ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI2065 suspect: Pn Y KOG2992 Nuclear structure Nucleolar GTPase/ATPase p130
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI2065 737054 738871 606
(606 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
SPBC1711.05 [Y] KOG2992 Nucleolar GTPase/ATPase p130 53 2e-06
At3g18610 [K] KOG4210 Nuclear localization sequence binding protein 52 3e-06
Hs10835055 [R] KOG0663 Protein kinase PITSLRE and related kinases 50 8e-06
CE24463 [B] KOG1911 Heterochromatin-associated protein HP1 and r... 50 8e-06
Hs4758172 [S] KOG1181 FOG: Low-complexity 50 1e-05
>SPBC1711.05 [Y] KOG2992 Nucleolar GTPase/ATPase p130
Length = 451
Score = 52.8 bits (125), Expect = 2e-06
Identities = 53/287 (18%), Positives = 108/287 (37%), Gaps = 10/287 (3%)
Query: 29 KLTKEVLEKIASDSDSVNFNANXXXXXXXXXXXXXVGTLEYDDNSTSGLSKVTSPEHPNS 88
K TKE LEK DS ++ G+ + +S+S S+ +S ++ +S
Sbjct: 70 KKTKESLEKSNDDSQKISKKGAPPEKAHSSSEASGSGSSSDESDSSSSESESSSEDNDSS 129
Query: 89 VSLSDIYISSDAETEKMDLEEDESRVKLSEMASNSIESNGNDKSK---QNDDNLSKTVKQ 145
S SD S +E +S + S S+S S+ + +S+ +++D+ S +
Sbjct: 130 SSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDS 189
Query: 146 EYINNGVGSYIQESAPKLATPSKDEGPIVQQDKPAETEPEPVPYEDDAVADTDHTTEPNK 205
E ++ S S+ + S EG + D + + +D +E +
Sbjct: 190 ESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSS 249
Query: 206 LALSQNQDEVSVPAEGGSQEETIANDEQEQHAPVVEEQANDNEIKSQEESEVSLKHNREE 265
+ +E S++ +++ + + ++ S E+S+ + + +
Sbjct: 250 EDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSSDSSDSESESSSEDSDSTSSSSDSD 309
Query: 266 EQQSLENGSEHVK-------SEQVFKKPKLPTESKSGHYEDEHETHE 305
S E+G+ + S Q ES S ED + H+
Sbjct: 310 SSSSSEDGNSNTDTTTSGEVSAQSSTNSTSSEESTSVKDEDSSKIHD 356
Score = 51.2 bits (121), Expect = 4e-06
Identities = 62/322 (19%), Positives = 129/322 (39%), Gaps = 36/322 (11%)
Query: 4 ERNKNNSVEAASEIDDHNTRSAPTTKLTKEVLE-----KIASDSDSVNFNANXXXXXXXX 58
+ + ++S E+ S +D+++ S+ + ++ E +SDS+S + +
Sbjct: 110 DESDSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSS 169
Query: 59 XXXXXVGTLEYDDNSTSGLSKVTSPEHPNSVSLSDIYISSDAETEKMDLEEDESRVKLSE 118
+ + D +S+S S+ S + S S SSD+E+E D S S
Sbjct: 170 SSESESSSEDNDSSSSSSDSESESSSEDSDSSSS----SSDSESESSSEGSDSSSSSSSS 225
Query: 119 MASNSIESNGNDKSKQNDDNLSKTVKQEYINNGVGSYIQESAPKLATPSKDEGPIVQQDK 178
+ +S S ND S + D+ S++ ++ ++ S + + + S + D
Sbjct: 226 ESESS--SEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDS 283
Query: 179 PAETEPEPVPYEDDAVADTDHTTEPNKLALSQNQDEVSVPAEGGSQEETIANDEQEQHAP 238
+++ + + D+D T+ S + D S +G S +T + E +
Sbjct: 284 SSDSSDSE---SESSSEDSDSTSS------SSDSDSSSSSEDGNSNTDTTTSGEVSAQSS 334
Query: 239 VVEEQANDN-EIKSQEESEV---SLKHNREEEQQSLENGSEHV----------KSEQVFK 284
+ ++ +K ++ S++ SLK E+++ S S S+ F
Sbjct: 335 TNSTSSEESTSVKDEDSSKIHDKSLKRKHEDDESSTSTKSSRTTKTPFTRVGDPSQWDFA 394
Query: 285 KPKLPTESKSGHYEDEHETHEN 306
P L S ++ED++ T N
Sbjct: 395 SPAL--RDNSFNFEDDYGTLAN 414
>At3g18610 [K] KOG4210 Nuclear localization sequence binding protein
Length = 636
Score = 51.6 bits (122), Expect = 3e-06
Identities = 70/325 (21%), Positives = 123/325 (37%), Gaps = 34/325 (10%)
Query: 3 PERNKNNSVEAASEIDDHNTRSAPTTKLTKEVLEKIASDSDSVNFNANXXXXXXXXXXXX 62
P++ +++S +A+ ++ T+ P+ KL E + DS S A
Sbjct: 59 PKKVESSSSDASDSDEEEKTKETPS-KLKDESSSEEEDDSSSDEEIAPAKKRPEPIKKAK 117
Query: 63 XVGTLEYDDNSTSGLSKVTSPEHPNSVSLSDIYISSDAETEKMDLEEDESRVKLSEMASN 122
V + DD+STS + P + + + SS + D E + + + +
Sbjct: 118 -VESSSSDDDSTSDEETAPVKKQPAVLEKAKVESSSSDDDSSSDEETVPVKKQPAVLEKA 176
Query: 123 SIESNGNDKSKQNDDNLSKTVKQEYI-----NNGVGSYIQESAPKLATPSKDEGPIVQQD 177
IES+ +D +D+ KQ + S S+ + TP+K E +V++D
Sbjct: 177 KIESSSSDDDSSSDEETVPMKKQTAVLEKAKAESSSSDDGSSSDEEPTPAKKEPIVVKKD 236
Query: 178 KPAET---EPEPVPYEDDAVADTDHTTEPNKLALSQNQDEVSVPA--------------E 220
E+ E PV + D E + + D+ PA +
Sbjct: 237 SSDESSSDEETPVVKKKPTTVVKDAKAESSSSEEESSSDDEPTPAKKPTVVKNAKPAAKD 296
Query: 221 GGSQEETIANDEQEQHAP-----VVEEQANDNEIKSQEESEVSLKHNREEEQ---QSLEN 272
S EE +E + P V + + E S E S+ S K ++E+ + ++
Sbjct: 297 SSSSEEDSDEEESDDEKPPTKKAKVSSKTSKQESSSDESSDESDKEESKDEKVTPKKKDS 356
Query: 273 GSEHVKSEQV--FKKPKLPTESKSG 295
E V +EQ K+PK PT G
Sbjct: 357 DVEMVDAEQKSNAKQPKTPTNQTQG 381
>Hs10835055 [R] KOG0663 Protein kinase PITSLRE and related kinases
Length = 795
Score = 50.4 bits (119), Expect = 8e-06
Identities = 44/218 (20%), Positives = 94/218 (42%), Gaps = 20/218 (9%)
Query: 101 ETEKMDLEEDESRVKLSEMASNSIESNGNDKSKQNDDNLSKTVKQEYINNGVGSYIQESA 160
E E+ E+ + + + E + E ++++ +T++++Y + S+ S
Sbjct: 176 ERERKMREQQKEQREQKERERRAEERRKEREARREVSAHHRTMREDYSDKVKASHWSRSP 235
Query: 161 PKLATPSKDEGPIVQQDKPAETEP----EPVPYEDDAVADTDHTTEPNKLALSQNQ---- 212
P+ P ++ + KP E P +P +++ + + D ++ ++ S+ +
Sbjct: 236 PR---PPRERFELGDGRKPGEARPARAQKPAQLKEEKMEERDLLSDLQDISDSERKTSSA 292
Query: 213 DEVSVPAEGGSQEETIANDEQEQHAPVVEEQANDNEIKSQEESEVSLKHNREEEQQSLEN 272
+ S + GS+EE +E+E+ EE + E + +EE E ++ E +QS E
Sbjct: 293 ESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETG-SNSEEASEQSAEE 351
Query: 273 GSEHVKSEQVFKK--------PKLPTESKSGHYEDEHE 302
SE SE ++ P+ + SG E+ E
Sbjct: 352 VSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEE 389
>CE24463 [B] KOG1911 Heterochromatin-associated protein HP1 and related
CHROMO domain proteins
Length = 679
Score = 50.4 bits (119), Expect = 8e-06
Identities = 68/334 (20%), Positives = 137/334 (40%), Gaps = 53/334 (15%)
Query: 7 KNNSVEAASEIDDHNTRSAPTTKLTKEVLEKIASDSDS-VNFNANXXXXXXXXXXXXXVG 65
K S E++ + ++ + ++K+ K ++ +SD + V +
Sbjct: 363 KEESEESSGDEEEEVVKKKKSSKINKRKAKESSSDEEEEVEESPKKKTKSPRKSSKKSAA 422
Query: 66 TLEYDDNST----------SGLSKVTSPEHPNSVSLSDIYISSDAETEKMDLEEDESRVK 115
E ++ S+ S KV SP+ + + + ++ E+ + E +ES +K
Sbjct: 423 KEESEEESSDNEEEEEVDYSPKKKVKSPKKSSKKPAAKVESEEPSDNEEEEEEVEESPIK 482
Query: 116 L----------SEMASNSIESNGNDKSKQNDDNLSKTVKQEYINNGVGSYIQESAPKLA- 164
S S ES+GN++ ++ +++ K K ++ + ++ES +
Sbjct: 483 KDKTPRKYSRKSAAKVESTESSGNEEEEEVEESPKKKGKTPRKSSKKSAAVEESDNEEED 542
Query: 165 ---TPSKDEGPIVQQDKPAETEPEPVPYEDDAVADTDHTTEPNKLALSQNQDEVSVPAEG 221
+P K P K A E E D+ V + + + + N L ++ + PA
Sbjct: 543 VEESPKKRTSPRKSSKKRAAKE-ESEESSDNEVEEVEDSPKKNDKTLRKSPRK---PAAK 598
Query: 222 GSQEETIANDEQEQHAPVVEE---------QANDNEIKSQEESEVSLKHNREEEQQSLEN 272
EE+ N+E+E+ VEE + + + ++EESE S + EEE+Q+ E
Sbjct: 599 VESEESFGNEEEEE----VEESPKKKGKTPRKSSKKSAAKEESEES--SDDEEEEQAEET 652
Query: 273 GSEHVKSEQVFKKPKLPTESKSGHYEDEHETHEN 306
H +S PT+SK+ ++ + E+
Sbjct: 653 NGSHTES---------PTKSKTDESDNSTSSDED 677
>Hs4758172 [S] KOG1181 FOG: Low-complexity
Length = 513
Score = 50.1 bits (118), Expect = 1e-05
Identities = 58/232 (25%), Positives = 97/232 (41%), Gaps = 34/232 (14%)
Query: 68 EYDDNSTSGLSKVTSPEHPNSVSLSDIYISSDAETEKMDLEEDESRVKLSEMASNSIESN 127
E DDN+T K S E+ NS D +S K D +ED S+ LS+ S +++
Sbjct: 281 ELDDNNTMEEVKSDSTENSNS---RDTGLSQPRRDSKGDSQED-SKENLSQEESQNVDGP 336
Query: 128 GNDKSKQNDDNLSKTVKQEYINNGVGSYIQESAPKLATPSKDEGPIVQQDKPAETEPEPV 187
++ S++ NLS QE++ S+ + +V + + +P
Sbjct: 337 SSESSQEA--NLSS---------------QENS------SESQEEVVSESRGDNPDPTTS 373
Query: 188 PYEDDAVADTDHTTEPNKLALSQNQDEVSVPAEGGSQEETIANDEQEQHAPVVEEQANDN 247
ED D+D + E + LS ++ E E++ E+ +P E ++
Sbjct: 374 YVEDQE--DSDSSEEDSSHTLSHSKSESREEQADSESSESLNFSEESPESPEDENSSSQE 431
Query: 248 EIKSQEESEVSLKHNREEEQQSLENGSEHVKSEQVFKKPKLPTESKSGHYED 299
++S S S + EE S E+ S+ S + K+ TESKS ED
Sbjct: 432 GLQSHSSSAES----QSEESHSEEDDSDSQDSSR-SKEDSNSTESKSSSEED 478
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.306 0.126 0.343
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,480,740
Number of Sequences: 60738
Number of extensions: 1579636
Number of successful extensions: 8843
Number of sequences better than 1.0e-05: 5
Number of HSP's better than 0.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 8781
Number of HSP's gapped (non-prelim): 28
length of query: 606
length of database: 30,389,216
effective HSP length: 112
effective length of query: 494
effective length of database: 23,586,560
effective search space: 11651760640
effective search space used: 11651760640
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)