ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI2300 good RK KOG2355 General function prediction only Predicted ABC-type transport, ATPase component/CCR4 associated factor
r_klactVI2300 good RK KOG2355 Transcription Predicted ABC-type transport, ATPase component/CCR4 associated factor
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI2300 822039 822857 273
(273 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YFL028c [RK] KOG2355 Predicted ABC-type transport ATPase compone... 237 1e-62
SPAC20G4.01 [RK] KOG2355 Predicted ABC-type transport ATPase com... 141 1e-33
At5g02270 [RK] KOG2355 Predicted ABC-type transport ATPase compo... 115 5e-26
At1g03900_2 [RK] KOG2355 Predicted ABC-type transport ATPase com... 104 2e-22
At5g44110 [RK] KOG2355 Predicted ABC-type transport ATPase compo... 97 2e-20
>YFL028c [RK] KOG2355 Predicted ABC-type transport ATPase component/CCR4
associated factor
Length = 289
Score = 237 bits (605), Expect = 1e-62
Identities = 127/285 (44%), Positives = 172/285 (59%), Gaps = 15/285 (5%)
Query: 4 NDLAVEVHDLTYAFPGSKRSAIHDLSLSVEWNKKVLVVGNNXXXXXXXXXXXXXXXXXXX 63
+ A+EV +LTY F S ++ D++L + WN + LVVG N
Sbjct: 3 SQFAIEVRNLTYKFKESSDPSVVDINLQIPWNTRSLVVGANGAGKSTLLKLLSGKHLCLD 62
Query: 64 XNIKVGNKNPFAPNN-----DQESVI------LTTYLGTEWASMAIVHRDIGVLELLESI 112
I V +PF+P + D ESV TTYLGTEW M+I++RDIGVLELL+SI
Sbjct: 63 GKILVNGLDPFSPLSMNQVDDDESVEDSTNYQTTTYLGTEWCHMSIINRDIGVLELLKSI 122
Query: 113 GLSHYRARGEELVRILEVDINWRMFKLSDGQKRRVQLCMGLLKPFKXXXXXXXXXXXXXX 172
G H+R RGE LVRIL++D+ WRM +LSDGQKRRVQL MGLLKP++
Sbjct: 123 GFDHFRERGERLVRILDIDVRWRMHRLSDGQKRRVQLAMGLLKPWRVLLLDEVTVDLDVI 182
Query: 173 ARDRLFQFLDRETRDRQCSVVYATHIFDGLAPWADEIIHLQDGTITRTLDYQRDIHFTKE 232
AR RL +FL ET R+CSVVYATHIFDGLA W +++ H++ G I LDYQ+D+ F++
Sbjct: 183 ARARLLEFLKWETETRRCSVVYATHIFDGLAKWPNQVYHMKSGKIVDNLDYQKDVEFSEV 242
Query: 233 IEGV---QERKDNGRHTVILGYMKSLYPLALHWLTRD-QVEDQKL 273
+ Q +N + V++ + SL+PLAL WL RD Q+ D+++
Sbjct: 243 VNAKVNGQVAFENDNNKVVISKVNSLHPLALEWLKRDNQIPDKEI 287
>SPAC20G4.01 [RK] KOG2355 Predicted ABC-type transport ATPase component/CCR4
associated factor
Length = 255
Score = 141 bits (355), Expect = 1e-33
Identities = 74/187 (39%), Positives = 101/187 (53%), Gaps = 8/187 (4%)
Query: 37 KVLVVGNNXXXXXXXXXXXXXXXXXXXXNIKVGNKNPFAPNNDQESVILTTYLGTEWASM 96
+ L+VG N +I VG K+PF +ES YLGTEW +
Sbjct: 7 RTLLVGANGAGKSTLLKLLSGKSLAKAGHISVGGKDPF-----RESSSAFVYLGTEWVNN 61
Query: 97 AIVHRDIGVLELLESIGLSHYRARGEELVRILEVDINWRMFKLSDGQKRRVQLCMGLLKP 156
++HRD+ V L+ S+G + R + L+ IL++D+ WRM +SDG++RRVQLCMGLL+P
Sbjct: 62 PVIHRDMSVARLIASVGGDKFAERRDFLISILDIDLRWRMHAVSDGERRRVQLCMGLLRP 121
Query: 157 FKXXXXXXXXXXXXXXARDRLFQFLDRETRDRQCSVVYATHIFDGLAPWADEIIHLQDGT 216
F+ AR L FL ET R ++VYATHIFDGLA W ++HL G
Sbjct: 122 FEVLLLDEVTVDLDVLARADLLNFLQEETEVRNATIVYATHIFDGLAEWPTHLVHLSLG- 180
Query: 217 ITRTLDY 223
R +DY
Sbjct: 181 --RIVDY 185
>At5g02270 [RK] KOG2355 Predicted ABC-type transport ATPase component/CCR4
associated factor
Length = 328
Score = 115 bits (289), Expect = 5e-26
Identities = 71/233 (30%), Positives = 117/233 (49%), Gaps = 18/233 (7%)
Query: 8 VEVHDLTYAFPG-------SKRSAIHDLSLSVEWNKKVLVVGNNXXXXXXXXXXXXXXXX 60
VE+ L + +PG + I D S+++ + + L+VG+N
Sbjct: 14 VEISGLRFTYPGIDGHPPPGSKPLIEDFSITLNSSDRCLLVGSNGAGKTTILKILGGKHM 73
Query: 61 XXXXNIKVGNKNPFAPNNDQESVILTTYLGTEW------ASMAI-VHRDIGVLELLESI- 112
++V ++ F S L YLG EW A + + DI +++ +
Sbjct: 74 VEPHMVRVLGRSAFHDTGLTSSGDLC-YLGGEWRRDVAFAGFEVPIQMDISAEKMIFGVA 132
Query: 113 GLSHYRARGEELVRILEVDINWRMFKLSDGQKRRVQLCMGLLKPFKXXXXXXXXXXXXXX 172
G+ R +EL+++L++DI+WR+ K+SDGQ+RRVQ+CMGLLKPFK
Sbjct: 133 GIDPQRR--DELIKVLDIDISWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVL 190
Query: 173 ARDRLFQFLDRETRDRQCSVVYATHIFDGLAPWADEIIHLQDGTITRTLDYQR 225
AR L +FL +E +R +++YATHIFDGL W I+++ +G + L ++
Sbjct: 191 ARADLLKFLRKECEERGATIIYATHIFDGLEDWPTHIVYVANGKLQLALPMEK 243
>At1g03900_2 [RK] KOG2355 Predicted ABC-type transport ATPase component/CCR4
associated factor
Length = 290
Score = 104 bits (259), Expect = 2e-22
Identities = 71/229 (31%), Positives = 106/229 (46%), Gaps = 18/229 (7%)
Query: 2 ASNDLAVEVHDLTYAFPGSKRSAIHDLSLSVEWNKKVLVVGNNXXXXXXXXXXXXXXXXX 61
AS D A+ V + +A+ + D +L + + L+VG N
Sbjct: 8 ASGDDAIRVSGMQFAYE-VEDPIFFDFNLDLPAGSRCLLVGANGSGKTTLLKILAGKHMV 66
Query: 62 XXXNI-KVGNKNPFAPNNDQESVIL--TTYLGTEWASMAIVHRDIGVLELLESIGLSHY- 117
N+ +V +++ F +D + V +YLG W+ G + L H
Sbjct: 67 GGKNVVQVLSRSAF---HDTQLVCSGDLSYLGGSWSKTV---GSAGEVPLQGDFSAEHMI 120
Query: 118 -------RARGEELVRILEVDINWRMFKLSDGQKRRVQLCMGLLKPFKXXXXXXXXXXXX 170
R E+L+ +L++++ WRM K+SDGQKRRVQ+CMGLL PFK
Sbjct: 121 FGVEGTDPVRREKLIDLLDINLQWRMHKVSDGQKRRVQICMGLLHPFKVLLLDEVTVDLD 180
Query: 171 XXARDRLFQFLDRETRDRQCSVVYATHIFDGLAPWADEIIHLQDGTITR 219
AR L +F E R ++VYATHIFDGL WA + ++QDG + R
Sbjct: 181 VVARMDLLEFFKEECDQRGATIVYATHIFDGLETWATHLAYIQDGELNR 229
>At5g44110 [RK] KOG2355 Predicted ABC-type transport ATPase component/CCR4
associated factor
Length = 282
Score = 97.4 bits (241), Expect = 2e-20
Identities = 67/224 (29%), Positives = 107/224 (46%), Gaps = 17/224 (7%)
Query: 27 DLSLSVEWNKKVLVVGNNXXXXXXXXXXXXXXXXXXXXNI-KVGNKNPFAPNNDQESVIL 85
D +L + + L+VG N N+ +V +++ F +D E V
Sbjct: 31 DFNLDLPAGSRCLLVGANGSGKTTLLKILAGKHMVGGKNVVQVLDRSAF---HDTELVCS 87
Query: 86 --TTYLGTEWASMA------IVHRDIGVLELLESI-GLSHYRARGEELVRILEVDINWRM 136
+YLG W+ A + D ++ + G+ +R E+L+ +L++++ WRM
Sbjct: 88 GDLSYLGGSWSKTAGSAGDIPLQGDFSAEHMIFGVEGIDPFRR--EKLIDLLDINLQWRM 145
Query: 137 FKLSDGQKRRVQLCMGLLKPFKXXXXXXXXXXXXXXARDRLFQFLDRETRDRQCSVVYAT 196
K+SDGQ+RRVQ+CMGLL PFK AR L +F E R ++VYAT
Sbjct: 146 HKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDVVARMDLLEFFKEECEQRGATIVYAT 205
Query: 197 HIFDGLAPWADEIIHLQDG--TITRTLDYQRDIHFTKEIEGVQE 238
HIFDGL WA + ++ G ++ LD +D+ + + V E
Sbjct: 206 HIFDGLETWASHLAYINGGELKLSAKLDEIKDLKTSPNLLSVVE 249
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.321 0.138 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,287,515
Number of Sequences: 60738
Number of extensions: 508291
Number of successful extensions: 1034
Number of sequences better than 1.0e-05: 5
Number of HSP's better than 0.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1026
Number of HSP's gapped (non-prelim): 5
length of query: 273
length of database: 30,389,216
effective HSP length: 105
effective length of query: 168
effective length of database: 24,011,726
effective search space: 4033969968
effective search space used: 4033969968
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)