ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI2158 good J KOG0397 Translation, ribosomal structure and biogenesis 60S ribosomal protein L11
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI2158 772179 772700 174
(174 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YPR102c [J] KOG0397 60S ribosomal protein L11 325 2e-89
YGR085c [J] KOG0397 60S ribosomal protein L11 323 6e-89
SPBC17G9.10 [J] KOG0397 60S ribosomal protein L11 286 1e-77
SPAC26A3.07c [J] KOG0397 60S ribosomal protein L11 286 1e-77
CE13968 [J] KOG0397 60S ribosomal protein L11 267 6e-72
CE07033 [J] KOG0397 60S ribosomal protein L11 262 2e-70
7302476 [J] KOG0397 60S ribosomal protein L11 258 4e-69
At4g18730 [J] KOG0397 60S ribosomal protein L11 257 6e-69
At3g58700 [J] KOG0397 60S ribosomal protein L11 257 6e-69
Hs15431290 [J] KOG0397 60S ribosomal protein L11 255 2e-68
At2g42740 [J] KOG0397 60S ribosomal protein L11 242 2e-64
ECU02g0610 [J] KOG0397 60S ribosomal protein L11 203 8e-53
Hs17442243 [J] KOG0397 60S ribosomal protein L11 190 1e-48
Hs20537413 [J] KOG0397 60S ribosomal protein L11 73 2e-13
At4g01310 [J] KOG0398 Mitochondrial/chloroplast ribosomal protei... 57 2e-08
>YPR102c [J] KOG0397 60S ribosomal protein L11
Length = 174
Score = 325 bits (833), Expect = 2e-89
Identities = 158/174 (90%), Positives = 169/174 (96%)
Query: 1 MSAKAQNPMRELKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIR 60
MSAKAQNPMR+LKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIR
Sbjct: 1 MSAKAQNPMRDLKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIR 60
Query: 61 RNEKIAVHVTVRGPKAEEILERGLKVKEYQLRNRNFSATGNFGFGIQEHIDLGIKYDPGI 120
RNEKIAVHVTVRGPKAEEILERGLKVKEYQLR+RNFSATGNFGFGI EHIDLGIKYDP I
Sbjct: 61 RNEKIAVHVTVRGPKAEEILERGLKVKEYQLRDRNFSATGNFGFGIDEHIDLGIKYDPSI 120
Query: 121 GIYGMDFYIVMGRPGARVTRRKRCQSKIGNSHKTSKEDTIAWFKQRYDAEVLDK 174
GI+GMDFY+VM RPGARVTRRKRC+ +GNSHKT+KEDT++WFKQ+YDA+VLDK
Sbjct: 121 GIFGMDFYVVMNRPGARVTRRKRCKGTVGNSHKTTKEDTVSWFKQKYDADVLDK 174
>YGR085c [J] KOG0397 60S ribosomal protein L11
Length = 174
Score = 323 bits (829), Expect = 6e-89
Identities = 157/174 (90%), Positives = 168/174 (96%)
Query: 1 MSAKAQNPMRELKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIR 60
MS KAQNPMR+LKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIR
Sbjct: 1 MSTKAQNPMRDLKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIR 60
Query: 61 RNEKIAVHVTVRGPKAEEILERGLKVKEYQLRNRNFSATGNFGFGIQEHIDLGIKYDPGI 120
RNEKIAVHVTVRGPKAEEILERGLKVKEYQLR+RNFSATGNFGFGI EHIDLGIKYDP I
Sbjct: 61 RNEKIAVHVTVRGPKAEEILERGLKVKEYQLRDRNFSATGNFGFGIDEHIDLGIKYDPSI 120
Query: 121 GIYGMDFYIVMGRPGARVTRRKRCQSKIGNSHKTSKEDTIAWFKQRYDAEVLDK 174
GI+GMDFY+VM RPGARVTRRKRC+ +GNSHKT+KEDT++WFKQ+YDA+VLDK
Sbjct: 121 GIFGMDFYVVMNRPGARVTRRKRCKGTVGNSHKTTKEDTVSWFKQKYDADVLDK 174
>SPBC17G9.10 [J] KOG0397 60S ribosomal protein L11
Length = 174
Score = 286 bits (731), Expect = 1e-77
Identities = 140/174 (80%), Positives = 155/174 (88%)
Query: 1 MSAKAQNPMRELKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIR 60
M+ KAQNPM+EL+I KLVLNIS+GESGDRLTRA+KVLEQLSGQTPV SKARYT+R FGIR
Sbjct: 1 MAEKAQNPMKELRISKLVLNISLGESGDRLTRAAKVLEQLSGQTPVFSKARYTIRRFGIR 60
Query: 61 RNEKIAVHVTVRGPKAEEILERGLKVKEYQLRNRNFSATGNFGFGIQEHIDLGIKYDPGI 120
RNEKIA HVTVRGPKAEEILERGLKVKEY+L+ RNFSATGNFGFGIQEHIDLGIKYDP I
Sbjct: 61 RNEKIACHVTVRGPKAEEILERGLKVKEYELKKRNFSATGNFGFGIQEHIDLGIKYDPSI 120
Query: 121 GIYGMDFYIVMGRPGARVTRRKRCQSKIGNSHKTSKEDTIAWFKQRYDAEVLDK 174
GIYGMDFY+VM RPG RV RRK + ++G +HK + EDTI WFKQ+YDA VL K
Sbjct: 121 GIYGMDFYVVMDRPGMRVARRKAQRGRVGYTHKINAEDTINWFKQKYDAVVLGK 174
>SPAC26A3.07c [J] KOG0397 60S ribosomal protein L11
Length = 174
Score = 286 bits (731), Expect = 1e-77
Identities = 140/174 (80%), Positives = 155/174 (88%)
Query: 1 MSAKAQNPMRELKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIR 60
M+ KAQNPM+EL+I KLVLNIS+GESGDRLTRA+KVLEQLSGQTPV SKARYT+R FGIR
Sbjct: 1 MAEKAQNPMKELRISKLVLNISLGESGDRLTRAAKVLEQLSGQTPVFSKARYTIRRFGIR 60
Query: 61 RNEKIAVHVTVRGPKAEEILERGLKVKEYQLRNRNFSATGNFGFGIQEHIDLGIKYDPGI 120
RNEKIA HVTVRGPKAEEILERGLKVKEY+L+ RNFSATGNFGFGIQEHIDLGIKYDP I
Sbjct: 61 RNEKIACHVTVRGPKAEEILERGLKVKEYELKKRNFSATGNFGFGIQEHIDLGIKYDPSI 120
Query: 121 GIYGMDFYIVMGRPGARVTRRKRCQSKIGNSHKTSKEDTIAWFKQRYDAEVLDK 174
GIYGMDFY+VM RPG RV RRK + ++G +HK + EDTI WFKQ+YDA VL K
Sbjct: 121 GIYGMDFYVVMDRPGMRVARRKAQRGRVGYTHKINAEDTINWFKQKYDAVVLGK 174
>CE13968 [J] KOG0397 60S ribosomal protein L11
Length = 196
Score = 267 bits (682), Expect = 6e-72
Identities = 129/169 (76%), Positives = 147/169 (86%)
Query: 4 KAQNPMRELKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNE 63
K +N MRELKI+KL LNI VGESGDRLTRA+KVLEQL+GQTPV SKARYTVRTFGIRRNE
Sbjct: 14 KGRNVMRELKIQKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRTFGIRRNE 73
Query: 64 KIAVHVTVRGPKAEEILERGLKVKEYQLRNRNFSATGNFGFGIQEHIDLGIKYDPGIGIY 123
KIAVH TVRGPKAEEILE+GLKVKEY+L NFS TGNFGFG+QEHIDLGIKYDPGIGIY
Sbjct: 74 KIAVHCTVRGPKAEEILEKGLKVKEYELFKENFSDTGNFGFGVQEHIDLGIKYDPGIGIY 133
Query: 124 GMDFYIVMGRPGARVTRRKRCQSKIGNSHKTSKEDTIAWFKQRYDAEVL 172
GMDFY+V+ R G RV++R+R +IG SH+ KE+TI WF+Q+YD +L
Sbjct: 134 GMDFYVVLNRNGVRVSKRRRAPGRIGPSHRVDKEETIKWFQQKYDGIIL 182
>CE07033 [J] KOG0397 60S ribosomal protein L11
Length = 196
Score = 262 bits (670), Expect = 2e-70
Identities = 125/169 (73%), Positives = 146/169 (85%)
Query: 4 KAQNPMRELKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNE 63
KA+N MRELKI+KL LNI VGESGDRLTRA+KVLEQL+GQTPV SKARYTVRTFGIRRNE
Sbjct: 14 KARNVMRELKIQKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRTFGIRRNE 73
Query: 64 KIAVHVTVRGPKAEEILERGLKVKEYQLRNRNFSATGNFGFGIQEHIDLGIKYDPGIGIY 123
KIAVH TVRGPKAEEILE+GLKVKEY+L NFS TGNFGFG+QEHIDLGIKYDP IGIY
Sbjct: 74 KIAVHCTVRGPKAEEILEKGLKVKEYELYKENFSDTGNFGFGVQEHIDLGIKYDPSIGIY 133
Query: 124 GMDFYIVMGRPGARVTRRKRCQSKIGNSHKTSKEDTIAWFKQRYDAEVL 172
GMDFY+V+ R G R+ +R+R ++G SH+ +E++I WF+Q+YD +L
Sbjct: 134 GMDFYVVLDRAGRRIAKRRRAPGRVGPSHRVEREESIKWFQQKYDGIIL 182
>7302476 [J] KOG0397 60S ribosomal protein L11
Length = 184
Score = 258 bits (658), Expect = 4e-69
Identities = 124/169 (73%), Positives = 143/169 (84%)
Query: 5 AQNPMRELKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNEK 64
A+NPMR+L I KL LNI VGESGDRLTRA+KVLEQL+GQ PV SKARYTVR+FGIRRNEK
Sbjct: 13 AKNPMRDLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEK 72
Query: 65 IAVHVTVRGPKAEEILERGLKVKEYQLRNRNFSATGNFGFGIQEHIDLGIKYDPGIGIYG 124
IAVH TVRG KAEEILERGLKV+EY+LR NFS+TGNFGFGIQEHIDLGIKYDP IGIYG
Sbjct: 73 IAVHCTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKYDPSIGIYG 132
Query: 125 MDFYIVMGRPGARVTRRKRCQSKIGNSHKTSKEDTIAWFKQRYDAEVLD 173
+DFY+V+GRPG V RKR +G H+ +KED + WF+Q+YD +L+
Sbjct: 133 LDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDGIILN 181
>At4g18730 [J] KOG0397 60S ribosomal protein L11
Length = 184
Score = 257 bits (656), Expect = 6e-69
Identities = 122/171 (71%), Positives = 147/171 (85%)
Query: 4 KAQNPMRELKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNE 63
K NPMR++K++KLVLNISVGESGDRLTRASKVLEQLSGQTPV SKARYTVR+FGIRRNE
Sbjct: 8 KLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNE 67
Query: 64 KIAVHVTVRGPKAEEILERGLKVKEYQLRNRNFSATGNFGFGIQEHIDLGIKYDPGIGIY 123
KIA +VTVRG KA ++LE GLKVKEY+L RNFS TG FGFGIQEHIDLGIKYDP GIY
Sbjct: 68 KIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIY 127
Query: 124 GMDFYIVMGRPGARVTRRKRCQSKIGNSHKTSKEDTIAWFKQRYDAEVLDK 174
GMDFY+V+ RPG RV RR+RC++++G H+ +K+D + WF+ +Y+ +L+K
Sbjct: 128 GMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNK 178
>At3g58700 [J] KOG0397 60S ribosomal protein L11
Length = 182
Score = 257 bits (656), Expect = 6e-69
Identities = 122/171 (71%), Positives = 147/171 (85%)
Query: 4 KAQNPMRELKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNE 63
K NPMR++K++KLVLNISVGESGDRLTRASKVLEQLSGQTPV SKARYTVR+FGIRRNE
Sbjct: 6 KLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNE 65
Query: 64 KIAVHVTVRGPKAEEILERGLKVKEYQLRNRNFSATGNFGFGIQEHIDLGIKYDPGIGIY 123
KIA +VTVRG KA ++LE GLKVKEY+L RNFS TG FGFGIQEHIDLGIKYDP GIY
Sbjct: 66 KIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIY 125
Query: 124 GMDFYIVMGRPGARVTRRKRCQSKIGNSHKTSKEDTIAWFKQRYDAEVLDK 174
GMDFY+V+ RPG RV RR+RC++++G H+ +K+D + WF+ +Y+ +L+K
Sbjct: 126 GMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNK 176
>Hs15431290 [J] KOG0397 60S ribosomal protein L11
Length = 178
Score = 255 bits (651), Expect = 2e-68
Identities = 123/167 (73%), Positives = 142/167 (84%)
Query: 6 QNPMRELKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNEKI 65
+NPMREL+I KL LNI VGESGDRLTRA+KVLEQL+GQTPV SKARYTVR+FGIRRNEKI
Sbjct: 9 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 68
Query: 66 AVHVTVRGPKAEEILERGLKVKEYQLRNRNFSATGNFGFGIQEHIDLGIKYDPGIGIYGM 125
AVH TVRG KAEEILE+GLKV+EY+LR NFS TGNFGFGIQEHIDLGIKYDP IGIYG+
Sbjct: 69 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGL 128
Query: 126 DFYIVMGRPGARVTRRKRCQSKIGNSHKTSKEDTIAWFKQRYDAEVL 172
DFY+V+GRPG + +KR IG H+ SKE+ + WF+Q+YD +L
Sbjct: 129 DFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 175
>At2g42740 [J] KOG0397 60S ribosomal protein L11
Length = 182
Score = 242 bits (618), Expect = 2e-64
Identities = 119/176 (67%), Positives = 144/176 (81%), Gaps = 10/176 (5%)
Query: 9 MRELKIEKLVLNISVGESGDRLTRASKV----------LEQLSGQTPVQSKARYTVRTFG 58
MR++K++KLVLNISVGESGDRLTRASKV LEQLSGQTPV SKARYTVR+FG
Sbjct: 1 MRDIKVQKLVLNISVGESGDRLTRASKVPPVFYPFSVVLEQLSGQTPVFSKARYTVRSFG 60
Query: 59 IRRNEKIAVHVTVRGPKAEEILERGLKVKEYQLRNRNFSATGNFGFGIQEHIDLGIKYDP 118
IRRNEKIA +VTVRG KA ++LE GLKVKEY+L RNFS TG FGFGIQEHIDLGIKYDP
Sbjct: 61 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
Query: 119 GIGIYGMDFYIVMGRPGARVTRRKRCQSKIGNSHKTSKEDTIAWFKQRYDAEVLDK 174
GIYGMDFY+V+ RPG RV RR+RC++++G H+ +K+D + WF+ +Y+ +L+K
Sbjct: 121 STGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNK 176
>ECU02g0610 [J] KOG0397 60S ribosomal protein L11
Length = 165
Score = 203 bits (517), Expect = 8e-53
Identities = 95/165 (57%), Positives = 126/165 (75%)
Query: 9 MRELKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNEKIAVH 68
MRE+ I+KL ++I ESG +L RA+KVLEQL+GQ PV SKAR T+R FGIRRNEKIAVH
Sbjct: 1 MREISIKKLSIHICARESGAKLDRAAKVLEQLTGQKPVTSKARMTIRNFGIRRNEKIAVH 60
Query: 69 VTVRGPKAEEILERGLKVKEYQLRNRNFSATGNFGFGIQEHIDLGIKYDPGIGIYGMDFY 128
V V G KA E+L L+VKEY+L+ FS G FGFGI+EHIDLG+KYDP IGI+GMDF+
Sbjct: 61 VNVSGKKAYELLNTALRVKEYELKESCFSNNGCFGFGIEEHIDLGLKYDPNIGIFGMDFF 120
Query: 129 IVMGRPGARVTRRKRCQSKIGNSHKTSKEDTIAWFKQRYDAEVLD 173
+++ RPG RV++RKRC+S++GN + ED WF + ++ +++
Sbjct: 121 VILARPGDRVSKRKRCKSRVGNKQRVYAEDAKKWFVENFEGVLVE 165
>Hs17442243 [J] KOG0397 60S ribosomal protein L11
Length = 171
Score = 190 bits (482), Expect = 1e-48
Identities = 98/167 (58%), Positives = 123/167 (72%), Gaps = 6/167 (3%)
Query: 6 QNPMRELKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNEKI 65
+NPM++L I KL LNI V ESGDRLTRA+K LEQL+GQ T+R+ G++RNEKI
Sbjct: 8 ENPMQKLHICKLCLNICVEESGDRLTRAAKALEQLTGQK------LDTIRSSGMQRNEKI 61
Query: 66 AVHVTVRGPKAEEILERGLKVKEYQLRNRNFSATGNFGFGIQEHIDLGIKYDPGIGIYGM 125
AVH TV+G KAEEILE+ LKV++Y+LR NFS T NFGFGIQEHIDLGI YDP IGIYG+
Sbjct: 62 AVHCTVQGSKAEEILEKDLKVQKYELRKNNFSDTRNFGFGIQEHIDLGIIYDPSIGIYGL 121
Query: 126 DFYIVMGRPGARVTRRKRCQSKIGNSHKTSKEDTIAWFKQRYDAEVL 172
DF +V+GRPG +T +K G H+ SKE+ + F+ +YD +L
Sbjct: 122 DFSVVLGRPGFSITDKKHRTGCTGAKHRLSKEEMMRCFQHKYDGIIL 168
>Hs20537413 [J] KOG0397 60S ribosomal protein L11
Length = 323
Score = 73.2 bits (178), Expect = 2e-13
Identities = 36/58 (62%), Positives = 44/58 (75%), Gaps = 2/58 (3%)
Query: 76 AEEILERGLKVKEYQLRNR--NFSATGNFGFGIQEHIDLGIKYDPGIGIYGMDFYIVM 131
AE ILE+GLKV+EY+LR N S T NFGFGIQ+H D+GIKYD GIY +DF +V+
Sbjct: 25 AETILEKGLKVQEYELRKEKNNPSDTRNFGFGIQKHTDIGIKYDSSTGIYDLDFNVVL 82
>At4g01310 [J] KOG0398 Mitochondrial/chloroplast ribosomal protein L5/L7
Length = 262
Score = 56.6 bits (135), Expect = 2e-08
Identities = 34/127 (26%), Positives = 70/127 (54%), Gaps = 10/127 (7%)
Query: 13 KIEKLVLNISVGESGDR---LTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNEKIAVHV 69
K++K+V+N +G++ L A K + ++GQ P++++AR ++ TF IR ++ + + V
Sbjct: 85 KVQKIVVNCGIGDAAQNDKGLEAAMKDIALITGQKPIKTRARASIATFKIREDQPLGIAV 144
Query: 70 TVRGPKAEEILERGL-----KVKEYQ-LRNRNFSATGNFGFGIQEH-IDLGIKYDPGIGI 122
T+RG L+R + + +++Q + +F GN+ G+++ + I++D
Sbjct: 145 TLRGDVMYSFLDRLINLALPRTRDFQGVSPSSFDGNGNYSIGVKDQGVFPEIRFDAVGKT 204
Query: 123 YGMDFYI 129
GMD I
Sbjct: 205 RGMDVCI 211
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.318 0.136 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,850,500
Number of Sequences: 60738
Number of extensions: 385883
Number of successful extensions: 836
Number of sequences better than 1.0e-05: 15
Number of HSP's better than 0.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 819
Number of HSP's gapped (non-prelim): 15
length of query: 174
length of database: 30,389,216
effective HSP length: 99
effective length of query: 75
effective length of database: 24,376,154
effective search space: 1828211550
effective search space used: 1828211550
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)