------SLVTLITLRKLTDHTKL---VHDTLAKIGAPQYILSKALAAKSGKMEALKQ- 1292
Query: 840 MSYMTDFELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFT 899
+ + E+ CK P DE +VEQ + L ++ H + L+F +
Sbjct: 1293 --LLIECEI----CKNP---------DE-----EVEQPED-LGGLVASGH-RALIFCQWK 1330
Query: 900 QVLDILEFVLSTLN----IKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKAGGFGI 955
++ L + + L LDG DR +++RF ED TI V +L+T GG G+
Sbjct: 1331 TSAKLVSDALKSGEFGSVVSHLVLDGSVPAGDRMKMVNRFNEDKTIDVLILTTHVGGVGL 1390
Query: 956 NLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKL 1014
NL A+ VI D +NP D QA DRAHR+GQT+ V V LI++ T+EEK++ LAK KL
Sbjct: 1391 NLTGADTVIFLDHDWNPMKDLQAIDRAHRLGQTRNVNVYRLITQGTVEEKVMSLAKFKL 1449
>SPAC15A10.03c [L] KOG0390 DNA repair protein SNF2 family
Length = 852
Score = 198 bits (504), Expect = 3e-50
Identities = 171/556 (30%), Positives = 258/556 (45%), Gaps = 69/556 (12%)
Query: 502 LKDYQQTGINWLHLLYQNDLS-----CILADEMGLGKTCQVISFL-AYLKQTHHNGPH-- 553
L+ +Q G+ +L+ + CI+ADEMGLGKT Q I+ L LKQ+ G
Sbjct: 264 LRPHQIEGVKFLYKCVTGRIDRCANGCIMADEMGLGKTLQCIALLWTLLKQSPQAGKPTI 323
Query: 554 ---LVVVPSSTLENWLREFNKFCPHLKVEPYY-GSQQERAELRDILEENEGQYDVIVTTY 609
++ PSS ++NW E K+ + P+ + + EL L++ + VT
Sbjct: 324 EKAIITCPSSLVKNWANELVKWLGKDAITPFILDGKSSKQELIMALQQWASVHGRQVTRP 383
Query: 610 NLAAG---TKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQ 666
L A + V L N +++ DEGH LKNS S F L K+N R++L+GTP+Q
Sbjct: 384 VLIASYETLRSYVEHLNNAEIGMLLCDEGHRLKNSDSLTFTALDKLNVQRRVILSGTPIQ 443
Query: 667 NNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDAD------KGYNPLLAEHAIERA 720
N+L E SLL F P L S+++ + DAD + + LAE A
Sbjct: 444 NDLSEYFSLLNFANPGLLGSRQEFRKNYEIPILKGRDADGTEKDKENGDAKLAELA---- 499
Query: 721 KTMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKM 780
++ FI+RR D + K+LP K+ H++ C ++E Q +LY+ I E K+
Sbjct: 500 -KIVNRFIIRRTNDILSKYLPVKYEHVVFCNLSEFQLSLYKHFITS--------PEINKI 550
Query: 781 EKASRNVSKNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDM 840
+ + + I L+K HP L ++ D P G I +
Sbjct: 551 LRGTGSQPLKAIGLLKKICNHPDLL-NLTEDLEGCEALFPPGFIPREL-RGRDRNIDSSL 608
Query: 841 SYMTDFELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQ 900
S GK+ L+ +L++I +K+++ S +T
Sbjct: 609 S------------------------------GKMLVLERMLYQIKQETDDKIVLISNYTS 638
Query: 901 VLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIP-VFLLSTKAGGFGINLVC 959
LD+ E + K LRLDG VN RQ L+D F + + VFLLS+KAGG GINL+
Sbjct: 639 TLDLFEQLCRARGYKALRLDGTMNVNKRQRLVDTFNDPEKDAFVFLLSSKAGGCGINLIG 698
Query: 960 ANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTH 1019
AN +I+FD +NP D+QA R R GQ K+ V I+ TIEEKI +K +L +
Sbjct: 699 ANRLILFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSC 758
Query: 1020 ISQE--DKKNEEALEN 1033
+ E D + +L+N
Sbjct: 759 VVDEAQDVERHFSLDN 774
>YGL150c [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 1489
Score = 198 bits (503), Expect = 4e-50
Identities = 149/501 (29%), Positives = 241/501 (47%), Gaps = 50/501 (9%)
Query: 323 QQLDFQSKSPSPAPGKARKSQQKKDGLKILDKIEQSIKGYNAIESLIRKCSKYGDVIANQ 382
++ D + K A +A+K +++K+ + K+ + I + K ++ N
Sbjct: 549 EERDLKKKIEKEAMEQAKKEEEEKESKRQAKKLNFLLTQTELYSHFIGRKIKTNELEGNN 608
Query: 383 MTNWGVDFSSSKDTELNILDV---DTYSDDEANETITNDSANVQIIKSSTTSRENSLGPS 439
+++ D S K+ +++ L D ++ D NE ND Q+ + + N+L +
Sbjct: 609 VSS--NDSESQKNIDISALAPNKNDFHAIDFDNE---NDE---QLRLRAAENASNALAET 660
Query: 440 KRKRNXXXXXXXXXXXXXXXXXXXXXKPRARTKQKKTSITQLRNNQMKFIRQKPKLLSSD 499
+ K P TS+ ++ Q PK+L+
Sbjct: 661 RAKAKQFDDHANAHEEEEEEDELNFQNP--------TSLGEITIEQ-------PKILACT 705
Query: 500 VELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHHN-GPHLVVVP 558
LK+YQ G+NWL LY ++ ILADEMGLGKT Q IS LA+L + H+ GP LVV P
Sbjct: 706 --LKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLAENHNIWGPFLVVTP 763
Query: 559 SSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQYD------VIVTTYNLA 612
+STL NW+ E +KF P K+ PY+G+ +R LR + +Y+ V+VT+Y +
Sbjct: 764 ASTLHNWVNEISKFLPQFKILPYWGNANDRKVLRKFWDRKNLRYNKNAPFHVMVTSYQMV 823
Query: 613 AGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKEL 672
D ++L+ + ++ DE +K+S S R+ L+ + RLLLTGTP+QN+++EL
Sbjct: 824 VT---DANYLQKMKWQYMILDEAQAIKSSQSSRWKNLLSFHCRNRLLLTGTPIQNSMQEL 880
Query: 673 MSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILRRK 732
+LL FIMP+LF S D+ F ++ ++ N L + + R ++KPF+LRR
Sbjct: 881 WALLHFIMPSLFDS-HDEFNEWF---SKDIESHAEANTKLNQQQLRRLHMILKPFMLRRV 936
Query: 733 KDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSK--- 789
K V L K + C++T+ Q LYQ Q+ + I+ + S + S
Sbjct: 937 KKNVQSELGDKIEIDVLCDLTQRQAKLYQVLKSQISTNYDAIENAATNDSTSNSASNSGS 996
Query: 790 -----NLIMALRKASIHPLLF 805
N +M RK HP LF
Sbjct: 997 DQNLINAVMQFRKVCNHPDLF 1017
Score = 114 bits (284), Expect = 1e-24
Identities = 64/162 (39%), Positives = 100/162 (61%), Gaps = 2/162 (1%)
Query: 871 SGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQS 930
S K+ +L +L K+ H +VL++ T+++D++E L+ +RLDG +++ DR+
Sbjct: 1298 SAKLRKLDELLVKLKSEGH-RVLIYFQMTKMMDLMEEYLTYRQYNHIRLDGSSKLEDRRD 1356
Query: 931 LIDRFYEDDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKE 990
L+ + + I VFLLST+AGG GINL A+ VI +D +NP D QA DRAHR+GQT++
Sbjct: 1357 LVHDWQTNPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQ 1416
Query: 991 VQVTTLISRDTIEEKILHLAKNKLALDTHISQEDKKNEEALE 1032
V V L+ R TIEE++ AK K + + E K E+ ++
Sbjct: 1417 VTVYRLLVRGTIEERMRDRAKQKEQVQ-QVVMEGKTQEKNIK 1457
>YDR334w [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 1514
Score = 198 bits (503), Expect = 4e-50
Identities = 186/672 (27%), Positives = 290/672 (42%), Gaps = 67/672 (9%)
Query: 172 NPAINLPSRNVSTSKITIEKQKT---SIFDRYSHVM-----KVSQPSPARSMADRTTMST 223
N I++ S++K I + K I + HV K + + R +
Sbjct: 357 NQGIHMSKLFRSSTKARIARAKKVSQMIEQHFKHVAGAEERKAKEEERHKKSLARFAVQA 416
Query: 224 IK---NLSSKKGKLVRGDA------IKKKQKIKLSDDEEDEITD----QSNDDGELDTEP 270
+K N++ K +++R D I+ KQ + ++ ++ + Q NDDG T
Sbjct: 417 VKKRWNMAEKAYRILRKDEEEQLKRIEGKQHLSKMLEKSTQLLEAQLNQVNDDGRSSTPS 476
Query: 271 EYEEKVTESNFDQVLKFLNEADPKDLADLGEISIEKAALVIKERPFEDLEQFQQLDFQSK 330
V + D + L+ + +D ++ +E + + P ++ QL +
Sbjct: 477 SDSNDVLSESDDDMDDELSTSSDEDEEVDADVGLENSPASTEATPTDESLNLIQLK-EKY 535
Query: 331 SPSPAPGKARKSQQKKDGLKILDKIEQSIKGYNAI---ESLIRKCSKYGDVIANQMTNWG 387
S+ K + LDK E S + + ES I S+ N+ N
Sbjct: 536 GHFNGSSTVYDSRNKDEKFPTLDKHESSSSESSVMTGEESSIYSSSE------NESQNEN 589
Query: 388 VDFSSSKDTELNILDVDTYSDDEANETITNDSANVQIIKSSTTSRENSLGPSKRKRNXXX 447
S K + + + ++ + +DS + + SS E K
Sbjct: 590 DRESDDKTPSVGLSALFGKGEESDGDLDLDDSEDFTVNSSSVEGEE------LEKDQVDN 643
Query: 448 XXXXXXXXXXXXXXXXXXKPRARTKQKKTSITQLRNNQMKFIRQK-PKLLSSDVELKDYQ 506
+ + ++ T+++ Q+ + P LL + L+ YQ
Sbjct: 644 SAATFERAGDFVHTQNENRDDIKDVEEDAE-TKVQEEQLSVVDVPVPSLLRGN--LRTYQ 700
Query: 507 QTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHHN-GPHLVVVPSSTLENW 565
+ G+NWL LY N + ILADEMGLGKT Q IS LAYL N GPHL+VVP+S L NW
Sbjct: 701 KQGLNWLASLYNNHTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNW 760
Query: 566 LREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQYDVIVTTYNLAAGTKYDVSFLRNR 625
EF +F P KV YYGS Q+R E R + + + V + +Y L ++ SF R R
Sbjct: 761 EMEFKRFAPGFKVLTYYGSPQQRKEKRKGWNKPDA-FHVCIVSYQLVVQDQH--SFKRKR 817
Query: 626 NFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFV 685
+ +V DE H +KN S R+ L+ N RLLLTGTPLQNNL EL SLL F+MP +
Sbjct: 818 -WQYMVLDEAHNIKNFRSTRWQALLNFNTQRRLLLTGTPLQNNLAELWSLLYFLMPQTVI 876
Query: 686 SKKD-----DLATVFKQKTRTSD--ADKGYN---PLLAEHAIERAKTMMKPFILRRKKDQ 735
K DL + R D + G N + + + +++P++LRR K
Sbjct: 877 DGKKVSGFADLDAFQQWFGRPVDKIIETGQNFGQDKETKKTVAKLHQVLRPYLLRRLKAD 936
Query: 736 VLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSK--NLIM 793
V K +P K+ HI++C++++ Q+ LY + + K AS N N +M
Sbjct: 937 VEKQMPAKYEHIVYCKLSKRQRFLYDDFMSRAQ---------TKATLASGNFMSIVNCLM 987
Query: 794 ALRKASIHPLLF 805
LRK HP LF
Sbjct: 988 QLRKVCNHPNLF 999
Score = 130 bits (327), Expect = 1e-29
Identities = 79/191 (41%), Positives = 112/191 (58%), Gaps = 8/191 (4%)
Query: 850 KLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVL 909
KL FP K LQ D GK+++L +L ++ D H + L+F+ T+VLD+LE L
Sbjct: 1230 KLTIAFPD--KSLLQYD----CGKLQKLAILLQQLKDNGH-RALIFTQMTKVLDVLEQFL 1282
Query: 910 STLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKAGGFGINLVCANNVIIFDQS 969
+ ++RLDG T++ DRQ L +RF D I VF+LS+++GG GINL A+ VI +D
Sbjct: 1283 NYHGYLYMRLDGATKIEDRQILTERFNTDSRITVFILSSRSGGLGINLTGADTVIFYDSD 1342
Query: 970 FNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQE-DKKNE 1028
+NP D+Q DR HR+GQT++V + +S TIE IL A K LD + QE D +
Sbjct: 1343 WNPAMDKQCQDRCHRIGQTRDVHIYRFVSEHTIESNILKKANQKRQLDNVVIQEGDFTTD 1402
Query: 1029 EALENKVTDLL 1039
+ V DLL
Sbjct: 1403 YFSKLSVRDLL 1413
>Hs4506397 [L] KOG0390 DNA repair protein SNF2 family
Length = 747
Score = 195 bits (496), Expect = 3e-49
Identities = 160/538 (29%), Positives = 262/538 (47%), Gaps = 61/538 (11%)
Query: 523 CILADEMGLGKTCQVISFL-AYLKQTHHNGPHL----VVVPSSTLENWLREFNKFCPHLK 577
CI+ADEMGLGKT Q I+ + L+Q+ P + VV PSS ++NW E K+ +
Sbjct: 179 CIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGG-R 237
Query: 578 VEPYYGSQQERAELRDILEENEGQYDVIVTTYNLAAGT---KYDVSFLRNRNFDVVVYDE 634
++P + E+ LE Q V++ L + V L+ + +V+ DE
Sbjct: 238 IQPLAIDGGSKDEIDQKLEGFMNQRGARVSSPILIISYETFRLHVGVLQKGSVGLVICDE 297
Query: 635 GHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLF-----VSKKD 689
GH LKNS ++ + L +N R+L++GTP+QN+L E SL+ F+ + K
Sbjct: 298 GHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHF 357
Query: 690 DLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQVLKHLPRKHNHILH 749
+L + + S+AD+ L E + +++ ++RR D + K+LP K ++
Sbjct: 358 ELPILKGRDAAASEADR----QLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVC 413
Query: 750 CEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSKNLIMALRKASIHPLLFRHIY 809
C +T LQ LY++ ++Q + ++ EG KM + S + I +L+K HP L IY
Sbjct: 414 CRLTPLQTELYKRFLRQA-KPAEELLEG-KMSVS----SLSSITSLKKLCNHPAL---IY 464
Query: 810 NDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFELHKLCCKFPSLYKFKLQSDEWM 869
+ + ++E+ ++ +L FP Y K +
Sbjct: 465 D-----------------------KCVEEEDGFVGALDL------FPPGYSSKALEPQL- 494
Query: 870 NSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQ 929
SGK+ L +L +KV++ S +TQ LD+ E + ++RLDG + R
Sbjct: 495 -SGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRA 553
Query: 930 SLIDRFYEDDTIP-VFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQT 988
+++RF + VF+LS+KAGG G+NL+ AN +++FD +NP +D QA R R GQ
Sbjct: 554 KVVERFNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQK 613
Query: 989 KEVQVTTLISRDTIEEKILHLAKNKLALDTHISQEDKKNEEALENKVTDLLEDIIFDE 1046
K + L+S TIEEKI +K AL + + E++ E + +L E I DE
Sbjct: 614 KTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHF--SLGELKELFILDE 669
>Hs6912622_2 [L] KOG0390 DNA repair protein SNF2 family
Length = 808
Score = 194 bits (494), Expect = 5e-49
Identities = 163/540 (30%), Positives = 271/540 (50%), Gaps = 72/540 (13%)
Query: 502 LKDYQQTGINWLH-----LLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHHNGPH--- 553
L+ +Q+ GI +L+ + ILADEMGLGKT Q IS + L+ GP+
Sbjct: 194 LRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQC---QGPYGGK 250
Query: 554 ------LVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAE--LRDILEENEGQYDVI 605
L+V P S + NW +EF K+ +++ + Q + E ++ I Y V+
Sbjct: 251 PVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEEFIKSIF------YSVL 304
Query: 606 VTTYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPL 665
+ +Y + + + ++N FD+++ DEGH LKNS + L+ ++ R++LTGTP+
Sbjct: 305 IISYEMLLRS---LDQIKNIKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPI 361
Query: 666 QNNLKELMSLLEFIMPNLFVS-----KKDDLATVFKQKTRTSDADKGYNPLLAEHAIERA 720
QN+L+E +L++F+ P + S K + + ++ S+ +K L E
Sbjct: 362 QNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKE----LGERRAAEL 417
Query: 721 KTMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEI-KQVMEHRRKIKEGVK 779
+ FILRR ++ + K+LP K +++ C LQ LY++ + QV+ R +G+
Sbjct: 418 TCLTGLFILRRTQEIINKYLPPKIENVVFCRPGALQIELYRKLLNSQVV---RFCLQGL- 473
Query: 780 MEKASRNVSKNLIMALRKASIHP-LLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKE 838
+E + + I AL+K HP LLF I E + + +E
Sbjct: 474 LENSPHLI---CIGALKKLCNHPCLLFNSI----------------KEKECSSTCDKNEE 514
Query: 839 DMSYMTDFELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQ-HEKVLVFSL 897
Y L FP+ Y L +++ SGK++ L +L I +++ EKV++ S
Sbjct: 515 KSLY------KGLLSVFPADYNPLLFTEK--ESGKLQVLSKLLAVIHELRPTEKVVLVSN 566
Query: 898 FTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRF-YEDDTIPVFLLSTKAGGFGIN 956
+TQ L+IL+ V + RLDGQT ++ RQ ++D F + + +FLLS+KAGG G+N
Sbjct: 567 YTQTLNILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFIFLLSSKAGGVGLN 626
Query: 957 LVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLAL 1016
L+ +++I++D +NP D QA R R GQ V + L++ TIEEKI +K L
Sbjct: 627 LIGGSHLILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGL 686
>ECU09g1890 [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 883
Score = 194 bits (493), Expect = 6e-49
Identities = 120/308 (38%), Positives = 177/308 (56%), Gaps = 28/308 (9%)
Query: 502 LKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHH-NGPHLVVVPSS 560
LK+YQ G+NWL LY ++ ILAD+MGLGKT Q IS LA+L +T GP LVV SS
Sbjct: 275 LKEYQLRGLNWLVSLYDKGINGILADDMGLGKTVQSISLLAHLYETEEVPGPFLVVTISS 334
Query: 561 TLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQYDVIVTTYNLAAGTKYDVS 620
TL+NW +EF +F P +V + GS ER EL+ + + DV++TTY A D
Sbjct: 335 TLDNWAQEFARFLPSFRVCRFSGSPSERKELKKRFKNS----DVVITTYQTAVS---DEK 387
Query: 621 FLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIM 680
L+ + ++ DE +K+SMS R+ L+ A RLLLTGTP+QN+++EL +LL FIM
Sbjct: 388 MLKKIKWQYMILDEAQAIKSSMSRRWKTLLSFKARNRLLLTGTPIQNSMQELWALLHFIM 447
Query: 681 PNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQVLKHL 740
P LF S ++ + F ++ TS K + E +++R ++KPF+LRR K V+ L
Sbjct: 448 PTLFDS-LNEFSDWFSKEIETSAIMK---KTVDEKSLQRLHAILKPFMLRRHKSDVIHEL 503
Query: 741 PRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSKNLIMALRKASI 800
+K L+C+++ QK LY++ + ++ME NL+M L+K
Sbjct: 504 GQKTQIDLYCDLSYRQKVLYKEITRSC--------SSMEME--------NLLMQLKKVCN 547
Query: 801 HPLLFRHI 808
HP LF+ +
Sbjct: 548 HPDLFKKL 555
Score = 110 bits (274), Expect = 2e-23
Identities = 60/144 (41%), Positives = 90/144 (61%), Gaps = 2/144 (1%)
Query: 870 NSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQ 929
+SGK+ L +L K+ H ++ F + T+++D++E L +LRLDG + + R
Sbjct: 724 DSGKLVVLDELLPKLKAEGHRLLMYFQM-TRMIDLIEDYLVRKGYTYLRLDGSLKASARA 782
Query: 930 SLIDRFYEDDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTK 989
+I + D +FLLST+AGG GINL A+ V+ +D +NP D+QA DRAHR+GQT+
Sbjct: 783 EVIRDWQASDKF-IFLLSTRAGGLGINLTAADTVVFYDSDWNPTADQQAMDRAHRLGQTR 841
Query: 990 EVQVTTLISRDTIEEKILHLAKNK 1013
+V V LI+R T+EEK+L A K
Sbjct: 842 DVTVYRLITRGTVEEKVLESANRK 865
>At3g57300 [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 1496
Score = 192 bits (488), Expect = 2e-48
Identities = 122/322 (37%), Positives = 173/322 (52%), Gaps = 17/322 (5%)
Query: 491 QKPKLLSSDVELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHHN 550
Q P+L LK+YQ G+ WL Y+ L+ ILADEMGLGKT Q ++FLA+L + +
Sbjct: 577 QTPELFKGT--LKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNI 634
Query: 551 -GPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDILE-----ENEGQYDV 604
GP LVV P+S L NW E ++FCP LK PY+G QER LR + + + +
Sbjct: 635 WGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERTILRKNINPKRMYRRDAGFHI 694
Query: 605 IVTTYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTP 664
++T+Y L D + R + +V DE +K+S S R+ L+ N RLLLTGTP
Sbjct: 695 LITSYQLLVT---DEKYFRRVKWQYMVLDEAQAIKSSSSIRWKTLLSFNCRNRLLLTGTP 751
Query: 665 LQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMM 724
+QNN+ EL +LL FIMP LF D + K + A+ G L EH + R ++
Sbjct: 752 IQNNMAELWALLHFIMPMLF--DNHDQFNEWFSKGIENHAEHG--GTLNEHQLNRLHAIL 807
Query: 725 KPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQ-EIKQVMEHRRKIKEGVKMEKA 783
KPF+LRR K V+ L K +HC+++ Q+ YQ + K + G +K
Sbjct: 808 KPFMLRRVKKDVVSELTTKTEVTVHCKLSSRQQAFYQAIKNKISLAELFDSNRGQFTDKK 867
Query: 784 SRNVSKNLIMALRKASIHPLLF 805
N+ N+++ LRK HP LF
Sbjct: 868 VLNL-MNIVIQLRKVCNHPELF 888
Score = 113 bits (283), Expect = 1e-24
Identities = 69/168 (41%), Positives = 101/168 (60%), Gaps = 17/168 (10%)
Query: 849 HKLCCKFPSLYKF---KLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDIL 905
H++ P + F KL +D SGK++ L +L ++ H +VL+F+ T++L+IL
Sbjct: 1184 HRIFGSCPPMQSFDPAKLLTD----SGKLQTLDILLKRLRAGNH-RVLLFAQMTKMLNIL 1238
Query: 906 EFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKAGGFGINLVCANNVII 965
E ++ K+LRLDG + + DR+ ++ F I VFLLST+AGG GINL A+ VI
Sbjct: 1239 EDYMNYRKYKYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIF 1298
Query: 966 FDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNK 1013
++ +NP D QA DRAHR+GQTK+ +T+EEKILH A K
Sbjct: 1299 YESDWNPTLDLQAMDRAHRLGQTKD---------ETVEEKILHRASQK 1337
>YBR073w [L] KOG0390 DNA repair protein SNF2 family
Length = 958
Score = 190 bits (483), Expect = 9e-48
Identities = 163/548 (29%), Positives = 252/548 (45%), Gaps = 87/548 (15%)
Query: 515 LLYQNDLS---CILADEMGLGKTCQVISFL-AYLKQTHHNGPH----------------L 554
L+ +ND C+LAD+MGLGKT I+ + ++QT L
Sbjct: 331 LVLENDSDISGCLLADDMGLGKTLMSITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKIL 390
Query: 555 VVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEEN----EGQYDVIVTTYN 610
VV P + + NW REF K+ ++ S + ++ + N + Y V++ Y
Sbjct: 391 VVCPVTLIGNWKREFGKWLNLSRIGVLTLSSRNSPDMDKMAVRNFLKVQRTYQVLIIGYE 450
Query: 611 LAAGTKYDVSFLRNRNF-DVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNL 669
++ +N++ D++V DEGH LKN S+ N L ++ +LLLTGTP+QN+L
Sbjct: 451 KLLSVSEELE--KNKHLIDMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDL 508
Query: 670 KELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMM---KP 726
E ++++FI P + S TR D YN L E ER+K M+ K
Sbjct: 509 NEFFTIIDFINPGILGSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKR 568
Query: 727 FILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKME--KAS 784
FILRR + K+LP K + IL C+ Y Q+I + I +G +++ + +
Sbjct: 569 FILRRTNAILEKYLPPKTDIILFCKP-------YSQQILAF----KDILQGARLDFGQLT 617
Query: 785 RNVSKNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMT 844
+ S LI L+K P L +P Y +I+ + SY
Sbjct: 618 FSSSLGLITLLKKVCNSPGL----------------VGSDP--YYKSHIKDTQSQDSYSR 659
Query: 845 DFELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDI 904
+NSGK++ L ++L I EKV+V S +TQ LDI
Sbjct: 660 S-----------------------LNSGKLKVLMTLLEGIRKGTKEKVVVVSNYTQTLDI 696
Query: 905 LEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKAGGFGINLVCANNVI 964
+E +++ + RLDG R S++ F + I FLLS K+GG G+NLV + +I
Sbjct: 697 IENLMNMAGMSHCRLDGSIPAKQRDSIVTSFNRNPAIFGFLLSAKSGGVGLNLVGRSRLI 756
Query: 965 IFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKIL--HLAKNKLALDTHISQ 1022
+FD +NP D QA R HR GQ K + L++ I+EKIL L KN L+ +
Sbjct: 757 LFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKILQRQLMKNSLS-QKFLGD 815
Query: 1023 EDKKNEEA 1030
+ +N+E+
Sbjct: 816 SEMRNKES 823
>At3g12810 [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 1048
Score = 190 bits (483), Expect = 9e-48
Identities = 113/305 (37%), Positives = 170/305 (55%), Gaps = 16/305 (5%)
Query: 502 LKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHHN-GPHLVVVPSS 560
L++YQ G++WL +Y+ L+ ILADEMGLGKT I+ LA+L GPHL+VVP+S
Sbjct: 121 LREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACDKGIWGPHLIVVPTS 180
Query: 561 TLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQYDVIVTTYNLAAGTKYDVS 620
+ NW EF K+CP K+ Y+GS +ER +L+ + V +TTY L D
Sbjct: 181 VMLNWETEFLKWCPAFKILTYFGSAKER-KLKRQGWMKLNSFHVCITTYRLVI---QDSK 236
Query: 621 FLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIM 680
+ + + ++ DE H++KN S+R+ L+ N+ R+LLTGTPLQN+L EL SL+ F+M
Sbjct: 237 MFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLM 296
Query: 681 PNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQVLKHL 740
P++F S ++ + + N + I+R +++PF+LRR K V K L
Sbjct: 297 PHVFQSHQEFKDWFCNPIAGMVEGQEKIN----KEVIDRLHNVLRPFLLRRLKRDVEKQL 352
Query: 741 PRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSKNLIMALRKASI 800
P KH H++ C +++ Q+ LY+ I E + + G S +IM LRK
Sbjct: 353 PSKHEHVIFCRLSKRQRNLYEDFIAST-ETQATLTSGSFFGMIS------IIMQLRKVCN 405
Query: 801 HPLLF 805
HP LF
Sbjct: 406 HPDLF 410
Score = 130 bits (327), Expect = 1e-29
Identities = 69/158 (43%), Positives = 101/158 (63%), Gaps = 1/158 (0%)
Query: 872 GKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSL 931
GK+++L +L K+ H + L+F+ T++LD+LE ++ ++RLDG T +RQ+L
Sbjct: 660 GKLQELAMLLRKLKFGGH-RALIFTQMTKMLDVLEAFINLYGYTYMRLDGSTPPEERQTL 718
Query: 932 IDRFYEDDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEV 991
+ RF + I +F+LST++GG GINLV A+ VI +D +NP D+QA DR HR+GQT+EV
Sbjct: 719 MQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 778
Query: 992 QVTTLISRDTIEEKILHLAKNKLALDTHISQEDKKNEE 1029
+ LIS TIEE IL A K LD + Q + N E
Sbjct: 779 HIYRLISESTIEENILKKANQKRVLDNLVIQNGEYNTE 816
>CE11028 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains
SNF2 family DNA-dependent ATPase domain)
Length = 1785
Score = 187 bits (476), Expect = 6e-47
Identities = 156/538 (28%), Positives = 247/538 (44%), Gaps = 111/538 (20%)
Query: 501 ELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQT---HHN----GPH 553
+L +QQ G+ WL + ILADEMGLGKT Q + FL +++T H+
Sbjct: 193 KLHKFQQEGVEWLQKKTDHRSGGILADEMGLGKTIQSVVFLRSIQETARTHYKTTGLDTA 252
Query: 554 LVVVPSSTLENWLREFNKFCPHLKV------------EPYYGSQQERAELRDILEENEGQ 601
L+V S + W++E N++ P +V E Y GS + + R E +G
Sbjct: 253 LIVCHVSIIAQWIKELNQWFPKARVFLLHSHCSTGRQEDYVGSIFRKLQRRR-KEYPDGA 311
Query: 602 YDVIVTTYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLT 661
+I+TTY+L K + + VV+ DEGH ++N ++ + K+ R +LT
Sbjct: 312 --IILTTYSLFTKLKKPIV---KHLWQVVILDEGHYIRNENTKCSIAMRKLMTTQRFILT 366
Query: 662 GTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYN--PLLAEHAIER 719
GTP QN L E L++F+ P + D AT + T +A N P A A E
Sbjct: 367 GTPFQNRLSEFWKLVDFVHP----GRLSDSATFHRNFTHIINAGANLNCSPEAAAKAYEC 422
Query: 720 AKTM---MKPFILRRKKD--QVLKHLPRKHNHILHCEMTELQKTLYQQ-----EIKQVME 769
+ +KP ILRR ++ + + LP K +L CE+++ Q+ LY + ++ +++E
Sbjct: 423 LVALHIAVKPLILRRLQEDHKEVLQLPEKQEIVLSCELSKRQRRLYMEYGNSHQVNEIIE 482
Query: 770 HRRKIKEGVKMEKASRNVSKNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEY-- 827
R K G+ L HP ++R + P++
Sbjct: 483 RRLKAFVGIN--------------HLTNICNHPGIYRSL------------SPASPKFGS 516
Query: 828 -YENGNIEYIKEDMSYMTDFELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIID 886
++G +E MT FKL D+W S
Sbjct: 517 IKDSGKVE--------MT----------------FKL-FDDWFKS--------------- 536
Query: 887 IQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLL 946
+V++F+ V+ ++E+ L+ IK + L G R +I +F +D +I VFL+
Sbjct: 537 -PTNRVILFTQRRTVITMMEYFLAEKGIKCVSLTGADSAAARPKIIKKFEDDVSIKVFLM 595
Query: 947 STKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEE 1004
+T+AGG G+NL CAN VIIFD +NP D QA +R +R+GQT +V + L+S TIE+
Sbjct: 596 TTRAGGLGLNLTCANKVIIFDPDWNPQADNQAKNRIYRMGQTNDVAIYRLVSNGTIED 653
Score = 53.5 bits (127), Expect = 2e-06
Identities = 35/136 (25%), Positives = 64/136 (46%), Gaps = 1/136 (0%)
Query: 870 NSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQ 929
+SGKV + +L + KV++F+ QV +LE + I + DR+
Sbjct: 1388 DSGKVRIVFQLLDMWLGTPGAKVVIFTQRRQVAVMLEHFMKQKRIAYCSFLKAKNAYDRE 1447
Query: 930 SLIDRFYEDDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDD-RQAADRAHRVGQT 988
++++ F + + L + G+ L AN VIIFD +NP D + + + +
Sbjct: 1448 NVVNYFENTTDVQILLAPSIMFKLGMQLKKANKVIIFDPEWNPDSDVKHTREMSFLTKKV 1507
Query: 989 KEVQVTTLISRDTIEE 1004
++V V L+S T+E+
Sbjct: 1508 EDVTVVRLVSEGTVED 1523
>CE25143 [L] KOG0390 DNA repair protein SNF2 family
Length = 818
Score = 187 bits (475), Expect = 7e-47
Identities = 155/534 (29%), Positives = 254/534 (47%), Gaps = 60/534 (11%)
Query: 523 CILADEMGLGKTCQVISFL-AYLKQTHHNGP----HLVVVPSSTLENWLREFNKFC-PHL 576
CI+ADEMGLGKT Q IS L L+Q+ P ++V PSS ++NW +E K+ L
Sbjct: 228 CIMADEMGLGKTLQCISLLWTLLRQSPDACPTVSKSIIVCPSSLVKNWDKEIKKWLGTRL 287
Query: 577 KVEPYYGSQQER--AELRDILEENEGQYDVIVTTYNLAAGTKYDVSFLRNRNFDVVVYDE 634
P ++E+ A L + +++ + + V + Y + L + + +V+ DE
Sbjct: 288 NAMPVDSGKREQIIACLNSFMADSKMRCAIPVLIISYETFRLY-ANILHSGDVGIVICDE 346
Query: 635 GHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATV 694
GH LKNS + + L + R+L++GTP+QN+L E SL+ F+ P L + +
Sbjct: 347 GHRLKNSENLTYQALSGLKCARRVLISGTPIQNDLLEYFSLVNFVNPGLLGTASEFRKKF 406
Query: 695 FKQKTRTSDAD-KGYNPLLAEHAIERAKTMMKPFILRRKKDQVLKHLPRKHNHILHCEMT 753
+ DAD + E + ++++ I+RR + K+LP K+ HI+ C+ +
Sbjct: 407 ENAILKGRDADASSEDQKKGEEKTKEMISLVEKCIIRRTSALLTKYLPVKYEHIICCKNS 466
Query: 754 ELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSKNLIMALRKASIHPLLFRHIYNDXX 813
LQ+TLY + I+ ++R V+ +K + + + I L+K HP L +Y+
Sbjct: 467 TLQETLYNKLIECEKQNRI-----VEKDKGATASALSFITHLKKLCNHPYL---VYD--- 515
Query: 814 XXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFELHKLCCKFPSLYKFKLQSDEWMNSGK 873
E+ K D + +K FP F +S + SGK
Sbjct: 516 --------------------EFQKPDNRFR-----NKCLSIFPE--SFNPKSFDPSFSGK 548
Query: 874 VEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLID 933
++ L +L +K ++ S +TQ +D + F+RLDG + R ++D
Sbjct: 549 MKVLDYILAVTRKTTDDKFVLVSNYTQTIDQFMELCKLRGYDFVRLDGSMSIKQRSKIVD 608
Query: 934 RFYED-DTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQ 992
F + TI FLLS+KAGG G+NL+ AN +++FD +NP +D QA R R GQ K
Sbjct: 609 TFNDPASTIFCFLLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKMCF 668
Query: 993 VTTLISRDTIEEKILHLAKNKLALDT-----------HISQEDKKNEEALENKV 1035
+ L++ +IEEK+ +K AL + H S E + LE+ V
Sbjct: 669 IYRLLATGSIEEKMFQRQTHKKALSSCVVDAGEDVARHFSSEQLRELFKLESTV 722
>7295868 [L] KOG0390 DNA repair protein SNF2 family
Length = 784
Score = 186 bits (471), Expect = 2e-46
Identities = 176/573 (30%), Positives = 276/573 (47%), Gaps = 82/573 (14%)
Query: 502 LKDYQQTGINWLHLLYQ----NDLSCILADEMGLGKTCQVISFL-AYLKQTHHNGPHL-- 554
L+ +Q+ G+ +++ + N CI+ADEMGLGKT Q ++ + L+Q P +
Sbjct: 156 LRPHQREGVRFMYECVEGKRGNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINK 215
Query: 555 --VVVPSSTLENWLREFNKFCP-HLKVEPYYGSQQERA----ELRDILEENEGQYDVIVT 607
VV PSS ++NW +EF K+ L P G +E E + G ++++
Sbjct: 216 AIVVSPSSLVKNWEKEFTKWLHGRLLCLPMEGGTKENTIRALEQFSMTSARLGTPVLLIS 275
Query: 608 --TYNLAAGT--KYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGT 663
T+ + A KY+V +V+ DEGH LKNS + + LM + R+LL+GT
Sbjct: 276 YETFRIYAEILCKYEVG--------MVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGT 327
Query: 664 PLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERA--K 721
P+QN+L E SL+ F+ P + + A VFK+ ++ +G N E +RA K
Sbjct: 328 PIQNDLTEYYSLVNFVNPEMLGT-----AAVFKRNFESAIL-RGQNTDSTEQERQRAIEK 381
Query: 722 T-----MMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKE 776
T ++ I+RR + K+LP K ++ ++T +Q LY +K + RR + +
Sbjct: 382 TQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTAIQLELYTNFLKSD-QVRRSLAD 440
Query: 777 GVKMEKASRNVSKNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYI 836
EKAS + I L+K HP L IY E + + N+
Sbjct: 441 C--NEKASLTALAD-ITTLKKICSHPDL---IYEKLTAR--------EKGFENSQNV--- 483
Query: 837 KEDMSYMTDFELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFS 896
PS YK K + E SGK L +L I ++KV++ S
Sbjct: 484 ------------------LPSNYKPKDLNPEL--SGKFMLLDFMLAAIRAEGNDKVVLIS 523
Query: 897 LFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIP-VFLLSTKAGGFGI 955
+TQ LD+ E + F+RLDG + R ++DRF + ++ +F+LS+KAGG G+
Sbjct: 524 NYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGL 583
Query: 956 NLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLA 1015
NL+ AN + +FD +NP +D QA R R GQ K + L++ +IEEKIL +K +
Sbjct: 584 NLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKS 643
Query: 1016 LDTHISQEDKKNEEALENKVTDLLEDII-FDEN 1047
L + I NE A ++ D L+D+ FD N
Sbjct: 644 LSSTIID---NNESAEKHFTRDDLKDLFTFDAN 673
>At3g19210 [L] KOG0390 DNA repair protein SNF2 family
Length = 688
Score = 180 bits (456), Expect = 1e-44
Identities = 151/527 (28%), Positives = 237/527 (44%), Gaps = 65/527 (12%)
Query: 523 CILADEMGLGKTCQVISFLAYLKQTHHNGPHLV-----VVPSSTLENWLREFNKFCPHLK 577
CILAD+MGLGKT Q I+ L L +G +V V P+S + NW E K+ +
Sbjct: 103 CILADDMGLGKTLQSITLLYTLLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIKKWVGD-R 161
Query: 578 VEPYYGSQQERAELR---DILEENEGQYDVIVTTYNLAAGTKYDVSFLRNRNFDVVVYDE 634
++ + R ++ D V++ +Y + F ++ + D+++ DE
Sbjct: 162 IQLIALCESTRDDVLSGIDSFTRPRSALQVLIISYETFR--MHSSKFCQSESCDLLICDE 219
Query: 635 GHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKD----- 689
H LKN + L + R+LL+GTP+QN+L+E +++ F P
Sbjct: 220 AHRLKNDQTLTNRALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRHYY 279
Query: 690 DLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQVLKHLPRKHNHILH 749
+ + ++ ++ +K L A+ + E + + + FILRR + HLP K ++
Sbjct: 280 EAPIICGREPTATEEEKN---LAADRSAELS-SKVNQFILRRTNALLSNHLPPKIIEVVC 335
Query: 750 CEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSKNLIMALRKASIHPLLFRHIY 809
C+MT LQ TLY I +R + + K K ++ AL+K HP L IY
Sbjct: 336 CKMTTLQSTLYNHFISS-KNLKRALADNAKQTKVLAYIT-----ALKKLCNHPKL---IY 386
Query: 810 NDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFELHKLCCKFPSLYKFKLQSDEWM 869
+ IK FE C +F F +S W
Sbjct: 387 DT------------------------IKSGNPGTVGFEN---CLEFFPAEMFSGRSGAWT 419
Query: 870 N--------SGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDG 921
SGK+ L +L + +++++ S +TQ LD+ + FLRLDG
Sbjct: 420 GGDGAWVELSGKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDG 479
Query: 922 QTQVNDRQSLIDRFYEDDTIP-VFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAAD 980
T ++ RQ L++R + FLLS+KAGG G+NL+ AN +++FD +NP +D+QAA
Sbjct: 480 STTISKRQKLVNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAA 539
Query: 981 RAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQEDKKN 1027
R R GQ K V V +S TIEEK+ +K L I E N
Sbjct: 540 RVWRDGQKKRVYVYRFLSTGTIEEKVYQRQMSKEGLQKVIQHEQTDN 586
>At1g08600 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 1447
Score = 172 bits (435), Expect = 3e-42
Identities = 171/612 (27%), Positives = 266/612 (42%), Gaps = 86/612 (14%)
Query: 497 SSDVELKDYQQTGIN--WLHLLYQ--------NDLSCILADEMGLGKTCQVISFLAYLKQ 546
S +LK +Q TGI W +++ L CILA MGLGKT QVI+FL +
Sbjct: 682 SISAKLKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMR 741
Query: 547 THHNG--PHLVVVPSSTLENWLREFNKFCPHLKVEPYY------GSQQERAELRDILEEN 598
G L+V P + L NW EF K+ P +V+P S++ R +L +
Sbjct: 742 CVDLGLKTALIVTPVNVLHNWRSEFEKWMPS-EVKPLRIFMLGDVSRERRFDLLTKWRKK 800
Query: 599 EGQYDVIVTTY---NLAAGTKYDVSFLRN------RNFDVVVYDEGHMLKNSMSERFNKL 649
G + + T + +L G K D++ R D++V DE H++KN+ ++ L
Sbjct: 801 GGVFLMGYTNFRNLSLGRGVK-DLNAARGICNALRDGPDILVCDEAHIIKNTKADTTQAL 859
Query: 650 MKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYN 709
++ R+ LTG+PLQNNL E +++F+ F+ + F+ + N
Sbjct: 860 KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREG-FLGSSPEFRNRFQNPIENG---QHMN 915
Query: 710 PLLAEHAIERAKT-----MMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEI 764
+ I ++ +K F+ R + V K LP K ++ +++ LQ+ LYQ+ +
Sbjct: 916 STAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRILYQRFL 975
Query: 765 KQVMEHRRKIKEGVKMEKASRNVSKNLIMA---LRKASIHPLLFRHIYNDXXXXXXXXXX 821
+ G + + KN A L + HP + + D
Sbjct: 976 ELY---------GFSDGRTDERMRKNFFAAYQVLAQILNHPGIPQLRSEDSKNGRRGSIV 1026
Query: 822 XXEPEYYENGNIEYIKEDMSYMTDFELHKLCCKFPSLYKFKLQSDEWMN----------- 870
+ + NI+Y M E + LQ D W++
Sbjct: 1027 DIPDDCSSDENIDY------NMVTGEKQRTMNDLQDKVDGYLQKDWWVDLLQKNNYKVSD 1080
Query: 871 -SGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTL------------NIKFL 917
SGK+ L +L D+ +K LVFS LD++E LS + +
Sbjct: 1081 FSGKMILLLDILSMSADVG-DKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWY 1139
Query: 918 RLDGQTQVNDRQSLIDRFYEDDT--IPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDD 975
R+DG+T+ ++RQ L+DRF E D + L+ST+AG GINL AN VII D S+NP D
Sbjct: 1140 RIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYD 1199
Query: 976 RQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQEDKKNEEALENKV 1035
QA RA R GQ K V L++R TIEEKI K L + + + + ++
Sbjct: 1200 LQAIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM 1259
Query: 1036 TDLLEDIIFDEN 1047
L E FD++
Sbjct: 1260 LHLFE---FDDD 1268
>SPAC22F3.03c [L] KOG0390 DNA repair protein SNF2 family
Length = 768
Score = 169 bits (428), Expect = 2e-41
Identities = 146/549 (26%), Positives = 245/549 (44%), Gaps = 85/549 (15%)
Query: 502 LKDYQQTGINWLH-----LLYQNDLSCILADEMGLGKTCQVISFL-AYLKQTHHNGPH-- 553
L +Q+ G+++L+ + + S ILADEMGLGKT Q I+ + LKQ+++
Sbjct: 162 LYSHQREGVSFLYDCLLGMEGKCGYSAILADEMGLGKTLQTITVVWTLLKQSYYANRSST 221
Query: 554 ----LVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQ-YDVIVTT 608
+VV P + L+NW EF + H ++ Y E D E + Y +I+T
Sbjct: 222 INNAMVVAPVTLLKNWENEFYNWLGHERIHVYIARCAE-----DFQEFTSNKTYSIIITG 276
Query: 609 YNLAAGTKYDVSFLRNR----NFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTP 664
Y ++LRN + D+++ DE H LK+ S+ + L K+ RLLLTGTP
Sbjct: 277 YETVC------TYLRNYGCGIDIDLLICDEAHRLKSMSSQTWITLNKLKTRKRLLLTGTP 330
Query: 665 LQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPL-LAEHAIERAKTM 723
LQN+L E S++ FI+P + A + R+ + + L ++R
Sbjct: 331 LQNDLSEYFSMVNFIIPGSLGTPNSFKAQYERPILRSRSMNASSRDISLGAARLQRLFEF 390
Query: 724 MKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKA 783
F LRRK + + KHLP + + +L + T Q+ +Y + +G K
Sbjct: 391 TSNFTLRRKANILAKHLPPRTDIVLFIKPTHQQENVYGH-----------VLDGFKSSVD 439
Query: 784 SRNVSKNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYM 843
+ ++ L K +L R N ++ ++
Sbjct: 440 QKGYYLKILTRLSKICNSTILLR-----------------------NEKENFLSTELQDK 476
Query: 844 TDFELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLD 903
FE Q + ++S K++ L ++L K +K ++ S + + L+
Sbjct: 477 HVFE----------------QENMLLSSSKLQILAALL-KSFQRGCQKAVIVSQYKETLE 519
Query: 904 ILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDD--TIPVFLLSTKAGGFGINLVCAN 961
++E LS L+++F +L G T ++R ++ F V LLS+KAGG G+NL +
Sbjct: 520 LIELFLSILHVRFCKLLGSTPFSERDLIVHNFNTSSFKEFSVLLLSSKAGGCGLNLTGST 579
Query: 962 NVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHIS 1021
+II++ S+NP D QA R +R GQ + V + T +S ++E+I K L +
Sbjct: 580 RLIIYEPSWNPAQDLQALSRIYRSGQKRPVCIYTFLSSGMLDERIFIRQNTKQGLSSSFI 639
Query: 1022 QED---KKN 1027
D KKN
Sbjct: 640 DSDASQKKN 648
>CE23323 [L] KOG0390 DNA repair protein SNF2 family
Length = 751
Score = 168 bits (425), Expect = 5e-41
Identities = 138/464 (29%), Positives = 214/464 (45%), Gaps = 73/464 (15%)
Query: 554 LVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQYDVIVTTYNLAA 613
L++VPSS + NW EF+K+ ++ A + +V +Y+LA
Sbjct: 188 LIIVPSSLVNNWKAEFDKWWRLMRFPAVIALT---ANDITTYQSTIKLMPYLVISYDLA- 243
Query: 614 GTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELM 673
+ V L+ FDV+V DEGH LKN + L+ + RL+LTGTP+QN+ +E
Sbjct: 244 --QRHVEKLKIIRFDVMVCDEGHKLKNLDGKLRKTLLSLEIPRRLILTGTPMQNDFEEFY 301
Query: 674 SLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKK 733
SLL+F+ P++F S + + + SD + N L+ E + R
Sbjct: 302 SLLDFVRPSVFGS-------IVEFRKMCSDRPEQLNELIDECMLRRTAA----------- 343
Query: 734 DQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSKNLIM 793
D LKHLP KH +IL C + +QK ++ EI M + +LI
Sbjct: 344 DVDLKHLPEKHEYILFCAASPIQKHVHS-EICDYMT----------------GDALSLIF 386
Query: 794 ALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFELHKLCC 853
R+ + HP L ++ ++E + L
Sbjct: 387 FARQLANHPKLL---------------------------LDNLREKTEKSKAHKHSPLLL 419
Query: 854 KFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLN 913
F + + E SGK+ L ++ K + E ++ S + + LD+++ + LN
Sbjct: 420 AFDGAHMPRGGVKE---SGKLTALVDMI-KCFRLLQECTVIVSNYIETLDMIQQLCEYLN 475
Query: 914 IKFLRLDGQTQVNDRQSLIDRFYED-DTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNP 972
K LRLDG+TQV DRQ L+ F + D +FLLSTKAGG G+NL+ A+ +++FD +NP
Sbjct: 476 FKVLRLDGKTQVPDRQKLVRTFNDHRDPSNIFLLSTKAGGVGLNLIGASRLVLFDSDWNP 535
Query: 973 HDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLAL 1016
+D+QA R R GQ + + LI+ TIEEK+L K L
Sbjct: 536 ANDQQAMARIWRDGQVRPCHIYRLITTGTIEEKMLQRQIKKTGL 579
>SPAC3G6.12 [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 1063
Score = 163 bits (413), Expect = 1e-39
Identities = 88/206 (42%), Positives = 129/206 (61%), Gaps = 12/206 (5%)
Query: 491 QKPKLLSSDVELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHHN 550
++PK+L +LK+YQ G+NWL LY+ ++ ILADEMGLGKT Q IS +AYL +TH+
Sbjct: 833 KQPKMLMC--KLKEYQLKGLNWLANLYEQGINGILADEMGLGKTVQSISVMAYLAETHNI 890
Query: 551 -GPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELR------DILEENEGQYD 603
GP LV+ P+STL NW +E +F P LK PY+GS ++R LR ++ + +
Sbjct: 891 WGPFLVIAPASTLHNWQQEITRFVPKLKCIPYWGSTKDRKILRKFWCRKNMTYDENSPFH 950
Query: 604 VIVTTYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGT 663
V+VT+Y L D + ++ + ++ DE +K+S S R+ L+ RLLLTGT
Sbjct: 951 VVVTSYQLVV---LDAQYFQSVKWQYMILDEAQAIKSSSSSRWKSLLAFKCRNRLLLTGT 1007
Query: 664 PLQNNLKELMSLLEFIMPNLFVSKKD 689
P+QN ++EL +LL FIMP+LF S +
Sbjct: 1008 PIQNTMQELWALLHFIMPSLFDSHNE 1033
>SPBC582.10c [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 830
Score = 160 bits (406), Expect = 7e-39
Identities = 171/618 (27%), Positives = 267/618 (42%), Gaps = 79/618 (12%)
Query: 490 RQKPKLLSSDVELKDYQQTGINWLHLLYQNDLSC----ILADEMGLGKTCQVISFLA--- 542
RQ + + L D+Q G+ WL S ILAD+MGLGKT Q+I+ +
Sbjct: 221 RQSSFIPGMHIRLLDHQVQGLTWLKSRETVSKSSASGGILADDMGLGKTIQMIALILSHP 280
Query: 543 YLKQTHHNGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQY 602
K+ H LVV P S ++ W E L Y+G+ R +L ++ E Y
Sbjct: 281 LPKKKHSIKSTLVVAPLSLIKQWESEVQTKSK-LTAIVYHGAS--RYKLLKVIHE----Y 333
Query: 603 DVIVTTYNL---------AAGTKYDVSFLRNRNFDV------------VVYDEGHMLKNS 641
DV++TTY + GT S ++++ ++ DE H +KN
Sbjct: 334 DVVITTYQILVSEWVSHNTTGTD-GKSPTEAKSYEKKKPSLFAFYWWRIILDEAHTIKNK 392
Query: 642 MSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSK---KDDLATVFKQK 698
S+ + R LTGTPLQNN+ EL SL++F+ N F + KD ++ Q
Sbjct: 393 SSKSALACCALQGINRWCLTGTPLQNNVDELYSLVKFLHINPFNDQSVWKDQISLPLCQG 452
Query: 699 TRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKT 758
K LL+ + R KT+++ + LK L ++ + + C+ E ++
Sbjct: 453 EENL-VFKRLRMLLSVIMLRRTKTLLEANAGKDGTGGALK-LSKRLVYKVICKFEESERD 510
Query: 759 LYQQEIKQVMEHRRKIKEGVKMEKASRNVSKNLIMALRKASIHP--LLFRH-----IYND 811
Y + + K+ K N+ L++ LR+A HP L F+ +N
Sbjct: 511 FYSNLARNMERTMSNFVNSGKLGKNYTNILC-LLLRLRQACNHPQSLNFQFEQDVDAFNA 569
Query: 812 XXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDF----------ELHKLCCK-----FP 856
+ + + N+ E S F + H+ CK F
Sbjct: 570 LDGAANTNKLASDQDVDDLANLLETVEIGSRKKSFCTICMAELPPDFHEKKCKDCSRNFK 629
Query: 857 SLYK-FKLQSDEWM-NSGKVEQLKSVLHKIIDIQHE--------KVLVFSLFTQVLDILE 906
L K + +D+ + S K+ ++ +L +D Q E K ++FS FT LDI++
Sbjct: 630 ELDKGIQDPNDKTLYKSSKIREILKILS--LDEQEEDDTVRGLRKTIIFSQFTTFLDIID 687
Query: 907 FVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKAGGFGINLVCANNVIIF 966
L I F+R DG+ R+ +D D V L S K G G+NL CA+ VI+
Sbjct: 688 LHLRKAGIGFVRYDGRMNNRAREKSLDLLRSDSGTQVLLCSLKCGALGLNLTCASRVILC 747
Query: 967 DQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQEDKK 1026
D +NP + QA DR HR+GQ ++V V L+ +TIEEKI+ L K L + KK
Sbjct: 748 DVWWNPAIEEQAIDRVHRIGQRRDVLVYKLVVENTIEEKIVELQNLKRDLAKQALGDGKK 807
Query: 1027 NEEALENKVTDLLEDIIF 1044
+ K+T L D++F
Sbjct: 808 S-VFTSKKLT--LNDLLF 822
>YBR114w [L] KOG1002 Nucleotide excision repair protein RAD16
Length = 790
Score = 158 bits (399), Expect = 5e-38
Identities = 178/716 (24%), Positives = 291/716 (39%), Gaps = 137/716 (19%)
Query: 402 DVDTYSDDEANETITNDSANVQIIKSSTTSRENSLGPSKRKRNXXXXXXXXXXXXXXXXX 461
D + + DE I ND+ + IK ++ +K+++
Sbjct: 79 DKERTATDENTHAIKNDNDEIIEIKEERDVSDDDEPLTKKRKTTARKK------------ 126
Query: 462 XXXXKPRARTKQKKTSITQLRNNQMKFIRQKPKLLSSDVELKD----------------- 504
K + TK+K +T N ++ P+L + +LK+
Sbjct: 127 ----KKKTSTKKKSPKVTPYERNTLRLYEHHPELRNVFTDLKNAPPYVPQRSKQPDGMTI 182
Query: 505 ----YQQTGINWLHLLYQNDLSC-ILADEMGLGKTCQVISFLAYLKQTHHNGPHLVVVPS 559
+Q G++WL ++ + +LADEMG+GKT Q I A L P LVV P+
Sbjct: 183 KLLPFQLEGLHWLISQEESIYAGGVLADEMGMGKTIQTI---ALLMNDLTKSPSLVVAPT 239
Query: 560 STLENWLREFNKFCP-HLKVEPYYGSQQERAELRDILEENEGQYDVIVTTYNLAA----- 613
L W E + LK+ Y+G+ + +++D+ +G YDV++TTY +
Sbjct: 240 VALMQWKNEIEQHTKGQLKIYIYHGASRT-TDIKDL----QG-YDVVLTTYAVLESVFRK 293
Query: 614 ---------GTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTP 664
G S L N +F V+ DE H +K+ S + + R L+GTP
Sbjct: 294 QNYGFRRKNGLFKQPSVLHNIDFYRVILDEAHNIKDRQSNTARAVNNLKTQKRWCLSGTP 353
Query: 665 LQNNLKELMSLLEFIMPNLFVS---KKDDLATVFKQKTRTSDADKGYNPLLAE------- 714
LQN + E+ SL+ F+ N F K D A+ + T D + ++
Sbjct: 354 LQNRIGEMYSLIRFLNINPFTKYFCTKCDCASKDWKFTDRMHCDHCSHVIMQHTNFFNHF 413
Query: 715 ---------------HAIERAKTMMKPFILRRKKDQVLKHL---PR---KHNHILHCEMT 753
+ +T++K +LRR K + L PR + E
Sbjct: 414 MLKNIQKFGVEGPGLESFNNIQTLLKNIMLRRTKVERADDLGLPPRIVTVRRDFFNEEEK 473
Query: 754 ELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSKNLIMALRKASIHP-LLFRHIYN-- 810
+L ++LY ++ + ++EGV + + + LI +R+ + HP L+ + + N
Sbjct: 474 DLYRSLYTDSKRK---YNSFVEEGVVLNNYANIFT--LITRMRQLADHPDLVLKRLNNFP 528
Query: 811 -DXXXXXXXXXXXXEPEYYENGNIEY------IKEDMSYMTDF--ELHKLCCKF------ 855
D E E + IKE Y+ F +KL C
Sbjct: 529 GDDIGVVICQLCNDEAEEPIESKCHHKFCRLCIKE---YVESFMENNNKLTCPVCHIGLS 585
Query: 856 ---------PSLYKFKLQS--------DEWMNSGKVEQLKSVLHKIIDIQHE-KVLVFSL 897
L FK QS +W +S K+E L L+K+ + K +VFS
Sbjct: 586 IDLSQPALEVDLDSFKKQSIVSRLNMSGKWQSSTKIEALVEELYKLRSNKRTIKSIVFSQ 645
Query: 898 FTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKAGGFGINL 957
FT +LD++E+ L + ++L G R I F + VFL+S KAGG +NL
Sbjct: 646 FTSMLDLVEWRLKRAGFQTVKLQGSMSPTQRDETIKYFMNNIQCEVFLVSLKAGGVALNL 705
Query: 958 VCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNK 1013
A+ V I D +NP + Q+ DR HR+GQ + V++T D+IE +I+ L + K
Sbjct: 706 CEASQVFILDPWWNPSVEWQSGDRVHRIGQYRPVKITRFCIEDSIEARIIELQEKK 761
>SPCC330.01c [L] KOG1002 Nucleotide excision repair protein RAD16
Length = 963
Score = 156 bits (394), Expect = 2e-37
Identities = 164/633 (25%), Positives = 264/633 (40%), Gaps = 119/633 (18%)
Query: 485 QMKFIRQKPKLLSSDVELKDYQQTGINWLHLLYQNDLSC---ILADEMGLGKTCQVISFL 541
++K I Q +L+ + L +Q+ G+ WL Q D S ILADEMG+GKT Q I
Sbjct: 343 EVKQIEQPKELV---LNLLPFQREGVYWLKR--QEDSSFGGGILADEMGMGKTIQTI--- 394
Query: 542 AYLKQTHHNGPHLVVVPSSTLENWLREFNKFCPH-LKVEPYYGSQQERAELRDILEENEG 600
A L P LVV P + W E + L YYG + RDI E
Sbjct: 395 ALLLSEPRGKPTLVVAPVVAIMQWKEEIDTHTNKALSTYLYYG------QARDISGEELS 448
Query: 601 QYDVIVTTYNLAA--------------GTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERF 646
YDV++T+YN+ G + S L F ++ DE H +K+
Sbjct: 449 SYDVVLTSYNVIESVYRKERSGFRRKNGVVKEKSLLHQMEFYRIILDEAHGIKSRTCNTA 508
Query: 647 NKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVS----KKDDLATVFKQKTRTS 702
+ + ++ L+GTPLQN + EL SLL F+ + F + + + ++ R++
Sbjct: 509 RAVCGLRTTRKICLSGTPLQNRIGELFSLLRFLRADPFAYYYCLQCECKSLHWRFSDRSN 568
Query: 703 DADKGYNPLLAEHAIERAKTMMKPF----------ILRRKKDQVLKHLPRKHNHILHCE- 751
+ G+ P+ H M+KP + +K +LKH+ + + +
Sbjct: 569 CDECGHKPM--SHTCYFNAEMLKPIQKFGYEGPGKLAFKKVHSLLKHIMLRRTKLERADD 626
Query: 752 ------MTELQKTLYQQEIKQV-----MEHRRK----IKEGVKMEKASRNVSKNLIMALR 796
+ E++K L+ +E + V M+ +RK + EGV + + N+ + LI +R
Sbjct: 627 LGLPPRVVEVRKDLFNEEEEDVYQSLYMDSKRKFNTYLAEGVVLNNYA-NIFQ-LITRMR 684
Query: 797 KASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFELHKLCCKF- 855
+ + HP L + E EN + E + H C+
Sbjct: 685 QMADHPDLV----------LASKRKTVDIENQENIVCKICDEVAQDAIESRCHHTFCRLC 734
Query: 856 ----------------PSLY------------------KFK-------LQSDEWMNSGKV 874
PS + KFK + + W +S K+
Sbjct: 735 VTEYINAAGDGENVNCPSCFIPLSIDLSAPALEDFSEEKFKNASILNRIDMNSWRSSTKI 794
Query: 875 EQLKSVLHKIIDIQHE-KVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLID 933
E L L+ + K +VFS FT +LD++ + L ++LDG R + I+
Sbjct: 795 EALVEELYLLRKKDRTLKSIVFSQFTSMLDLIHWRLRKAGFNCVKLDGGMTPKARAATIE 854
Query: 934 RFYEDDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQV 993
F D I +FL+S KAGG +NL A+ V + D +N QA DR HR+GQ + ++V
Sbjct: 855 AFSNDINITIFLVSLKAGGVALNLTEASQVFMMDPWWNGAVQWQAMDRIHRIGQKRPIKV 914
Query: 994 TTLISRDTIEEKILHLAKNKLALDTHISQEDKK 1026
TL ++IE KI+ L + K + +D+K
Sbjct: 915 ITLCIENSIESKIIELQEKKAQMIHATIDQDEK 947
>CE14110 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 1026
Score = 153 bits (387), Expect = 1e-36
Identities = 168/635 (26%), Positives = 271/635 (42%), Gaps = 147/635 (23%)
Query: 500 VELKDYQQTGINWLHLLY-QNDLSCILADEMGLGKTCQVISFLAYLKQTHH--------- 549
VEL +Q+ G+ WL Q ILAD+MGLGKT ++S + + K
Sbjct: 387 VELMPHQKAGLRWLVWREGQPHSGGILADDMGLGKTLSMLSLIVHQKAARRARKESGDNA 446
Query: 550 -----------------NGPHLVVVPSSTLENWLREFNKFCPH--LKVEPYYGSQQERAE 590
NG L++ P+S + W E N+ L V ++G++++R
Sbjct: 447 ADKEKRRVAKEEGLYPSNGT-LIIAPASLIHQWEAEINRRLESDLLSVFMFHGTKKQR-- 503
Query: 591 LRDILEENEGQYDVIVTTYNLAA---------GTKYDV--------------------SF 621
I + +YDV++TTY LAA G+K + S
Sbjct: 504 --QIEPKELARYDVVITTYTLAANELMEKKAAGSKKEEDSDDESENEENPRRPAGKNDSP 561
Query: 622 LRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMP 681
L + V+ DE H +KN +S+ + ++++ R L+GTP+ NNL +L SL+ F+
Sbjct: 562 LARVAWSRVILDEAHAIKNRLSQCSKAVCRLSSFSRWCLSGTPIHNNLWDLYSLVRFLRI 621
Query: 682 NLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQV----- 736
LF +K ++ KT +D R + K +LRR KDQ
Sbjct: 622 PLFGDRKFWAESIMPMKTGMAD---------------RVNLLTKNLMLRRTKDQQCALTN 666
Query: 737 --LKHLPRKHNHILHCEMTELQKTLY-------QQEIKQVMEH----------RRKIKEG 777
+ +L K I EM + Y Q+ +KQ++ + RR+ + G
Sbjct: 667 KKIVNLKEKKIEIHELEMVGDEANGYAIMMEAAQKLVKQIVTNTDDIQKYGQIRRRRQRG 726
Query: 778 VKMEKAS------RNVSKN-----------LIMALRKASIHPLLFRHIYNDXXXXXXXXX 820
E A+ RN++ N L+M LR+A +H HI
Sbjct: 727 NDDEFANPYNVGPRNLAGNSNFQNMSCILLLLMRLRQACVH----FHITKSGMDLDAFKI 782
Query: 821 XXXEPEYYENGNIEYIKED-MSYMT---------DFELHKLCCKFPSLYKFKLQSDEWMN 870
+ E + +E + E M+ +T + +K K P F+
Sbjct: 783 NGGDDEDADMKELENLMEKTMADLTIADSDNDEEGVDTNKEEPKQPPTRIFEPDFISCKM 842
Query: 871 SGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQS 930
+ +E ++ +L K EKV++ S +T VL+++E + + + GQ V DRQ
Sbjct: 843 AKTLEVVREILEK-----KEKVVIVSQWTSVLNLVEKHIQAGGHNYTSITGQVLVKDRQE 897
Query: 931 LIDRF-YEDDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTK 989
+D F E V LLS AGG G+NL+ N++I+ D +NP ++QA DR +R+GQ K
Sbjct: 898 RVDSFNQEKGGAQVMLLSLTAGGVGLNLIGGNHLIMVDLHWNPALEQQACDRIYRMGQKK 957
Query: 990 EV--------QVTTLISRDTIEEKILHLAKNKLAL 1016
EV + LI + TIE++++ L + KLAL
Sbjct: 958 EVFIHRLNISKFCRLIVKGTIEQRVMDLQEKKLAL 992
>CE11083 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 1091
Score = 153 bits (386), Expect = 2e-36
Identities = 158/656 (24%), Positives = 280/656 (42%), Gaps = 141/656 (21%)
Query: 500 VELKDYQQTGINWLHLLY-QNDLSCILADEMGLGKTCQVISFLAYLKQTHH--------- 549
+EL +Q+ G+ W+ Q ILAD+MGLGKT +IS +A+ K
Sbjct: 469 LELMPHQKAGLTWMRWRETQPQPGGILADDMGLGKTLSMISLIAHQKAARRARREDGNDD 528
Query: 550 -----------------NGPHLVVVPSSTLENWLREFNKFCPHLKVEPY--YGSQQERAE 590
NG L+V P+S + W E ++ + Y +G++++R
Sbjct: 529 KDKEKRKVVKEQGLIPSNGT-LIVAPASLIHQWDAEIDRRLDDSVLSTYMFHGTKKQR-- 585
Query: 591 LRDILEENEGQYDVIVTTYNLAAG-------TKY-----------------------DVS 620
DI +YDV++TT+NL A TK D S
Sbjct: 586 --DIDARRLARYDVVITTFNLIANELIEKIRTKSKADDSSDGESDSNHTGIRRAVGKDDS 643
Query: 621 FLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIM 680
L + V+ DE H +KN S + +++A R L+GTP+ NNL +L SL+ F+
Sbjct: 644 VLAQICWSRVILDEAHTIKNRQSLASKAVCRLSAFSRWCLSGTPIHNNLWDLYSLVRFLR 703
Query: 681 PNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQV---- 736
F K ++ K P++A+ R + K +LRR KDQ
Sbjct: 704 IRPFSDDKYWKESIMPMK-----------PIMAD----RVNLLTKNLLLRRTKDQTCAVT 748
Query: 737 ---LKHLPRKHNHILHCEMT-------ELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRN 786
L LP K+ + E+ E+ ++ +K++++ +K + + +R
Sbjct: 749 NQKLVQLPPKNVEVHELELDGDEAQAYEIMMEAAKKFVKKLLQDSNDMKNHGFIPRRNRR 808
Query: 787 VSKN----------------------------LIMALRKASIHPLLFRHIYNDXXXXXXX 818
K L++ LR+A +H + +
Sbjct: 809 AGKEGEVQNPFNFGPRDLAAGSNFEKMSCVLMLLLRLRQACVHFNITK------TGVDMD 862
Query: 819 XXXXXEPEYYENGNIEYIKEDMSYMTDFELHKLCCKFPSLYKFKLQS-----DEWMNSGK 873
+ E N++ D++ + + ++ + + K ++ D S K
Sbjct: 863 AFSLIGGDNAEEANVD----DLNELLEKTMNMTLGNGDNEERDKPRATTRIFDPDYLSCK 918
Query: 874 VEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLID 933
++ ++ I++ + EKV++ S +T VL+++E + + K+ + GQ V DRQ +D
Sbjct: 919 IKNTLEIVENIME-KKEKVVIVSQWTSVLNLIEIHIKSSGFKYTSITGQVLVKDRQERVD 977
Query: 934 RFY-EDDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQ 992
F E V LLS AGG G+NL N++++ D +NP ++QA DR +R+GQ K+V
Sbjct: 978 SFNREKGGARVMLLSLAAGGVGLNLTGGNHLVMVDLHWNPALEQQAFDRIYRMGQKKDVF 1037
Query: 993 VTTLISRDTIEEKILHLAKNKLALDTHISQEDKKNEEALENKVTDLLEDIIFDENQ 1048
+ L+++ TIE++++ L K+K+AL + + N NK+T ++F N+
Sbjct: 1038 IHRLVTKGTIEQRVVMLQKDKVALASSVLD---GNATRKMNKLTTADIKMLFGLNE 1090
>7300511 [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 1477
Score = 153 bits (386), Expect = 2e-36
Identities = 108/348 (31%), Positives = 167/348 (47%), Gaps = 36/348 (10%)
Query: 466 KPRARTKQKKTSITQLRNNQMKFIRQKPKLLSSDVELKDYQQTGINWLHLLYQNDLSCIL 525
K + +Q + S+ ++ ++ P+ LK YQ G+ WL +Y +S IL
Sbjct: 499 KEKEEEEQAQESVEDIKPEPRPEMKDLPQPKMFKGTLKGYQIKGMTWLANIYDQGISGIL 558
Query: 526 ADEMGLGKTCQVISFLAYLKQTHHNGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQ 585
ADEMGLGKT Q I+FL ++ + + F P KV PY+GS
Sbjct: 559 ADEMGLGKTVQSIAFLCHIAE---------------------HYGVFVPDFKVVPYWGSP 597
Query: 586 QERAELRDI-----LEENEGQYDVIVTTYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKN 640
ER LR L + + V++T+Y L D + + +V DE +K+
Sbjct: 598 AERKILRQFWDQKHLHTRDASFHVVITSYQLVVS---DYKYFNRIKWQYMVLDEAQAIKS 654
Query: 641 SMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTR 700
+ S+R+ L+ + RLLL+GTP+QN++ EL +LL FIMP LF S D+ F +
Sbjct: 655 AASQRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPTLFDS-HDEFNEWFSKDIE 713
Query: 701 TSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLY 760
+ +K + E I R ++KPF+LRR K V L K +++C +T QK LY
Sbjct: 714 SHAENK---TGIDEKQISRLHMILKPFMLRRIKKDVENELSDKIEIMVYCPLTIRQKLLY 770
Query: 761 QQEIKQV-MEHRRKIKEGVKMEKASRNVSK--NLIMALRKASIHPLLF 805
+ +++ +E + G +S + S NL+M RK HP LF
Sbjct: 771 RALKQKIRIEDLLHLTSGSTTTSSSSSASNLMNLVMQFRKVCNHPELF 818
Score = 61.2 bits (147), Expect = 8e-09
Identities = 33/94 (35%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
Query: 870 NSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQ 929
++GK+ L ++L ++ H +VL++S T+++D+LE + +++RLDG ++++ R+
Sbjct: 1085 DAGKLFVLDNLLTRLKANGH-RVLIYSQMTKMIDLLEEYMWHRKHRYMRLDGSSKISARR 1143
Query: 930 SLIDRFYEDDTIPVFLLSTKAGGFGINLVCANNV 963
++ F I VFLLST+AGG GINL A+ +
Sbjct: 1144 DMVADFQTRADIFVFLLSTRAGGLGINLTAADTL 1177
>At1g02670 [L] KOG1002 Nucleotide excision repair protein RAD16
Length = 678
Score = 152 bits (385), Expect = 2e-36
Identities = 140/536 (26%), Positives = 236/536 (43%), Gaps = 40/536 (7%)
Query: 500 VELKDYQQTGINWLHLLYQNDLSC----ILADEMGLGKTCQVISFLAYLKQTHHN----- 550
+ L YQ+ + W + +LS ILADEMG+GKT Q IS + ++
Sbjct: 132 IPLLKYQKEFLAWATI---QELSAVRGGILADEMGMGKTIQAISLVLARREVDRAKSREA 188
Query: 551 -GPHLVVVPSSTLENWLREFNKFCP--HLKVEPYYGSQQERAELRDILEENEGQYDVIVT 607
G LV+VP L WL E ++ +V Y+G ++++ ++ ++ YD ++T
Sbjct: 189 VGHTLVLVPPVALSQWLDEISRLTSPGSTRVLQYHGPKRDK-NVQKLMN-----YDFVLT 242
Query: 608 T-------YNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLL 660
T Y G +S L + ++ ++ DE H +KN S + + A +R L
Sbjct: 243 TSPIVENEYRKDEGVDETMSPLHSIKWNRIIVDEAHDIKNRSSRTAKAVFALEATYRWAL 302
Query: 661 TGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERA 720
+GTPLQN++ EL SL+ + N F S A F+ T + L+ + + +
Sbjct: 303 SGTPLQNDVDELYSLVSYSFLNFFYSTYASFA--FRHTHITFARNVTVKFLIGGNILPLS 360
Query: 721 KTMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKM 780
+ + Q+ L K L + ++LY+ + I+ G M
Sbjct: 361 IPVRIENVPAVLIMQINTSLGGKRRDALSVVEADFYESLYKVSKTTFDGY---IQAGTLM 417
Query: 781 EKASRNVSKNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPE--YYENGNIEYIKE 838
+ L++ LR+A HP L + E E + + + +Y
Sbjct: 418 NNYAHIFG--LLIRLRQAVDHPYLVSYSSPSGANANLLDANKNEKECGFGHDPSKDYFVT 475
Query: 839 DMSYMTDFELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHE-KVLVFSL 897
+ KL S ++ D++ S K+E L+ + +++ K +VFS
Sbjct: 476 SSEHQASKT--KLKGFRASSILNRINLDDFKTSTKIEALREEIRFMVERDWSAKAIVFSQ 533
Query: 898 FTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKAGGFGINL 957
FT LD++ + L + ++L G + + + F E+ V L+S +AGG +NL
Sbjct: 534 FTSFLDLISYALGKSGVSCVQLVGSMSKAAKDAALKNFKEEPDCRVLLMSLQAGGVALNL 593
Query: 958 VCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNK 1013
A++V + D +NP +RQA DR HR+GQ K V+V I T+EEKIL L K K
Sbjct: 594 TAASHVFMMDPWWNPAVERQAQDRIHRIGQCKPVRVVRFIMEKTVEEKILTLQKKK 649
>Hs15805014 [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 3124
Score = 141 bits (356), Expect = 5e-33
Identities = 92/267 (34%), Positives = 146/267 (54%), Gaps = 17/267 (6%)
Query: 502 LKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHHN-GPHLVVVPSS 560
L+DYQ+ G++WL LY+ +L+ ILADE GLGKT Q+I+F A+L N GPHLVVV S
Sbjct: 1055 LRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVVRSC 1114
Query: 561 TLENWLREFNKFCPHLKVEPYYGSQQE-RAELRDILEENEGQYDVIVTTYNLAAGTKYDV 619
+ W E ++CP LK+ Y GS +E +A+ ++ E N + V +T+Y +
Sbjct: 1115 NILKWELELKRWCPGLKILSYIGSHRELKAKRQEWAEPN--SFHVCITSY--TQFFRGLT 1170
Query: 620 SFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFI 679
+F R R + +V DE +K + + + + RLLL +PL N EL +++ F+
Sbjct: 1171 AFTRVR-WKCLVIDEMQRVKGMTERHWEAVFTLQSQQRLLLIDSPLHNTFLELWTMVHFL 1229
Query: 680 MPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQVLKH 739
+P + + L++ + + S D + ++ H + +PFILRR K V K
Sbjct: 1230 VPGI---SRPYLSSPLRAPSEESQ-DYYHKVVIRLHRV------TQPFILRRTKRDVEKQ 1279
Query: 740 LPRKHNHILHCEMTELQKTLYQQEIKQ 766
L +K+ H+L C ++ QK LY+ I Q
Sbjct: 1280 LTKKYEHVLKCRLSNRQKALYEDVILQ 1306
Score = 85.1 bits (209), Expect = 5e-16
Identities = 56/185 (30%), Positives = 91/185 (48%), Gaps = 1/185 (0%)
Query: 856 PSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIK 915
P L +F +SGK+E L +L K+ + +VL+ S +LDILE L+ +
Sbjct: 1846 PRLLQFPELRLVQFDSGKLEALAILLQKLKS-EGRRVLILSQMILMLDILEMFLNFHYLT 1904
Query: 916 FLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDD 975
++R+D RQ L+ F D I +LST + GINLV A+ V+ +D NP D
Sbjct: 1905 YVRIDENASSEQRQELMRSFNRDRRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMD 1964
Query: 976 RQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQEDKKNEEALENKV 1035
+A + R+G+ K++ + L+S ++IEEK+L L + D + +
Sbjct: 1965 AKAQEWCDRIGRCKDIHIYRLVSGNSIEEKLLKNGTKDLIREVAAQGNDYSMAFLTQRTI 2024
Query: 1036 TDLLE 1040
+L E
Sbjct: 2025 QELFE 2029
>Hs17437081 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 619
Score = 141 bits (355), Expect = 6e-33
Identities = 68/130 (52%), Positives = 94/130 (72%)
Query: 478 ITQLRNNQMKFIRQKPKLLSSDVELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQV 537
+T L N + ++P +L+ + LK YQ+ G+NWL L++++ L+ ILADEMGLGKT Q
Sbjct: 473 VTMLTGNGGGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQA 532
Query: 538 ISFLAYLKQTHHNGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEE 597
I+FLAYL Q +NGPHL+VVP+ST++NWLRE N +CP LKV YYGSQ+ER ++R +
Sbjct: 533 IAFLAYLYQEGNNGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRFNIHS 592
Query: 598 NEGQYDVIVT 607
Y+VIVT
Sbjct: 593 RYEDYNVIVT 602
>Hs19923174 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 1162
Score = 135 bits (341), Expect = 3e-31
Identities = 146/592 (24%), Positives = 247/592 (41%), Gaps = 104/592 (17%)
Query: 500 VELKDYQQTGINWLHLLY-QNDLSCILADEMGLGKTCQVISFLAYLKQ------------ 546
V L +Q+ + WL Q ILAD+MGLGKT +I+ + K
Sbjct: 568 VPLLLHQKQALAWLLWRESQKPQGGILADDMGLGKTLTMIALILTQKNQEKKEEKEKSTA 627
Query: 547 ------------THHNGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDI 594
T H L++ P+S + +W E K K+ Y R +
Sbjct: 628 LTWLSKDDSCDFTSHGT--LIICPASLIHHWKNEVEKRVNSNKLRVYLYHGPNRDSRARV 685
Query: 595 LEENEGQYDVIVTTYNLAAG---TKYDVSFLRNRNFDV--------------VVYDEGHM 637
L YD+++TTY+L A T + + N +V ++ DE H
Sbjct: 686 LST----YDIVITTYSLVAKEIPTNKQEAEIPGANLNVEGTSTPLLRIAWARIILDEAHN 741
Query: 638 LKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQ 697
+KN + + K+ A R +TGTP+QNNL ++ SLL+F+ + F D +++
Sbjct: 742 VKNPRVQTSIAVCKLQACARWAVTGTPIQNNLLDMYSLLKFLRCSPF-----DEFNLWR- 795
Query: 698 KTRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQV------LKHLPRKHNHILHCE 751
S D G ++ ER + K +LRR KDQ+ L LP++ + H +
Sbjct: 796 ----SQVDNG-----SKKGGERLSILTKSLLLRRTKDQLDSTGRPLVILPQRKFQLHHLK 846
Query: 752 MTELQKTLYQ---QEIKQVMEH--RRKIKEGVKMEKASRNVSKNLIMAL----------- 795
++E ++T+Y + ++ +R G + ++ N + +
Sbjct: 847 LSEDEETVYNVFFARSRSALQSYLKRHESRGNQSGRSPNNPFSRVALEFGSEEPRHSEAA 906
Query: 796 ---RKASIHPLLFRHIYNDXXXXXXXXXXXXEP-EYYENGNIEYIKEDMSYMTDFELHKL 851
R +++H L +P E G + ++E +S +T EL
Sbjct: 907 DSPRSSTVHILSQLLRLRQCCCHLSLLKSALDPMELKGEGLVLSLEEQLSALTLSELRD- 965
Query: 852 CCKFPSLYK------FKLQSDEWMNSGKVEQLKSVLHKIIDIQH----EKVLVFSLFTQV 901
PS FK++ E M ++ S+L ++ IQ +K ++ S +T +
Sbjct: 966 --SEPSSTVSLNGTFFKMELFEGMREST--KISSLLAELEAIQRNSASQKSVIVSQWTNM 1021
Query: 902 LDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKAGGFGINLVCAN 961
L ++ L + + +DG R L++ F V L+S AGG G+NL N
Sbjct: 1022 LKVVALHLKKHGLTYATIDGSVNPKQRMDLVEAFNHSRGPQVMLISLLAGGVGLNLTGGN 1081
Query: 962 NVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNK 1013
++ + D +NP + QA DR +RVGQ K+V + + T+EEKIL L + K
Sbjct: 1082 HLFLLDMHWNPSLEDQACDRIYRVGQQKDVVIHRFVCEGTVEEKILQLQEKK 1133
>ECU03g1530 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1256
Score = 132 bits (333), Expect = 2e-30
Identities = 88/264 (33%), Positives = 141/264 (53%), Gaps = 27/264 (10%)
Query: 500 VELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFL-AYLKQTHHNGPHLVVVP 558
V+L+DYQ G+ WL+ LY L+ ILAD+MGLGKT QV++FL + + +T N LV+ P
Sbjct: 795 VKLRDYQMEGVKWLNFLYSFSLNGILADDMGLGKTLQVLTFLCSEIYKT--NRKVLVICP 852
Query: 559 SSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQYDVIVTTYNLAAGTKYD 618
SS +W E KF P + E Y E+ Y +++++Y + D
Sbjct: 853 SSLTGHWKSEVKKFFPFVAAEIY-------------KREDRDTYSILISSYET---FRND 896
Query: 619 VSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEF 678
+++ VV DEGH+L+N + ++++ I +++LTGTP+ N++++L+SL F
Sbjct: 897 YLNFIEKDWFYVVVDEGHVLRNKQTILYSRMNMIRCSRKMVLTGTPVHNSVEDLISLFNF 956
Query: 679 IMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQVLK 738
+MPN +K+ K S+ +K + L H + PFILRR K VLK
Sbjct: 957 LMPNYIGPEKE--YGSLNVKMSDSEIEKTHKRLDLLH------RKVLPFILRRLKIDVLK 1008
Query: 739 HLPRKHNHILHCEMTELQKTLYQQ 762
LP K + E+ +Q+ LY++
Sbjct: 1009 DLPPKIIRDITVELGPVQEKLYRE 1032
Score = 95.9 bits (237), Expect = 3e-19
Identities = 51/151 (33%), Positives = 88/151 (57%), Gaps = 4/151 (2%)
Query: 891 KVLVFSLFTQVLD-ILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLSTK 949
K+L+F F +D +++ ++ K+ RLDG R + + F T +FL +T+
Sbjct: 1103 KILIFFQFKSTIDLVIKDIMKKYKFKYSRLDGSVPSAARTKIAEEFNTGTTQMLFL-TTQ 1161
Query: 950 AGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHL 1009
GG G+NL A+ V++++ +NP +D QA DRAHR+GQ + V V I+R+T+EEK+++L
Sbjct: 1162 VGGLGLNLTGADTVVMYEHDWNPFNDLQAMDRAHRIGQKRTVNVFRFIARNTLEEKVMNL 1221
Query: 1010 AKNKLALDTHISQEDKKNEEALENKVTDLLE 1040
K+ + + + + E ++ K DLLE
Sbjct: 1222 QSFKMFVANSLVSQQNADIETMDTK--DLLE 1250
>7296236 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 2237
Score = 131 bits (329), Expect = 6e-30
Identities = 141/595 (23%), Positives = 247/595 (40%), Gaps = 68/595 (11%)
Query: 113 RKRLDHIVASRTGGSWRFQSKTNVNPTLNLNKPNSPMDLSKSRLISLKEGGSSGNSIKSN 172
+ LD + G +F KT +L S + + KE +S KS+
Sbjct: 1671 KSELDEATTDKPEGDEKF--KTEGESKKDLTDSEETKLESSAMEVDSKEESEPDDSKKSD 1728
Query: 173 PAINLPSRNVSTSKITIEKQKTSIFDRYSHVMKVSQPSPARSMADRTTMSTIKNLSSKKG 232
N + + K S + S +K + S A +T+ T + +
Sbjct: 1729 ED-NKDKDKMEVDDEVGKSDKESKPEEQSETVKTEENSKAIEEDKSSTVLTADHAKEPET 1787
Query: 233 KLVRGDAIKKKQKIKLSDDEEDEITDQSNDDGELDTEPEYEEKVTESNFDQVLKFLNEAD 292
L + + +K ++D++ ++ D + + EE TE N + L
Sbjct: 1788 VLEKMEVDEK------ANDDQSAVSKAEGSDEKSTDDSNPEEATTEKNKES----LEIEG 1837
Query: 293 PKDLADLGEISIEKAALVIKERPFEDLEQFQQLDFQSKSPSPAPGKARKSQQKKDGLKIL 352
K+ GE S++K + ++ + D ++K P P + K L
Sbjct: 1838 EKERVKEGEESVKK-----------ENDEKTEADMENK-PEPVFIDVEEYFVKYRNFSYL 1885
Query: 353 D----KIEQSIKGYNAIESLIRKCSKYGDVIANQMTNWGVDFSSSKDTELN-ILDVDTYS 407
E+ +KG + + IR+ + N N + + TE++ +LD+ ++
Sbjct: 1886 HCEWRTEEELLKGDRRVAAKIRRFQQKQSQQLNIFENIEDEPFNQDFTEVDRVLDMSVHT 1945
Query: 408 DDEANETITNDSANVQII--KSSTTSRENSLGPSKRKRNXXXXXXXXXXXXXXXXXXXXX 465
D+ + ET + + + + T E + K ++
Sbjct: 1946 DETSGETTKHYLVKWKSLPYEDCTWELEEDVDNDKIEQ---------------YLRFNKI 1990
Query: 466 KPRARTKQKKTSITQLRNNQMKFIRQKPKLLSSDVELKDYQQTGINWLHLLYQNDLSCIL 525
R+ K KK +L +K + L+ YQ G+NWL + N +CIL
Sbjct: 1991 PQRSEWKSKKRPHPELWKKL-----EKTPVYKGGNSLRPYQLEGLNWLKFSWYNTHNCIL 2045
Query: 526 ADEMGLGKTCQVISFLAYLKQTHHNGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQ 585
ADEMGLGKT Q ++F+ + + GP LV+ P ST+ NW REF + + V Y+GS
Sbjct: 2046 ADEMGLGKTIQSLTFVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGW-TDMNVVVYHGSV 2104
Query: 586 QERAELRD-----------ILEENEGQYDVIVTTYNLAAGTKYDVSFLRNRNFDVVVYDE 634
+ ++D +L+E +++V++TT+ + D L+ N+ + V DE
Sbjct: 2105 TSKQMIQDYEYYYKTESGKVLKE-PIKFNVLITTFEMIVTDYMD---LKAFNWRLCVIDE 2160
Query: 635 GHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKD 689
H LKN + L ++N R+LL+GTPLQNN+ EL SLL F+ P+ F S+++
Sbjct: 2161 AHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLEPSQFSSQEE 2215
>Hs13376715 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 336
Score = 127 bits (318), Expect = 1e-28
Identities = 90/288 (31%), Positives = 143/288 (49%), Gaps = 33/288 (11%)
Query: 529 MGLGKTCQVISFLAYLKQTHHNGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQER 588
MGLGKT Q I+FL + T GP L++ P ST+ NW REF + + V Y+GS R
Sbjct: 1 MGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTD-INVVVYHGSLISR 59
Query: 589 AELRDI---LEENEGQ-------YDVIVTTYNLAAGTKYDVSFLRNRNFDVVVYDEGHML 638
++ +++G+ + I+TT+ + G +++ + R V+ DE H L
Sbjct: 60 QMIQQYEMYFRDSQGRIIRGAYRFQAIITTFEMILGGCGELNAIEWR---CVIIDEAHRL 116
Query: 639 KNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQK 698
KN + L +N ++LLTGTPLQN ++EL SLL F+ P F S+ + F Q+
Sbjct: 117 KNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSE-----STFMQE 171
Query: 699 TRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKT 758
+ L E +++ + ++KP +LRR K+ V K L K I+ E+T +QK
Sbjct: 172 ---------FGDLETEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKK 222
Query: 759 LYQQEIKQVMEHRRKIKEGVKMEKASRNVSKNLIMALRKASIHPLLFR 806
Y+ +++ + +G V N +M LRK HP L +
Sbjct: 223 YYRAILEKNFSF---LSKGAGQTNVPNLV--NTMMELRKCCNHPYLIK 265
>At4g31900 [R] KOG0383 Predicted helicase
Length = 1067
Score = 120 bits (301), Expect = 1e-26
Identities = 95/322 (29%), Positives = 154/322 (47%), Gaps = 62/322 (19%)
Query: 730 RRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIK---QVMEHRRKIKEGVKMEKASRN 786
R KKD + +P K IL +M+ QK +Y+ I QV+ +R K
Sbjct: 326 RLKKDVLKDKVPPKKELILRVDMSSQQKEVYKAVITNNYQVLTKKRDAK----------- 374
Query: 787 VSKNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDF 846
N++M LR+ HP L EP + E+ N + K
Sbjct: 375 -ISNVLMKLRQVCSHPYLLPDF---------------EPRF-EDANEAFTK--------- 408
Query: 847 ELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILE 906
L++ SGK++ L ++ K+ + H +VL+++ F L +LE
Sbjct: 409 ---------------LLEA-----SGKLQLLDKMMVKLKEQGH-RVLIYTQFQHTLYLLE 447
Query: 907 FVLSTLNIKFLRLDGQTQVNDRQSLIDRFY-EDDTIPVFLLSTKAGGFGINLVCANNVII 965
+ N + R+DG+ +RQ IDRF E+ FLLST+AGG GINL A+ VII
Sbjct: 448 DYFTFKNWNYERIDGKISGPERQVRIDRFNAENSNRFCFLLSTRAGGIGINLATADTVII 507
Query: 966 FDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQEDK 1025
+D +NPH D QA R HR+GQT +V + LI + T+EE+++ + KNK+ L+ + +
Sbjct: 508 YDSDWNPHADLQAMARVHRLGQTNKVMIYRLIHKGTVEERMMEITKNKMLLEHLVVGKQH 567
Query: 1026 KNEEALENKVTDLLEDIIFDEN 1047
++ L++ + +++ +EN
Sbjct: 568 LCQDELDDIIKYGSKELFSEEN 589
Score = 82.4 bits (202), Expect = 3e-15
Identities = 46/98 (46%), Positives = 61/98 (61%), Gaps = 5/98 (5%)
Query: 502 LKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHHNGPHLVVVPSST 561
L YQ G+N+L + + ILADEMGLGKT Q I+FLA L + + + PHLVV P ST
Sbjct: 225 LHTYQLEGLNFLRYSWSKKTNVILADEMGLGKTIQSIAFLASLFEENLS-PHLVVAPLST 283
Query: 562 LENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENE 599
+ NW REF + PH+ V Y G +E RD++ E+E
Sbjct: 284 IRNWEREFATWAPHMNVVMYTGD----SEARDVIWEHE 317
>Hs4757978 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 220
Score = 119 bits (297), Expect = 3e-26
Identities = 71/177 (40%), Positives = 100/177 (56%), Gaps = 5/177 (2%)
Query: 509 GINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLK-QTHHNGPHLVVVPSSTLENWLR 567
G NWL + CIL DEMGLGKTCQ I+ YL + + GP L++ P E R
Sbjct: 15 GSNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPYVCFEQLER 74
Query: 568 EFNKFCPHLKVEPYYGSQQERAELRDILEENEGQYDVIVTTYNLAAGTKYDVSFLRNRNF 627
+ C + ++ERA L+ L++ E ++ V++TTY + D SFL++ +
Sbjct: 75 RNAEICSRSFLCNICSDKEERACLQQDLKQ-ESRFHVLLTTYEICLK---DASFLKSFPW 130
Query: 628 DVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLF 684
V+V DE H LKN S L + + F LLLTGTP+QN+L+EL SLL F+ P+LF
Sbjct: 131 SVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLF 187
>HsM8922362 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 310
Score = 118 bits (296), Expect = 4e-26
Identities = 71/179 (39%), Positives = 100/179 (55%), Gaps = 10/179 (5%)
Query: 848 LHKLCCKFPSLYK---------FKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLF 898
L + CC P L + FK+ + NSGK L +L ++ H KVL+FS
Sbjct: 3 LLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGH-KVLLFSQM 61
Query: 899 TQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKAGGFGINLV 958
T +LDIL + F RLDG ++R+ + F D + +FL+ST+AGG GINL
Sbjct: 62 TSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINLT 121
Query: 959 CANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALD 1017
A+ VII+D +NP D QA DR HR+GQTK V V L++ +TI++KI+ A K L+
Sbjct: 122 AADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLE 180
>Hs14767157 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 348
Score = 118 bits (296), Expect = 4e-26
Identities = 71/179 (39%), Positives = 100/179 (55%), Gaps = 10/179 (5%)
Query: 848 LHKLCCKFPSLYK---------FKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLF 898
L + CC P L + FK+ + NSGK L +L ++ H KVL+FS
Sbjct: 76 LLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGH-KVLLFSQM 134
Query: 899 TQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKAGGFGINLV 958
T +LDIL + F RLDG ++R+ + F D + +FL+ST+AGG GINL
Sbjct: 135 TSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINLT 194
Query: 959 CANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALD 1017
A+ VII+D +NP D QA DR HR+GQTK V V L++ +TI++KI+ A K L+
Sbjct: 195 AADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLE 253
>SPAC17A2.12 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 897
Score = 117 bits (293), Expect = 9e-26
Identities = 64/169 (37%), Positives = 98/169 (57%), Gaps = 1/169 (0%)
Query: 860 KFKLQSDEWMNSGKVEQLKSVLHKIIDIQ-HEKVLVFSLFTQVLDILEFVLSTLNIKFLR 918
KF ++ EW +S K+ Q + + II + +EK+LV+S F+Q L ++ +L NI+ +R
Sbjct: 711 KFGKRASEWKSSSKLNQARQTILDIIGSKRNEKILVYSQFSQYLCLVSHMLKLENIRHVR 770
Query: 919 LDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQA 978
DG N RQ + F D + V L+S KAG G+NL AN+VI+ + +NP + QA
Sbjct: 771 YDGTMSANQRQKSLHSFNNDKDVLVMLVSLKAGSVGLNLTIANHVILQEPFYNPSIEDQA 830
Query: 979 ADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQEDKKN 1027
DR HR+GQ K V V I++DTIEE+I+ + + K L ++ N
Sbjct: 831 IDRVHRLGQQKPVTVYRFITKDTIEERIVSVQRKKRQLVKEALDSNENN 879
Score = 89.0 bits (219), Expect = 4e-17
Identities = 81/284 (28%), Positives = 135/284 (47%), Gaps = 42/284 (14%)
Query: 480 QLRNNQMKFIRQKPKLLSSDVELKDYQQTGINWLHLLYQNDLSC--ILADEMGLGKTCQV 537
QL+N Q+ Q LL V L +Q G W+ + Q+ C ++AD+MGLGKT Q
Sbjct: 235 QLKNEQV----QSAGLL---VSLLPHQVEGHAWMESMEQSS-KCGGVMADDMGLGKTIQT 286
Query: 538 ISFLAYLK-QTHHNGPHLVVVPSSTLENWLREFN-KFCPHLKVEPY--YGSQQERAELRD 593
I+ L K Q +L+VV + L W E + K P K+ Y +GS ++ + +
Sbjct: 287 IALLLTQKSQDPLRKTNLIVVSVALLHQWAEELSTKVHPSKKLSVYIHHGSTKKNLDSYE 346
Query: 594 ILEENEGQYDVIVTTYNLAAGTKYDVSFLRNRN----------------FDVVVYDEGHM 637
+ QYDV++TTY++ A N N + +V DE H
Sbjct: 347 L-----SQYDVVLTTYSMLAYEMKQNDAFNNNNPATATPPPACSLLETSWYRIVLDEAHT 401
Query: 638 LKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQ 697
++N + +K++A +R L+GTP+QN++ E SLL+F+ K + ++F +
Sbjct: 402 IRNRDTLAAKCCVKLDAKYRWCLSGTPIQNHIDEFYSLLKFLR-----IKPYCVWSLFAK 456
Query: 698 KTRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQVLKHLP 741
S K Y + E A++R + ++ + RR K+ + +LP
Sbjct: 457 D--ISRPLKSYRADIVEAALKRLRILLASTVFRRTKETRVNNLP 498
>HsM14149926 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 757
Score = 115 bits (287), Expect = 5e-25
Identities = 68/154 (44%), Positives = 96/154 (62%), Gaps = 2/154 (1%)
Query: 871 SGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQS 930
+GK+ + +L K+I H KVL+FS + LDILE L + R+DG+ + N RQ+
Sbjct: 5 AGKLVLIDKLLPKLIAGGH-KVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQA 63
Query: 931 LIDRFYEDDTIP-VFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTK 989
IDRF + D+ VFLL T+AGG GINL A+ IIFD +NP +D QA R HR+GQ+K
Sbjct: 64 AIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSK 123
Query: 990 EVQVTTLISRDTIEEKILHLAKNKLALDTHISQE 1023
V+V LI+R++ E ++ A KL LD + Q+
Sbjct: 124 AVKVYRLITRNSYEREMFDKASLKLGLDKAVLQD 157
>YOR191w [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1619
Score = 114 bits (284), Expect = 1e-24
Identities = 68/186 (36%), Positives = 108/186 (57%), Gaps = 8/186 (4%)
Query: 832 NIEYIKEDM--SYMTDFELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQH 889
N + +ED+ Y+++ E K+ K ++Y +S E S K+EQ V+ ++ D
Sbjct: 1405 NQGFTEEDLHAEYLSEMEKQKIQQK--NVYVPNFESLE--PSTKIEQCIQVIQRVFDESA 1460
Query: 890 -EKVLVFSLFTQVLDILE-FVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLS 947
EK+++FS FT +ILE F+ + LN +L+ G R +I+ FY D + L+S
Sbjct: 1461 TEKIIIFSQFTTFFEILEHFLKNKLNFPYLKYIGSMNAQRRSDVINEFYRDPEKRILLIS 1520
Query: 948 TKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKIL 1007
KAG G+ L CAN+V+I D +NP+ + QA DR +R+ QTK+VQV L +D++E++I
Sbjct: 1521 MKAGNSGLTLTCANHVVIVDPFWNPYVEEQAQDRCYRISQTKKVQVHKLFIKDSVEDRIS 1580
Query: 1008 HLAKNK 1013
L K K
Sbjct: 1581 ELQKRK 1586
>At2g21450 [L] KOG0390 DNA repair protein SNF2 family
Length = 816
Score = 113 bits (283), Expect = 1e-24
Identities = 128/532 (24%), Positives = 216/532 (40%), Gaps = 61/532 (11%)
Query: 499 DVELKDYQQTGINWL--HLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHHNGPHLVV 556
D E++ +Q G +L +L CILA G GKT +ISFL LVV
Sbjct: 262 DQEMRPHQTEGFRFLCNNLAADEPGGCILAHAPGSGKTFLLISFLQSFMAMDPQARPLVV 321
Query: 557 VPSSTLENWLREFNKF-CPHLKVEPYYGSQQERAEL-----------RDILEENEGQYDV 604
+P +E+W REF + + + +Y + E + R IL Q+
Sbjct: 322 LPKGIIESWKREFTLWEVEKIPLLDFYSVKAESRKQQLKVLGQWIKERSILFLGYQQFTR 381
Query: 605 IVTTYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTP 664
I+ N A ++ D + +++ DEGH +N + + L ++ +++LTGT
Sbjct: 382 IICDDNFEAASE-DCKLILLEKPTLLILDEGHTSRNKETYMLSSLARVKTRRKVVLTGTL 440
Query: 665 LQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMM 724
QNN++E+ ++L+ + P K+ + + ++ +G + +IE
Sbjct: 441 FQNNVEEVFNILDLVRPKFL--KRPGTREIVSRIMSKAEIPRGKQVNQSSSSIEGTFFAA 498
Query: 725 KPFILRRK-----KDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVK 779
L+R K ++K L +ILH + L + E
Sbjct: 499 VELTLQRSTNFSAKASLIKDLREMTRNILHYHKADFSGLL------------PGLSEFTV 546
Query: 780 MEKASRNVSKNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKED 839
M S ++ ++ + LRK LF+ I E NG + +
Sbjct: 547 MLNLS-SIQRDEVKGLRKME----LFKQISLGAALYIHPKLKSFLEENPSNGEKGFSDNN 601
Query: 840 MSYM-TDFELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLF 898
+ M D L K+ + KF L L + + EK+LVFS +
Sbjct: 602 TTVMKLDKMLKKINVRDGVKMKFFLN----------------LLALCESTGEKLLVFSQY 645
Query: 899 TQVLDILEFVLST-----LNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKAGGF 953
+ LE ++S+ L + + G + R+ ++RF VF S KA G
Sbjct: 646 IVPIKTLERLMSSMKGWRLGKEMFTITGDSSNEQREWSMERFNNSLEAKVFFGSIKACGE 705
Query: 954 GINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEK 1005
GI+LV A+ V+I D NP +QA RA+R GQ ++V L++ D+ EE+
Sbjct: 706 GISLVGASRVLILDVHLNPSVTQQAVARAYRPGQKRKVYAYKLVAADSPEEE 757
>SPBC23E6.02 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1040
Score = 110 bits (274), Expect = 2e-23
Identities = 61/174 (35%), Positives = 94/174 (53%), Gaps = 2/174 (1%)
Query: 868 WMNSGKVEQLKSVLHKIIDIQH-EKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVN 926
W S K+E+ + + +II Q +K+L+FS F L++ IK+L G
Sbjct: 861 WTTSTKIEKALNAVKEIIKKQPTDKILIFSQFVSFLELFTVPFRQEGIKYLMYTGGLSTA 920
Query: 927 DRQSLIDRFYEDDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVG 986
+R + F D + V L+S KAG G+NL CAN+VII D +NP+ + QA DRAHR+G
Sbjct: 921 ERNQALINFEVDPNVRVLLISLKAGNVGLNLTCANHVIILDPFWNPYIEEQAVDRAHRIG 980
Query: 987 QTKEVQVTTLISRDTIEEKILHLAKNKLAL-DTHISQEDKKNEEALENKVTDLL 1039
Q K V + +++ +TIEE++L L K L D+ + ++ + L K L
Sbjct: 981 QDKPVNILRIVTNNTIEERVLALQDRKRELIDSALGEKGLREISRLNTKELSFL 1034
Score = 75.5 bits (184), Expect = 4e-13
Identities = 89/333 (26%), Positives = 141/333 (41%), Gaps = 47/333 (14%)
Query: 502 LKDYQQTGINWLHLLYQNDLSC-ILADEMGLGKTCQVISFLAYLK-QTHHNGPHLVVVPS 559
L ++Q+ G+ WL L ++ ILAD+MGLGKT Q ++ L ++ L++ P
Sbjct: 390 LMEHQKEGLMWLKRLEESSKKGGILADDMGLGKTVQALALLVTRPPESKSVKTTLIITPV 449
Query: 560 STLENWLREF-NKFCPHLKVEPY--YGSQQERAELRDILEENEGQYDVIVTTYNLAA--- 613
S L+ W E K P + Y +GS ++ ++ YD+++TTYN+ A
Sbjct: 450 SLLQQWHNEILTKIAPSHRPTVYIHHGSSKKHKIAEQLMS-----YDIVLTTYNVIAYEF 504
Query: 614 --GTKYDVSFLRN---RNFDV----------VVYDEGHMLKNSMSERFNKLMKINAHFRL 658
YD S N + F+ V+ DE +KN + + + +R
Sbjct: 505 KNKMAYDKSIEDNAPIKKFEHLPFFEAEWYRVILDEAQTIKNRNTLAARGCCLLESTYRW 564
Query: 659 LLTGTPLQNNLKELMSLLEFIMPNLF---VSKKDDLATVFKQKTRTSDADKGYNPLLAEH 715
L+GTP+QN ++E SL++F+ + S D TS K + LL
Sbjct: 565 CLSGTPMQNGVEEFYSLIKFLRIKPYSDWSSFSKDFTIPLSSNINTSAPMKRFRGLLKAV 624
Query: 716 AIERAKTMM---KPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRR 772
+ R K KP + K V K L E TL Q Q+ + R+
Sbjct: 625 LLRRTKNTKIDGKPILTLPPKTAV------KSETDLSSSEMEFYNTL--QSGAQI-QMRK 675
Query: 773 KIKEG-VKMEKASRNVSKNLIMALRKASIHPLL 804
++EG + S V L++ LR+A HP L
Sbjct: 676 YLQEGTITTHYGSLLV---LLLRLRQACCHPWL 705
>At1g05120 [L] KOG1002 Nucleotide excision repair protein RAD16
Length = 833
Score = 108 bits (270), Expect = 4e-23
Identities = 56/153 (36%), Positives = 91/153 (58%), Gaps = 1/153 (0%)
Query: 862 KLQSDEWMNSGKVEQLKSVLHKIIDIQHE-KVLVFSLFTQVLDILEFVLSTLNIKFLRLD 920
+++ D++ S K+E L+ + +++ K +VFS FT LD++ + L + ++L
Sbjct: 652 RIKLDDFQTSTKIEALREEIRFMVERDGSAKAIVFSQFTSFLDLINYTLGKCGVSCVQLV 711
Query: 921 GQTQVNDRQSLIDRFYEDDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAAD 980
G + R + I++F ED VFL+S KAGG +NL A++V + D +NP +RQA D
Sbjct: 712 GSMTMAARDTAINKFKEDPDCRVFLMSLKAGGVALNLTVASHVFMMDPWWNPAVERQAQD 771
Query: 981 RAHRVGQTKEVQVTTLISRDTIEEKILHLAKNK 1013
R HR+GQ K ++V I +T+EE+IL L K K
Sbjct: 772 RIHRIGQYKPIRVVRFIIENTVEERILRLQKKK 804
>At5g22750 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1029
Score = 107 bits (266), Expect = 1e-22
Identities = 58/152 (38%), Positives = 89/152 (58%), Gaps = 2/152 (1%)
Query: 856 PSLYKFKLQSDE-WMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNI 914
P+ +F++ ++ W+ S K+ L L + K ++FS +T LD+L+ LS N
Sbjct: 846 PTESRFQVDVEKNWVESSKITALLEELEGLRS-SGSKSILFSQWTAFLDLLQIPLSRNNF 904
Query: 915 KFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHD 974
F+RLDG R+ ++ F ED +I V L+S KAGG GINL A+N + D +NP
Sbjct: 905 SFVRLDGTLSQQQREKVLKEFSEDGSILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAV 964
Query: 975 DRQAADRAHRVGQTKEVQVTTLISRDTIEEKI 1006
+ QA R HR+GQTKEV++ I + T+EE++
Sbjct: 965 EEQAVMRIHRIGQTKEVKIRRFIVKGTVEERM 996
Score = 78.6 bits (192), Expect = 5e-14
Identities = 69/273 (25%), Positives = 118/273 (42%), Gaps = 31/273 (11%)
Query: 545 KQTHHNGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQYDV 604
K NG +L+V P + L W E + Y Q R + +L ++ DV
Sbjct: 484 KSVLQNGGNLIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYGQSRPKDAKLLSQS----DV 539
Query: 605 IVTTYNLAAG-----TKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLL 659
++TTY + D + + +V DE H +KNS S+ + A R
Sbjct: 540 VITTYGVLTSEFSQENSADHEGIYAVRWFRIVLDEAHTIKNSKSQISLAAAALVADRRWC 599
Query: 660 LTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIER 719
LTGTP+QNNL++L SLL F+ + + + K ++G E ++
Sbjct: 600 LTGTPIQNNLEDLYSLLRFLRIEPWGT------WAWWNKLVQKPFEEG-----DERGLKL 648
Query: 720 AKTMMKPFILRRKKDQVLKH------LPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRK 773
++++KP +LRR K + LP +++CE++E ++ Y K+ + K
Sbjct: 649 VQSILKPIMLRRTKSSTDREGRPILVLPPADARVIYCELSESERDFYDALFKR---SKVK 705
Query: 774 IKEGVKMEKASRNVSK--NLIMALRKASIHPLL 804
+ V+ K N + L++ LR+ HP L
Sbjct: 706 FDQFVEQGKVLHNYASILELLLRLRQCCDHPFL 738
>At1g05480 [L] KOG0390 DNA repair protein SNF2 family
Length = 588
Score = 106 bits (265), Expect = 2e-22
Identities = 146/600 (24%), Positives = 234/600 (38%), Gaps = 127/600 (21%)
Query: 501 ELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHHNGPHLVVVPSS 560
ELKD++ + CI++ G GKT I FL Q + +++ P+S
Sbjct: 24 ELKDFENS---------DETGGCIMSHAPGTGKTRLTIIFLQAYLQCFPDCKPVIIAPAS 74
Query: 561 TLENWLREFNKFCPHLKVEPY----YGSQQERAELRDILEENEG---------------- 600
L W EF K+ + + ++ A L ++++N
Sbjct: 75 LLLTWAEEFKKWNISIPFHNLSSLDFTGKENSAALGLLMQKNATARSNNEIRMVKIYSWI 134
Query: 601 -QYDVIVTTYNL---AAGTKYD---VSFLRNRNFD---------------VVVYDEGHML 638
++ +YNL AG K + +R D ++V DE H
Sbjct: 135 KSKSILGISYNLYEKLAGVKDEDKKTKMVREVKPDKELDDIREILMGRPGLLVLDEAHTP 194
Query: 639 KNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQK 698
+N S + L K+ R+LL+GTP QNN EL ++L P + L + K+
Sbjct: 195 RNQRSCIWKTLSKVETQKRILLSGTPFQNNFLELCNVLGLARPKYL----ERLTSTLKKS 250
Query: 699 --TRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQ 756
T T K + IE K +M PF+ K + LP ++ ELQ
Sbjct: 251 GMTVTKRGKKNLGNEINNRGIEELKAVMLPFVHVHKGSILQSSLPGLRECVVVLNPPELQ 310
Query: 757 KTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSKNLIMALRKASIHPLLFRHIYNDXXXXX 816
+ + + + H RK K + E L S+HP L
Sbjct: 311 RRVLESI---EVTHNRKTKNVFETEHK-----------LSLVSVHPSLVSRCK------- 349
Query: 817 XXXXXXXEPEYYENGNIEYIKEDMSYMTDFELHKLCCKFPSLYKFKLQSDEWMNSGKVEQ 876
I E D L L K +L ++ S K
Sbjct: 350 -------------------ISEKERLSIDEAL------LAQLKKVRLDPNQ---SVKTRF 381
Query: 877 LKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKF--------LRLDGQTQVNDR 928
L + ++ ++ EKVLVFS Q +D L+ ++ L +F L + G+ + R
Sbjct: 382 LMEFV-ELCEVIKEKVLVFS---QYIDPLKLIMKHLVSRFKWNPGEEVLYMHGKLEQKQR 437
Query: 929 QSLIDRFYEDDT-IPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQ 987
Q+LI+ F + + VFL STKA GI+LV A+ VI+ D +NP +RQA RA+R+GQ
Sbjct: 438 QTLINEFNDPKSKAKVFLASTKACSEGISLVGASRVILLDVVWNPAVERQAISRAYRIGQ 497
Query: 988 TKEVQVTTLISRDTIE--EKILHLAKNKLA------LDTHISQEDKKNEEALENKVTDLL 1039
+ V L+++ T E + K++++ H ++K E E+KV D +
Sbjct: 498 KRIVYTYHLVAKGTPEGPKYCKQAQKDRISELVFACSSRHDKGKEKIAEAVTEDKVLDTM 557
>7301343 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 1311
Score = 106 bits (264), Expect = 2e-22
Identities = 83/259 (32%), Positives = 125/259 (48%), Gaps = 21/259 (8%)
Query: 523 CILADEMGLGKTCQVISFL-AYLKQTHHNGPH--LVVVPSSTLENWLREFN---KFCPHL 576
CILA MGLGKT QV++ L T G L++ P ST+ NW REF KF
Sbjct: 485 CILAHCMGLGKTLQVVTLSHTLLVNTRRTGVDRVLIISPLSTVNNWAREFTSWMKFANRN 544
Query: 577 KVEPYYGSQQERAELRDI-LEE--NEGQYDVI-VTTYNLAAGTKYD----------VSFL 622
+E Y S+ + R L E NEG ++ Y + A K + L
Sbjct: 545 DIEVYDISRYKDKPTRIFKLNEWFNEGGVCILGYDMYRILANEKAKGLRKKQREQLMQAL 604
Query: 623 RNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPN 682
+ D+VV DEGH+LKN + + ++ R++LTGTPLQNNL+E +++F+ PN
Sbjct: 605 VDPGPDLVVCDEGHLLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNLREYYCMIQFVKPN 664
Query: 683 LFVSKKDDLATVFKQKTRTSDADKGYNPL-LAEHAIERAKTMMKPFILRRKKDQVLKHLP 741
L + K+ + T D L L +H +++ I RR + +LP
Sbjct: 665 LLGTYKEYMNRFVNPITNGQYTDSTERDLRLMKHRSHILHKLLEGCIQRRDYSVLAPYLP 724
Query: 742 RKHNHILHCEMTELQKTLY 760
KH ++++ ++ELQ+ LY
Sbjct: 725 PKHEYVVYTTLSELQQKLY 743
Score = 87.4 bits (215), Expect = 1e-16
Identities = 61/175 (34%), Positives = 88/175 (49%), Gaps = 27/175 (15%)
Query: 890 EKVLVFSLFTQVLDILEFVLS-----TLNIKF-----------------LRLDGQTQVND 927
+K+LVFS Q LD++E LS T N +F RLDG V
Sbjct: 915 DKLLVFSQSLQSLDVIEHFLSLVDSNTKNYEFEGDVGDFKGCWTSGKDYFRLDGSCSVEQ 974
Query: 928 RQSLIDRFYEDDTIP--VFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRV 985
R+++ +F + +FL+ST+AGG GINLV AN V+IFD S+NP D Q+ R +R
Sbjct: 975 REAMCKQFNNITNLRARLFLISTRAGGLGINLVAANRVVIFDVSWNPSHDTQSIFRVYRF 1034
Query: 986 GQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQEDKKNEEALENKVTDLLE 1040
GQ K + LI+ T+E+K+ K A + E + + + TDL+E
Sbjct: 1035 GQIKPCYIYRLIAMGTMEQKVYERQVAKQATAKRVIDEQQISRHYNQ---TDLME 1086
>At5g63950 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26
(contains SNF2 family DNA-dependent ATPase domain)
Length = 1053
Score = 105 bits (263), Expect = 3e-22
Identities = 81/278 (29%), Positives = 132/278 (47%), Gaps = 35/278 (12%)
Query: 502 LKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHHNGPHLVVVPSST 561
L +Q+ G+NWL L+ IL D+MGLGKT Q+ SFLA L + LVV P +
Sbjct: 377 LYPHQREGLNWLWSLHTQGKGGILGDDMGLGKTMQICSFLAGLFHSKLIKRALVVAPKTL 436
Query: 562 LENWLREFNKFCPHLKVEPYYGSQQERAE--LRDILEENEGQYDVIVTTYNLAAGTK--- 616
L +W++E YYG+ + E L IL+ +++TTY++
Sbjct: 437 LPHWMKELATVGLSQMTREYYGTSTKAREYDLHHILQGK----GILLTTYDIVRNNTKAL 492
Query: 617 ------YDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLK 670
D +D ++ DEGH++KN ++R L++I + R++++GTP+QNNLK
Sbjct: 493 QGDDHYTDEDDEDGNKWDYMILDEGHLIKNPNTQRAKSLLEIPSSHRIIISGTPIQNNLK 552
Query: 671 EL-MSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFIL 729
L + + + + D AT +Q+ ++ A L EH ++PF L
Sbjct: 553 ALSFNRFKQNYEHYILRGTDKNATDREQRIGSTVAKN-----LREH--------IQPFFL 599
Query: 730 RRKKDQVL------KHLPRKHNHILHCEMTELQKTLYQ 761
RR K +V L +K ++ +T Q+ LY+
Sbjct: 600 RRLKSEVFGDDGATSKLSKKDEIVVWLRLTACQRQLYE 637
Score = 94.7 bits (234), Expect = 7e-19
Identities = 60/193 (31%), Positives = 97/193 (50%), Gaps = 13/193 (6%)
Query: 826 EYYENGNIEYIKEDMSYMTDFELHKLCCKFPSLYKFKLQSD--EWMNSGKVEQLKSVLHK 883
E + N I D S + + K C P L + D E M+S ++ V +
Sbjct: 637 EAFLNSEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLEGMDSTLTQEEAGVAER 696
Query: 884 II----------DIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLID 933
+ D Q + + + ++ +L+ + S FLR+DG T+ DR ++
Sbjct: 697 LAMHIADNVDTDDFQTKNDSISCKLSFIMSLLDSLTSN-GYSFLRIDGTTKAPDRLKTVE 755
Query: 934 RFYEDDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQV 993
F E P+FLL+++ GG G+ L A+ VI+ D ++NP D Q+ DRA+R+GQTK+V V
Sbjct: 756 EFQEGHVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQTKDVIV 815
Query: 994 TTLISRDTIEEKI 1006
L++ T+EEKI
Sbjct: 816 YRLMTSATVEEKI 828
>At1g50410 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1056
Score = 103 bits (257), Expect = 1e-21
Identities = 55/148 (37%), Positives = 85/148 (57%)
Query: 891 KVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKA 950
K ++FS +T +LD++E L +I+F RLDG + R + F D + V ++S KA
Sbjct: 903 KTIIFSQWTGMLDLVELSLIENSIEFRRLDGTMSLIARDRAVKEFSNDPDVKVMIMSLKA 962
Query: 951 GGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLA 1010
G G+N++ A +VI+ D +NP + QA DRAHR+GQT+ V VT + ++T+E++IL L
Sbjct: 963 GNLGLNMIAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKNTVEDRILALQ 1022
Query: 1011 KNKLALDTHISQEDKKNEEALENKVTDL 1038
+ K + ED A V DL
Sbjct: 1023 EEKRKMVASAFGEDHGGSSATRLTVDDL 1050
>At3g20010 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1047
Score = 102 bits (255), Expect = 2e-21
Identities = 55/148 (37%), Positives = 84/148 (56%)
Query: 891 KVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKA 950
K ++FS +T +LD++E + I+F RLDG + R + F + + V L+S KA
Sbjct: 894 KTIIFSQWTGMLDLVELRILESGIEFRRLDGTMSLAARDRAVKEFSKKPDVKVMLMSLKA 953
Query: 951 GGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLA 1010
G G+N+V A +VI+ D +NP + QA DRAHR+GQT+ V VT + +DT+E++IL L
Sbjct: 954 GNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKDTVEDRILKLQ 1013
Query: 1011 KNKLALDTHISQEDKKNEEALENKVTDL 1038
+ K + E+ A V DL
Sbjct: 1014 EEKRTMVASAFGEEHGGSSATRLTVDDL 1041
>At3g24340 [L] KOG0390 DNA repair protein SNF2 family
Length = 1132
Score = 102 bits (253), Expect = 4e-21
Identities = 136/561 (24%), Positives = 234/561 (41%), Gaps = 105/561 (18%)
Query: 523 CILADEMGLGKTCQVISFL-AYLKQTHHNGPHLVVVPSSTLENW---LREFNKFCPHLKV 578
CI++ + G GKT + FL +YLK+ ++ P +V+ P++ + W +R++N P +
Sbjct: 612 CIISHKAGTGKTRLTVVFLQSYLKRFPNSHP-MVIAPATLMRTWEDEVRKWNVNIPFYNM 670
Query: 579 EPYYGSQQERAELRDILEENEGQYDV----IVTTYNLAA--GTKYDV--SFLRNRNFD-- 628
S E AE LE N + +V+ + + G Y + N+N +
Sbjct: 671 NSLQLSGYEDAEAVSRLEGNRHHNSIRMVKLVSWWKQKSILGISYPLYEKLAANKNTEGM 730
Query: 629 ------------VVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLL 676
++V DEGH +N S + L ++ R+ L+GT QNN KEL ++L
Sbjct: 731 QVFRRMLVELPGLLVLDEGHTPRNQSSLIWKVLTEVRTEKRIFLSGTLFQNNFKELSNVL 790
Query: 677 EFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQV 736
P + KD +++ + ++ S + + + E+ I K M+ F+ + +
Sbjct: 791 CLARP----ADKDTISSRIHELSKCSQEGE-HGRVNEENRIVDLKAMIAHFVHVHEGTIL 845
Query: 737 LKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSKNLIMALR 796
+ LP + ++ + +QQ K++++ + + E L
Sbjct: 846 QESLPGLRDCVV------VLNPPFQQ--KKILDRIDTSQNTFEFEHK-----------LS 886
Query: 797 KASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSY--MTDFELHKLCCK 854
S+HP L+ KED+ T L +L K
Sbjct: 887 AVSVHPSLYLCCNPTK------------------------KEDLVIGPATLGTLKRLRLK 922
Query: 855 FPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTL-- 912
+ K K D SG V+ EKVLV+S Q +D L+ ++ L
Sbjct: 923 YEEGVKTKFLIDFIRISGTVK--------------EKVLVYS---QYIDTLKLIMEQLIA 965
Query: 913 ------NIKFLRLDGQTQVNDRQSLIDRFYEDDT-IPVFLLSTKAGGFGINLVCANNVII 965
+ L + G+ + DRQ +ID F + D+ V L STKA GI+LV A+ V+I
Sbjct: 966 ECDWTEGEQILLMHGKVEQRDRQHMIDNFNKPDSGSKVLLASTKACSEGISLVGASRVVI 1025
Query: 966 FDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQEDK 1025
D +NP + QA RA R+GQ + V + L+ +DT E K + +
Sbjct: 1026 LDVVWNPSVESQAISRAFRIGQKRAVFIYHLMVKDTSEWNKYCKQSEKHRISELVFSSTN 1085
Query: 1026 KNEEALENKVTDLLEDIIFDE 1046
+ ++ + N+V +D I DE
Sbjct: 1086 EKDKPINNEVVS--KDRILDE 1104
>At1g11100 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1227
Score = 101 bits (252), Expect = 5e-21
Identities = 55/161 (34%), Positives = 91/161 (56%)
Query: 878 KSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYE 937
KS + ++++ EK +VF+ +T++LD+LE L + I++ R DG+ V R + + F
Sbjct: 1061 KSSVGGVVNVAGEKAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNT 1120
Query: 938 DDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLI 997
+ V ++S KA G+N+V A +VI+ D +NP + QA DRAHR+GQT+ V+V
Sbjct: 1121 LPDVSVMIMSLKAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFT 1180
Query: 998 SRDTIEEKILHLAKNKLALDTHISQEDKKNEEALENKVTDL 1038
+DT+E++IL L + K + E + V DL
Sbjct: 1181 VKDTVEDRILALQQKKRKMVASAFGEHENGSRESHLSVEDL 1221
Score = 79.0 bits (193), Expect = 4e-14
Identities = 92/365 (25%), Positives = 148/365 (40%), Gaps = 80/365 (21%)
Query: 500 VELKDYQQTGINWLHLLYQNDLSC---ILADEMGLGKTCQVISFLAYLKQTHH------- 549
V L +Q+ ++W+ + C ILAD+ GLGKT I+ + + T +
Sbjct: 540 VSLLRHQRIALSWMSQKETSGNPCFGGILADDQGLGKTVSTIALILTERSTPYLPCEEDS 599
Query: 550 -NGP-------------------------------HLVVVPSSTLENWLREFNKFCP--- 574
NG L+V P+S + W E K
Sbjct: 600 KNGGCNQSDHSQVVFNENKVVEDSLCKMRGRPAAGTLIVCPTSLMRQWADELRKKVTLEA 659
Query: 575 HLKVEPYYGSQQERAELRDILEENEGQYDVIVTTYNLAAGTKY----DVSFLRNRNFDV- 629
HL V Y+G + + +YDV++TTY+L + K+ V FL V
Sbjct: 660 HLSVLVYHGCSRTKDP------HELAKYDVVITTYSLVSKRKHMDCEPVEFLSGPLAQVS 713
Query: 630 ---VVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVS 686
VV DE +KN ++ ++A R L+GTP+QN++ +L S F+ + + S
Sbjct: 714 WFRVVLDEAQSIKNYKTQASIACSGLHAKRRWCLSGTPIQNSIADLYSYFRFLKYDPYSS 773
Query: 687 KKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQVLK-----HLP 741
+ T+ + +S +GY L A ++K +LRR KD +L LP
Sbjct: 774 YQTFCETI--KNPISSYPGEGYKTLQA---------ILKKVMLRRTKDTLLDGKPVISLP 822
Query: 742 RKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSKNLIM--ALRKAS 799
K + + T+ ++ Y K + R + KE + +N L+M LR+A
Sbjct: 823 PKSIELRRVDFTKEERDFYS---KLECDSRDQFKEYAEAGTVKQNYVNILLMLLRLRQAC 879
Query: 800 IHPLL 804
HPLL
Sbjct: 880 GHPLL 884
>At1g61140 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1287
Score = 101 bits (251), Expect = 7e-21
Identities = 56/154 (36%), Positives = 87/154 (56%)
Query: 885 IDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVF 944
I + EK +VFS +T++L++LE L + +I++ RLDG V R + F + V
Sbjct: 1126 IKVAGEKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTLPEVTVM 1185
Query: 945 LLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEE 1004
++S KA G+N+V A +V++ D +NP + QA DRAHR+GQT+ V V +DT+E+
Sbjct: 1186 IMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDTVED 1245
Query: 1005 KILHLAKNKLALDTHISQEDKKNEEALENKVTDL 1038
+IL L + K + ED+K V DL
Sbjct: 1246 RILALQQKKRMMVASAFGEDEKGSRQSHLTVEDL 1279
Score = 55.8 bits (133), Expect = 3e-07
Identities = 78/316 (24%), Positives = 121/316 (37%), Gaps = 79/316 (25%)
Query: 554 LVVVPSSTLENWLREFNKFCP---HLKVEPYYGSQQERAELRDILEENEGQYDVIVTTYN 610
LVV P+S + W E +K +L V Y+GS + + +YDV+VTT++
Sbjct: 675 LVVCPTSVMRQWADELHKKVTSEANLSVLVYHGSSRTKDP------HELAKYDVVVTTFS 728
Query: 611 LAA----------------------GT-----------------------KYDVSFLRNR 625
+ + GT K V FL
Sbjct: 729 IVSMEVPKQPLVDDEDEEKDGVHDGGTAATGFCSNKKRKYPPDSKKKGSKKKKVEFLSGP 788
Query: 626 NFDV----VVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMP 681
V VV DE +KN ++ + A R L+GTP+QN++ +L S F+
Sbjct: 789 LAKVSWFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKY 848
Query: 682 NLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQVLK--- 738
+ + S +T+ TR + KGY L A ++K +LRR K +L
Sbjct: 849 DPYSSYVLFCSTIKNPITR--NPVKGYQKLQA---------ILKTVMLRRTKGSLLDGKP 897
Query: 739 --HLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSKNLIM--A 794
LP K + + T ++ Y K E R + +E + +N L+M
Sbjct: 898 IISLPPKSIELRKVDFTVEERDFYS---KLEAESRTQFREYAEAGTVKQNYVNILLMLLR 954
Query: 795 LRKASIHPLLFRHIYN 810
LR+A HPLL Y+
Sbjct: 955 LRQACDHPLLVNGEYS 970
>At5g43530 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1277
Score = 100 bits (250), Expect = 9e-21
Identities = 58/164 (35%), Positives = 88/164 (53%), Gaps = 2/164 (1%)
Query: 851 LCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDI-QHEKVLVFSLFTQVLDILEFVL 909
+ C S+++ + + W S KV +L L KI EK +VFS +T LD+LE L
Sbjct: 1089 ISCPTDSIFRVDVVKN-WKESSKVSELLKCLEKIKKSGSGEKSIVFSQWTSFLDLLEIPL 1147
Query: 910 STLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKAGGFGINLVCANNVIIFDQS 969
+FLR DG+ R+ ++ F E + L+S KAGG G+NL A++V + D
Sbjct: 1148 RRRGFEFLRFDGKLAQKGREKVLKEFNETKQKTILLMSLKAGGVGLNLTAASSVFLMDPW 1207
Query: 970 FNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNK 1013
+NP + QA R HR+GQ + V V I +DT+EE++ + K
Sbjct: 1208 WNPAVEEQAIMRIHRIGQKRTVFVRRFIVKDTVEERMQQVQARK 1251
Score = 74.3 bits (181), Expect = 9e-13
Identities = 83/326 (25%), Positives = 136/326 (41%), Gaps = 67/326 (20%)
Query: 524 ILADEMGLGKTCQVISFLAYL-----------------------KQTHH-------NGPH 553
ILAD MGLGKT I+ + K+ H G
Sbjct: 684 ILADAMGLGKTVMTIALILARPGRGNPENEDVLVADVNADKRNRKEIHMALTTVKAKGGT 743
Query: 554 LVVVPSSTLENWLREFNKFCPH--LKVEPYYGSQQERAELRDILEENEGQYDVIVTTYN- 610
L++ P + L W E + V YYG + + + I +DV++TTY
Sbjct: 744 LIICPMALLSQWKDELETHSKPDTVSVLVYYGGDRTH-DAKAI-----ASHDVVLTTYGV 797
Query: 611 LAAGTKYDV--SFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNN 668
L + K D+ S ++ +V DE H +K+ ++ ++++H R LTGTPLQN
Sbjct: 798 LTSAYKQDMANSIFHRIDWYRIVLDEAHTIKSWKTQAAKATFELSSHCRWCLTGTPLQNK 857
Query: 669 LKELMSLLEFIMPNLFVSKKDDLATVFK--QKTRTSDADKGYNPLLAEHAIERAKTMMKP 726
L++L SLL F L V + A K QK + +G ++ K +++P
Sbjct: 858 LEDLYSLLCF----LHVEPWCNWAWWSKLIQKPYENGDPRG---------LKLIKAILRP 904
Query: 727 FILRRKKD------QVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKM 780
+LRR K+ ++ LP ++ CE +E ++ Y K+ + + + V
Sbjct: 905 LMLRRTKETRDKEGSLILELPPTDVQVIECEQSEAERDFYTALFKR---SKVQFDQFVAQ 961
Query: 781 EKASRNVSK--NLIMALRKASIHPLL 804
K N + L++ LR+ HP L
Sbjct: 962 GKVLHNYANILELLLRLRQCCNHPFL 987
>7293730 [R] KOG0383 Predicted helicase
Length = 884
Score = 99.8 bits (247), Expect = 2e-20
Identities = 63/176 (35%), Positives = 93/176 (52%), Gaps = 20/176 (11%)
Query: 487 KFIRQKPKLLSSDVELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYL-K 545
K+ Q L + ++L YQ GINWL + + ILADEMGLGKT Q ++FL L K
Sbjct: 706 KYEDQPAFLEGTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLYK 765
Query: 546 QTHHNGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRD------------ 593
+ H GP LV VP STL NW REF + P Y G + RA +R+
Sbjct: 766 EGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGAIRG 825
Query: 594 ----ILEENEGQYDVIVTTYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSER 645
L + +++V++T+Y L + D + L + ++ V+V DE H LK++ S++
Sbjct: 826 SKVSRLRTTQYKFNVLLTSYELIS---MDAACLGSIDWAVLVVDEAHRLKSNQSKK 878
>Hs20336209 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 2492
Score = 99.4 bits (246), Expect = 3e-20
Identities = 135/597 (22%), Positives = 227/597 (37%), Gaps = 61/597 (10%)
Query: 211 PARSMADRTTMSTIK-NLSSKKG-----KLVRGDAIKKKQKIKLSDDEE--DEITDQSND 262
P +A + + IK NLSS + + G KQ + DEE +++ +S+
Sbjct: 1267 PENRIAKKMLLEEIKANLSSDEDGSSDDEPEEGKKRTGKQNEENPGDEEAKNQVNSESDS 1326
Query: 263 DGELDTEPEYEEKVTESNFDQVLKFLNEADPKDLADLGEISIEKAALVIKERPFEDLEQF 322
D E +P Y ++ L +D + + E + + R E
Sbjct: 1327 DSEESKKPRYRHRLLRHK-------LTVSDGESGEEKKTKPKEHKEVKGRNRRKVSSEDS 1379
Query: 323 QQLDFQSKSPSPAPGKARKSQQKKDGLKILDKIEQSIKGYNAIESLIRKCSKYGDVIANQ 382
+ DFQ S ++ Q+ + ++E++ + Y + R+ D +
Sbjct: 1380 EDSDFQESGVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQKKKR-RRIKVQEDSSSEN 1438
Query: 383 MTNWGVDFSSSKDTELNILDVDTYSDDEANETITNDSANVQIIK-----SSTTSRENSLG 437
+N + ++ E + + +DE +++ + +I K T +N+L
Sbjct: 1439 KSNSEEEEEEKEEEEEEEEEEEEEEEDENDDSKSPGKGRKKIRKILKDDKLRTETQNALK 1498
Query: 438 PSKRKRNXXXXXXXXXXXXXXXXXXXXXKPRARTKQKKTSITQLRNNQMKFIRQKPKLLS 497
+ +R P K + + + ++ ++
Sbjct: 1499 EEEERRKRIAEREREREKLREVIEIEDASPTKCPITTKLVLDEDEETKEPLVQVHRNMV- 1557
Query: 498 SDVELKDYQQTGINWLHLLYQNDLS---------CILADEMGLGKTCQVISFL--AYLKQ 546
++LK +Q G+ ++ + CILA MGLGKT QV+SFL L
Sbjct: 1558 --IKLKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQVVSFLHTVLLCD 1615
Query: 547 THHNGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQY---- 602
LVV P +T NW+ EF K+ LK + + E +EL + E Y
Sbjct: 1616 KLDFSTALVVCPLNTALNWMNEFEKWQEGLKDD----EKLEVSELATVKRPQERSYMLQR 1671
Query: 603 -----DVIVTTY----NLAAGTKYDVSFLR--------NRNFDVVVYDEGHMLKNSMSER 645
V++ Y NLA G L+ + D VV DEGH+LKN S
Sbjct: 1672 WQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAV 1731
Query: 646 FNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDAD 705
+ I + R++LTGTPLQNNL E ++ FI NL S K+ AD
Sbjct: 1732 SKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCAD 1791
Query: 706 KG-YNPLLAEHAIERAKTMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQ 761
+ + + M+ + R+ + K LP KH ++L MT +Q LYQ
Sbjct: 1792 STMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTSIQCKLYQ 1848
Score = 95.1 bits (235), Expect = 5e-19
Identities = 68/205 (33%), Positives = 101/205 (49%), Gaps = 28/205 (13%)
Query: 870 NSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTL----------------- 912
+SGK+ L +L +I +KVLVFS LD++E L
Sbjct: 2016 HSGKMVLLFEILRMAEEIG-DKVLVFSQSLISLDLIEDFLELASREKTEDKDKPLIYKGE 2074
Query: 913 -----NIKFLRLDGQTQVNDRQSLIDRFYEDDTIP--VFLLSTKAGGFGINLVCANNVII 965
NI + RLDG T R+ + F ++ + +F++STKAG GINLV AN VII
Sbjct: 2075 GKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVII 2134
Query: 966 FDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQEDK 1025
FD S+NP D Q+ R +R GQTK V V +++ T+E+KI K +L + + +
Sbjct: 2135 FDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQ 2194
Query: 1026 KNEEALENKVTDLL---EDIIFDEN 1047
N++T+L D++ D N
Sbjct: 2195 VERHFTMNELTELYTFEPDLLDDPN 2219
>Hs20336207 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 2288
Score = 99.4 bits (246), Expect = 3e-20
Identities = 135/597 (22%), Positives = 227/597 (37%), Gaps = 61/597 (10%)
Query: 211 PARSMADRTTMSTIK-NLSSKKG-----KLVRGDAIKKKQKIKLSDDEE--DEITDQSND 262
P +A + + IK NLSS + + G KQ + DEE +++ +S+
Sbjct: 1063 PENRIAKKMLLEEIKANLSSDEDGSSDDEPEEGKKRTGKQNEENPGDEEAKNQVNSESDS 1122
Query: 263 DGELDTEPEYEEKVTESNFDQVLKFLNEADPKDLADLGEISIEKAALVIKERPFEDLEQF 322
D E +P Y ++ L +D + + E + + R E
Sbjct: 1123 DSEESKKPRYRHRLLRHK-------LTVSDGESGEEKKTKPKEHKEVKGRNRRKVSSEDS 1175
Query: 323 QQLDFQSKSPSPAPGKARKSQQKKDGLKILDKIEQSIKGYNAIESLIRKCSKYGDVIANQ 382
+ DFQ S ++ Q+ + ++E++ + Y + R+ D +
Sbjct: 1176 EDSDFQESGVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQKKKR-RRIKVQEDSSSEN 1234
Query: 383 MTNWGVDFSSSKDTELNILDVDTYSDDEANETITNDSANVQIIK-----SSTTSRENSLG 437
+N + ++ E + + +DE +++ + +I K T +N+L
Sbjct: 1235 KSNSEEEEEEKEEEEEEEEEEEEEEEDENDDSKSPGKGRKKIRKILKDDKLRTETQNALK 1294
Query: 438 PSKRKRNXXXXXXXXXXXXXXXXXXXXXKPRARTKQKKTSITQLRNNQMKFIRQKPKLLS 497
+ +R P K + + + ++ ++
Sbjct: 1295 EEEERRKRIAEREREREKLREVIEIEDASPTKCPITTKLVLDEDEETKEPLVQVHRNMV- 1353
Query: 498 SDVELKDYQQTGINWLHLLYQNDLS---------CILADEMGLGKTCQVISFL--AYLKQ 546
++LK +Q G+ ++ + CILA MGLGKT QV+SFL L
Sbjct: 1354 --IKLKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQVVSFLHTVLLCD 1411
Query: 547 THHNGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQY---- 602
LVV P +T NW+ EF K+ LK + + E +EL + E Y
Sbjct: 1412 KLDFSTALVVCPLNTALNWMNEFEKWQEGLKDD----EKLEVSELATVKRPQERSYMLQR 1467
Query: 603 -----DVIVTTY----NLAAGTKYDVSFLR--------NRNFDVVVYDEGHMLKNSMSER 645
V++ Y NLA G L+ + D VV DEGH+LKN S
Sbjct: 1468 WQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAV 1527
Query: 646 FNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDAD 705
+ I + R++LTGTPLQNNL E ++ FI NL S K+ AD
Sbjct: 1528 SKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCAD 1587
Query: 706 KG-YNPLLAEHAIERAKTMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQ 761
+ + + M+ + R+ + K LP KH ++L MT +Q LYQ
Sbjct: 1588 STMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTSIQCKLYQ 1644
Score = 95.1 bits (235), Expect = 5e-19
Identities = 68/205 (33%), Positives = 101/205 (49%), Gaps = 28/205 (13%)
Query: 870 NSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTL----------------- 912
+SGK+ L +L +I +KVLVFS LD++E L
Sbjct: 1812 HSGKMVLLFEILRMAEEIG-DKVLVFSQSLISLDLIEDFLELASREKTEDKDKPLIYKGE 1870
Query: 913 -----NIKFLRLDGQTQVNDRQSLIDRFYEDDTIP--VFLLSTKAGGFGINLVCANNVII 965
NI + RLDG T R+ + F ++ + +F++STKAG GINLV AN VII
Sbjct: 1871 GKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVII 1930
Query: 966 FDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQEDK 1025
FD S+NP D Q+ R +R GQTK V V +++ T+E+KI K +L + + +
Sbjct: 1931 FDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQ 1990
Query: 1026 KNEEALENKVTDLL---EDIIFDEN 1047
N++T+L D++ D N
Sbjct: 1991 VERHFTMNELTELYTFEPDLLDDPN 2015
>Hs20336205 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 2454
Score = 99.4 bits (246), Expect = 3e-20
Identities = 135/597 (22%), Positives = 227/597 (37%), Gaps = 61/597 (10%)
Query: 211 PARSMADRTTMSTIK-NLSSKKG-----KLVRGDAIKKKQKIKLSDDEE--DEITDQSND 262
P +A + + IK NLSS + + G KQ + DEE +++ +S+
Sbjct: 1229 PENRIAKKMLLEEIKANLSSDEDGSSDDEPEEGKKRTGKQNEENPGDEEAKNQVNSESDS 1288
Query: 263 DGELDTEPEYEEKVTESNFDQVLKFLNEADPKDLADLGEISIEKAALVIKERPFEDLEQF 322
D E +P Y ++ L +D + + E + + R E
Sbjct: 1289 DSEESKKPRYRHRLLRHK-------LTVSDGESGEEKKTKPKEHKEVKGRNRRKVSSEDS 1341
Query: 323 QQLDFQSKSPSPAPGKARKSQQKKDGLKILDKIEQSIKGYNAIESLIRKCSKYGDVIANQ 382
+ DFQ S ++ Q+ + ++E++ + Y + R+ D +
Sbjct: 1342 EDSDFQESGVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQKKKR-RRIKVQEDSSSEN 1400
Query: 383 MTNWGVDFSSSKDTELNILDVDTYSDDEANETITNDSANVQIIK-----SSTTSRENSLG 437
+N + ++ E + + +DE +++ + +I K T +N+L
Sbjct: 1401 KSNSEEEEEEKEEEEEEEEEEEEEEEDENDDSKSPGKGRKKIRKILKDDKLRTETQNALK 1460
Query: 438 PSKRKRNXXXXXXXXXXXXXXXXXXXXXKPRARTKQKKTSITQLRNNQMKFIRQKPKLLS 497
+ +R P K + + + ++ ++
Sbjct: 1461 EEEERRKRIAEREREREKLREVIEIEDASPTKCPITTKLVLDEDEETKEPLVQVHRNMV- 1519
Query: 498 SDVELKDYQQTGINWLHLLYQNDLS---------CILADEMGLGKTCQVISFL--AYLKQ 546
++LK +Q G+ ++ + CILA MGLGKT QV+SFL L
Sbjct: 1520 --IKLKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQVVSFLHTVLLCD 1577
Query: 547 THHNGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQY---- 602
LVV P +T NW+ EF K+ LK + + E +EL + E Y
Sbjct: 1578 KLDFSTALVVCPLNTALNWMNEFEKWQEGLKDD----EKLEVSELATVKRPQERSYMLQR 1633
Query: 603 -----DVIVTTY----NLAAGTKYDVSFLR--------NRNFDVVVYDEGHMLKNSMSER 645
V++ Y NLA G L+ + D VV DEGH+LKN S
Sbjct: 1634 WQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAV 1693
Query: 646 FNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDAD 705
+ I + R++LTGTPLQNNL E ++ FI NL S K+ AD
Sbjct: 1694 SKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCAD 1753
Query: 706 KG-YNPLLAEHAIERAKTMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQ 761
+ + + M+ + R+ + K LP KH ++L MT +Q LYQ
Sbjct: 1754 STMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTSIQCKLYQ 1810
Score = 95.1 bits (235), Expect = 5e-19
Identities = 68/205 (33%), Positives = 101/205 (49%), Gaps = 28/205 (13%)
Query: 870 NSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTL----------------- 912
+SGK+ L +L +I +KVLVFS LD++E L
Sbjct: 1978 HSGKMVLLFEILRMAEEIG-DKVLVFSQSLISLDLIEDFLELASREKTEDKDKPLIYKGE 2036
Query: 913 -----NIKFLRLDGQTQVNDRQSLIDRFYEDDTIP--VFLLSTKAGGFGINLVCANNVII 965
NI + RLDG T R+ + F ++ + +F++STKAG GINLV AN VII
Sbjct: 2037 GKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVII 2096
Query: 966 FDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQEDK 1025
FD S+NP D Q+ R +R GQTK V V +++ T+E+KI K +L + + +
Sbjct: 2097 FDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQ 2156
Query: 1026 KNEEALENKVTDLL---EDIIFDEN 1047
N++T+L D++ D N
Sbjct: 2157 VERHFTMNELTELYTFEPDLLDDPN 2181
>At2g16390 [L] KOG0390 DNA repair protein SNF2 family
Length = 888
Score = 99.4 bits (246), Expect = 3e-20
Identities = 128/530 (24%), Positives = 218/530 (40%), Gaps = 72/530 (13%)
Query: 501 ELKDYQQTGINWL--HLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHHNGPHLVVVP 558
E+K +Q G +L +L+ + CI+A G GKT +ISF+ + LVV+P
Sbjct: 349 EMKPHQIEGFQFLCSNLVADDPGGCIMAHAPGSGKTFMIISFMQSFLAKYPQAKPLVVLP 408
Query: 559 SSTLENWLREFNKF-CPHLKVEPYYGSQQE-RAELRDILEENEGQYDVIVTTYNLAAGTK 616
L W +EF ++ + + +Y ++ E RA+ IL++ + ++ Y +
Sbjct: 409 KGILPTWKKEFVRWQVEDIPLLDFYSAKAENRAQQLSILKQWMEKKSILFLGYQQFSTIV 468
Query: 617 YDVSF-------LRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNL 669
D + + + +++ DEGH +N + L ++ +++L+GT QN++
Sbjct: 469 CDDTTDSLSCQEILLKVPSILILDEGHTPRNEDTNLLQSLAQVQTPRKVVLSGTLYQNHV 528
Query: 670 KELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDAD-----KGYNPLLA---EHAIERAK 721
KE+ ++L + P K D + K+ + D G N +A +E
Sbjct: 529 KEVFNILNLVRPKFL--KLDTSKSAVKRILAYTPCDVRGRLTGSNSDMASMFNETVEHTL 586
Query: 722 TMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKME 781
+ F ++ K Q L+ + +K H + + L + V+ K VK
Sbjct: 587 QKSEDFTVKIKVIQDLREMTKKVLHYYKGDFLDELPGL--ADFTVVLNLSPKQLNEVK-- 642
Query: 782 KASRNVSKNLIMALRKA-SIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDM 840
K R K + A+ A +HP L +++D +D+
Sbjct: 643 KLRREKRKFKVSAVGSAIYLHPKL--KVFSDK------------------------SDDV 676
Query: 841 SYMTDFELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQ 900
S T E+ + KL +N G + L + D EK+LVFS +
Sbjct: 677 SDTTMDEMVE-----------KLD----LNEGVKAKFFLNLINLCDSAGEKLLVFSQYLI 721
Query: 901 VLDILEFVLS-----TLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKAGGFGI 955
L LE + + L + L G T R+ ++ F +F S KA G GI
Sbjct: 722 PLKFLERLAALAKGWKLGKEVFVLTGNTSSEQREWSMETFNSSPDAKIFFGSIKACGEGI 781
Query: 956 NLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEK 1005
+LV A+ ++I D NP RQA RA R GQ K V LI+ + EE+
Sbjct: 782 SLVGASRILILDVPLNPSVTRQAIGRAFRPGQKKMVHAYRLIAGSSPEEE 831
>SPCC1620.14c [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 430
Score = 97.1 bits (240), Expect = 1e-19
Identities = 52/102 (50%), Positives = 68/102 (65%), Gaps = 4/102 (3%)
Query: 943 VFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTI 1002
+F+LST+AGG G+NL A+ VIIFD +NPH D QA DRAHR+GQTKEV++ LI+ +I
Sbjct: 8 IFMLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRILRLITEKSI 67
Query: 1003 EEKILHLAKNKLALDTHISQ----EDKKNEEALENKVTDLLE 1040
EE IL A+ KL LD + Q ++K E E + LLE
Sbjct: 68 EENILSRAQYKLDLDGKVIQAGKFDNKSTPEEREAFLRSLLE 109
>At5g05130 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 881
Score = 96.7 bits (239), Expect = 2e-19
Identities = 67/176 (38%), Positives = 97/176 (55%), Gaps = 8/176 (4%)
Query: 871 SGKVEQLKSVLHKII-DIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQ 929
S KV L S+L + + K +VFS F ++L +LE L LRLDG V R
Sbjct: 706 SSKVSALLSLLMASRQENPNTKSVVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRT 765
Query: 930 SLIDRFYEDD-TIPVFLL-STKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQ 987
+I F + T PV LL S KA G GINL A+ V +FD +NP + QA DR HR+GQ
Sbjct: 766 QVIGEFGNPELTGPVVLLASLKASGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQ 825
Query: 988 TKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQEDKKNEEALENKVTDLLEDII 1043
+EV++ +I+R++IEE++L L + K L + +K +E N +ED++
Sbjct: 826 KQEVKMIRMIARNSIEERVLELQQKKKNLANEAFKRRQKKDEREVN-----VEDVV 876
Score = 71.6 bits (174), Expect = 6e-12
Identities = 65/250 (26%), Positives = 122/250 (48%), Gaps = 27/250 (10%)
Query: 554 LVVVPSSTLENWLREFNKFCPH--LKVEPYYGSQQERAELRDILEENEGQYDVIVTTYN- 610
L+V P S + W+ + + LKV Y+G ++ ++ ++++ YD+++TTY
Sbjct: 361 LIVCPPSVISAWITQLEEHTVPGILKVYMYHGGERTD-DVNELMK-----YDIVLTTYGT 414
Query: 611 LAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLK 670
LA ++ S ++ + ++ DE H +KN+ +++ + K+ A R +TGTP+QN
Sbjct: 415 LAVEESWEDSPVKKMEWLRIILDEAHTIKNANAQQSRVVCKLKASRRWAVTGTPIQNGSF 474
Query: 671 ELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILR 730
+L SL+ F+ F K + + Q+ KG + R + +M LR
Sbjct: 475 DLYSLMAFLRFEPFSIKSYWQSLI--QRPLGQGNKKG---------LSRLQVLMATISLR 523
Query: 731 RKKDQVLKHLPRKHNHILHCEMTELQKTLY---QQEIKQVMEHRRKIKEGVKMEKASRNV 787
R K++ L LP K + E++ ++ LY + E K V+++ I G M S +
Sbjct: 524 RTKEKSLIGLPPKTVETCYVELSPEERQLYDHMEGEAKGVVQN--LINNGSLMRNYSTVL 581
Query: 788 SKNLIMALRK 797
S +I+ LR+
Sbjct: 582 S--IILRLRQ 589
>CE17477 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily
Length = 1274
Score = 95.5 bits (236), Expect = 4e-19
Identities = 61/173 (35%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 890 EKVLVFSLFTQVLDILEFVLSTLNIK--------------FLRLDGQTQVNDRQSLIDRF 935
EK+L+FS LD+LE +L I+ +LRLDG T DR+ LI+RF
Sbjct: 794 EKILIFSQNLTALDMLEEILKKRQIRGKDGPGQRWEKNRNYLRLDGTTSGADREKLINRF 853
Query: 936 YEDDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTT 995
+ + +FL+ST+AG GINLV AN II D +NP D QA R +R GQ K+ V
Sbjct: 854 NSEPGLSLFLISTRAGSLGINLVSANRCIIIDACWNPCHDAQAVCRVYRYGQQKKTFVYR 913
Query: 996 LISRDTIEEKILHLAKNKLALDTHISQEDKKNEEALENKVTDLLEDIIFDENQ 1048
LI +++E I + +K L + + + + + ++ LL ++DE Q
Sbjct: 914 LIMDNSMERSIFNRQISKHGLQQRVVDDAQVDANISQKELETLL---MYDEAQ 963
Score = 67.0 bits (162), Expect = 1e-10
Identities = 43/137 (31%), Positives = 70/137 (50%), Gaps = 5/137 (3%)
Query: 628 DVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSK 687
D+VV DEGH +KN +E L IN R++LTG PLQNNL E +++F+ P ++
Sbjct: 458 DLVVCDEGHKIKNITAEISMTLGAINTKRRIVLTGYPLQNNLLEYFCMIDFVRPKYLGTR 517
Query: 688 KDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKT---MMKPFILRRKKDQVLKHLPRKH 744
K + K D +P + A++R ++K F+ RR + K LP
Sbjct: 518 KSFIDRFEKPIKNGQCVDS--SPDDVKIALQRTHVLVELVKGFVQRRTHHLLKKILPESK 575
Query: 745 NHILHCEMTELQKTLYQ 761
++L +++Q+ LY+
Sbjct: 576 EYVLLLRKSQIQRQLYR 592
>Hs21071052 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1009
Score = 94.7 bits (234), Expect = 7e-19
Identities = 61/179 (34%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 867 EWMNSGKVEQLKSVLHKIIDIQHE----KVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQ 922
EW +S K+ L +H + D++ + K LV S FT L ++E L F RLDG
Sbjct: 828 EWTSSSKINAL---MHALTDLRKKNPNIKSLVVSQFTTFLSLIEIPLKASGFVFTRLDGS 884
Query: 923 TQVNDRQSLIDRFY--EDDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAAD 980
R I F E + + LLS KAGG G+NL A+ V + D ++NP + Q D
Sbjct: 885 MAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNLSAASRVFLMDPAWNPAAEDQCFD 944
Query: 981 RAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQEDKKN-EEALENKVTDL 1038
R HR+GQ +EV +T I +D++EE +L + K L K N +E + K+ ++
Sbjct: 945 RCHRLGQKQEVIITKFIVKDSVEENMLKIQNKKRELAAGAFGTKKPNADEMKQAKINEI 1003
Score = 87.8 bits (216), Expect = 8e-17
Identities = 64/219 (29%), Positives = 112/219 (50%), Gaps = 29/219 (13%)
Query: 554 LVVVPSSTLENWLREFNKFCP---HLKVEPYYGSQQERAELRDILEENEGQYDVIVTTYN 610
L++ P S L NW+ +F + HL YYG + R +L + D+++TTYN
Sbjct: 479 LIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIREPA--LLSKQ----DIVLTTYN 532
Query: 611 LAA---GTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQN 667
+ GTK D S L + + V+ DEGH ++N +++ ++ + + R +LTGTP+QN
Sbjct: 533 ILTHDYGTKGD-SPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLESERRWVLTGTPIQN 591
Query: 668 NLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPF 727
+LK+L SLL F+ F+ ++ T+ + T D+G + R ++++K
Sbjct: 592 SLKDLWSLLSFLKLKPFIDREWWHRTIQRPVTM---GDEG--------GLRRLQSLIKNI 640
Query: 728 ILRRKKDQVLK-----HLPRKHNHILHCEMTELQKTLYQ 761
LRR K +K LP + I H +++ ++ +YQ
Sbjct: 641 TLRRTKTSKIKGKPVLELPERKVFIQHITLSDEERKIYQ 679
>YLR032w [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1169
Score = 92.0 bits (227), Expect = 4e-18
Identities = 62/173 (35%), Positives = 96/173 (54%), Gaps = 11/173 (6%)
Query: 871 SGKVEQLKSVLHKIIDIQH-EKVLVFSLFTQVLDILEFVLS-TLN---IKFLRLDGQTQV 925
S K+ L L + D E+V++FS F+ LDILE L+ T + K + DG+ +
Sbjct: 993 SSKITALLKELQLLQDSSAGEQVVIFSQFSTYLDILEKELTHTFSKDVAKIYKFDGRLSL 1052
Query: 926 NDRQSLIDRFYEDDTI--PVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAH 983
+R S++ F D + LLS KAGG G+NL CA++ + D ++P + QA DR H
Sbjct: 1053 KERTSVLADFAVKDYSRQKILLLSLKAGGVGLNLTCASHAYMMDPWWSPSMEDQAIDRLH 1112
Query: 984 RVGQTKEVQVTTLISRDTIEEKILHLAKNKL----ALDTHISQEDKKNEEALE 1032
R+GQT V+V I +D+IEEK+L + + K A+DT + K+ E ++
Sbjct: 1113 RIGQTNSVKVMRFIIQDSIEEKMLRIQEKKRTIGEAMDTDEDERRKRRIEEIQ 1165
Score = 76.6 bits (187), Expect = 2e-13
Identities = 84/332 (25%), Positives = 135/332 (40%), Gaps = 68/332 (20%)
Query: 524 ILADEMGLGKTCQVISFLAYL------------------------------KQTHHNGPH 553
IL+DEMGLGKT S + K+ + +
Sbjct: 529 ILSDEMGLGKTVAAYSLVLSCPHDSDVVDKKLFDIENTAVSDNLPSTWQDNKKPYASKTT 588
Query: 554 LVVVPSSTLENWLREFNKF--CPHLKVEPYYGSQQERAELRDILEENEGQYDVIVTTYNL 611
L+VVP S L W EF K P + E YYG + L+ +L + + V++TTY +
Sbjct: 589 LIVVPMSLLTQWSNEFTKANNSPDMYHEVYYGGNV--SSLKTLLTKTKTPPTVVLTTYGI 646
Query: 612 AAG----------TKYDVSF---LRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRL 658
T DV+ L + NF ++ DEGH ++N + +M + +
Sbjct: 647 VQNEWTKHSKGRMTDEDVNISSGLFSVNFYRIIIDEGHNIRNRTTVTSKAVMALQGKCKW 706
Query: 659 LLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIE 718
+LTGTP+ N L +L SL++F+ + D + KT S + N + A +
Sbjct: 707 VLTGTPIINRLDDLYSLVKFL-------ELDPWRQINYWKTFVSTPFESKN---YKQAFD 756
Query: 719 RAKTMMKPFILRRKKD------QVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRR 772
+++P +LRR K + L LP K I ++ Q LY+ + +
Sbjct: 757 VVNAILEPVLLRRTKQMKDKDGKPLVELPPKEVVIKRLPFSKSQDLLYKFLLDKA---EV 813
Query: 773 KIKEGVKMEKASRNVSKNL--IMALRKASIHP 802
+K G+ + S L I+ LR+ HP
Sbjct: 814 SVKSGIARGDLLKKYSTILVHILRLRQVCCHP 845
>7298963 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 1061
Score = 90.1 bits (222), Expect = 2e-17
Identities = 55/148 (37%), Positives = 85/148 (57%), Gaps = 2/148 (1%)
Query: 871 SGKVEQLKSVLH-KIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQ 929
S K+ + +L I+ +K +V S +T VLDIL LS + L L+G V +RQ
Sbjct: 889 SSKINMVIQILKTSILKSSDDKAIVVSQWTSVLDILRDHLSKDGVATLSLNGTIPVKNRQ 948
Query: 930 SLIDRFYE-DDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQT 988
+++ F + ++ V LLS AGG G+NL+ AN++++ D +NP + QA DR +RVGQ
Sbjct: 949 DIVNEFNDRNNQKRVLLLSLTAGGVGLNLIGANHLLLLDLHWNPQLEAQAQDRIYRVGQK 1008
Query: 989 KEVQVTTLISRDTIEEKILHLAKNKLAL 1016
K V + + DT+E++I L KL L
Sbjct: 1009 KNVIIYKFMCVDTVEQRIKGLQDKKLDL 1036
Score = 79.3 bits (194), Expect = 3e-14
Identities = 100/431 (23%), Positives = 162/431 (37%), Gaps = 88/431 (20%)
Query: 493 PKLLSSD-----VELKDYQQTGINWLHLLYQN-DLSCILADEMGLGKTCQVISFLAYLKQ 546
P++L+ D V L ++Q+ + W+ + ILAD+MGLGKT +IS + K
Sbjct: 425 PEVLAEDPVGLKVSLMNHQKHALAWMSWRERKLPRGGILADDMGLGKTLTMISSVLACKN 484
Query: 547 THH------------------------------------NGPHLVVVPSSTLENWLREFN 570
G LVV P+S L W E
Sbjct: 485 GQEMSEGKDESSDSDSEDDKNKKRKSVTGWKSKGRKDTRRGGTLVVCPASLLRQWESEVE 544
Query: 571 KFCPHLKVEP--YYGSQQERAE--LRDILEENEGQYDVIVTTYNLAAGTKYDVSFLRNRN 626
K+ ++G+ +E LRD YD++VTTY + A +S +
Sbjct: 545 SKVSRQKLTVCVHHGNNRETKGKYLRD--------YDIVVTTYQIVAREHKSLSAVFGVK 596
Query: 627 FDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVS 686
+ ++ DE H+++N S+ + + +R LTGTP+QN ++ +LL+F+ + F
Sbjct: 597 WRRIILDEAHVVRNHKSQSSLAVCDLRGKYRWALTGTPIQNKELDVYALLKFLRCSPF-- 654
Query: 687 KKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQV-----LKHLP 741
DDL T K S + R +MK +LRR K Q+ L LP
Sbjct: 655 --DDLHTWKKWIDNKSAGGQ-----------NRLNLLMKSLMLRRTKAQLQSDGKLNSLP 701
Query: 742 RKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSKNLIMALRKASIH 801
K ++ + + + +YQ VM + R + ++A R N K +
Sbjct: 702 NKELRLIEISLDKEEMNVYQ----TVMTYSRTLFAQFLHQRAERETDFNYRSDANKPT-- 755
Query: 802 PLLFRHIYNDXXXXXXXXXXXXEPEYYENGNIEYIKEDMSYMTDFELHKLCCKFPSLYKF 861
YN E G+ + +K + L ++CC P L
Sbjct: 756 -------YNQIKDPNGAYYKMHEKFARMAGSKKEVKSHDILVLLLRLRQICC-HPGLIDA 807
Query: 862 KLQSDEWMNSG 872
L +E G
Sbjct: 808 MLDGEESQTMG 818
>7291744 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily
Length = 1534
Score = 90.1 bits (222), Expect = 2e-17
Identities = 77/291 (26%), Positives = 123/291 (41%), Gaps = 51/291 (17%)
Query: 523 CILADEMGLGKTCQVISFLAYLKQTHHNGPHLVVVPSSTLENWLREFNKFCPHLKVEPYY 582
CILA MGLGKT QV+SF + L V+P +TL+NWL EFN + P Y
Sbjct: 414 CILAHSMGLGKTLQVVSFCDIFLRHTSAKTVLCVMPINTLQNWLSEFNMWIPR-----YS 468
Query: 583 GSQQERAELRDILEENEGQYD----------------VIVTTYNLAAGTKYDVSFLRNRN 626
R DI N+ Q V++ Y L + R R
Sbjct: 469 TDSNVRPRNFDIFVLNDQQKTLTARAKVILNWVHDGGVLLIGYELFRLLALKLVKTRKRK 528
Query: 627 F---------------------------DVVVYDEGHMLKNSMSERFNKLMKINAHFRLL 659
D+V+ DEGH +KNS + L +I R++
Sbjct: 529 GSVIRPDGMDSSSDLMNLVYEALVKPGPDLVICDEGHRIKNSHAGISLALKEIRTRRRIV 588
Query: 660 LTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSD-ADKGYNPL-LAEHAI 717
LTG PLQNNL E +++F+ PN ++ + + +F++ + D + + L +
Sbjct: 589 LTGYPLQNNLLEYWCMVDFVRPN-YLGTRTEFCNMFERPIQNGQCVDSTPDDIKLMRYRA 647
Query: 718 ERAKTMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVM 768
+++ F+ RR + LP+K+ +++ +MT Q+ LY + V+
Sbjct: 648 HVLHSLLLGFVQRRSHTVLQLTLPQKYEYVILVKMTAFQRKLYDTFMTDVV 698
>CE17314 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 1359
Score = 89.4 bits (220), Expect = 3e-17
Identities = 149/676 (22%), Positives = 258/676 (38%), Gaps = 124/676 (18%)
Query: 205 KVSQPSPARSMADRTTMSTI--------KNLSSKKGKLVR-------GDAIKKKQKIKLS 249
KV Q +S RTT S+ + S KK K + + ++++K+K S
Sbjct: 109 KVDQKKKEKSKKKRTTSSSEDEDSDEEREQKSKKKSKKTKKQTSSESSEESEEERKVKKS 168
Query: 250 DDEEDEITDQSNDDGELDTEPEYEEKVTESNFDQVLKFLNEADPKDLADLGEISIEKAAL 309
+++ + + E E E K ++ + K +E++ +D ++ + + +
Sbjct: 169 KKNKEKSVKKRAETSEESDEDEKPSKKSKKGLKKKAKSESESESEDEKEVKKSKKKSKKV 228
Query: 310 VIKERPFED-------LEQFQQLDFQSKSPSPAPGKARKSQQKKDGLKILDKIEQSIKGY 362
V KE ED E+ ++ S+ S + + ++K+ K K ++K
Sbjct: 229 VKKESESEDEAPEKKKTEKRKRSKTSSEESSESEKSDEEEEEKESSPKPKKKKPLAVKKL 288
Query: 363 NAIESLIRKCSKYGDV-IANQMTNWGV-----DFSSSKD--TELNILDVDT-YSDDEANE 413
++ E S+ DV + Q G D KD +E DV+ S +A +
Sbjct: 289 SSDEE-----SEESDVEVLPQKKKRGAVTLISDSEDEKDQKSESEASDVEEKVSKKKAKK 343
Query: 414 TITNDSANVQIIKSSTTSRENSLGPSKRKRNXXXXXXXXXXXXXXXXXXXXXKPRARTKQ 473
+++S + S T +R++ K+ K R + +
Sbjct: 344 QESSESGSDSSEGSITVNRKSKKKEKPEKKKKGIIMDSSKLQKETIDAERAEKERRKRLE 403
Query: 474 KKTS------------ITQL-----RNNQMKFIRQKPKLLSSDVE--------------L 502
KK +T++ ++K + P + D E L
Sbjct: 404 KKQKEFNGIVLEEGEDLTEMLTGTSSQRKLKSVVLDPDSSTVDEESKKPVEVHNSLVRIL 463
Query: 503 KDYQQTGINWLH--------LLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHHNGPH- 553
K +Q GI +++ L ILA MGLGKT QVI+FL + G
Sbjct: 464 KPHQAHGIQFMYDCAFESLDRLDTEGSGGILAHCMGLGKTLQVITFLHTVLMHEKIGEKC 523
Query: 554 ---LVVVPSSTLENWLREFNKFCPHL----------KVEPYYGSQQERAELRDILEENEG 600
LVVVP + + NW +EF K+ +++ Y + R L+ +
Sbjct: 524 KRVLVVVPKNVIINWFKEFQKWLVDNDEELDTIDVNELDSYKTIEDRRRALK--AWHSSK 581
Query: 601 QYDVIVTTYNL---------------------AAGTKYDV-SFLRNRNFDVVVYDEGHML 638
V++ Y+L K D +L+N D+VV DE H L
Sbjct: 582 TPSVMIIGYDLFRILTVEDDPKKKKPKNRNRRLEKAKEDFRKYLQNPGPDMVVCDEAHKL 641
Query: 639 KNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFK-- 696
KN S ++KI R+ LTGTPLQNNL E ++ F+ P L + K + A F
Sbjct: 642 KNDDSALSKCMVKILTKRRICLTGTPLQNNLMEYHCMVNFVKPGL-LGTKTEFANRFVNI 700
Query: 697 -QKTRTSDADKGYNPLLAEHAIERAKTM---MKPFILRRKKDQVLKHLPRKHNHILHCEM 752
+ RT DA +PL R + +K + R+ + + +P K ++++
Sbjct: 701 INRGRTKDA----SPLEVSFMKRRCHVLYDHLKKCVDRKDYRVLTEAIPPKQEYVINVRQ 756
Query: 753 TELQKTLYQQEIKQVM 768
TE Q LY + ++
Sbjct: 757 TERQCALYNAFLNDIV 772
Score = 75.9 bits (185), Expect = 3e-13
Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 29/203 (14%)
Query: 866 DEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSL----FTQVLDILEFVLST---------- 911
D++ S K+ L ++ K +I +K+LVFS T + +LE++ T
Sbjct: 941 DDFALSNKLILLVEIIKKCEEIG-DKLLVFSQSLESLTLIKRMLEYMAGTGQWFADGHEA 999
Query: 912 LNIK------------FLRLDGQTQVNDRQSLIDRFYEDDTIP--VFLLSTKAGGFGINL 957
LN + ++ +DG Q R ++ F + + + L+ST+AG G N+
Sbjct: 1000 LNAEGEETWSWLEGEDYMTIDGSVQSGKRDAVQTSFNDPLNLRARLMLISTRAGSLGTNM 1059
Query: 958 VCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALD 1017
V AN VIIFD +NP D Q+ R +R GQTK V + I++ T+EE+I K +
Sbjct: 1060 VAANRVIIFDACWNPSHDTQSLFRVYRFGQTKPVYIYRFIAQGTMEERIYKRQVTKESTS 1119
Query: 1018 THISQEDKKNEEALENKVTDLLE 1040
+ E + L N +T+L +
Sbjct: 1120 MRVVDEAQIQRHYLGNDLTELYQ 1142
>At1g48310 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 675
Score = 86.7 bits (213), Expect = 2e-16
Identities = 46/124 (37%), Positives = 71/124 (57%)
Query: 891 KVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKA 950
K LVF+ +L+ L L + +R+DG T + RQ+L+ F + D I +LS +A
Sbjct: 524 KFLVFAHHQSMLEELHQFLKKKKVGCIRIDGSTPASSRQALVSDFQDKDEIKAAVLSIRA 583
Query: 951 GGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLA 1010
G GI L A+ VI + S+ P D QA DRAHR+GQ V + L++ DT+++ I +
Sbjct: 584 AGVGITLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLANDTVDDIIWDVV 643
Query: 1011 KNKL 1014
++KL
Sbjct: 644 QSKL 647
>CE27689 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 689
Score = 86.3 bits (212), Expect = 2e-16
Identities = 85/322 (26%), Positives = 136/322 (41%), Gaps = 46/322 (14%)
Query: 475 KTSITQLRNNQMKFIRQKPKLLSSDVE----------LKDYQQTGINWLHLLYQNDLSCI 524
K + L N + KPK SD+ L YQ+ G+ + + D +
Sbjct: 162 KVELEPLPQNIIGLTNFKPKAAPSDLNTVMDPSLIERLFPYQKEGVIFA---LERDGRIL 218
Query: 525 LADEMGLGKTCQVISFLAYLKQTHHNGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGS 584
LADEMGLGK+ Q ++ Y K + P L+V P+S W ++ N F P + +
Sbjct: 219 LADEMGLGKSVQALTIARYYKA---DWPLLIVCPASVKGAWKKQLNTFFP--IIHRIFIV 273
Query: 585 QQERAELRDILEENEGQYDVIVTTYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSE 644
+ L D+ N V + +Y K+D+ L+ + +++DE HMLK+ +
Sbjct: 274 DKSSDPLPDVCTSN----TVAIMSYEQMV-LKHDI--LKKEKYRTIIFDESHMLKDGKAR 326
Query: 645 R---FNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRT 701
R L K+ H +LL+GTP + EL + + I LF + + R
Sbjct: 327 RTKVATDLSKVALHV-ILLSGTPALSRPSELFTQIRLIDHKLFTN-------FHEFAIRY 378
Query: 702 SDADKG---YNPLLAEHAIERAKTMMKPFILRRKKDQVLKHLPRKHNHILH-------CE 751
D +G + ++ E A M K ++RR K VLK LP K +++
Sbjct: 379 CDGKQGRFCFEAKGCTNSEELAAIMFKRLMIRRLKADVLKDLPEKRREVVYVSGPTIDAR 438
Query: 752 MTELQKTLYQQEIKQVMEHRRK 773
M +LQK E ME + +
Sbjct: 439 MDDLQKARADYEKVNSMERKHE 460
Score = 83.6 bits (205), Expect = 2e-15
Identities = 49/129 (37%), Positives = 73/129 (55%)
Query: 886 DIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFL 945
D KVL+F+ VLD ++ ++ + +R+DG+T + R +L D F DD I V +
Sbjct: 489 DAPPRKVLIFAHHQIVLDTIQVEVNKRKLGSIRIDGKTPSHRRTALCDSFQTDDNIRVAV 548
Query: 946 LSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEK 1005
LS A G GI L A+ V+ + FNP QA DRAHRVGQ V V LI++ T ++
Sbjct: 549 LSITAAGVGITLTAASVVVFAEIHFNPGYLVQAEDRAHRVGQKDSVFVQYLIAKKTADDV 608
Query: 1006 ILHLAKNKL 1014
+ ++ + KL
Sbjct: 609 MWNMVQQKL 617
>CE27688 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 687
Score = 86.3 bits (212), Expect = 2e-16
Identities = 85/322 (26%), Positives = 136/322 (41%), Gaps = 46/322 (14%)
Query: 475 KTSITQLRNNQMKFIRQKPKLLSSDVE----------LKDYQQTGINWLHLLYQNDLSCI 524
K + L N + KPK SD+ L YQ+ G+ + + D +
Sbjct: 160 KVELEPLPQNIIGLTNFKPKAAPSDLNTVMDPSLIERLFPYQKEGVIFA---LERDGRIL 216
Query: 525 LADEMGLGKTCQVISFLAYLKQTHHNGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGS 584
LADEMGLGK+ Q ++ Y K + P L+V P+S W ++ N F P + +
Sbjct: 217 LADEMGLGKSVQALTIARYYKA---DWPLLIVCPASVKGAWKKQLNTFFP--IIHRIFIV 271
Query: 585 QQERAELRDILEENEGQYDVIVTTYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSE 644
+ L D+ N V + +Y K+D+ L+ + +++DE HMLK+ +
Sbjct: 272 DKSSDPLPDVCTSN----TVAIMSYEQMV-LKHDI--LKKEKYRTIIFDESHMLKDGKAR 324
Query: 645 R---FNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRT 701
R L K+ H +LL+GTP + EL + + I LF + + R
Sbjct: 325 RTKVATDLSKVALHV-ILLSGTPALSRPSELFTQIRLIDHKLFTN-------FHEFAIRY 376
Query: 702 SDADKG---YNPLLAEHAIERAKTMMKPFILRRKKDQVLKHLPRKHNHILH-------CE 751
D +G + ++ E A M K ++RR K VLK LP K +++
Sbjct: 377 CDGKQGRFCFEAKGCTNSEELAAIMFKRLMIRRLKADVLKDLPEKRREVVYVSGPTIDAR 436
Query: 752 MTELQKTLYQQEIKQVMEHRRK 773
M +LQK E ME + +
Sbjct: 437 MDDLQKARADYEKVNSMERKHE 458
Score = 83.6 bits (205), Expect = 2e-15
Identities = 49/129 (37%), Positives = 73/129 (55%)
Query: 886 DIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFL 945
D KVL+F+ VLD ++ ++ + +R+DG+T + R +L D F DD I V +
Sbjct: 487 DAPPRKVLIFAHHQIVLDTIQVEVNKRKLGSIRIDGKTPSHRRTALCDSFQTDDNIRVAV 546
Query: 946 LSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEK 1005
LS A G GI L A+ V+ + FNP QA DRAHRVGQ V V LI++ T ++
Sbjct: 547 LSITAAGVGITLTAASVVVFAEIHFNPGYLVQAEDRAHRVGQKDSVFVQYLIAKKTADDV 606
Query: 1006 ILHLAKNKL 1014
+ ++ + KL
Sbjct: 607 MWNMVQQKL 615
>Hs20538502 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily
Length = 1359
Score = 85.9 bits (211), Expect = 3e-16
Identities = 72/294 (24%), Positives = 123/294 (41%), Gaps = 55/294 (18%)
Query: 523 CILADEMGLGKTCQVISFLAYLKQTHHNGPHLVVVPSSTLENWLREFNKFCP-------- 574
CILA MGLGKT QVISF+ L + L +VP +TL+NWL EFN + P
Sbjct: 193 CILAHSMGLGKTLQVISFIDVLFRHTPAKTVLAIVPVNTLQNWLAEFNMWLPPPEALPAD 252
Query: 575 ---------HLKVEPYYGSQQERAELRDILEENEGQYDVIVTTYNLAAGTKYDVSF---- 621
KV + A ++ + + V++ Y + SF
Sbjct: 253 NKPEEVQPRFFKVHILNDEHKTMASRAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATGR 312
Query: 622 ---LRNRNFDVVV-YDE---------------------------GHMLKNSMSERFNKLM 650
+ R+ V++ DE GH +KN + L
Sbjct: 313 PKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQALK 372
Query: 651 KINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDA--DKGY 708
I + R++LTG PLQNNL E +++F+ P+ F+ + + + +F++
Sbjct: 373 NIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPD-FLGTRQEFSNMFERPILNGQCIDSTPQ 431
Query: 709 NPLLAEHAIERAKTMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQ 762
+ L + ++++ F+ RR + HLP K +++ ++++Q+ LY Q
Sbjct: 432 DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQ 485
Score = 84.3 bits (207), Expect = 9e-16
Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 21/157 (13%)
Query: 870 NSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLS------------------T 911
NS K+ L ++ + + + +K+LVFS L ++E L
Sbjct: 611 NSPKMVLLFHLIEESVKLG-DKILVFSQSLSTLALIEEFLGKREVPCPPGTEGQGAQKWV 669
Query: 912 LNIKFLRLDGQTQVNDRQSLIDRFYEDDTIP--VFLLSTKAGGFGINLVCANNVIIFDQS 969
NI + RLDG T +R+ LI++F + + +FLLST+AG G+NL+ AN V++FD S
Sbjct: 670 RNISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVFDAS 729
Query: 970 FNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKI 1006
+NP D QA R +R GQ K + L++ T+E+KI
Sbjct: 730 WNPCHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKI 766
>At5g07810 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 1178
Score = 85.5 bits (210), Expect = 4e-16
Identities = 122/507 (24%), Positives = 194/507 (38%), Gaps = 96/507 (18%)
Query: 523 CILADEMGLGKTCQVISFLAYLKQTHHNGPHLVVVPSSTLENWLREFNKFCPHL---KVE 579
C +ADEMGLGKT Q I+ G LVV P+ W E ++ P V
Sbjct: 222 CFIADEMGLGKTLQAIAIAGCFIS---EGSILVVCPAVLRFTWAEELERWLPSCLPSDVH 278
Query: 580 PYYGSQQERAELRDILEENEGQYDVIVTTYNLAAGTKYDVSFLRNRNFDVVVYDEGHML- 638
+G Q A L + V+V +Y + + + + R + +++ DE H L
Sbjct: 279 LVFGHQDNPAYLPRWPK-------VVVISYKMLQHLR---TTMLEREWALLIVDESHHLR 328
Query: 639 ---KNSMSERFNKLMKINAHFR--LLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLAT 693
K S ++ + + +LL+GTP + P L K + A
Sbjct: 329 CSKKKSDPPEIKTVLDVAEKVKHIILLSGTPSVSR------------PGLLGKDKYEFAK 376
Query: 694 VFK--------QKTRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQVLKHLPRKHN 745
+ Q D KG L E I +T+M +RR K +L LP K
Sbjct: 377 TYCEVGLVRGIQGKIFQDFSKGTR--LLELNILLNQTVM----IRRLKQHLLTQLPPKRR 430
Query: 746 HILHCEMTELQKTLYQQEIKQVMEHRRKIKEGVKMEKASRNVSKNLIMALRKASIHPLLF 805
I+ T L K ++ +K K+G E ++
Sbjct: 431 QIV----TILLKKSDIALAMAIVSEAKKQKDGAIAEVTEKS------------------- 467
Query: 806 RHIYNDXXXXXXXXXXXXEPEYYENGNIE---YIKEDMSYMTDFELHKLCCK--FPSLYK 860
EP+ G+ E E+ + ++LC K + L
Sbjct: 468 -----------------HEPDQNARGSNEAGHVNAENSDGPNSDKENQLCGKLSYQQLGI 510
Query: 861 FKLQS-DEWMNSGKVEQLKSVLHKIIDIQHE--KVLVFSLFTQVLDILEFVLSTLNIKFL 917
KL + EW++ + + ID K++VF+ +VLD ++ + I F+
Sbjct: 511 AKLSAFREWLSLHPLLSGLDYTPEEIDGDRSSTKMVVFAHHHKVLDGIQEFICDKGIGFV 570
Query: 918 RLDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQ 977
R+DG T DRQ + F + + ++ +AGG G++ A NV+ + P Q
Sbjct: 571 RIDGTTLPRDRQLAVQSFQFSSEVKIAIIGVEAGGVGLDFSAAQNVVFLELPKTPSLLLQ 630
Query: 978 AADRAHRVGQTKEVQVTTLISRDTIEE 1004
A DRAHR GQT V V ++DT++E
Sbjct: 631 AEDRAHRRGQTSAVNVYIFCAKDTMDE 657
>7296909 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 701
Score = 84.0 bits (206), Expect = 1e-15
Identities = 44/126 (34%), Positives = 72/126 (56%)
Query: 888 QHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLS 947
+ +K ++F+ ++D + LS L + ++R+DGQT+ + R +D F + + V LLS
Sbjct: 534 EQKKFIIFAHHRVMMDAISDFLSGLKVHYIRIDGQTRSDHRSDSVDTFQKKSSCKVALLS 593
Query: 948 TKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKIL 1007
KA GI L A ++ + +NP QA RAHR+GQTK V LI+ +T ++ I
Sbjct: 594 LKACNSGITLTAAEIIVFAELDWNPSTLAQAESRAHRIGQTKPVICRYLIAHNTADDIIW 653
Query: 1008 HLAKNK 1013
++ KNK
Sbjct: 654 NMLKNK 659
Score = 67.0 bits (162), Expect = 1e-10
Identities = 73/264 (27%), Positives = 118/264 (44%), Gaps = 45/264 (17%)
Query: 492 KPKLLSSDVELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHHNG 551
+PKL +L +QQ G+ + + C DEMGLGKT Q ++ Y K +
Sbjct: 240 EPKLAD---QLMPFQQDGVCFAIAQKGRIMIC---DEMGLGKTYQALAVADYFKD---DW 290
Query: 552 PHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENE---GQYDVIVTT 608
P LV +ST ++W + P KV +Y +L N+ G+ V++T+
Sbjct: 291 PLLVCTTASTRDSWAKHIMDLLP--KVPIHY---------VQVLNNNQLYVGEAKVLITS 339
Query: 609 YNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFR--LLLTGTPLQ 666
YN+ + L R F +++DE H LKNS ++ ++ + +LL+GTP
Sbjct: 340 YNM---MERHEDKLMQRKFGFIIFDESHTLKNSKAKCTTTAKRLTDQAKRVVLLSGTPAL 396
Query: 667 NNLKELMSLLEFIMPNL-----FVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAK 721
+ EL + L+ I F ++ D KQ T DA+ N +E K
Sbjct: 397 SRPLELFTQLQMIDGKFMNFMEFTTRYCD----GKQSTFGWDANGQSN-------LEELK 445
Query: 722 TMMK-PFILRRKKDQVLKHLPRKH 744
++ ++LRR K +VL L K+
Sbjct: 446 VILHLKYMLRRTKVEVLPQLAEKN 469
>7298962 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 965
Score = 83.2 bits (204), Expect = 2e-15
Identities = 49/154 (31%), Positives = 86/154 (55%)
Query: 871 SGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQS 930
S K++ + L +++ ++K++V S + L I+ L L+ + L +GQ +R+
Sbjct: 789 SAKLKMVIDKLEELLTGTNDKIIVTSQWVSYLAIVRKRLQDLSWETLDFNGQLTAKEREI 848
Query: 931 LIDRFYEDDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKE 990
++ F ++ V LLS AGG G+NL AN+++I D +NP +RQA DR +R GQTK
Sbjct: 849 VLRDFNANNEKRVLLLSLTAGGVGLNLNVANHMLIVDLHWNPQLERQAQDRIYRYGQTKP 908
Query: 991 VQVTTLISRDTIEEKILHLAKNKLALDTHISQED 1024
+ + +DT+E++I L KL + + E+
Sbjct: 909 TFIYRYMCQDTVEQRIKSLQDCKLEIAKVVLPEE 942
Score = 62.4 bits (150), Expect = 4e-09
Identities = 57/219 (26%), Positives = 103/219 (47%), Gaps = 33/219 (15%)
Query: 554 LVVVPSSTLENWLREF-NKFCPH-LKVEPYYGSQQERAELRDILEENEGQYDVIVTTYNL 611
LVV P S + W E +K + ++V ++G + + E YD+++T+YNL
Sbjct: 393 LVVCPMSVMCQWAHEVASKVAQNAIRVLTFHGPNRHEIGI-----EAFRSYDLVITSYNL 447
Query: 612 AAGT--KY-DVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNN 668
+Y + S L ++ V+ DE H+++NS + N + ++ AH LTGTP+QN
Sbjct: 448 VVNELKRYGNTSPLFAVYWNRVILDEAHIIRNSKTNCCNSVCQLRAHCHWALTGTPVQNR 507
Query: 669 LKELMSLLEFI-MPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHAIERAKTMMKPF 727
++ +LL F+ +PN DL K N + H R ++KP
Sbjct: 508 GVDVFALLRFVNVPNF-----QDL----------QQWKKNLNESMLGH--RRLNFIIKPL 550
Query: 728 ILRRKKDQV-----LKHLPRKHNHILHCEMTELQKTLYQ 761
+LRR K ++ + LP ++ ++++ + +YQ
Sbjct: 551 MLRRTKQKLQASGDMPALPSLKIELICVQLSKTEMAVYQ 589
>CE11450 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 518
Score = 80.1 bits (196), Expect = 2e-14
Identities = 41/102 (40%), Positives = 64/102 (62%), Gaps = 1/102 (0%)
Query: 916 FLRLDGQTQVNDRQSLIDRF-YEDDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHD 974
+ + G+ + DRQ +D F E LLS AGG G+NL+ N++I+ D +NP
Sbjct: 382 YTSITGEVAIKDRQERVDSFNQEKGGAQDMLLSLTAGGVGLNLIGGNHLIMVDLHWNPAL 441
Query: 975 DRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLAL 1016
++QA DR +R+GQ KEV + LI ++TIE++++ L + KLAL
Sbjct: 442 EQQACDRIYRMGQKKEVHIHRLIVKETIEQRVMSLQEKKLAL 483
Score = 61.2 bits (147), Expect = 8e-09
Identities = 53/194 (27%), Positives = 94/194 (48%), Gaps = 18/194 (9%)
Query: 500 VELKDYQQTGINWLHLLYQNDLSC-ILADEMGLGKTCQVISFLAYLK---QTHHNGPHLV 555
V+L +Q+ G+ WL S IL +MGLGKT +IS + + K +T +
Sbjct: 142 VDLMPHQKAGLCWLLWRESQPHSGGILGGDMGLGKTLSMISLIVHQKAARKTRKDAGDDA 201
Query: 556 VVPSSTLENWLREFNKFCPH--LKVEPYYGSQQERAELRDILEENEGQYDVIVTTYNLAA 613
+ P S + +W E + L V Y+G+++ +D+ + E YD + +N +
Sbjct: 202 IAPESLVHHWEAEIARRLKQDLLSVLVYHGNRRH-INPKDLKKHIELDYD-LEDEHNPCS 259
Query: 614 GTKYDVSFLRNRN--------FDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPL 665
+ V ++N + V+ DE H++KN ++ KI+A R L+GTP+
Sbjct: 260 KLRPRVCPKADKNSSPLARIAWSYVILDEAHIIKNRNAQCSEAACKISAFSRWCLSGTPI 319
Query: 666 QNNL--KELMSLLE 677
NN+ K+++ L+E
Sbjct: 320 HNNMRRKKIVHLME 333
>At2g40770 [L] KOG0298 DEAD box-containing helicase-like transcription
factor/DNA repair protein
Length = 1648
Score = 76.6 bits (187), Expect = 2e-13
Identities = 53/169 (31%), Positives = 86/169 (50%), Gaps = 15/169 (8%)
Query: 876 QLKSVLHKIIDIQHE----KVLVFSLFTQVLDILEFVLSTLNIKFLRLDG----QTQVN- 926
++++V +I+ I+ KVLVFS + VLD+LE + +I +R+ G QT ++
Sbjct: 1416 KIEAVTRRILWIKSSDPQTKVLVFSSWNDVLDVLEHAFAANSITCIRMKGGRKSQTAISK 1475
Query: 927 ------DRQSLIDRFYEDDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAAD 980
+ Q E+ +I V LL + G G+NL+ A +VI+ + NP + QA
Sbjct: 1476 FKGSEKETQKTNSHQKEEKSIQVLLLLVQHGANGLNLLEAQHVILVEPLLNPAAEAQAVG 1535
Query: 981 RAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQEDKKNEE 1029
R HR+GQ K V + T+EE I L +NK + S + KN++
Sbjct: 1536 RVHRIGQEKPTLVHRFLVSGTVEESIYKLNRNKNTNLSSFSSRNTKNQD 1584
>ECU06g0820 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 556
Score = 74.7 bits (182), Expect = 7e-13
Identities = 43/142 (30%), Positives = 75/142 (52%), Gaps = 1/142 (0%)
Query: 873 KVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLI 932
KV+ +K L +++ + K +VF T++++ LE + N+ +R+DG R L+
Sbjct: 379 KVDPVKQYLATMVE-KGMKFVVFCHHTEMMESLEGFFAERNVPMIRIDGSVPSTSRHLLV 437
Query: 933 DRFYEDDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQ 992
+F E++ + V LLS A G+ L V+ + +NP QA DR HR+GQ V
Sbjct: 438 KKFQENEEVMVALLSITACSTGLTLTAGRAVVFAELYWNPGVLLQAEDRIHRIGQKSSVD 497
Query: 993 VTTLISRDTIEEKILHLAKNKL 1014
+ L+++ TI+E + +KL
Sbjct: 498 IIYLVAKGTIDEYVWPKLLSKL 519
Score = 57.0 bits (136), Expect = 2e-07
Identities = 66/266 (24%), Positives = 119/266 (43%), Gaps = 35/266 (13%)
Query: 524 ILADEMGLGKTCQVISFLAYLKQTHHNGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYG 583
I+AD+MGLGKT Q ++ Y + P +++ P+S LE+W +F
Sbjct: 143 IVADDMGLGKTIQALAVAYYYRA---EWPLVIIAPASLLEDWADACRRFL---------- 189
Query: 584 SQQERAELRDILEENEGQYDVIVTTYNLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMS 643
E +R +E+ GQ ++ V +Y +A+ ++ VV+ DE H LK+ +
Sbjct: 190 -GMEAMVMR--RKEDFGQ-EIGVVSYEVASSHANVLAC----GAGVVIADECHYLKSLQT 241
Query: 644 ERFNKLMKI--NAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRT 701
+R ++ + LLL+GTP + EL ++ + +F A +
Sbjct: 242 KRTKAIVPLLQKVSRALLLSGTPAVSRPLELYPIISAVDRTIF----PRFAEYGARYCNG 297
Query: 702 SDADKGYNPLLAEHAIERAKTMMKPFILRRKKDQVLKHLPRKHNH--ILHC--EMTELQK 757
+ Y+ +A E + K ++RR KD+VL LP K +L C + +K
Sbjct: 298 RKVGQWYDYKGCSNAEELHYVLRKFLMIRRTKDEVLGQLPPKFRRQVVLECTGRQDDPRK 357
Query: 758 TLYQQEI--KQVMEHRRKIKEGVKME 781
L + + VM++R + G+K++
Sbjct: 358 DLVGESVDTNVVMQYREAV--GLKVD 381
>SPAC13G6.01c [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 104
Score = 73.2 bits (178), Expect = 2e-12
Identities = 37/91 (40%), Positives = 55/91 (59%)
Query: 938 DDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLI 997
D + V ++S KAGG G+NL CAN+V I D ++ + QA DR HR+GQ K V VT I
Sbjct: 1 DPDVNVLIISLKAGGVGLNLTCANHVFIMDPWWSWSVEAQAIDRIHRLGQEKPVFVTRYI 60
Query: 998 SRDTIEEKILHLAKNKLALDTHISQEDKKNE 1028
RDT+EE++L + + K + + + K +
Sbjct: 61 VRDTVEERMLKIQERKNFITGTLGMSEGKQQ 91
>Hs21071060 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 954
Score = 72.4 bits (176), Expect = 3e-12
Identities = 54/180 (30%), Positives = 92/180 (51%), Gaps = 16/180 (8%)
Query: 876 QLKSVLHKIIDIQH---EKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLI 932
++ SV+ I+D+ EK LVF+ VLD + L +++ +R+DG T +R+ L
Sbjct: 709 KIPSVIEYILDLLESGREKFLVFAHHKVVLDAITQELERKHVQHIRIDGSTSSAEREDLC 768
Query: 933 DRFYEDDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQ 992
+F + V +LS A G+ A+ V+ + +NP QA DR HR+GQT V
Sbjct: 769 QQFQLSERHAVAVLSITAANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVG 828
Query: 993 VTTLISRDT--------IEEKILHLAKNKLALDTHISQ----EDKKNEEALENKVTDLLE 1040
+ L+++ T I+EKI LA+ L+ +T+ S+ D ++ + K+ DL +
Sbjct: 829 IHYLVAKGTADDYLWPLIQEKIKVLAEAGLS-ETNFSEMTESTDYLYKDPKQQKIYDLFQ 887
Score = 68.9 bits (167), Expect = 4e-11
Identities = 79/273 (28%), Positives = 114/273 (40%), Gaps = 57/273 (20%)
Query: 493 PKLLSSDVELKDYQQTGINWLHLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHHNGP 552
PKL+S+ L +Q+ G+N+ +LAD+MGLGKT Q I A+ ++ P
Sbjct: 430 PKLVSN---LMPFQRAGVNFA---IAKGGRLLLADDMGLGKTIQAICIAAFYRK---EWP 480
Query: 553 HLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQYDVIVTTYN-L 611
LVVVPSS W + F ++ P L + +V+VT + L
Sbjct: 481 LLVVVPSSVRFTWEQAFLRWLPSLSPD---------------------CINVVVTGKDRL 519
Query: 612 AAGTKYDVSF--------LRNRNFDVVVYDEGHMLKNSMSERFNKLMKI--NAHFRLLLT 661
AG VSF F VV+ DE H LKNS + R M + A +LL+
Sbjct: 520 TAGLINIVSFDLLSKLEKQLKTPFKVVIIDESHFLKNSRTARCRAAMPVLKVAKRVILLS 579
Query: 662 GTPLQNNLKELMSLLEFIMPNLFVS------KKDDLATVFKQKTRTSDADKGYNPLLAEH 715
GTP + EL + + + P F + D + + ++ G LL E
Sbjct: 580 GTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRMPWGWDYSGSSNLGELKLLLEE 639
Query: 716 AIERAKTMMKPFILRRKKDQVLKHLPRKHNHIL 748
A+ +LRR K VL LP K I+
Sbjct: 640 AV----------MLRRLKSDVLSQLPAKQRKIV 662
>At3g16600 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 638
Score = 72.0 bits (175), Expect = 5e-12
Identities = 34/69 (49%), Positives = 50/69 (72%)
Query: 945 LLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEE 1004
L+S KAG G+N+V A++VI+ D +NP + QA DRAHR+GQT+ V VT + ++T+EE
Sbjct: 511 LMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAIDRAHRIGQTRAVTVTRIAIKNTVEE 570
Query: 1005 KILHLAKNK 1013
+IL L + K
Sbjct: 571 RILTLHERK 579
Score = 70.5 bits (171), Expect = 1e-11
Identities = 69/276 (25%), Positives = 116/276 (42%), Gaps = 58/276 (21%)
Query: 500 VELKDYQQTGINWLHLLYQNDLSC---ILADEMGLGKTCQVISFLAYLK----------Q 546
V L +Q+ +NW+ + C ILAD+ GLGKT IS + K +
Sbjct: 51 VPLMRHQKIALNWMRKKEKRSRHCLGGILADDQGLGKTISTISLILLQKLKSQSKQRKRK 110
Query: 547 THHNGPHLVVVPSSTLENWLREFNKFCPH---LKVEPYYGSQQERAELRDILEENEGQYD 603
++G L+V P+S ++ W RE + L V ++GS + + + YD
Sbjct: 111 GQNSGGTLIVCPASVVKQWAREVKEKVSDEHKLSVLVHHGSHRTKDPTEIAI------YD 164
Query: 604 VIVTTYNLAAG--------TKYD-----------------VSFLRNRNFDVVVYDEGHML 638
V++TTY + +YD V L + VV DE H +
Sbjct: 165 VVMTTYAIVTNEVPQNPMLNRYDSMRGRESLDGSSLIQPHVGALGRVRWLRVVLDEAHTI 224
Query: 639 KNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQK 698
KN + + A R LTGTP++N + +L S F+ + + + F Q+
Sbjct: 225 KNHRTLIAKACFSLRAKRRWCLTGTPIKNKVDDLYSYFRFLRYHPYA-----MCNSFHQR 279
Query: 699 TRTSDADKGYNPLLAEHAIERAKTMMKPFILRRKKD 734
+ + DK PL H ++ + +++ +LRR K+
Sbjct: 280 IK-APIDK--KPL---HGYKKLQAILRGIMLRRTKE 309
>SPAC144.05 [L] KOG0298 DEAD box-containing helicase-like transcription
factor/DNA repair protein
Length = 1375
Score = 69.7 bits (169), Expect = 2e-11
Identities = 46/148 (31%), Positives = 74/148 (49%), Gaps = 10/148 (6%)
Query: 889 HEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLST 948
+ KV+VFS + VLD+L I F+R DG++ + + + RF E+ ++ V L
Sbjct: 1204 YPKVVVFSQWLDVLDVLHKSFEANGIVFIRFDGKS----KNTCLKRFKEERSLQVLTLHA 1259
Query: 949 KAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILH 1008
++ G+ L A +V + + N + QA R HR+GQT+ V I DT+E IL+
Sbjct: 1260 RSQSSGLTLTNATHVFMCEPLLNSGIEMQAISRVHRIGQTRPTFVYYYIVEDTVEGHILN 1319
Query: 1009 LA------KNKLALDTHISQEDKKNEEA 1030
L+ +KL LD + + EA
Sbjct: 1320 LSLTKHEQLDKLGLDVPLVGNINRTTEA 1347
Score = 60.8 bits (146), Expect = 1e-08
Identities = 68/327 (20%), Positives = 135/327 (40%), Gaps = 59/327 (18%)
Query: 514 HLLYQNDL-SCILADEMGLGKTCQVISFLAYL-----------------KQTHHNGPHLV 555
+LL D+ ILADEMG+GKT +V+ + + K ++ L+
Sbjct: 276 YLLASGDIRGGILADEMGMGKTLEVLGLVLHHQLPISLTDTCTFDQVVGKNVKYSKATLI 335
Query: 556 VVPSSTLENWLREFNKFCPHLKVEPYYGSQQERA--ELRDILEENEGQYDVIVTTY-NLA 612
+ PS+ L+ WL E + P LKV Y G ++ + L+ D++VT+Y +L
Sbjct: 336 ITPSTILDQWLSEIDLHVPSLKVFHYQGIRKSNGLKSAKIFLD-----CDIVVTSYSDLR 390
Query: 613 AGTKYDVSFLRNRNFDV----------------VVYDEGHMLKNSMSERFNKLMKINAHF 656
Y S R + + DE M++ S S + +I
Sbjct: 391 FELLYTESHSRTLRHEKRHVSPKSPLIDVCWWRICVDEAQMVETSQSNVAQMIYRIPRVN 450
Query: 657 RLLLTGTPLQNNLKELMSLLEFIMPN-LFVSKKDDLATVFKQKTRTSDADKGYNPLLAEH 715
++GTP+++ + +L LL + + +++ KK + ++K R + + L+ H
Sbjct: 451 CWTVSGTPVRSEVDDLFGLLFLLRYSPMYLYKKQAWMQIIEKK-RVREFCDLFGSLVCRH 509
Query: 716 AIERAKTMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKIK 775
+ + + +K LP +H + ++ +++T YQ + + + K
Sbjct: 510 SKQDVEEELK--------------LPPQHRICMTTRLSVVEETNYQDLLSEAAKSLHFFK 555
Query: 776 EGVKMEKASRNVSKNLIMALRKASIHP 802
+ ++ + ++ LR+A HP
Sbjct: 556 DR-NLDLCDEESMRRWLVRLRQACCHP 581
>Hs22048060 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 122
Score = 68.2 bits (165), Expect = 7e-11
Identities = 37/68 (54%), Positives = 43/68 (62%), Gaps = 1/68 (1%)
Query: 522 SCILADEMGLGKTCQVISFLAYLKQTHH-NGPHLVVVPSSTLENWLREFNKFCPHLKVEP 580
S ILADEMGLGKT QVISFL+YL H GP L+VVP ST+ +W REF + + V
Sbjct: 31 SVILADEMGLGKTIQVISFLSYLFNVHQLYGPFLIVVPLSTMTSWQREFEAWDSKMNVVV 90
Query: 581 YYGSQQER 588
Y G R
Sbjct: 91 YIGDINSR 98
>Hs20532976 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 293
Score = 68.2 bits (165), Expect = 7e-11
Identities = 42/170 (24%), Positives = 83/170 (48%), Gaps = 2/170 (1%)
Query: 873 KVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLI 932
K +K + ++ K LVF+ +L + +++R+DG ++R L+
Sbjct: 70 KAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSSERIHLV 129
Query: 933 DRFYEDDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQ 992
++F +D V +LS +A G G+ A++V+ + ++P +QA DRAHR+GQ V
Sbjct: 130 NQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHIKQAEDRAHRIGQCSSVN 189
Query: 993 VTTLISRDTIEEKILHLAKNKLAL--DTHISQEDKKNEEALENKVTDLLE 1040
+ LI+ T++ + + K + T +++K E + + D L+
Sbjct: 190 IHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKIQAEEGDKEKWDFLQ 239
>YLR247c [L] KOG0298 DEAD box-containing helicase-like transcription
factor/DNA repair protein
Length = 1556
Score = 67.0 bits (162), Expect = 1e-10
Identities = 81/329 (24%), Positives = 132/329 (39%), Gaps = 52/329 (15%)
Query: 524 ILADEMGLGKTCQVISFLAY----LKQTH------------HNGPHLVVVPSSTLENWLR 567
+LA+EMGLGKT +++S + LK + L++ P++ L+ WL
Sbjct: 388 VLAEEMGLGKTIEILSLILLNRRKLKDSEATFIDDENRTITKTKTTLIICPNAILKQWLE 447
Query: 568 EFNKFCPHLKVEPYYGSQQERAELRDILE--ENEGQYDVIVTTYNLAA------------ 613
E LK Y G + + + + E + QYD+IVT+YN+ A
Sbjct: 448 EIELHANSLKWYTYRGYNEIMKDCKTVDEAVQQLCQYDIIVTSYNIIATEVHHAEFNRSI 507
Query: 614 ------GTKYDVSF-LRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQ 666
KYD S L F ++ DE ML++S + ++ ++GTP+Q
Sbjct: 508 RSRRLKSPKYDYSSPLALMQFYRIILDEVQMLRSSSTYSAKCTSLLHRIHTWGVSGTPIQ 567
Query: 667 N--NLKELMSLLEFIMPNLFVSKKDDLATVFKQ-KTRTSDADKGYNPLLAEHAIER--AK 721
N N + +MS L+ + F + D + T+ ++ K R D N + + R K
Sbjct: 568 NIYNFRMIMSYLKL---HPFCDEVDFIRTLQEEIKLRNEAKDYTSNDFVCQLKGVRFSIK 624
Query: 722 TMMKPF-----ILRRKKDQVLK--HLPRKHNHILHCEMTELQKTLYQQEIKQVMEHRRKI 774
M F +R K V H+PR+HN I+ E ++ Y +E
Sbjct: 625 DCMNIFYRYDLCIRHSKANVASQIHIPRQHNFIIPLEFAPIEWDNYLNLWNNFLELSGYN 684
Query: 775 KEGVKMEKASRNVSKNLIMALRKASIHPL 803
+G + S + LR H L
Sbjct: 685 SDGSGSPRVSNAFLNEWLSRLRYICCHAL 713
Score = 60.5 bits (145), Expect = 1e-08
Identities = 44/155 (28%), Positives = 76/155 (48%), Gaps = 14/155 (9%)
Query: 891 KVLVFSLFTQVLDILEFVLSTLNIKFLR-LDGQTQVNDRQSLIDRFYEDDTIPVFLLSTK 949
+V+++S T+ L ++ VL +I+ L L V + I+ F ++ LL+ K
Sbjct: 1381 QVILYSQKTEYLKVIGKVLKLYHIEHLACLSNTANVGET---INNFKRQPSVTCLLLNVK 1437
Query: 950 AGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHL 1009
G G+NL+ A ++ + D N D+ QA R +R+GQ +E V + R+T+EE IL
Sbjct: 1438 TLGAGLNLINAKHIFLLDPILNNSDELQAMGRNNRIGQDEETFVWNFMIRNTVEENILRY 1497
Query: 1010 ----------AKNKLALDTHISQEDKKNEEALENK 1034
K+K +Q++ NEE+ + K
Sbjct: 1498 KCILEERKRKEKSKKGDKYDEAQDETDNEESDDAK 1532
>Hs17441908 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 215
Score = 65.5 bits (158), Expect = 4e-10
Identities = 52/149 (34%), Positives = 69/149 (45%), Gaps = 12/149 (8%)
Query: 529 MGLGKTCQVISFLAYLKQTHHNGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQER 588
MGLGKT Q I + K+ P L+VVPSS W E K+ P L E Q +
Sbjct: 1 MGLGKTIQAIGITYFYKE---EWPLLIVVPSSLRYPWTEEIEKWIPELSPEEI-NVIQNK 56
Query: 589 AELRDILEENEGQYDVIVTTYNL-AAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFN 647
++R + V V Y L A K + L N+NF VV+ DE H +K+ + R
Sbjct: 57 TDVRRMSTSK-----VTVLGYGLLTADAKTLIDALNNQNFKVVIVDESHYMKSRNATRSR 111
Query: 648 KLMKI--NAHFRLLLTGTPLQNNLKELMS 674
L+ I A +LLTGTP +E S
Sbjct: 112 ILLPIVQKARRAILLTGTPALGRPEETRS 140
>7295362 [L] KOG0298 DEAD box-containing helicase-like transcription
factor/DNA repair protein
Length = 1270
Score = 64.3 bits (155), Expect = 9e-10
Identities = 46/156 (29%), Positives = 75/156 (47%), Gaps = 13/156 (8%)
Query: 876 QLKSVLHKIIDI----QHEKVLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSL 931
++ SV+ ++ I + EK++VFS + +L + LS I+F +D ++
Sbjct: 1106 KISSVVELVLKIKGENEQEKIIVFSQWQAILIEIARALSLNGIQFRNKCTNKDFDDFKNP 1165
Query: 932 IDRFYEDDTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEV 991
+ + L+ G G+NL+ A +V + + NP D+RQA R HR GQ +
Sbjct: 1166 LSN------VTCLLMPLSKGSKGLNLIEATHVFLVEPILNPGDERQAIGRIHRFGQKRPT 1219
Query: 992 QVTTLISRDTIEEKILHL---AKNKLALDTHISQED 1024
+V I +TIEE IL L A + L TH E+
Sbjct: 1220 KVHRFIVNETIEENILSLITSADDTTTLSTHWDLEN 1255
>CE23294 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 540
Score = 61.2 bits (147), Expect = 8e-09
Identities = 115/544 (21%), Positives = 214/544 (39%), Gaps = 96/544 (17%)
Query: 493 PKLLSSDVELKDYQQTGINWL-HLLYQNDLSCILADEMGLGKTCQVISFL--------AY 543
P +D L +Q+ +W+ Q IL G GKT VI+ + +
Sbjct: 35 PNGFVADFRLMPHQEAARDWMIDREAQEPSGGILGLAHGQGKTAIVIALILDQKIKCASN 94
Query: 544 LKQTHHNGPHLVVVPSSTLENWLREFNKFCPHLKVEPYYGSQQERAELRDILEENEGQ-Y 602
K+ P L++VP + W EF + Y E +E R + +E Q Y
Sbjct: 95 DKKFEQKSPTLIIVPKRIIYQWYDEFKDRLEENALSVYLYYDDEFSEARKNISASELQKY 154
Query: 603 DVIVTTYNLA-------AGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAH 655
DV++TTY G K L+N + +V DE H +++S +++ + + +
Sbjct: 155 DVVLTTYRNVPVKEKDETGEKVSKQVLQNIKWTRIVLDEAHNIRDSNTKKSTAIATLASK 214
Query: 656 FRLLLTGTPLQNNLKELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEH 715
R +T P QN+ ++ +L+ F+ G P E+
Sbjct: 215 NRWCVTAAPFQNSEWDICNLILFL---------------------------GNKP-FGEN 246
Query: 716 AIERAKTMMKPFILRRKKDQVLKHLPRKHNHILHCEMTELQKTLYQQEIKQVME--HRRK 773
KT P L++ K+ ++ L R +N + + + + + +++ ++E H+R
Sbjct: 247 VKGPEKT---PENLKKLKESTME-LFRGNNLVFNSIINTGELSANEKKAYDIIEDAHKRF 302
Query: 774 IKEGVKMEKASRNVSKNLIMALRKASIHPLLFRHIYNDXXXXXXXXXXXXEPEYYENGNI 833
K+G ++ L+ L++ASIH F ++ + E E ++
Sbjct: 303 CKKGQSLK---------LLAMLQQASIH---FHNLAPEEPLKKAMDKFMDEEEKFKEEEK 350
Query: 834 EYIKEDMSYMT--------DFELHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKII 885
+ + ++ T FE K + + KF ++E+ S E LK+V
Sbjct: 351 SFNMAEKNFETACSDDEKQAFESAKTTFE-TAKEKFTKATEEYTFS--KETLKNVAKLAK 407
Query: 886 DIQHEKVLVFSLFTQVLDILE---FVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIP 942
+ Q K+ F ++ DI + T+NI ++ L+ + E T+
Sbjct: 408 NGQFPKI---GQFPEIFDIKHPNARITKTINI------------IQEVLMKK--EKVTVS 450
Query: 943 VFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTI 1002
V LS +AG INL A +VI+ +N +++A + Q V + + T
Sbjct: 451 VVFLSERAG--AINLHGATHVILLGMHWNLALEQEACSCVCNIAQKNIVTIHRIKVAGTN 508
Query: 1003 EEKI 1006
E+ +
Sbjct: 509 EDDV 512
>Hs22054523 [L] KOG0298 DEAD box-containing helicase-like transcription
factor/DNA repair protein
Length = 1669
Score = 60.8 bits (146), Expect = 1e-08
Identities = 35/111 (31%), Positives = 59/111 (52%), Gaps = 3/111 (2%)
Query: 901 VLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKAGGFGINLVCA 960
VLDI+ L+ N++F ++ ++V Q + F D I + LL G G+ ++ A
Sbjct: 1550 VLDIISKALTDNNMEFAQI---SRVKTFQENLSAFKRDPQINILLLPLHTGSNGLTIIEA 1606
Query: 961 NNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAK 1011
+V++ + NP + QA R HR+GQTK V + + TIEE++ + K
Sbjct: 1607 THVLLVEPILNPAHELQAIGRVHRIGQTKPTIVHRFLIKATIEERMQAMLK 1657
>At5g20420 [L] KOG0390 DNA repair protein SNF2 family
Length = 1261
Score = 60.5 bits (145), Expect = 1e-08
Identities = 43/126 (34%), Positives = 65/126 (51%), Gaps = 10/126 (7%)
Query: 887 IQHEKVLVFS-------LFTQVLDILEFVLSTLNIKFLRLDGQTQVNDRQSLIDRFYED- 938
++ EK+L+F +FT++ + + L L G ++ +R +ID+F E
Sbjct: 1076 VKREKILIFCHNIAPIRMFTELFE--NIFRWQRGREILTLTGDLELFERGRVIDKFEEPG 1133
Query: 939 DTIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLIS 998
+ V L S A GI+L A+ VI+ D +NP +QA RA R GQ K V V L+S
Sbjct: 1134 NPSRVLLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQQKVVYVYQLLS 1193
Query: 999 RDTIEE 1004
R T+EE
Sbjct: 1194 RGTLEE 1199
>At3g42670 [L] KOG0390 DNA repair protein SNF2 family
Length = 1256
Score = 59.7 bits (143), Expect = 2e-08
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 6/124 (4%)
Query: 887 IQHEKVLVF----SLFTQVLDILEFVLS-TLNIKFLRLDGQTQVNDRQSLIDRFYEDD-T 940
++ EK+L+F + L++ E V + L L G ++ +R +ID+F E
Sbjct: 1070 VKREKILIFCHNIAPIRLFLELFENVFRWKRGRELLTLTGDLELFERGRVIDKFEEPGGQ 1129
Query: 941 IPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVQVTTLISRD 1000
V L S A GI+L A+ VI+ D +NP +QA RA R GQ K V V L+SR
Sbjct: 1130 SRVLLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQQKVVYVYQLLSRG 1189
Query: 1001 TIEE 1004
T+EE
Sbjct: 1190 TLEE 1193
Score = 59.3 bits (142), Expect = 3e-08
Identities = 62/227 (27%), Positives = 99/227 (43%), Gaps = 39/227 (17%)
Query: 523 CILADEMGLGKTCQVISFLA-YLKQTHHNGPHLVVVPSSTLENWLREFNKFCPHLKVEPY 581
C+++ G GKT +I+FLA YLK P LV+ P +TL W +EF K+ + V
Sbjct: 708 CVVSHTPGAGKTFLIIAFLASYLKIFPGKRP-LVLAPKTTLYTWYKEFIKWEIPVPVHLL 766
Query: 582 YGSQ-------------------QERAELRDILEENE---GQYDVIVTTY---------- 609
+G + Q+ + D L++ + Q V+V Y
Sbjct: 767 HGRRTYCMSKEKTIQFEGIPKPSQDVMHVLDCLDKIQKWHAQPSVLVMGYTSFLTLMRED 826
Query: 610 NLAAGTKYDVSFLRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNL 669
+ A KY LR + ++V DEGH +++ S LMK++ R+LL+GT QNN
Sbjct: 827 SKFAHRKYMAKVLR-ESPGLLVLDEGHNPRSTKSRLRKALMKVDTDLRILLSGTLFQNNF 885
Query: 670 KELMSLLEFIMPNLFVSKKDDLATVFKQKTRTSDADKGYNPLLAEHA 716
E + L P ++ +K +T+ A++ LL A
Sbjct: 886 CEYFNTLCLARPKFV----HEVLVELDKKFQTNQAEQKAPHLLENRA 928
>At2g25020 [L] KOG0390 DNA repair protein SNF2 family
Length = 476
Score = 56.2 bits (134), Expect = 3e-07
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 13/180 (7%)
Query: 514 HLLYQNDLSCILADEMGLGKTCQVISFLAYLKQTHHNGPHLVVVPSSTLENWLREFNKFC 573
+L+ +N CI+A KT +ISF+ + H N L V+P L W +F +
Sbjct: 200 NLVVENSNGCIIAQTPLSEKTFLMISFIYGYLEKHPNSKPLFVLPKWVLNFWKTKFGELK 259
Query: 574 PH--LKVEPYYGSQQERAELRDILEE----------NEGQYDVIVTTYNLAAGTKYDVSF 621
+ + ++ Y R++ ++L Q+ I++ + A +
Sbjct: 260 VNDLVLLDFYSAKASTRSQQLEVLNRWIKTRSIIFLGAKQFSNIISDNSGAEASDSCRDI 319
Query: 622 LRNRNFDVVVYDEGHMLKNSMSERFNKLMKINAHFRLLLTGTPLQNNLKELMSLLEFIMP 681
L N VVV+D G +N M + +I ++LLTG+ QNN+KE+ ++L+ + P
Sbjct: 320 LLNIP-SVVVFDRGTDPRNEMMSFLKVVARIKTPHKVLLTGSLYQNNIKEVFNILDVVFP 378
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.314 0.131 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,643,268
Number of Sequences: 60738
Number of extensions: 2582477
Number of successful extensions: 11067
Number of sequences better than 1.0e-05: 160
Number of HSP's better than 0.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 10035
Number of HSP's gapped (non-prelim): 495
length of query: 1048
length of database: 30,389,216
effective HSP length: 117
effective length of query: 931
effective length of database: 23,282,870
effective search space: 21676351970
effective search space used: 21676351970
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)