ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI2377 good B KOG1342 Chromatin structure and dynamics Histone deacetylase complex, catalytic component RPD3
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI2377 848467 849822 452
(452 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YGL194c [B] KOG1342 Histone deacetylase complex catalytic compon... 735 0.0
SPAC3G9.07c [B] KOG1342 Histone deacetylase complex catalytic co... 502 e-142
Hs13128862 [B] KOG1342 Histone deacetylase complex catalytic com... 449 e-126
7296744 [B] KOG1342 Histone deacetylase complex catalytic compon... 442 e-124
Hs13128860 [B] KOG1342 Histone deacetylase complex catalytic com... 441 e-123
7292522 [B] KOG1342 Histone deacetylase complex catalytic compon... 441 e-123
YNL330c [B] KOG1342 Histone deacetylase complex catalytic compon... 434 e-121
Hs20551695 [B] KOG1342 Histone deacetylase complex catalytic com... 433 e-121
SPBC36.05c [B] KOG1342 Histone deacetylase complex catalytic com... 428 e-120
Hs4557641 [B] KOG1342 Histone deacetylase complex catalytic comp... 426 e-119
At4g38130 [B] KOG1342 Histone deacetylase complex catalytic comp... 426 e-119
At3g44680 [B] KOG1342 Histone deacetylase complex catalytic comp... 422 e-118
CE08952 [B] KOG1342 Histone deacetylase complex catalytic compon... 410 e-114
CE18116 [B] KOG1342 Histone deacetylase complex catalytic compon... 403 e-112
At5g63110 [B] KOG1342 Histone deacetylase complex catalytic comp... 401 e-112
ECU03g1370 [B] KOG1342 Histone deacetylase complex catalytic com... 388 e-107
CE01472 [B] KOG1342 Histone deacetylase complex catalytic compon... 387 e-107
ECU09g0670 [B] KOG1342 Histone deacetylase complex catalytic com... 327 3e-89
At5g35600 [B] KOG1342 Histone deacetylase complex catalytic comp... 327 3e-89
Hs8923769 [B] KOG1342 Histone deacetylase complex catalytic comp... 288 9e-78
YPR068c [B] KOG1342 Histone deacetylase complex catalytic compon... 163 6e-40
7293057 [B] KOG1343 Histone deacetylase complex catalytic compon... 133 6e-31
YNL021w [B] KOG1343 Histone deacetylase complex catalytic compon... 130 4e-30
SPBC800.03 [B] KOG1343 Histone deacetylase complex catalytic com... 116 8e-26
At3g18520 [B] KOG1343 Histone deacetylase complex catalytic comp... 115 1e-25
At1g08460 [B] KOG1343 Histone deacetylase complex catalytic comp... 111 3e-24
Hs5174481 [B] KOG1343 Histone deacetylase complex catalytic comp... 109 7e-24
CE08062 [B] KOG1343 Histone deacetylase complex catalytic compon... 108 1e-23
Hs13259524 [B] KOG1343 Histone deacetylase complex catalytic com... 108 2e-23
Hs13259522 [B] KOG1343 Histone deacetylase complex catalytic com... 108 2e-23
Hs4885531 [B] KOG1343 Histone deacetylase complex catalytic comp... 105 1e-22
7292853 [B] KOG1343 Histone deacetylase complex catalytic compon... 102 1e-21
At3g44490 [B] KOG1342 Histone deacetylase complex catalytic comp... 102 2e-21
Hs17158039 [B] KOG1343 Histone deacetylase complex catalytic com... 101 2e-21
Hs21237799 [B] KOG1343 Histone deacetylase complex catalytic com... 100 4e-21
CE25887 [B] KOG1343 Histone deacetylase complex catalytic compon... 95 2e-19
CE20772 [B] KOG1343 Histone deacetylase complex catalytic compon... 95 2e-19
Hs20070354 [B] KOG1343 Histone deacetylase complex catalytic com... 92 2e-18
Hs13128864 [B] KOG1343 Histone deacetylase complex catalytic com... 91 4e-18
At4g33470 [B] KOG1343 Histone deacetylase complex catalytic comp... 89 2e-17
CE24411 [B] KOG1343 Histone deacetylase complex catalytic compon... 87 4e-17
Hs13376228 [B] KOG1344 Predicted histone deacetylase 82 1e-15
7301219 [B] KOG1344 Predicted histone deacetylase 82 1e-15
At5g61060 [B] KOG1343 Histone deacetylase complex catalytic comp... 80 6e-15
At3g44660 [B] KOG1342 Histone deacetylase complex catalytic comp... 73 1e-12
CE20787 [B] KOG1343 Histone deacetylase complex catalytic compon... 71 3e-12
Hs17158041 [B] KOG1343 Histone deacetylase complex catalytic com... 69 1e-11
At5g26040 [B] KOG1344 Predicted histone deacetylase 62 1e-09
At5g61070 [B] KOG1343 Histone deacetylase complex catalytic comp... 61 3e-09
>YGL194c [B] KOG1342 Histone deacetylase complex catalytic component RPD3
Length = 452
Score = 735 bits (1898), Expect = 0.0
Identities = 341/414 (82%), Positives = 383/414 (92%), Gaps = 2/414 (0%)
Query: 3 SDTLKFDEKTEAEKPLFDCDFGTSYSPRVSYHFNSKVSQYHYGVKHPMKPFRLMLTDHLV 62
S T +D KT+ +PLF+ F ++YSPRVSYHFNSKVS YHYGVKHPMKPFRLMLTDHLV
Sbjct: 2 SGTFSYDVKTKENEPLFE--FNSAYSPRVSYHFNSKVSHYHYGVKHPMKPFRLMLTDHLV 59
Query: 63 SAYGLHKVMDLYETRSATKDELTKFHSEDYVNFLAKVTPDTLNKLPRGSLEKFNIGDDCP 122
S+YGLHK+MDLYETRSAT+DEL +FHSEDYVNFL+KV+P+ NKLPRG+LE FNIGDDCP
Sbjct: 60 SSYGLHKIMDLYETRSATRDELLQFHSEDYVNFLSKVSPENANKLPRGTLENFNIGDDCP 119
Query: 123 IFQGMFDYAALYAGASLDASRKLLNGQSEIAINWSGGLHHAKKNNPSGFCYVNDIVLAIV 182
IFQ ++DY LY GASLDA+RKL+N QS+IAINWSGGLHHAKKN+PSGFCYVNDIVL+I+
Sbjct: 120 IFQNLYDYTTLYTGASLDATRKLINNQSDIAINWSGGLHHAKKNSPSGFCYVNDIVLSIL 179
Query: 183 NLLRYHPRVLYIDIDLHHGDGVQEAFYTTDRVFTVSFHKYNGEFFPGTGDLDEIGCSRGK 242
NLLRYHPR+LYIDIDLHHGDGVQEAFYTTDRVFT+SFHKYNGEFFPGTGDL EIGC +GK
Sbjct: 180 NLLRYHPRILYIDIDLHHGDGVQEAFYTTDRVFTLSFHKYNGEFFPGTGDLTEIGCDKGK 239
Query: 243 HFALNVPLQDGIEDDSYINLFKSIIDPVITSFRPSVIIQQCGADSLGHDRLGCFNLNIKA 302
HFALNVPL+DGI+DDSYINLFKSI+DP+I +F+P++I+QQCGADSLGHDRLGCFNLNIKA
Sbjct: 240 HFALNVPLEDGIDDDSYINLFKSIVDPLIMTFKPTLIVQQCGADSLGHDRLGCFNLNIKA 299
Query: 303 HGECVRFVKSFGVPMLVVGGGGYTPRNVSRLWTYETGLLNGVLLQPKLPEGIPFRDWFGP 362
HGECV+FVKSFG+PMLVVGGGGYTPRNVSRLWTYETG+LN VLL +PE IPFRD FGP
Sbjct: 300 HGECVKFVKSFGLPMLVVGGGGYTPRNVSRLWTYETGILNDVLLPEDIPEDIPFRDSFGP 359
Query: 363 DYSLHPTLDDLYENKNSKKFLENIRIRCLENIKYLQGAPSVRMDAELIPTQDIT 416
DYSL+P LDDLYENKNSKK LE+IRIRCLENI+YLQGAPSVRMDAE IPTQDI+
Sbjct: 360 DYSLYPMLDDLYENKNSKKLLEDIRIRCLENIRYLQGAPSVRMDAECIPTQDIS 413
>SPAC3G9.07c [B] KOG1342 Histone deacetylase complex catalytic component RPD3
Length = 434
Score = 502 bits (1293), Expect = e-142
Identities = 237/388 (61%), Positives = 299/388 (76%), Gaps = 4/388 (1%)
Query: 30 RVSYHFNSKVSQYHYGVKHPMKPFRLMLTDHLVSAYGLHKVMDLYETRSATKDELTKFHS 89
RV+YH + +V YHYG KHPMKP R+ +T+HLV YGLH M ++ R AT E+++FH
Sbjct: 27 RVTYHLDEQVGNYHYGDKHPMKPHRITITNHLVMGYGLHNKMSVFSPRMATFGEMSEFHR 86
Query: 90 EDYVNFLAKVTPDTLNKLPRGSLEKFNIGDDCPIFQGMFDYAALYAGASLDASRKLLNGQ 149
EDY++FL +VTPD + ++FNIGDDCP+F G ++++ AGASLDASRKL+ GQ
Sbjct: 87 EDYLDFLKRVTPDNAEQFA-DKFQQFNIGDDCPVFDGTYEFSQRSAGASLDASRKLVQGQ 145
Query: 150 SEIAINWSGGLHHAKKNNPSGFCYVNDIVLAIVNLLRYHPRVLYIDIDLHHGDGVQEAFY 209
++IAINWSGGLHHAK+ SGFCYVNDIVLAI+N+LR+ PRVLYIDID+HHGDGVQ+AFY
Sbjct: 146 TDIAINWSGGLHHAKRGEASGFCYVNDIVLAILNMLRFFPRVLYIDIDIHHGDGVQQAFY 205
Query: 210 TTDRVFTVSFHKYNGEFFPGTGDLDEIGCSRGKHFALNVPLQDGIEDDSYINLFKSIIDP 269
+DRV TVSFHKYNG+FFP TG+ DE G GK+FALNVPL+DGI D+ Y +LFKSII+P
Sbjct: 206 ESDRVLTVSFHKYNGDFFPATGNFDENGVKGGKYFALNVPLEDGIGDEQYTSLFKSIIEP 265
Query: 270 VITSFRPSVIIQQCGADSLGHDRLGCFNLNIKAHGECVRFVKSFGVPMLVVGGGGYTPRN 329
I +F+PS I+ QCGADSLG+DRLG FNL+I AHGECVRF +SF +PMLVVGGGGYT RN
Sbjct: 266 TINTFQPSAIVLQCGADSLGYDRLGVFNLSIHAHGECVRFTRSFNIPMLVVGGGGYTLRN 325
Query: 330 VSRLWTYETGLLNGVLLQPKLPEGIPFRDWFGPDYSLHPTLDDLYENKNSKKFLENIRIR 389
V+R W YET + + +LP + ++F PDY+LHP L ENKN+ K LE++RIR
Sbjct: 326 VARAWCYETSICVNEQIPSELPRETLYYEFFAPDYTLHPRLTTKIENKNTPKALEDLRIR 385
Query: 390 CLENIKYLQGAPSVRMDAELIPTQDITG 417
LE ++YL GAPSV+M + IP D+TG
Sbjct: 386 ALEQLRYLGGAPSVQM--QQIP-PDLTG 410
>Hs13128862 [B] KOG1342 Histone deacetylase complex catalytic component RPD3
Length = 428
Score = 449 bits (1155), Expect = e-126
Identities = 208/375 (55%), Positives = 279/375 (73%), Gaps = 2/375 (0%)
Query: 31 VSYHFNSKVSQYHYGVKHPMKPFRLMLTDHLVSAYGLHKVMDLYETRSATKDELTKFHSE 90
V+Y ++ V +HYG HPMKP RL LT LV YGL+K M +++ A++ ++ +FHSE
Sbjct: 5 VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64
Query: 91 DYVNFLAKVTPDTLNKLPRGSLEKFNIGDDCPIFQGMFDYAALYAGASLDASRKLLNGQS 150
DY++FL +V+P + + SL FN+GDDCP+F G+F++ + Y GASL + +L N
Sbjct: 65 DYIDFLQRVSPTNMQGFTK-SLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKIC 123
Query: 151 EIAINWSGGLHHAKKNNPSGFCYVNDIVLAIVNLLRYHPRVLYIDIDLHHGDGVQEAFYT 210
+IAINW+GGLHHAKK SGFCYVNDIV+ I+ LL+YHPRVLYIDID+HHGDGVQEAFY
Sbjct: 124 DIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYL 183
Query: 211 TDRVFTVSFHKYNGEFFPGTGDLDEIGCSRGKHFALNVPLQDGIEDDSYINLFKSIIDPV 270
TDRV TVSFHKY FFPGTGD+ E+G G+++ LNVPL+DGI+D SY +LF+ +I+ V
Sbjct: 184 TDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQV 243
Query: 271 ITSFRPSVIIQQCGADSLGHDRLGCFNLNIKAHGECVRFVKSFGVPMLVVGGGGYTPRNV 330
+ ++P+ I+ QCGADSLG DRLGCFNL+I+ HGECV +VKSF +P+LV+GGGGYT RNV
Sbjct: 244 VDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNV 303
Query: 331 SRLWTYETGLLNGVLLQPKLPEGIPFRDWFGPDYSLHPTLDDLYENKNSKKFLENIRIRC 390
+R WTYET LL + +LP F ++F PD++LHP + EN+NS+++L+ IR
Sbjct: 304 ARCWTYETSLLVEEAISEELPYSEYF-EYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTI 362
Query: 391 LENIKYLQGAPSVRM 405
EN+K L APSV++
Sbjct: 363 FENLKMLNHAPSVQI 377
>7296744 [B] KOG1342 Histone deacetylase complex catalytic component RPD3
Length = 438
Score = 442 bits (1136), Expect = e-124
Identities = 208/379 (54%), Positives = 274/379 (71%), Gaps = 4/379 (1%)
Query: 30 RVSYHFNSKVSQYHYGVKHPMKPFRLMLTDHLVSAYGLHKVMDLYETRSATKDELTKFHS 89
RVSY +N+ V +HYG HPMKP RL +T LV YGLHK M +Y A+ ++ +FHS
Sbjct: 5 RVSYFYNADVGNFHYGAGHPMKPQRLAVTHSLVMNYGLHKKMKIYRPYKASAQDMLRFHS 64
Query: 90 EDYVNFLAKVTPDTL--NKLPRGS-LEKFNIGDDCPIFQGMFDYAALYAGASLDASRKLL 146
++Y+ +L +VTP + N + L F++G+DCP+F G+FD+ A+Y GASL+ ++KL
Sbjct: 65 DEYIAYLQQVTPQNIQCNSVAYTKYLAHFSVGEDCPVFDGLFDFCAMYTGASLEGAQKLN 124
Query: 147 NGQSEIAINWSGGLHHAKKNNPSGFCYVNDIVLAIVNLLRYHPRVLYIDIDLHHGDGVQE 206
+ S+I INWSGGLHHAKK SGFCYVNDIV+ I+ LL+YHPRVLYIDID+HHGDGVQE
Sbjct: 125 HNHSDICINWSGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDVHHGDGVQE 184
Query: 207 AFYTTDRVFTVSFHKYNGEFFPGTGDLDEIGCSRGKHFALNVPLQDGIEDDSYINLFKSI 266
AFY TDRV T SFHKY FFPGTGD+ EIG G+++++NVPL++GI+D SY +FK I
Sbjct: 185 AFYLTDRVMTASFHKYGNYFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDQSYFQVFKPI 244
Query: 267 IDPVITSFRPSVIIQQCGADSLGHDRLGCFNLNIKAHGECVRFVKSFGVPMLVVGGGGYT 326
I ++ +RP+ I+ QCGADSL DRLGCF+L+ K HGECV+FVK VP LVVGGGGYT
Sbjct: 245 ISAIMDFYRPTAIVLQCGADSLAGDRLGCFSLSTKGHGECVKFVKELNVPTLVVGGGGYT 304
Query: 327 PRNVSRLWTYETGLLNGVLLQPKLPEGIPFRDWFGPDYSLHPTLDDLYENKNSKKFLENI 386
RNV+R WT+ET LL ++ LP + D+F PD++LHP ++ +N NSK++LE I
Sbjct: 305 LRNVARCWTHETSLLVDQDIENDLP-ATEYYDFFAPDFTLHPEINSRQDNANSKQYLELI 363
Query: 387 RIRCLENIKYLQGAPSVRM 405
EN+K Q +PSV+M
Sbjct: 364 VKHVYENLKMCQHSPSVQM 382
>Hs13128860 [B] KOG1342 Histone deacetylase complex catalytic component RPD3
Length = 482
Score = 441 bits (1133), Expect = e-123
Identities = 201/381 (52%), Positives = 284/381 (73%), Gaps = 10/381 (2%)
Query: 30 RVSYHFNSKVSQYHYGVKHPMKPFRLMLTDHLVSAYGLHKVMDLYETRSATKDELTKFHS 89
+V Y+++ V Y+YG HPMKP R+ +T +L+ YGL++ M++Y A +E+TK+HS
Sbjct: 10 KVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHS 69
Query: 90 EDYVNFLAKVTPDTLNKLPRGSLEKFNIGDDCPIFQGMFDYAALYAGASLDASRKLLNGQ 149
+DY+ FL + PD +++ + +++FN+G+DCP+F G+F++ L G S+ ++ KL Q
Sbjct: 70 DDYIKFLRSIRPDNMSEYSK-QMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQ 128
Query: 150 SEIAINWSGGLHHAKKNNPSGFCYVNDIVLAIVNLLRYHPRVLYIDIDLHHGDGVQEAFY 209
++IA+NW+GGLHHAKK+ SGFCYVNDIVLAI+ LL+YH RVLYIDID+HHGDGV+EAFY
Sbjct: 129 TDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFY 188
Query: 210 TTDRVFTVSFHKYNGEFFPGTGDLDEIGCSRGKHFALNVPLQDGIEDDSYINLFKSIIDP 269
TTDRV TVSFHKY GE+FPGTGDL +IG +GK++A+N PL+DGI+D+SY +FK ++
Sbjct: 189 TTDRVMTVSFHKY-GEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSK 247
Query: 270 VITSFRPSVIIQQCGADSLGHDRLGCFNLNIKAHGECVRFVKSFGVPMLVVGGGGYTPRN 329
V+ F+PS ++ QCG+DSL DRLGCFNL IK H +CV FVKSF +PML++GGGGYT RN
Sbjct: 248 VMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRN 307
Query: 330 VSRLWTYETGLLNGVLLQPKLPEGIPFRD---WFGPDYSLHPTLDDLYENKNSKKFLENI 386
V+R WTYET V L ++P +P+ D +FGPD+ LH + ++ N+N+ ++LE I
Sbjct: 308 VARCWTYET----AVALDTEIPNELPYNDYFEYFGPDFKLHISPSNM-TNQNTNEYLEKI 362
Query: 387 RIRCLENIKYLQGAPSVRMDA 407
+ R EN++ L AP V+M A
Sbjct: 363 KQRLFENLRMLPHAPGVQMQA 383
>7292522 [B] KOG1342 Histone deacetylase complex catalytic component RPD3
Length = 521
Score = 441 bits (1133), Expect = e-123
Identities = 203/378 (53%), Positives = 283/378 (74%), Gaps = 4/378 (1%)
Query: 30 RVSYHFNSKVSQYHYGVKHPMKPFRLMLTDHLVSAYGLHKVMDLYETRSATKDELTKFHS 89
RV Y+++S + Y+YG HPMKP R+ +T +L+ YGL++ M++Y AT DE+TKFHS
Sbjct: 8 RVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTKFHS 67
Query: 90 EDYVNFLAKVTPDTLNKLPRGSLEKFNIGDDCPIFQGMFDYAALYAGASLDASRKLLNGQ 149
++YV FL + PD +++ + +++FN+G+DCP+F G++++ L AG S+ A+ KL
Sbjct: 68 DEYVRFLRSIRPDNMSEYNK-QMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQA 126
Query: 150 SEIAINWSGGLHHAKKNNPSGFCYVNDIVLAIVNLLRYHPRVLYIDIDLHHGDGVQEAFY 209
SEI INW GGLHHAKK+ SGFCYVNDIVL I+ LL+YH RVLYIDID+HHGDGV+EAFY
Sbjct: 127 SEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEAFY 186
Query: 210 TTDRVFTVSFHKYNGEFFPGTGDLDEIGCSRGKHFALNVPLQDGIEDDSYINLFKSIIDP 269
TTDRV TVSFHKY GE+FPGTGDL +IG +GK++A+N+PL+DG++DD+Y ++F II
Sbjct: 187 TTDRVMTVSFHKY-GEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPIISK 245
Query: 270 VITSFRPSVIIQQCGADSLGHDRLGCFNLNIKAHGECVRFVKSFGVPMLVVGGGGYTPRN 329
V+ +F+P+ ++ QCGADSL DRLGCFNL +K HG+CV FVK + +P L+VGGGGYT RN
Sbjct: 246 VMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTIRN 305
Query: 330 VSRLWTYETGLLNGVLLQPKLPEGIPFRDWFGPDYSLHPTLDDLYENKNSKKFLENIRIR 389
VSR WTYET + V + +LP F ++FGPD+ LH + ++ N+N+ ++LE I+ R
Sbjct: 306 VSRCWTYETSVALAVEIANELPYNDYF-EYFGPDFKLHISPSNM-TNQNTSEYLEKIKNR 363
Query: 390 CLENIKYLQGAPSVRMDA 407
EN++ L AP V++ A
Sbjct: 364 LFENLRMLPHAPGVQIQA 381
>YNL330c [B] KOG1342 Histone deacetylase complex catalytic component RPD3
Length = 433
Score = 434 bits (1115), Expect = e-121
Identities = 194/377 (51%), Positives = 282/377 (74%), Gaps = 4/377 (1%)
Query: 30 RVSYHFNSKVSQYHYGVKHPMKPFRLMLTDHLVSAYGLHKVMDLYETRSATKDELTKFHS 89
RV+Y +++ V Y YG HPMKP R+ + L+ YGL+K M++Y + ATK E+ +FH+
Sbjct: 20 RVAYFYDADVGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQFHT 79
Query: 90 EDYVNFLAKVTPDTLNKLPRGSLEKFNIGDDCPIFQGMFDYAALYAGASLDASRKLLNGQ 149
++Y++FL++VTPD L R S+ KFN+GDDCP+F G+++Y ++ G S++ + +L G+
Sbjct: 80 DEYIDFLSRVTPDNLEMFKRESV-KFNVGDDCPVFDGLYEYCSISGGGSMEGAARLNRGK 138
Query: 150 SEIAINWSGGLHHAKKNNPSGFCYVNDIVLAIVNLLRYHPRVLYIDIDLHHGDGVQEAFY 209
++A+N++GGLHHAKK+ SGFCY+NDIVL I+ LLRYHPRVLYIDID+HHGDGV+EAFY
Sbjct: 139 CDVAVNYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAFY 198
Query: 210 TTDRVFTVSFHKYNGEFFPGTGDLDEIGCSRGKHFALNVPLQDGIEDDSYINLFKSIIDP 269
TTDRV T SFHKY GEFFPGTG+L +IG GK++A+NVPL+DGI+D +Y ++F+ +I
Sbjct: 199 TTDRVMTCSFHKY-GEFFPGTGELRDIGVGAGKNYAVNVPLRDGIDDATYRSVFEPVIKK 257
Query: 270 VITSFRPSVIIQQCGADSLGHDRLGCFNLNIKAHGECVRFVKSFGVPMLVVGGGGYTPRN 329
++ ++PS ++ QCG DSL DRLGCFNL+++ H CV +VKSFG+PM+VVGGGGYT RN
Sbjct: 258 IMEWYQPSAVVLQCGGDSLSGDRLGCFNLSMEGHANCVNYVKSFGIPMMVVGGGGYTMRN 317
Query: 330 VSRLWTYETGLLNGVLLQPKLPEGIPFRDWFGPDYSLHPTLDDLYENKNSKKFLENIRIR 389
V+R W +ETGLLN V+L LP + +++GPDY L +++ N N+ ++L+ +
Sbjct: 318 VARTWCFETGLLNNVVLDKDLPYN-EYYEYYGPDYKLSVRPSNMF-NVNTPEYLDKVMTN 375
Query: 390 CLENIKYLQGAPSVRMD 406
N++ + APSV+++
Sbjct: 376 IFANLENTKYAPSVQLN 392
>Hs20551695 [B] KOG1342 Histone deacetylase complex catalytic component RPD3
Length = 488
Score = 433 bits (1113), Expect = e-121
Identities = 195/381 (51%), Positives = 283/381 (74%), Gaps = 10/381 (2%)
Query: 30 RVSYHFNSKVSQYHYGVKHPMKPFRLMLTDHLVSAYGLHKVMDLYETRSATKDELTKFHS 89
+V Y+++ + Y+YG HPMKP R+ +T +L+ YGL++ M++Y AT +E+TK+HS
Sbjct: 11 KVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHS 70
Query: 90 EDYVNFLAKVTPDTLNKLPRGSLEKFNIGDDCPIFQGMFDYAALYAGASLDASRKLLNGQ 149
++Y+ FL + PD +++ + +++FN+G+DCP+F G+F++ L G S+ + KL Q
Sbjct: 71 DEYIKFLRSIRPDNMSEYSK-QMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQ 129
Query: 150 SEIAINWSGGLHHAKKNNPSGFCYVNDIVLAIVNLLRYHPRVLYIDIDLHHGDGVQEAFY 209
+++A+NW+GGLHHAKK+ SGFCYVNDIVLAI+ LL+YH RVLYIDID+HHGDGV+EAFY
Sbjct: 130 TDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFY 189
Query: 210 TTDRVFTVSFHKYNGEFFPGTGDLDEIGCSRGKHFALNVPLQDGIEDDSYINLFKSIIDP 269
TTDRV TVSFHKY GE+FPGTGDL +IG +GK++A+N P++DGI+D+SY +FK II
Sbjct: 190 TTDRVMTVSFHKY-GEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISK 248
Query: 270 VITSFRPSVIIQQCGADSLGHDRLGCFNLNIKAHGECVRFVKSFGVPMLVVGGGGYTPRN 329
V+ ++PS ++ QCGADSL DRLGCFNL +K H +CV VK+F +P+L++GGGGYT RN
Sbjct: 249 VMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRN 308
Query: 330 VSRLWTYETGLLNGVLLQPKLPEGIPFRD---WFGPDYSLHPTLDDLYENKNSKKFLENI 386
V+R WTYET V L ++P +P+ D +FGPD+ LH + ++ N+N+ +++E I
Sbjct: 309 VARCWTYET----AVALDCEIPNELPYNDYFEYFGPDFKLHISPSNM-TNQNTPEYMEKI 363
Query: 387 RIRCLENIKYLQGAPSVRMDA 407
+ R EN++ L AP V+M A
Sbjct: 364 KQRLFENLRMLPHAPGVQMQA 384
>SPBC36.05c [B] KOG1342 Histone deacetylase complex catalytic component RPD3
Length = 405
Score = 428 bits (1100), Expect = e-120
Identities = 200/379 (52%), Positives = 281/379 (73%), Gaps = 10/379 (2%)
Query: 30 RVSYHFNSKVSQYHYGVKHPMKPFRLMLTDHLVSAYGLHKVMDLYETRSATKDELTKFHS 89
+VSY ++ V YHYG +HPMKP R+ + +LV Y L++ +++ AT++++T+ H+
Sbjct: 7 KVSYFYDEDVGNYHYGPQHPMKPHRVRMVHNLVVNYNLYEKLNVITPVRATRNDMTRCHT 66
Query: 90 EDYVNFLAKVTPDTLNKLPRGSLEKFNIGDDCPIFQGMFDYAALYAGASLDASRKLLNGQ 149
++Y+ FL +VTPDT+ K L KFN+GDDCP+F G++++ ++ AG S+ A+++L +G
Sbjct: 67 DEYIEFLWRVTPDTMEKFQPHQL-KFNVGDDCPVFDGLYEFCSISAGGSIGAAQELNSGN 125
Query: 150 SEIAINWSGGLHHAKKNNPSGFCYVNDIVLAIVNLLRYHPRVLYIDIDLHHGDGVQEAFY 209
+EIAINW+GGLHHAKK SGFCYVNDI LA + LL+YH RVLYIDID+HHGDGV+E FY
Sbjct: 126 AEIAINWAGGLHHAKKREASGFCYVNDIALAALELLKYHQRVLYIDIDVHHGDGVEEFFY 185
Query: 210 TTDRVFTVSFHKYNGEFFPGTGDLDEIGCSRGKHFALNVPLQDGIEDDSYINLFKSIIDP 269
TTDRV T SFHK+ GE+FPGTG + + G GK++A+NVPL+DGI+D+SY ++FK +I
Sbjct: 186 TTDRVMTCSFHKF-GEYFPGTGHIKDTGIGTGKNYAVNVPLRDGIDDESYESVFKPVISH 244
Query: 270 VITSFRPSVIIQQCGADSLGHDRLGCFNLNIKAHGECVRFVKSFGVPMLVVGGGGYTPRN 329
++ FRP +I QCG DSL DRLGCFNL++K H CV FVKSF +PM+ VGGGGYT RN
Sbjct: 245 IMQWFRPEAVILQCGTDSLAGDRLGCFNLSMKGHSMCVDFVKSFNLPMICVGGGGYTVRN 304
Query: 330 VSRLWTYETGLLNGVLLQPKLPEGIPFRD---WFGPDYSLHPTLDDLYENKNSKKFLENI 386
V+R+WTYETGLL G +L E +P+ D ++GPDY L+ L + EN N++++L++I
Sbjct: 305 VARVWTYETGLLAG----EELDENLPYNDYLQYYGPDYKLN-VLSNNMENHNTRQYLDSI 359
Query: 387 RIRCLENIKYLQGAPSVRM 405
+EN++ L APSV+M
Sbjct: 360 TSEIIENLRNLSFAPSVQM 378
>Hs4557641 [B] KOG1342 Histone deacetylase complex catalytic component RPD3
Length = 488
Score = 426 bits (1095), Expect = e-119
Identities = 195/381 (51%), Positives = 278/381 (72%), Gaps = 10/381 (2%)
Query: 30 RVSYHFNSKVSQYHYGVKHPMKPFRLMLTDHLVSAYGLHKVMDLYETRSATKDELTKFHS 89
+V Y+++ + Y+YG HPMKP R+ +T +L+ YGL++ M++Y AT +E+TK+HS
Sbjct: 11 KVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHS 70
Query: 90 EDYVNFLAKVTPDTLNKLPRGSLEKFNIGDDCPIFQGMFDYAALYAGASLDASRKLLNGQ 149
++Y+ FL + PD +++ + + FN+G+DCP F G+F++ L G S+ + KL Q
Sbjct: 71 DEYIKFLRSIRPDNMSEYSK-QMHIFNVGEDCPAFDGLFEFCQLSTGGSVAGAVKLNRQQ 129
Query: 150 SEIAINWSGGLHHAKKNNPSGFCYVNDIVLAIVNLLRYHPRVLYIDIDLHHGDGVQEAFY 209
+++A+NW+GGLHHAKK SGFCYVNDIVLAI+ LL+YH RVLYIDID+HHGDGV+EAFY
Sbjct: 130 TDMAVNWAGGLHHAKKYEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFY 189
Query: 210 TTDRVFTVSFHKYNGEFFPGTGDLDEIGCSRGKHFALNVPLQDGIEDDSYINLFKSIIDP 269
TTDRV TVSFHKY GE+FPGTGDL +IG +GK++A+N P+ DGI+D+SY +FK II
Sbjct: 190 TTDRVMTVSFHKY-GEYFPGTGDLRDIGAGKGKYYAVNFPMCDGIDDESYGQIFKPIISK 248
Query: 270 VITSFRPSVIIQQCGADSLGHDRLGCFNLNIKAHGECVRFVKSFGVPMLVVGGGGYTPRN 329
V+ ++PS ++ QCGADSL DRLGCFNL +K H +CV VK+F +P+L++GGGGYT RN
Sbjct: 249 VMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRN 308
Query: 330 VSRLWTYETGLLNGVLLQPKLPEGIPFRD---WFGPDYSLHPTLDDLYENKNSKKFLENI 386
V+R WTYET V L ++P +P+ D +FGPD+ LH + ++ N+N+ +++E I
Sbjct: 309 VARCWTYET----AVALDCEIPNELPYNDYFEYFGPDFKLHISPSNM-TNQNTPEYMEKI 363
Query: 387 RIRCLENIKYLQGAPSVRMDA 407
+ R EN++ L AP V+M A
Sbjct: 364 KQRLFENLRMLPHAPGVQMQA 384
>At4g38130 [B] KOG1342 Histone deacetylase complex catalytic component RPD3
Length = 501
Score = 426 bits (1095), Expect = e-119
Identities = 204/374 (54%), Positives = 275/374 (72%), Gaps = 4/374 (1%)
Query: 30 RVSYHFNSKVSQYHYGVKHPMKPFRLMLTDHLVSAYGLHKVMDLYETRSATKDELTKFHS 89
+V Y ++ +V Y+YG HPMKP R+ +T L++ YGL + M + + A +L +FH+
Sbjct: 18 KVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKPFPARDRDLCRFHA 77
Query: 90 EDYVNFLAKVTPDTLNKLPRGSLEKFNIGDDCPIFQGMFDYAALYAGASLDASRKLLNGQ 149
+DYV+FL +TP+T R L++FN+G+DCP+F G++ + YAG S+ S KL +G
Sbjct: 78 DDYVSFLRSITPETQQDQIR-QLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGSVKLNHGL 136
Query: 150 SEIAINWSGGLHHAKKNNPSGFCYVNDIVLAIVNLLRYHPRVLYIDIDLHHGDGVQEAFY 209
+IAINW+GGLHHAKK SGFCYVNDIVLAI+ LL+ H RVLY+DID+HHGDGV+EAFY
Sbjct: 137 CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFY 196
Query: 210 TTDRVFTVSFHKYNGEFFPGTGDLDEIGCSRGKHFALNVPLQDGIEDDSYINLFKSIIDP 269
TDRV TVSFHK+ G++FPGTG + +IG GK+++LNVPL DGI+D+SY LFK I+
Sbjct: 197 ATDRVMTVSFHKF-GDYFPGTGHIQDIGYGSGKYYSLNVPLDDGIDDESYHLLFKPIMGK 255
Query: 270 VITSFRPSVIIQQCGADSLGHDRLGCFNLNIKAHGECVRFVKSFGVPMLVVGGGGYTPRN 329
V+ FRP ++ QCGADSL DRLGCFNL+IK H ECV+F++SF VP+L++GGGGYT RN
Sbjct: 256 VMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRN 315
Query: 330 VSRLWTYETGLLNGVLLQPKLPEGIPFRDWFGPDYSLHPTLDDLYENKNSKKFLENIRIR 389
V+R W YETG+ GV ++ K+PE + ++FGPDY+LH ++ ENKNS++ LE IR
Sbjct: 316 VARCWCYETGVALGVEVEDKMPEH-EYYEYFGPDYTLHVAPSNM-ENKNSRQMLEEIRND 373
Query: 390 CLENIKYLQGAPSV 403
L N+ LQ APSV
Sbjct: 374 LLHNLSKLQHAPSV 387
>At3g44680 [B] KOG1342 Histone deacetylase complex catalytic component RPD3
Length = 419
Score = 422 bits (1086), Expect = e-118
Identities = 197/370 (53%), Positives = 269/370 (72%), Gaps = 13/370 (3%)
Query: 39 VSQYHYGVKHPMKPFRLMLTDHLVSAYGLHKVMDLYETRSATKDELTKFHSEDYVNFLAK 98
V ++G HPMKP RL +T HL+ AYGLH M++Y A E+ +FHS DYV FL +
Sbjct: 12 VGSVYFGPNHPMKPHRLCMTHHLILAYGLHSKMEVYRPHKAYPIEMAQFHSPDYVEFLQR 71
Query: 99 VTPDTLNKLPRGSLEKFNIGDDCPIFQGMFDYAALYAGASLDASRKLLNGQSEIAINWSG 158
+ P+ N P + ++N+G+DCP+F+ +F++ LYAG ++DA+R+L N +IAINW+G
Sbjct: 72 INPENQNLFPN-EMARYNLGEDCPVFEDLFEFCQLYAGGTIDAARRLNNKLCDIAINWAG 130
Query: 159 GLHHAKKNNPSGFCYVNDIVLAIVNLLRYHPRVLYIDIDLHHGDGVQEAFYTTDRVFTVS 218
GLHHAKK + SGFCY+ND+VL I+ LL++HPRVLYIDID+HHGDGV+EAFY TDRV TVS
Sbjct: 131 GLHHAKKCDASGFCYINDLVLGILELLKHHPRVLYIDIDVHHGDGVEEAFYFTDRVMTVS 190
Query: 219 FHKYNGEFFPGTGDLDEIGCSRGKHFALNVPLQDGIEDDSYINLFKSIIDPVITSFRPSV 278
FHK+ +FFPGTGD+ EIG GK +A+NVPL+DGI+D S+ LF+++++ ++P
Sbjct: 191 FHKFGDKFFPGTGDVKEIGEREGKFYAINVPLKDGIDDSSFNRLFRTVVE----IYQPGA 246
Query: 279 IIQQCGADSLGHDRLGCFNLNIKAHGECVRFVKSFGVPMLVVGGGGYTPRNVSRLWTYET 338
I+ QCGADSL DRLGCFNL+I H ECV+FVK F +P+LV GGGGYT NV+R WT ET
Sbjct: 247 IVLQCGADSLARDRLGCFNLSIDGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVET 306
Query: 339 GLLNGVLLQPKLPEGIPFRD---WFGPDYSLHPTLDDLYENKNSKKFLENIRIRCLENIK 395
G+LL +LP IP D +F PD+SL + EN N+K ++ +I+++ LEN++
Sbjct: 307 ----GILLDTELPNEIPENDYIKYFAPDFSLKIPGGHI-ENLNTKSYISSIKVQILENLR 361
Query: 396 YLQGAPSVRM 405
Y+Q APSV+M
Sbjct: 362 YIQHAPSVQM 371
>CE08952 [B] KOG1342 Histone deacetylase complex catalytic component RPD3
Length = 461
Score = 410 bits (1054), Expect = e-114
Identities = 193/379 (50%), Positives = 269/379 (70%), Gaps = 10/379 (2%)
Query: 30 RVSYHFNSKVSQYHYGVKHPMKPFRLMLTDHLVSAYGLHKVMDLYETRSATKDELTKFHS 89
RV+Y+++S + Y+YG H MKP R+ +T HLV YGL++ ++++ A+ +++T+FHS
Sbjct: 14 RVAYYYDSNIGNYYYGQGHVMKPHRIRMTHHLVLNYGLYRNLEIFRPFPASFEDMTRFHS 73
Query: 90 EDYVNFLAKVTPDTLNKLPRGSLEKFNIGDDCPIFQGMFDYAALYAGASLDASRKLLNGQ 149
++Y+ FL PD L + L KFN+G+DCP+F G++++ L +G SL A+ KL +
Sbjct: 74 DEYMTFLKSANPDNLKSFNKQML-KFNVGEDCPLFDGLYEFCQLSSGGSLAAATKLNKQK 132
Query: 150 SEIAINWSGGLHHAKKNNPSGFCYVNDIVLAIVNLLRYHPRVLYIDIDLHHGDGVQEAFY 209
+IAINW GGLHHAKK+ SGFCY NDIVL I+ LL+YH RVLY+DID+HHGDGV+EAFY
Sbjct: 133 VDIAINWMGGLHHAKKSEASGFCYTNDIVLGILELLKYHKRVLYVDIDVHHGDGVEEAFY 192
Query: 210 TTDRVFTVSFHKYNGEFFPGTGDLDEIGCSRGKHFALNVPLQDGIEDDSYINLFKSIIDP 269
TTDRV TVSFHKY G+FFPGTGDL +IG +GK +++NVPL+DGI D SY ++FK I+
Sbjct: 193 TTDRVMTVSFHKY-GDFFPGTGDLKDIGAGKGKLYSVNVPLRDGITDVSYQSIFKPIMTK 251
Query: 270 VITSFRPSVIIQQCGADSLGHDRLGCFNLNIKAHGECVRFVKSFGVPMLVVGGGGYTPRN 329
V+ F P ++ QCGADSL DRLG FNL +K HGEC RF +S+ VP+++VGGGGYTPRN
Sbjct: 252 VMERFDPCAVVLQCGADSLNGDRLGPFNLTLKGHGECARFFRSYNVPLMMVGGGGYTPRN 311
Query: 330 VSRLWTYETGLLNGVLLQPKLPEGIPFRD---WFGPDYSLHPTLDDLYENKNSKKFLENI 386
V+R WTYET + + ++P +P+ D +FGP+Y LH + N+NS L +
Sbjct: 312 VARCWTYET----SIAVDKEVPNELPYNDYFEYFGPNYRLHIESSNA-ANENSSDMLAKL 366
Query: 387 RIRCLENIKYLQGAPSVRM 405
+ + N++ L PSV+M
Sbjct: 367 QTDVIANLEQLTFVPSVQM 385
>CE18116 [B] KOG1342 Histone deacetylase complex catalytic component RPD3
Length = 465
Score = 403 bits (1036), Expect = e-112
Identities = 190/381 (49%), Positives = 266/381 (68%), Gaps = 9/381 (2%)
Query: 30 RVSYHFNSKVSQYHYGVKHPMKPFRLMLTDHLVSAYGLHKVMDLYETRSATKDELTKFHS 89
RVSY+++ ++YG HPMKP R+ +T L+ YGL++ +++ A+ E+T++HS
Sbjct: 9 RVSYYYDGDFGNFYYGQGHPMKPHRVRMTHSLIVNYGLYRKLNVMRPARASFSEITRYHS 68
Query: 90 EDYVNFLAKVTPDTLNKLPRGSLEKFNIGDDCPIFQGMFDYAALYAGASLDASRKLLNGQ 149
+DY+NFL V D ++ + +F++G+DCP+F GM+++ L G SL A+ +L +
Sbjct: 69 DDYINFLRNVKSDNMSTFT-DQMARFSVGEDCPVFDGMYEFCQLSCGGSLAAAARLNRQE 127
Query: 150 SEIAINWSGGLHHAKKNNPSGFCYVNDIVLAIVNLLRYHPRVLYIDIDLHHGDGVQEAFY 209
SEIAINW GGLHHAKK+ SGFCY NDIVLAI+ LL++H RVLYIDID+HHGDGV+EAFY
Sbjct: 128 SEIAINWMGGLHHAKKSEASGFCYSNDIVLAILELLKHHKRVLYIDIDVHHGDGVEEAFY 187
Query: 210 TTDRVFTVSFHKYNGEFFPGTGDLDEIGCSRGKHFALNVPLQDGIEDDSYINLFKSIIDP 269
TTDRV TVSFHK+ GE+FPGTGDL ++G GK++ALNVPL+DG++D +Y +F++I+
Sbjct: 188 TTDRVMTVSFHKH-GEYFPGTGDLKDVGAGSGKYYALNVPLRDGVDDVTYERIFRTIMGE 246
Query: 270 VITSFRPSVIIQQCGADSLGHDRLGCFNLNIKAHGECVRFVKSFGVPMLVVGGGGYTPRN 329
V+ F+P ++ QCGADSL DRLG FNL HG+CV ++KSF VP+L+VGGGGYT RN
Sbjct: 247 VMARFQPEAVVLQCGADSLAGDRLGVFNLTTYGHGKCVEYMKSFNVPLLLVGGGGYTIRN 306
Query: 330 VSRLWTYETGLLNGVLLQPKLPEGIPFRDWFG---PDYSLHPTLDDLYENKNSKKFLENI 386
VSR W YET + L ++ + +P D+F PDY LH N N+ +F++
Sbjct: 307 VSRCWLYET----AIALNQEVSDDLPLHDYFDYFIPDYKLHIKPLAALSNFNTPEFIDQT 362
Query: 387 RIRCLENIKYLQGAPSVRMDA 407
+ LEN+K L PSV+M +
Sbjct: 363 IVALLENLKQLPHVPSVQMQS 383
>At5g63110 [B] KOG1342 Histone deacetylase complex catalytic component RPD3
Length = 471
Score = 401 bits (1031), Expect = e-112
Identities = 191/376 (50%), Positives = 266/376 (69%), Gaps = 4/376 (1%)
Query: 30 RVSYHFNSKVSQYHYGVKHPMKPFRLMLTDHLVSAYGLHKVMDLYETRSATKDELTKFHS 89
RVSY + + Y+YG HPMKP R+ + L+ Y LH+ +++ A ++ +FHS
Sbjct: 20 RVSYFYEPTIGDYYYGQGHPMKPHRIRMAHSLIIHYHLHRRLEISRPSLADASDIGRFHS 79
Query: 90 EDYVNFLAKVTPDTLNKLPRG-SLEKFNIGDDCPIFQGMFDYAALYAGASLDASRKLLNG 148
+YV+FLA V+P+++ +L +FN+G+DCP+F G+FD+ AG S+ A+ KL
Sbjct: 80 PEYVDFLASVSPESMGDPSAARNLRRFNVGEDCPVFDGLFDFCRASAGGSIGAAVKLNRQ 139
Query: 149 QSEIAINWSGGLHHAKKNNPSGFCYVNDIVLAIVNLLRYHPRVLYIDIDLHHGDGVQEAF 208
++IAINW GGLHHAKK+ SGFCYVNDIVL I+ LL+ RVLYIDID+HHGDGV+EAF
Sbjct: 140 DADIAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKMFKRVLYIDIDVHHGDGVEEAF 199
Query: 209 YTTDRVFTVSFHKYNGEFFPGTGDLDEIGCSRGKHFALNVPLQDGIEDDSYINLFKSIID 268
YTTDRV TVSFHK+ G+FFPGTG + ++G +GK++ALNVPL DG++D+S+ +LF+ +I
Sbjct: 200 YTTDRVMTVSFHKF-GDFFPGTGHIRDVGAEKGKYYALNVPLNDGMDDESFRSLFRPLIQ 258
Query: 269 PVITSFRPSVIIQQCGADSLGHDRLGCFNLNIKAHGECVRFVKSFGVPMLVVGGGGYTPR 328
V+ ++P ++ QCGADSL DRLGCFNL++K H +C+RF++S+ VP++V+GGGGYT R
Sbjct: 259 KVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSYNVPLMVLGGGGYTIR 318
Query: 329 NVSRLWTYETGLLNGVLLQPKLPEGIPFRDWFGPDYSLHPTLDDLYENKNSKKFLENIRI 388
NV+R W YET + GV KLP F ++FGPDY+LH + EN N+ K +E IR
Sbjct: 319 NVARCWCYETAVAVGVEPDNKLPYNEYF-EYFGPDYTLHVDPSPM-ENLNTPKDMERIRN 376
Query: 389 RCLENIKYLQGAPSVR 404
LE + L APSV+
Sbjct: 377 TLLEQLSGLIHAPSVQ 392
>ECU03g1370 [B] KOG1342 Histone deacetylase complex catalytic component RPD3
Length = 416
Score = 388 bits (996), Expect = e-107
Identities = 181/379 (47%), Positives = 271/379 (70%), Gaps = 10/379 (2%)
Query: 30 RVSYHFNSKVSQYHYGVKHPMKPFRLMLTDHLVSAYGLHKVMDLYETRSATKDELTKFHS 89
RV Y ++ ++ + Y + HPMKP R+ +T L+ Y L+K MD+ A+ + LT FH+
Sbjct: 5 RVVYFYDPEIGCFSYAMGHPMKPLRVKMTHTLLVGYELYKYMDVLRPFQASYENLTNFHA 64
Query: 90 EDYVNFLAKVTPDTLNKLPRGSLEKFNIGDDCPIFQGMFDYAALYAGASLDASRKLLNGQ 149
DY+NFL+ V+ + + ++ + L KFNI DDCP+F G++DY L +G S+ A++K+ +G+
Sbjct: 65 VDYINFLSSVSSENMEEMIK-DLHKFNIRDDCPVFPGLYDYCRLTSGGSIYAAQKINSGK 123
Query: 150 SEIAINWSGGLHHAKKNNPSGFCYVNDIVLAIVNLLRYHPRVLYIDIDLHHGDGVQEAFY 209
++AINW+GGLHHAK+ SGFCYVNDIVL I+ LL+Y+ R+LYIDID+HHGDGV+EAFY
Sbjct: 124 YDVAINWAGGLHHAKRGEASGFCYVNDIVLGILELLKYNKRILYIDIDIHHGDGVEEAFY 183
Query: 210 TTDRVFTVSFHKYNGEFFPGTGDLDEIGCSRGKHFALNVPLQDGIEDDSYINLFKSIIDP 269
TTDRV TVSFHKY G++FPGTG + + G ++GK +++NVPL+DGI+D+SY ++FK I+
Sbjct: 184 TTDRVMTVSFHKY-GDYFPGTGMVTDTGLAKGKGYSVNVPLKDGIDDESYFSIFKPIVSK 242
Query: 270 VITSFRPSVIIQQCGADSLGHDRLGCFNLNIKAHGECVRFVKSFGVPMLVVGGGGYTPRN 329
VI +++P+ I+ Q GADSL D+LGCFNL+ H C++FV+SF +P++++GGGGYT N
Sbjct: 243 VIETYQPNAIVLQSGADSLSGDKLGCFNLSHLGHSRCIKFVQSFNIPLILLGGGGYTIGN 302
Query: 330 VSRLWTYETGLLNGVLLQPKLPEGIPFR---DWFGPDYSLHPTLDDLYENKNSKKFLENI 386
VS+ W Y T V+L +P IP+ D++ P Y + ++ N+N+++ LE+I
Sbjct: 303 VSKAWAYGT----SVVLDVDIPREIPYNEYFDYYAPTYRIDVPTSNM-ANQNTREGLEDI 357
Query: 387 RIRCLENIKYLQGAPSVRM 405
+ EN++ L APSV+M
Sbjct: 358 IAKVYENLRSLSHAPSVQM 376
>CE01472 [B] KOG1342 Histone deacetylase complex catalytic component RPD3
Length = 507
Score = 387 bits (995), Expect = e-107
Identities = 191/405 (47%), Positives = 266/405 (65%), Gaps = 2/405 (0%)
Query: 1 MSSDTLKFDEKTEAEKPLFDCDFGTSYSPRVSYHFNSKVSQYHYGVKHPMKPFRLMLTDH 60
MSSD K D + + + D V+Y+++ V +HYG HPMKP RL++ +
Sbjct: 1 MSSDKFKLDTLFDDNDEIIEPDGADVKKRNVAYYYHKDVGHFHYGQLHPMKPQRLVVCND 60
Query: 61 LVSAYGLHKVMDLYETRSATKDELTKFHSEDYVNFLAKVTPDTLNKLPRGSLEKFNIGDD 120
LV +Y + K M + E+ +++ FH+EDYVNFL VTP +P L +FNIG+D
Sbjct: 61 LVVSYEMPKYMTVVESPKLDAADISVFHTEDYVNFLQTVTPKLGLTMPDDVLRQFNIGED 120
Query: 121 CPIFQGMFDYAALYAGASLDASRKLLNGQSEIAINWSGGLHHAKKNNPSGFCYVNDIVLA 180
CPIF G++DY LYAG S++ +R+L + ++I INW GGLHHAKK+ SGFCYVNDIVL
Sbjct: 121 CPIFAGLWDYCTLYAGGSVEGARRLNHKMNDIVINWPGGLHHAKKSEASGFCYVNDIVLG 180
Query: 181 IVNLLRYHPRVLYIDIDLHHGDGVQEAFYTTDRVFTVSFHKYNGEFFPGTGDLDEIGCSR 240
I+ LL+YH RVLYIDID+HHGDGVQEAF +DRV TVSFH++ G++FPG+G + + G
Sbjct: 181 ILELLKYHKRVLYIDIDIHHGDGVQEAFNNSDRVMTVSFHRF-GQYFPGSGSIMDKGVGP 239
Query: 241 GKHFALNVPLQDGIEDDSYINLFKSIIDPVITSFRPSVIIQQCGADSLGHDRLGCFNLNI 300
GK+FA+NVPL I D+ Y+ LF+S+I V +F P I+ QCG+DSL DRLG F L+
Sbjct: 240 GKYFAINVPLMAAIRDEPYLKLFESVISGVEENFNPEAIVLQCGSDSLCEDRLGQFALSF 299
Query: 301 KAHGECVRFVKSFGVPMLVVGGGGYTPRNVSRLWTYETGLLNGVLLQPKLPEGIPFRDWF 360
AH V++VKS G P++V+GGGGYT RNV+R W ETG++ G+ + ++P + +F
Sbjct: 300 NAHARAVKYVKSLGKPLMVLGGGGYTLRNVARCWALETGVILGLRMDDEIPGTSLYSHYF 359
Query: 361 GPDYSLHPTLDDLYENKNSKKFLENIRIRCLENIKYLQGAPSVRM 405
P L P L + NS +L +I L ++ ++GAPSV+M
Sbjct: 360 TPRL-LRPNLVPKMNDANSAAYLASIEKETLACLRMIRGAPSVQM 403
>ECU09g0670 [B] KOG1342 Histone deacetylase complex catalytic component RPD3
Length = 344
Score = 327 bits (837), Expect = 3e-89
Identities = 167/364 (45%), Positives = 227/364 (61%), Gaps = 25/364 (6%)
Query: 31 VSYHFNSKVSQYHYGVKHPMKPFRLMLTDHLVSAYGLHKVMDLYETRSATKDELTKFHSE 90
V+Y F+ +V +HYG +HPMKPFR ++T LV ++GL K M + + L+ +H+E
Sbjct: 3 VAYMFDEEVGLFHYGPRHPMKPFRTVVTHSLVKSFGLDKKMTIVKPEVFP---LSSYHTE 59
Query: 91 DYVNFLAKVTPDTLNKLPRGSLEKFNIGDDCPIFQGMFDYAALYAGASLDASRKLLNGQS 150
+Y+ L K N+ P DCP F G+ + LY AS++++ L G
Sbjct: 60 EYLGNLGK------NETP-----------DCPNFIGLPRFCELYGSASINSAMILSEGAY 102
Query: 151 EIAINWSGGLHHAKKNNPSGFCYVNDIVLAIVNLLRYHPRVLYIDIDLHHGDGVQEAFYT 210
INWSGGLHHA K PSGFC+VNDIVLAI+ LL+ + RV+YIDID+HHGDGV+EAF
Sbjct: 103 STVINWSGGLHHAHKAIPSGFCHVNDIVLAILELLKTYRRVMYIDIDVHHGDGVEEAFLE 162
Query: 211 TDRVFTVSFHKYNGEFFPGTGDLDEIGCSRGKHFALNVPLQDGIEDDSYINLFKSIIDPV 270
DRV T+S HKY FFP TG L G H A+NVPL GI+D SY +F+ I++
Sbjct: 163 CDRVLTLSLHKYGDGFFPETGTLITTG-----HRAVNVPLLSGIDDPSYRYIFEPIVESC 217
Query: 271 ITSFRPSVIIQQCGADSLGHDRLGCFNLNIKAHGECVRFVKSFGVPMLVVGGGGYTPRNV 330
+ F P I+ QCGADSLG DRLGCFNL+I+ H CVRFV S G+P+L +GGGGYT NV
Sbjct: 218 VRRFSPDAIVLQCGADSLGEDRLGCFNLSIEGHASCVRFVSSLGIPLLCLGGGGYTLTNV 277
Query: 331 SRLWTYETGLLNGVLLQPKLPEGIPFRDWFGPDYSLHPTLDDLYENKNSKKFLENIRIRC 390
+R W YET +L G ++P PF +FGP ++++P Y N+N ++L+ +
Sbjct: 278 ARCWAYETAVLCGEDPATEIPSDNPFYTYFGPLHTVNPVFKRKYANRNDVEYLDMVMSFI 337
Query: 391 LENI 394
L+ +
Sbjct: 338 LDKV 341
>At5g35600 [B] KOG1342 Histone deacetylase complex catalytic component RPD3
Length = 409
Score = 327 bits (837), Expect = 3e-89
Identities = 170/380 (44%), Positives = 239/380 (62%), Gaps = 14/380 (3%)
Query: 30 RVSYHFNSKVSQYHYGVKHPMKPFRLMLTDHLVSAYGLHKVMDLYETRSATKDELTKFHS 89
RVSY + + Y+YGV P KP R+ +T +L+ +Y LH+ M++ A + KFHS
Sbjct: 11 RVSYFYEPMIGDYYYGVNQPTKPQRIRVTHNLILSYNLHRHMEINHPDLADASDFEKFHS 70
Query: 90 EDYVNFLAKVTPDTLNKLPRGS----LEKFNIGDDC--PIFQGMFDYAALYAGASLDASR 143
+Y+NFL VTP+T+ P S L++FN+ D P+F +FDY YAG S+ A+
Sbjct: 71 LEYINFLKSVTPETVTD-PHPSVSENLKRFNVDVDWDGPVFHNLFDYCRAYAGGSISAAA 129
Query: 144 KLLNGQSEIAINWSGGLHHAKKNNPSGFCYVNDIVLAIVNLLRYHPRVLYIDIDLHHGDG 203
KL +++IAINW+GG+HH KK+ SGF YVND+VLAI+ LL+ RVLYI+I HGD
Sbjct: 130 KLNRQEADIAINWAGGMHHVKKDKASGFGYVNDVVLAILELLKSFKRVLYIEIGFPHGDE 189
Query: 204 VQEAFYTTDRVFTVSFHKYNGEFFPGTGDLDEIGCSRGKHFALNVPLQDGIEDDSYINLF 263
V+EAF TDRV TVSFHK TGD+ + G +G++++LN PL+DG++D S LF
Sbjct: 190 VEEAFKDTDRVMTVSFHKVGD-----TGDISDYGEGKGQYYSLNAPLKDGLDDFSLRGLF 244
Query: 264 KSIIDPVITSFRPSVIIQQCGADSLGHDRLGCFNLNIKAHGECVRFVKSFGVPMLVVGGG 323
+I + + P VI+ QCGADSL D G FNL+IK HG+C+++V+SF VP++++GGG
Sbjct: 245 IPVIHRAMEIYEPEVIVLQCGADSLAGDPFGTFNLSIKGHGDCLQYVRSFNVPLMILGGG 304
Query: 324 GYTPRNVSRLWTYETGLLNGVLLQPKLPEGIPFRDWFGPDYSLHPTLDDLYENKNSKKFL 383
GYT NV+R W YET + G L LP G + +F PDY LH L +N N++ +
Sbjct: 305 GYTLPNVARCWCYETAIAVGEQLDNDLP-GNDYMKYFRPDYKLH-ILPTNRQNLNTRLDI 362
Query: 384 ENIRIRCLENIKYLQGAPSV 403
+R L + + APSV
Sbjct: 363 ITMRETLLAQLSLVMHAPSV 382
>Hs8923769 [B] KOG1342 Histone deacetylase complex catalytic component RPD3
Length = 377
Score = 288 bits (738), Expect = 9e-78
Identities = 134/318 (42%), Positives = 211/318 (66%), Gaps = 3/318 (0%)
Query: 52 PFRLMLTDHLVSAYGLHKVMDLYETRSATKDELTKFHSEDYVNFLAKVTPDTLNKLPRGS 111
P R + L+ AY LHK M + + + A+ +E+ FH++ Y+ L KV+ + + P S
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHP-DS 93
Query: 112 LEKFNIGDDCPIFQGMFDYAALYAGASLDASRKLLNGQSEIAINWSGGLHHAKKNNPSGF 171
+E + +G DCP +G+FDYAA GA++ A++ L++G ++AINWSGG HHAKK+ SGF
Sbjct: 94 IE-YGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGF 152
Query: 172 CYVNDIVLAIVNLLRYHPRVLYIDIDLHHGDGVQEAFYTTDRVFTVSFHKYNGEFFPGTG 231
CY+ND VL I+ L R R+LY+D+DLHHGDGV++AF T +V TVS HK++ FFPGTG
Sbjct: 153 CYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTG 212
Query: 232 DLDEIGCSRGKHFALNVPLQDGIEDDSYINLFKSIIDPVITSFRPSVIIQQCGADSLGHD 291
D+ ++G +G+++++NVP+QDGI+D+ Y + +S++ V +F P ++ Q GAD++ D
Sbjct: 213 DVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGD 272
Query: 292 RLGCFNLNIKAHGECVRFVKSFGVPMLVVGGGGYTPRNVSRLWTYETGLLNGVLLQPKLP 351
+ FN+ G+C++++ + + L++GGGGY N +R WTY TG++ G L ++P
Sbjct: 273 PMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIP 332
Query: 352 EGIPFRDWFGPDYSLHPT 369
+ F +GPDY L T
Sbjct: 333 DH-EFFTAYGPDYVLEIT 349
>YPR068c [B] KOG1342 Histone deacetylase complex catalytic component RPD3
Length = 470
Score = 163 bits (412), Expect = 6e-40
Identities = 91/230 (39%), Positives = 133/230 (57%), Gaps = 8/230 (3%)
Query: 113 EKFNIGDDCPIFQGMFDYAALYAGASLDASRKLLNGQSEIAINWSGGLHHAKKNNPSGFC 172
+++N+ DCPIF + Y + GA+L+ L + I INW GG HHA K SGFC
Sbjct: 162 KQYNLEGDCPIFSYLPMYCQVITGATLNLLDHLSPTERLIGINWDGGRHHAFKQRASGFC 221
Query: 173 YVNDIVLAIVNLLRYH-PRVLYIDIDLHHGDGVQEAFYTTDRVFTVSFHKYNGEFFPGTG 231
Y+ND+VL I L + ++ Y+D DLHHGDGV++AF + ++ T+S H Y FFPGTG
Sbjct: 222 YINDVVLLIQRLRKAKLNKITYVDFDLHHGDGVEKAFQYSKQIQTISVHLYEPGFFPGTG 281
Query: 232 DLDEIGCSRGKHFALNVPLQDGIEDDSYINLFKS-IIDPVITSFRPSVIIQQCGADSLGH 290
L + SR +N+PL+ G DD+Y+ L S I++P+I P +I +CG D L
Sbjct: 282 SLSD---SRKDKNVVNIPLKHGC-DDNYLELIASKIVNPLIERHEPEALIIECGGDGLLG 337
Query: 291 DRLGCFNLNIKAHGE-CVRFVKSF-GVPMLVVGGGGYTPRNVSRLWTYET 338
DR + L I+ + +KS+ + ++GGGGY +SR +TY T
Sbjct: 338 DRFNEWQLTIRGLSRIIINIMKSYPRAHIFLLGGGGYNDLLMSRFYTYLT 387
>7293057 [B] KOG1343 Histone deacetylase complex catalytic component HDA1
Length = 883
Score = 133 bits (334), Expect = 6e-31
Identities = 92/304 (30%), Positives = 149/304 (48%), Gaps = 12/304 (3%)
Query: 48 HPMKPFRLMLTDHLVSAYGLHKVMDLYETRSATKDELTKFHSEDYVNFLAKVTPDTLNKL 107
HP +P R+ + YGL K M R+AT DE+ H+ +VN + ++ L +
Sbjct: 478 HPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRL----LGRE 533
Query: 108 PRGSLEKFNIGDDCPIFQGMFDYAALYAGASLDASRKLLNGQSEIAI-NWSGGLHHAKKN 166
P+ + I + + FD A L AG L A +L G+S I N HHA+++
Sbjct: 534 PKELHDAAGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGESRSGICNVRPPGHHAEQD 593
Query: 167 NPSGFCYVNDIVLAIVNLLRYH--PRVLYIDIDLHHGDGVQEAFYTTDRVFTVSFHKY-N 223
+P GFC N++ +A +R RVL +D D+HHG+G Q F + +V +S H+Y +
Sbjct: 594 HPHGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEH 653
Query: 224 GEFFP--GTGDLDEIGCSRGKHFALNVPL-QDGIEDDSYINLFKSIIDPVITSFRPSVII 280
G FFP G+ D +G G+ F +N+P + G+ D Y F+ +I P+ F P +++
Sbjct: 654 GSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVL 713
Query: 281 QQCGADSLGHDRLGCFNLNIKAHGECVRFVKSFGVPMLVVG-GGGYTPRNVSRLWTYETG 339
G D+ D LG + + +G ++ + ++V GGY ++S T T
Sbjct: 714 VSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALASGRIIVCLEGGYNVNSISYAMTMCTK 773
Query: 340 LLNG 343
L G
Sbjct: 774 TLLG 777
Score = 107 bits (266), Expect = 5e-23
Identities = 72/228 (31%), Positives = 119/228 (51%), Gaps = 16/228 (7%)
Query: 76 TRSATKDELTKFHSEDYVNFLAKVTPDTLNKLPRGSLEKFNIGDDCPIFQGMFDYAALYA 135
+RSATKDE+ + H+E++ L + + ++ ++ D I F+ + L +
Sbjct: 78 SRSATKDEILRLHTEEHFERLKETSGIRDDERMEELSSRY---DSIYIHPSTFELSLLAS 134
Query: 136 GASLDASRKLLNGQSE--IAINWSGGLHHAKKNNPSGFCYVNDIVLAIVNLLRYHP--RV 191
G++++ L+ G+++ +AI G HHA K +G+C+ N++ LA + L H R+
Sbjct: 135 GSTIELVDHLVAGKAQNGMAIIRPPG-HHAMKAEYNGYCFFNNVALATQHALDVHKLQRI 193
Query: 192 LYIDIDLHHGDGVQEAFYTTDRVFTVSFHKY-NGEFFP--GTGDLDEIGCSRGKHFALNV 248
L ID D+HHG G Q FY RV S H++ +G F+P D IG G + NV
Sbjct: 194 LIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFNV 253
Query: 249 PLQ-DGIEDDSYINLFKSIIDPVITSFRPSVIIQQCGADSLGHDRLGC 295
PL G+ + Y+ +F+ ++ PV F+P +II G D+ LGC
Sbjct: 254 PLNATGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDA----ALGC 297
>YNL021w [B] KOG1343 Histone deacetylase complex catalytic component HDA1
Length = 706
Score = 130 bits (327), Expect = 4e-30
Identities = 89/332 (26%), Positives = 166/332 (49%), Gaps = 28/332 (8%)
Query: 24 GTSYSPRVSYHFNSKVSQYHYGVKHPMKP------FRLMLTDHLVSAYGLHKVMDLYE-- 75
G Y R+ YH S + Y HP P ++++ + L++ L V DL +
Sbjct: 59 GLCYDVRMRYHAKIFTSYFEYIDPHPEDPRRIYRIYKILAENGLINDPTLSGVDDLGDLM 118
Query: 76 ----TRSATKDELTKFHSEDYVNFLAKVTPDTLNKLPRGSLEKFNIGDDCPIFQGMFDYA 131
R+AT +E+ + H+++++ F+ + +L L++ GD + A
Sbjct: 119 LKIPVRAATSEEILEVHTKEHLEFIESTEKMSREEL----LKETEKGDSVYFNNDSYASA 174
Query: 132 ALYAGASLDASRKLLNGQ--SEIAINWSGGLHHAKKNNPSGFCYVNDIVLAIVNLLRYHP 189
L G +++A + ++ G+ + +A+ G HHA+ GFC +++ +A N+L+ +P
Sbjct: 175 RLPCGGAIEACKAVVEGRVKNSLAVVRPPG-HHAEPQAAGGFCLFSNVAVAAKNILKNYP 233
Query: 190 ----RVLYIDIDLHHGDGVQEAFYTTDRVFTVSFHKYN-GEFFPGT--GDLDEIGCSRGK 242
R++ +D D+HHG+G Q++FY D+V VS H++ G+++PGT G D+ G +G+
Sbjct: 234 ESVRRIMILDWDIHHGNGTQKSFYQDDQVLYVSLHRFEMGKYYPGTIQGQYDQTGEGKGE 293
Query: 243 HFALNVPLQ-DGIEDDSYINLFKSIIDPVITSFRPSVIIQQCGADSLGHDRLGCFNLNIK 301
F N+ G+ D Y+ F+ ++ P+ F+P ++I G D+ D +G ++
Sbjct: 294 GFNCNITWPVGGVGDAEYMWAFEQVVMPMGREFKPDLVIISSGFDAADGDTIGQCHVTPS 353
Query: 302 AHGECVRFVKSFGVPML-VVGGGGYTPRNVSR 332
+G +KS L VV GGY ++R
Sbjct: 354 CYGHMTHMLKSLARGNLCVVLEGGYNLDAIAR 385
>SPBC800.03 [B] KOG1343 Histone deacetylase complex catalytic component HDA1
Length = 687
Score = 116 bits (290), Expect = 8e-26
Identities = 93/327 (28%), Positives = 151/327 (45%), Gaps = 30/327 (9%)
Query: 24 GTSYSPRVSYHFN-SKVSQYHYGVKHPMKPFRLMLTDHLVSAYG----LHKVMDLY---E 75
G Y PR+ +H S+V HP P R++ + G + D++
Sbjct: 58 GLCYDPRMRFHATLSEVDD------HPEDPRRVLRVFEAIKKAGYVSNVPSPSDVFLRIP 111
Query: 76 TRSATKDELTKFHSEDYVNFLAKVTPDTLNKLPRGSLEKFNIGDDCPIFQGMFDYAALYA 135
R AT +EL + HS++ + + + ++ +LEK I D A L
Sbjct: 112 AREATLEELLQVHSQEMYDRVTNT--EKMSHEDLANLEK--ISDSLYYNNESAFCARLAC 167
Query: 136 GASLDASRKLLNGQ--SEIAINWSGGLHHAKKNNPSGFCYVNDIVLAIVNLLRYHP---- 189
G++++ ++ GQ + A+ G HHA+ + P GFC N++ + ++L+ P
Sbjct: 168 GSAIETCTAVVTGQVKNAFAVVRPPG-HHAEPHKPGGFCLFNNVSVTARSMLQRFPDKIK 226
Query: 190 RVLYIDIDLHHGDGVQEAFYTTDRVFTVSFHKY-NGEFFPGT--GDLDEIGCSRGKHFAL 246
RVL +D D+HHG+G Q AFY V VS H+Y NG F+PGT G + G G +
Sbjct: 227 RVLIVDWDIHHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNYGCAENCGEGPGLGRTV 286
Query: 247 NVPLQ-DGIEDDSYINLFKSIIDPVITSFRPSVIIQQCGADSLGHDRLGCFNLNIKAHGE 305
N+P G+ D YI F+ ++ PV F P ++I CG D+ D +G F L A+
Sbjct: 287 NIPWSCAGMGDGDYIYAFQRVVMPVAYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAAYAH 346
Query: 306 CVRFVKSFGVPMLVVG-GGGYTPRNVS 331
+ + + + GGY ++S
Sbjct: 347 MTQMLMGLADGKVFISLEGGYNLDSIS 373
>At3g18520 [B] KOG1343 Histone deacetylase complex catalytic component HDA1
Length = 561
Score = 115 bits (288), Expect = 1e-25
Identities = 91/311 (29%), Positives = 145/311 (46%), Gaps = 18/311 (5%)
Query: 48 HPMKPFRLMLTDHLVSAYGLHKVMDL-YETRSATKDELTKFHSEDYVNFLAKVTPDTLNK 106
HP +P RL ++ G+ L R TK EL H+ ++V+ + DT ++
Sbjct: 180 HPERPDRLRAIAASLATAGVFPGRCLPINAREITKQELQMVHTSEHVDAV-----DTTSQ 234
Query: 107 LPRGSLEKFNIGDDCPIFQGMFDYAALYAGASLDASRKLLNGQSE--IAINWSGGLHHAK 164
L ++ A L AG D + + G+ + A+ G HHA
Sbjct: 235 LLYSYFTSDTYANEYSARA-----ARLAAGLCADLATDIFTGRVKNGFALVRPPG-HHAG 288
Query: 165 KNNPSGFCYVNDI-VLAIVNLLRYHPRVLYIDIDLHHGDGVQEAFYTTDRVFTVSFHKY- 222
+ GFC N+ V A+V +VL +D D+HHG+G QE F V +S H++
Sbjct: 289 VRHAMGFCLHNNAAVAALVAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHE 348
Query: 223 NGEFFPGTGDLDEIGCSRGKHFALNVPLQ-DGIEDDSYINLFKSIIDPVITSFRPSVIIQ 281
G F+PGTG DE+G + G+ + +NVP G+ D YI F+ ++ P+ ++F P +I
Sbjct: 349 GGNFYPGTGAADEVGSNGGEGYCVNVPWSCGGVGDKDYIFAFQHVVLPIASAFSPDFVII 408
Query: 282 QCGADSLGHDRLGCFNLNIKAHGECVRFVKSF-GVPMLVVGGGGYTPRNVSRLWTYETGL 340
G D+ D LGC ++ + + + G MLV+ GGY R++S T +
Sbjct: 409 SAGFDAARGDPLGCCDVTPAGYSRMTQMLGDLCGGKMLVILEGGYNLRSISASATAVIKV 468
Query: 341 LNGVLLQPKLP 351
L G + +LP
Sbjct: 469 LLGENPENELP 479
>At1g08460 [B] KOG1343 Histone deacetylase complex catalytic component HDA1
Length = 377
Score = 111 bits (277), Expect = 3e-24
Identities = 90/288 (31%), Positives = 139/288 (48%), Gaps = 32/288 (11%)
Query: 79 ATKDELTKFHSEDYVNFLAKVTPDTLNKLPRGSLEKFNIGDDCPIFQGMFDYAALYAGAS 138
A EL FH+ +Y+ L + S E+ I + G ++ A L AG +
Sbjct: 70 AIVSELLMFHTSEYIEKLVEADK---------SGERCEIAAGTFMSPGSWEAALLAAGTT 120
Query: 139 LDASRKLLNGQSEIA---INWSGGLHHAKKNNPSGFCYVNDIVLAIVNLLRYHP--RVLY 193
L A + +L+ +IA + G HH++ G+C++N+ LA+ L RV
Sbjct: 121 LSAMQHILDCHGKIAYALVRPPG--HHSQPTQADGYCFLNNAALAVKLALNSGSCSRVAV 178
Query: 194 IDIDLHHGDGVQEAFYTTDRVFTVSFHKYNGEF---FPGTGDLDEIGCSRGKHFALNVPL 250
IDID+H+G+G E FYT+D+V TVS H +G + P G +DE+G G + LNVPL
Sbjct: 179 IDIDVHYGNGTAEGFYTSDKVLTVSLHMNHGSWGSSHPQKGSIDELGEDVGLGYNLNVPL 238
Query: 251 QDGIEDDSYINLFKSIIDPVITSFRPSVIIQQCGADSLGHDRLGCFNLNIKAH---GECV 307
+G D Y ++ P + F P +++ G DS D G +L + + G+ +
Sbjct: 239 PNGTGDRGYEYAMNELVVPAVRRFGPDMVVLVVGQDSSAFDPNGRQSLTMNGYRRIGQIM 298
Query: 308 RFV---KSFGVPMLVVGGGGYTPRNVSRLWTYETGLLNGVLLQPKLPE 352
R V S G +L+V GGY +V+ +L GVL K+PE
Sbjct: 299 RGVAEEHSHG-RLLMVQEGGY---HVTYAAYCLHAMLEGVL---KIPE 339
>Hs5174481 [B] KOG1343 Histone deacetylase complex catalytic component HDA1
Length = 1084
Score = 109 bits (273), Expect = 7e-24
Identities = 85/283 (30%), Positives = 135/283 (47%), Gaps = 29/283 (10%)
Query: 48 HPMKPFRLMLTDHLVSAYGLHKVMDLYETRSATKDELTKFHSEDYVNFLAKVTPDTLNKL 107
HP R+ + GL + R AT +EL HSE + L P KL
Sbjct: 675 HPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHT-LLYGTNPLNRQKL 733
Query: 108 PR----GSLEKFNIGDDC--------PIFQGMFDYAA--LYAGASLDASRKLLNGQSE-- 151
GSL + C I+ + A L G ++ K+ G+ +
Sbjct: 734 DSKKLLGSLASVFVRLPCGGVGVDSDTIWNEVHSAGAARLAVGCVVELVFKVATGELKNG 793
Query: 152 IAINWSGGLHHAKKNNPSGFCYVNDIVLAIVNLLRYH---PRVLYIDIDLHHGDGVQEAF 208
A+ G HHA+++ P GFCY N + +A LL+ ++L +D D+HHG+G Q+AF
Sbjct: 794 FAVVRPPG-HHAEESTPMGFCYFNSVAVA-AKLLQQRLSVSKILIVDWDVHHGNGTQQAF 851
Query: 209 YTTDRVFTVSFHKY-NGEFFPGTGDLDEIGCSRGKHFALNVPLQDGIE----DDSYINLF 263
Y+ V +S H+Y +G FFPG+G DE+G G F +N+ G++ D Y+ F
Sbjct: 852 YSDPSVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAF 911
Query: 264 KSIIDPVITSFRPSVIIQQCGADSL-GHDR-LGCFNLNIKAHG 304
++++ P+ + F P V++ G D++ GH LG +NL+ + G
Sbjct: 912 RTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGYNLSARCFG 954
>CE08062 [B] KOG1343 Histone deacetylase complex catalytic component HDA1
Length = 796
Score = 108 bits (271), Expect = 1e-23
Identities = 82/278 (29%), Positives = 140/278 (49%), Gaps = 26/278 (9%)
Query: 77 RSATKDELTKFHSEDYVNFLAKVTPDTLNKLPRGSL--EKF------NIGDDCPIF---Q 125
+ A+ ++L HS+ Y F A V+P K+ SL ++F IG D +
Sbjct: 442 KKASLEQLQLVHSQTYTTFFA-VSPTACLKIDANSLPLKRFLQLPCGGIGVDSDTYFNDA 500
Query: 126 GMFDYAALYAGASLDASRKLLNGQSE---IAINWSGGLHHAKKNNPSGFCYVNDIVLAIV 182
A L AG ++ S ++ G+ + I G HHA+ GFC+ N++ +A+
Sbjct: 501 STQTAARLAAGTLIELSSQVAEGRLKNGFACIRPPG--HHAEHEQAMGFCFFNNVAVAVK 558
Query: 183 NLLRYHP----RVLYIDIDLHHGDGVQEAFYTTDRVFTVSFHKYN-GEFFPGTGDLDEIG 237
L +P ++ ID D+HHG+G Q +F V +S H+++ G FFPGTG + E+G
Sbjct: 559 VLQTKYPAQCAKIAIIDWDVHHGNGTQLSFENDPNVLYMSLHRHDKGNFFPGTGSVTEVG 618
Query: 238 CSRGKHFALNVPLQ-DGIEDDSYINLFKSIIDPVITSFRPSVIIQQCGADSL-GH-DRLG 294
+ K +NVP D + D Y+ ++++I+PV+ SF P II G D+ GH + LG
Sbjct: 619 KNDAKGLTVNVPFSGDVMRDPEYLAAWRTVIEPVMASFCPDFIIVSAGFDACHGHPNALG 678
Query: 295 CFNLNIKAHGECVRFVKSFGVPMLVVG-GGGYTPRNVS 331
+ + + G + + ++ +V+ GGY +++S
Sbjct: 679 GYEVTPEMFGYMTKSLLNYASGKVVLALEGGYDLKSIS 716
>Hs13259524 [B] KOG1343 Histone deacetylase complex catalytic component HDA1
Length = 912
Score = 108 bits (269), Expect = 2e-23
Identities = 87/308 (28%), Positives = 140/308 (45%), Gaps = 36/308 (11%)
Query: 47 KHPMKPFRLMLTDHLVSAYGLHKVMDLYETRSATKDELTKFHSEDYVNFLAKVTPDTLNK 106
+HP R+ + GL + R A+ +EL HSE +V L P + K
Sbjct: 500 RHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHV-LLYGTNPLSRLK 558
Query: 107 LPRGSLEKF------------NIGDDCPIFQGMF--DYAALYAGASLD------ASRKLL 146
L G L +G D AA +A S+ ASR+L
Sbjct: 559 LDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLAFKVASRELK 618
Query: 147 NGQSEIAINWSGGLHHAKKNNPSGFCYVNDIVLAIVNLLRYHP--RVLYIDIDLHHGDGV 204
NG A+ G HHA + GFC+ N + +A L + ++L +D D+HHG+G
Sbjct: 619 NG---FAVVRPPG-HHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGNGT 674
Query: 205 QEAFYTTDRVFTVSFHKY-NGEFFPGTGDLDEIGCSRGKHFALNVPLQDGIE----DDSY 259
Q+ FY V +S H++ +G FFPG+G +DE+G G+ F +NV G++ D Y
Sbjct: 675 QQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDPEY 734
Query: 260 INLFKSIIDPVITSFRPSVIIQQCGADSL-GHDR-LGCFNLNIKAHGECVRFVKSF--GV 315
+ F+ ++ P+ F P +++ G D+ GH LG ++++ K G + + + G
Sbjct: 735 LAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAGGA 794
Query: 316 PMLVVGGG 323
+L + GG
Sbjct: 795 VVLALEGG 802
>Hs13259522 [B] KOG1343 Histone deacetylase complex catalytic component HDA1
Length = 952
Score = 108 bits (269), Expect = 2e-23
Identities = 87/308 (28%), Positives = 140/308 (45%), Gaps = 36/308 (11%)
Query: 47 KHPMKPFRLMLTDHLVSAYGLHKVMDLYETRSATKDELTKFHSEDYVNFLAKVTPDTLNK 106
+HP R+ + GL + R A+ +EL HSE +V L P + K
Sbjct: 540 RHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHV-LLYGTNPLSRLK 598
Query: 107 LPRGSLEKF------------NIGDDCPIFQGMF--DYAALYAGASLD------ASRKLL 146
L G L +G D AA +A S+ ASR+L
Sbjct: 599 LDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLAFKVASRELK 658
Query: 147 NGQSEIAINWSGGLHHAKKNNPSGFCYVNDIVLAIVNLLRYHP--RVLYIDIDLHHGDGV 204
NG A+ G HHA + GFC+ N + +A L + ++L +D D+HHG+G
Sbjct: 659 NG---FAVVRPPG-HHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGNGT 714
Query: 205 QEAFYTTDRVFTVSFHKY-NGEFFPGTGDLDEIGCSRGKHFALNVPLQDGIE----DDSY 259
Q+ FY V +S H++ +G FFPG+G +DE+G G+ F +NV G++ D Y
Sbjct: 715 QQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDPEY 774
Query: 260 INLFKSIIDPVITSFRPSVIIQQCGADSL-GHDR-LGCFNLNIKAHGECVRFVKSF--GV 315
+ F+ ++ P+ F P +++ G D+ GH LG ++++ K G + + + G
Sbjct: 775 LAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAGGA 834
Query: 316 PMLVVGGG 323
+L + GG
Sbjct: 835 VVLALEGG 842
>Hs4885531 [B] KOG1343 Histone deacetylase complex catalytic component HDA1
Length = 1122
Score = 105 bits (262), Expect = 1e-22
Identities = 91/313 (29%), Positives = 139/313 (44%), Gaps = 48/313 (15%)
Query: 48 HPMKPFRLMLTDHLVSAYGLHKVMDLYETRSATKDELTKFHSEDYVNFLAKVTPDTLNKL 107
HP R+ + GL + R AT DE+ HSE Y L +P KL
Sbjct: 704 HPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSE-YHTLLYGTSPLNRQKL 762
Query: 108 PRGSLEKFNIGDDCPIFQGMFDYAALYAGA-------------SLDASRKLLNGQSEIAI 154
L +G PI Q M YA L G S A R + E+A
Sbjct: 763 DSKKL----LG---PISQKM--YAVLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLLELAF 813
Query: 155 NWSGGL------------HHAKKNNPSGFCYVNDIVLAIVNLLRYH---PRVLYIDIDLH 199
+ G HHA+++ GFC+ N + + LL+ +VL +D D+H
Sbjct: 814 KVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAIT-AKLLQQKLNVGKVLIVDWDIH 872
Query: 200 HGDGVQEAFYTTDRVFTVSFHKY-NGEFFPGTGDLDEIGCSRGKHFALNVPLQDGIE--- 255
HG+G Q+AFY V +S H+Y NG FFPG+G +E+G G + +NV G++
Sbjct: 873 HGNGTQQAFYNDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPI 932
Query: 256 -DDSYINLFKSIIDPVITSFRPSVIIQQCGADSL-GH-DRLGCFNLNIKAHGECVRFVKS 312
D Y+ F++++ P+ F P V++ G D++ GH LG +++ + G R + +
Sbjct: 933 GDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMT 992
Query: 313 F--GVPMLVVGGG 323
G +L + GG
Sbjct: 993 LAGGRVVLALEGG 1005
>7292853 [B] KOG1343 Histone deacetylase complex catalytic component HDA1
Length = 1235
Score = 102 bits (254), Expect = 1e-21
Identities = 85/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)
Query: 47 KHPMKPFRLMLTDHLVSAYGLHKVMDLYETRSATKDELTKFHSEDYVNFLA----KVTPD 102
+HP RL ++ L K D R AT++EL H+E + +++
Sbjct: 842 QHPEHSGRLQSVWARLNETDLVKRCDRLRARKATQEELQTVHTEAHAMLFGSNQCQLSRP 901
Query: 103 TLNKLPRGSLEKFNIG------DDCPIFQGMFDYAALYAGASLDASRKLLNG--QSEIAI 154
L S + + G D A + AG +D + K G ++ A+
Sbjct: 902 KLENTLSASFVRLSCGGLGVDLDTTWNEHHTATAARMAAGCVIDLALKTAKGDLRNGFAV 961
Query: 155 NWSGGLHHAKKNNPSGFCYVNDIVLAIVNLLRYHP---RVLYIDIDLHHGDGVQEAFYTT 211
G HHA+ N GFC+ N I +A L + P R+L +D D+HHG+G Q+AFY +
Sbjct: 962 VRPPG-HHAEANLAMGFCFFNSIAIAAKLLRQRMPEVRRILIVDWDVHHGNGTQQAFYQS 1020
Query: 212 DRVFTVSFHKY-NGEFFPGTGDLDEIGCSRGKHFALNV----PLQDGIEDDSYINLFKSI 266
+ +S H++ +G FFPGTG E G G F +N+ L + D YI F+++
Sbjct: 1021 PDILYLSIHRHDDGNFFPGTGGPTECGSGAGLGFNVNISWSGALNPPLGDAEYIAAFRTV 1080
Query: 267 IDPVITSFRPSVIIQQCGAD-SLGHDR-LGCFNLNIKAHGECVRFVKSF--GVPMLVVGG 322
+ P+ SF P +++ G D + GH LG ++++ G R + G +L + G
Sbjct: 1081 VMPIARSFNPDIVLVSSGFDAATGHPAPLGGYHVSPACFGFMTRELLQLANGKVVLALEG 1140
Query: 323 G 323
G
Sbjct: 1141 G 1141
>At3g44490 [B] KOG1342 Histone deacetylase complex catalytic component RPD3
Length = 158
Score = 102 bits (253), Expect = 2e-21
Identities = 52/113 (46%), Positives = 74/113 (65%), Gaps = 8/113 (7%)
Query: 296 FNLNIKAHGECVRFVKSFGVPMLVVGGGGYTPRNVSRLWTYETGLLNGVLLQPKLPEGIP 355
F++ H ECV+FVK F +P+LV GGGGYT NV+R WT ET G+LL +LP I
Sbjct: 3 FSMLFTGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVET----GILLDTELPNEIS 58
Query: 356 FRD---WFGPDYSLHPTLDDLYENKNSKKFLENIRIRCLENIKYLQGAPSVRM 405
D +F PD+SL + EN N+K ++ +I+++ LEN++Y+Q APSV+M
Sbjct: 59 ENDYIKYFAPDFSLKIPGGHI-ENLNTKSYISSIKVQILENLRYIQHAPSVQM 110
>Hs17158039 [B] KOG1343 Histone deacetylase complex catalytic component HDA1
Length = 1011
Score = 101 bits (252), Expect = 2e-21
Identities = 64/199 (32%), Positives = 107/199 (53%), Gaps = 17/199 (8%)
Query: 137 ASLDASRKLLNGQSEIAINWSGGLHHAKKNNPSGFCYVNDIVLAIVNLLRYH---PRVLY 193
AS AS +L NG A+ G HHA+++ GFC+ N + + LR ++L
Sbjct: 762 ASKVASGELKNG---FAVVRPPG-HHAEESTAMGFCFFNSVAIT-AKYLRDQLNISKILI 816
Query: 194 IDIDLHHGDGVQEAFYTTDRVFTVSFHKYN-GEFFPGTGDLDEIGCSRGKHFALNVPLQD 252
+D+D+HHG+G Q+AFY + +S H+Y+ G FFPG+G +E+G G+ + +N+
Sbjct: 817 VDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGSGAPNEVGTGLGEGYNINIAWTG 876
Query: 253 GIE----DDSYINLFKSIIDPVITSFRPSVIIQQCGADSL-GH-DRLGCFNLNIKAHGEC 306
G++ D Y+ F++I+ PV F P +++ G D+L GH LG + + K G
Sbjct: 877 GLDPPMGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEGHTPPLGGYKVTAKCFGHL 936
Query: 307 VRFVKSF--GVPMLVVGGG 323
+ + + G +L + GG
Sbjct: 937 TKQLMTLADGRVVLALEGG 955
>Hs21237799 [B] KOG1343 Histone deacetylase complex catalytic component HDA1
Length = 1037
Score = 100 bits (249), Expect = 4e-21
Identities = 57/175 (32%), Positives = 96/175 (54%), Gaps = 13/175 (7%)
Query: 161 HHAKKNNPSGFCYVNDIVLAIVNLLRYH---PRVLYIDIDLHHGDGVQEAFYTTDRVFTV 217
HHA+++ GFC+ N + + LL+ +VL +D D+HHG+G Q+AFY V +
Sbjct: 747 HHAEESTAMGFCFFNSVAIT-AKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYI 805
Query: 218 SFHKY-NGEFFPGTGDLDEIGCSRGKHFALNVPLQDGIE----DDSYINLFKSIIDPVIT 272
S H+Y NG FFPG+G +E+G G + +NV G++ D Y+ F++++ P+
Sbjct: 806 SLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAH 865
Query: 273 SFRPSVIIQQCGADSL-GH-DRLGCFNLNIKAHGECVRFVKSF--GVPMLVVGGG 323
F P V++ G D++ GH LG +++ + G R + + G +L + GG
Sbjct: 866 EFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGG 920
>CE25887 [B] KOG1343 Histone deacetylase complex catalytic component HDA1
Length = 955
Score = 95.1 bits (235), Expect = 2e-19
Identities = 80/296 (27%), Positives = 132/296 (44%), Gaps = 16/296 (5%)
Query: 48 HPMKPFRLMLTDHLVSAYG-LHKVMDLYETRSATKDELTKFHSEDYVNFLAKVTPDTLNK 106
HP KP R + G L K +D R AT +E+ H++ + L +
Sbjct: 446 HPEKPARTRRILKTLRESGVLEKCVDRNCERIATNEEIRLVHTKKMLEHLRTTETMKDEE 505
Query: 107 LPRGSLEKFNIGDDCPIFQGMFDYAALYAGASLDASRKLLN---GQSEIAINWSGGLHHA 163
L + ++FN + + A GA L + ++ GQ + HHA
Sbjct: 506 LMEEAEKEFN---SIYLTRDTLKVARKAVGAVLQSVDEIFEKDAGQRNALVIVRPPGHHA 562
Query: 164 KKNNPSGFCYVNDIVLAIVNLLRYHP--RVLYIDIDLHHGDGVQEAFYTTDRVFTVSFHK 221
+ SGFC N++ +A R H RVL +D D+HHG+G QE FY V +S H+
Sbjct: 563 SASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGTQEIFYEDSNVMYMSIHR 622
Query: 222 YN-GEFFP--GTGDLDEIGCSRGKHFALNVPLQDGIE--DDSYINLFKSIIDPVITSFRP 276
++ G F+P D ++G G+ ++NVP G++ D+ Y F+ +I P+ F P
Sbjct: 623 HDKGNFYPIGEPKDYSDVGEGAGEGMSVNVPF-SGVQMGDNEYQMAFQRVIMPIAYQFNP 681
Query: 277 SVIIQQCGADSLGHDRLGCFNLNIKAHGECVRFVKSF-GVPMLVVGGGGYTPRNVS 331
+++ G D+ D LG + + + + S G ++ V GGY ++S
Sbjct: 682 DLVLISAGFDAAVDDPLGEYKVTPETFALMTYQLSSLAGGRIITVLEGGYNLTSIS 737
Score = 90.5 bits (223), Expect = 5e-18
Identities = 58/171 (33%), Positives = 84/171 (48%), Gaps = 6/171 (3%)
Query: 161 HHAKKNNPSGFCYVNDIVLAIVN-LLRYHPRVLYIDIDLHHGDGVQEAFYTTDRVFTVSF 219
HHA +P GFC N++ A R+L +D+D+HHG G Q FY RV S
Sbjct: 145 HHADSVSPCGFCLFNNVAQAAEEAFFSGAERILIVDLDVHHGHGTQRIFYDDKRVLYFSI 204
Query: 220 HKY-NGEFFP--GTGDLDEIGCSRGKHFALNVPLQD-GIEDDSYINLFKSIIDPVITSFR 275
H++ +G F+P D D IG +G + N+ L + G D Y+++ ++ P+ T F
Sbjct: 205 HRHEHGLFWPHLPESDFDHIGSGKGLGYNANLALNETGCTDSDYLSIIFHVLLPLATQFD 264
Query: 276 PSVIIQQCGADSLGHDRLGCFNLNIKAHGECVRFVKSFGV-PMLVVGGGGY 325
P +I G D+L D LG L + + +KS MLVV GGY
Sbjct: 265 PHFVIISAGFDALLGDPLGGMCLTPDGYSHILYHLKSLAQGRMLVVLEGGY 315
>CE20772 [B] KOG1343 Histone deacetylase complex catalytic component HDA1
Length = 863
Score = 95.1 bits (235), Expect = 2e-19
Identities = 80/296 (27%), Positives = 132/296 (44%), Gaps = 16/296 (5%)
Query: 48 HPMKPFRLMLTDHLVSAYG-LHKVMDLYETRSATKDELTKFHSEDYVNFLAKVTPDTLNK 106
HP KP R + G L K +D R AT +E+ H++ + L +
Sbjct: 446 HPEKPARTRRILKTLRESGVLEKCVDRNCERIATNEEIRLVHTKKMLEHLRTTETMKDEE 505
Query: 107 LPRGSLEKFNIGDDCPIFQGMFDYAALYAGASLDASRKLLN---GQSEIAINWSGGLHHA 163
L + ++FN + + A GA L + ++ GQ + HHA
Sbjct: 506 LMEEAEKEFN---SIYLTRDTLKVARKAVGAVLQSVDEIFEKDAGQRNALVIVRPPGHHA 562
Query: 164 KKNNPSGFCYVNDIVLAIVNLLRYHP--RVLYIDIDLHHGDGVQEAFYTTDRVFTVSFHK 221
+ SGFC N++ +A R H RVL +D D+HHG+G QE FY V +S H+
Sbjct: 563 SASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGTQEIFYEDSNVMYMSIHR 622
Query: 222 YN-GEFFP--GTGDLDEIGCSRGKHFALNVPLQDGIE--DDSYINLFKSIIDPVITSFRP 276
++ G F+P D ++G G+ ++NVP G++ D+ Y F+ +I P+ F P
Sbjct: 623 HDKGNFYPIGEPKDYSDVGEGAGEGMSVNVPF-SGVQMGDNEYQMAFQRVIMPIAYQFNP 681
Query: 277 SVIIQQCGADSLGHDRLGCFNLNIKAHGECVRFVKSF-GVPMLVVGGGGYTPRNVS 331
+++ G D+ D LG + + + + S G ++ V GGY ++S
Sbjct: 682 DLVLISAGFDAAVDDPLGEYKVTPETFALMTYQLSSLAGGRIITVLEGGYNLTSIS 737
Score = 90.5 bits (223), Expect = 5e-18
Identities = 58/171 (33%), Positives = 84/171 (48%), Gaps = 6/171 (3%)
Query: 161 HHAKKNNPSGFCYVNDIVLAIVN-LLRYHPRVLYIDIDLHHGDGVQEAFYTTDRVFTVSF 219
HHA +P GFC N++ A R+L +D+D+HHG G Q FY RV S
Sbjct: 145 HHADSVSPCGFCLFNNVAQAAEEAFFSGAERILIVDLDVHHGHGTQRIFYDDKRVLYFSI 204
Query: 220 HKY-NGEFFP--GTGDLDEIGCSRGKHFALNVPLQD-GIEDDSYINLFKSIIDPVITSFR 275
H++ +G F+P D D IG +G + N+ L + G D Y+++ ++ P+ T F
Sbjct: 205 HRHEHGLFWPHLPESDFDHIGSGKGLGYNANLALNETGCTDSDYLSIIFHVLLPLATQFD 264
Query: 276 PSVIIQQCGADSLGHDRLGCFNLNIKAHGECVRFVKSFGV-PMLVVGGGGY 325
P +I G D+L D LG L + + +KS MLVV GGY
Sbjct: 265 PHFVIISAGFDALLGDPLGGMCLTPDGYSHILYHLKSLAQGRMLVVLEGGY 315
>Hs20070354 [B] KOG1343 Histone deacetylase complex catalytic component HDA1
Length = 669
Score = 91.7 bits (226), Expect = 2e-18
Identities = 76/265 (28%), Positives = 124/265 (46%), Gaps = 19/265 (7%)
Query: 51 KPFRLMLTDHLVSAYGLHKVMDLYETRSATKDELTKFHSEDYVNFLAKVTPDTLNKLPRG 110
+P RL + GL + R A+++EL HS +YV+ + + L +
Sbjct: 27 RPERLTAALDRLRQRGLEQRCLRLSAREASEEELGLVHSPEYVSLVRET-----QVLGKE 81
Query: 111 SLEKFNIGDDCPIFQ-GMFDYAALYAGASLDASRKLLNG--QSEIAINWSGGLHHAKKNN 167
L+ + D F F A L AGA L +L G Q+ +A+ G HH ++
Sbjct: 82 ELQALSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGAVQNGLALVRPPG-HHGQRAA 140
Query: 168 PSGFCYVNDIVLAIVNLLRYHP--RVLYIDIDLHHGDGVQEAFYTTDRVFTVSFHKY-NG 224
+GFC N++ +A + + H R+L +D D+HHG G+Q F V S+H+Y +G
Sbjct: 141 ANGFCVFNNVAIAAAHAKQKHGLHRILVVDWDVHHGQGIQYLFEDDPSVLYFSWHRYEHG 200
Query: 225 EFFP--GTGDLDEIGCSRGKHFALNVPL-QDGIEDDSYINLFKSIIDPVITSFRPSVIIQ 281
F+P D D +G +G F +N+P Q G+ + Y+ F ++ P+ F P +++
Sbjct: 201 RFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADYVAAFLHLLLPLAFEFDPELVLV 260
Query: 282 QCGADSLGHDRLGCFNLNIKAHGEC 306
G DS D G ++A EC
Sbjct: 261 SAGFDSAIGDPEG----QMQATPEC 281
>Hs13128864 [B] KOG1343 Histone deacetylase complex catalytic component HDA1
Length = 1215
Score = 90.9 bits (224), Expect = 4e-18
Identities = 85/325 (26%), Positives = 139/325 (42%), Gaps = 21/325 (6%)
Query: 17 PLFDCDFGTSYSPRVSYHFNSKVSQYHYGVKHPMKPFRLMLTDHLVSAYGLHKVMDLYET 76
P+ G Y + H N S HP P R++ + GL
Sbjct: 475 PVLQSRTGLVYDQNMMNHCNLWDSH------HPEVPQRILRIMCRLEELGLAGRCLTLTP 528
Query: 77 RSATKDELTKFHSEDYVNFLAKVTPDTLNKLPRGSLEKFNIGDDCPIFQGMFDYAALYAG 136
R AT+ EL HS +YV L +L R S F+ CP F A L G
Sbjct: 529 RPATEAELLTCHSAEYVGHLRATEKMKTRELHRES-SNFDSIYICP---STFACAQLATG 584
Query: 137 ASLDASRKLLNGQ--SEIAINWSGGLHHAKKNNPSGFCYVNDIVLAIVN---LLRYHPRV 191
A+ +L+G+ + A+ G HHA+++ GFC+ N + +A + + + R+
Sbjct: 585 AACRLVEAVLSGEVLNGAAVVRPPG-HHAEQDAACGFCFFNSVAVAARHAQTISGHALRI 643
Query: 192 LYIDIDLHHGDGVQEAFYTTDRVFTVSFHKY-NGEFFP--GTGDLDEIGCSRGKHFALNV 248
L +D D+HHG+G Q F V VS H+Y +G FFP G +IG + G F +NV
Sbjct: 644 LIVDWDVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNV 703
Query: 249 PLQ-DGIEDDSYINLFKSIIDPVITSFRPSVIIQQCGADSLGHDRLGCFNLNIKAHGECV 307
+ D Y+ + ++ P+ F P +++ G D+ D LG ++ + +
Sbjct: 704 AWNGPRMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLT 763
Query: 308 RFVKSFGV-PMLVVGGGGYTPRNVS 331
+ ++++ GGY ++S
Sbjct: 764 HLLMGLASGRIILILEGGYNLTSIS 788
Score = 85.5 bits (210), Expect = 1e-16
Identities = 73/270 (27%), Positives = 122/270 (45%), Gaps = 17/270 (6%)
Query: 36 NSKVSQYH--YGVKHPMKPFRLMLTDHLVSAYGLHKVMDLYETRSATKDELTKFHSEDYV 93
+ +++++H + P P RL + GL ++ R A K+EL HS +Y+
Sbjct: 91 DEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVHSLEYI 150
Query: 94 NFLAKVTPDTLNKLPRGSLEKF-NIGDDCPIFQGMFDYAALYAGASLDASRKLLNGQ--S 150
+ + +T + G L + D + + A L +G+ L +L + +
Sbjct: 151 DLM-----ETTQYMNEGELRVLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIRN 205
Query: 151 EIAINWSGGLHHAKKNNPSGFCYVNDIVLAIVNLLRYHP--RVLYIDIDLHHGDGVQEAF 208
+AI G HHA+ + G+C N + +A + H RVL +D D+HHG G Q F
Sbjct: 206 GMAIIRPPG-HHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQFTF 264
Query: 209 YTTDRVFTVSFHKY-NGEFFP--GTGDLDEIGCSRGKHFALNVPL-QDGIEDDSYINLFK 264
V S H+Y G F+P + G +G+ + +NVP Q G+ D YI F
Sbjct: 265 DQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFL 324
Query: 265 SIIDPVITSFRPSVIIQQCGADSLGHDRLG 294
++ PV F+P +++ G D+L D G
Sbjct: 325 HVLLPVALEFQPQLVLVAAGFDALQGDPKG 354
>At4g33470 [B] KOG1343 Histone deacetylase complex catalytic component HDA1
Length = 359
Score = 88.6 bits (218), Expect = 2e-17
Identities = 55/180 (30%), Positives = 84/180 (46%), Gaps = 13/180 (7%)
Query: 161 HHAKKNNPSGFCYVNDIVLAIVNLLRYH--PRVLYIDIDLHHGDGVQEAFYTTDRVFTVS 218
HHA P GFC ++ +A + R H R+ ID D+HHG+G +AF +F +S
Sbjct: 137 HHAVPKGPMGFCVFGNVAIAARHAQRTHGLKRIFIIDFDVHHGNGTNDAFTEDPDIFFLS 196
Query: 219 FHKYNGEFFPGTGDLDEIGCSRGKHFALNVPLQDGIEDDSYINLFKSIIDPVITSFRPSV 278
H+ +PGTG + +IG +G+ LN+PL G D + +F+ II P F+P +
Sbjct: 197 THQDGS--YPGTGKISDIGKGKGEGTTLNLPLPGGSGDIAMRTVFEEIIVPCAQRFKPDI 254
Query: 279 IIQQCGADSLGHDRLGCFNLNIKAHGECVRFVKSFGVPMLVVGG-------GGYTPRNVS 331
I+ G D+ D L + + +K V GG GGY ++S
Sbjct: 255 ILVSAGYDAHVLDPLANLQFTTATYYSLAKDIKRLAKE--VCGGRCVFFLEGGYNLESLS 312
>CE24411 [B] KOG1343 Histone deacetylase complex catalytic component HDA1
Length = 517
Score = 87.4 bits (215), Expect = 4e-17
Identities = 69/254 (27%), Positives = 116/254 (45%), Gaps = 13/254 (5%)
Query: 77 RSATKDELTKFHSEDYVNFLAKVTPDTLNKLPRGSLEKFNIGDDCPIFQGMFDYAALYAG 136
R A + E+ H++ YV+ + T+ + K+ +D + + A L AG
Sbjct: 57 REAEESEILAVHTKRYVDDVKSTETMTVEQ-QESFCTKY---EDIYVNSATWHRAKLAAG 112
Query: 137 ASLDASRKLLNGQSE-IAINWSGGLHHAKKNNPSGFCYVNDIVLAIVNLLRYHPRVLYID 195
AS+D ++ + IA G HHA + GFC N++ +A ++ +VL +D
Sbjct: 113 ASIDLMTSVMAAKRPGIAFIRPPG-HHAMPDEGCGFCIFNNVAIAAKAAIQNGQKVLIVD 171
Query: 196 IDLHHGDGVQEAF--YTTDRVFTVSFHKY-NGEFFPGTGDLDEIGCSRGKHFALNVPLQD 252
D+H G+G QE V +S H+Y NG F+P ++ + G +N+PL
Sbjct: 172 YDVHAGNGTQECVEQMGEGNVQLISIHRYENGHFWP---NMPQTGIYHNYKNTINLPLNT 228
Query: 253 -GIEDDSYINLFKSIIDPVITSFRPSVIIQQCGADSLGHDRLGCFNLNIKAHGECVRFVK 311
G+ D Y LF II P I +F+P +++ G D+ D G + +R +
Sbjct: 229 IGLTDADYHALFTHIILPTIHAFQPDLLLVSSGFDASIGDPEGSMQVTPAGFATMIRMLI 288
Query: 312 SFGVPMLVVGGGGY 325
G+P+ + GGY
Sbjct: 289 DTGIPVAALLEGGY 302
>Hs13376228 [B] KOG1344 Predicted histone deacetylase
Length = 347
Score = 82.4 bits (202), Expect = 1e-15
Identities = 62/206 (30%), Positives = 87/206 (42%), Gaps = 16/206 (7%)
Query: 153 AINWSGGLHHAKKNNPSGFCYVNDIVLAIVNLLRYHP---RVLYIDIDLHHGDGVQEAFY 209
AIN GG HH + GFC DI LAI L R ID+D H G+G + F
Sbjct: 134 AINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFM 193
Query: 210 TTDRVFTVSFHKYNGEFFPGTGDLDEIGCSRGKHFALNVPLQDGIEDDSYINLFKSIIDP 269
RV+ + YN +PG + V L+ G EDD Y++ + I
Sbjct: 194 DDKRVYIMDV--YNRHIYPGDRFAKQA-------IRRKVELEWGTEDDEYLDKVERNIKK 244
Query: 270 VITSFRPSVIIQQCGADSLGHDRLGCFNLN----IKAHGECVRFVKSFGVPMLVVGGGGY 325
+ P V++ G D L DRLG +++ +K R V+ VP+L+V GGY
Sbjct: 245 SLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDELVFRMVRGRRVPILMVTSGGY 304
Query: 326 TPRNVSRLWTYETGLLNGVLLQPKLP 351
R + L L+ P+ P
Sbjct: 305 QKRTARIIADSILNLFGLGLIGPESP 330
>7301219 [B] KOG1344 Predicted histone deacetylase
Length = 343
Score = 82.4 bits (202), Expect = 1e-15
Identities = 73/263 (27%), Positives = 110/263 (41%), Gaps = 29/263 (11%)
Query: 74 YETRSATKDELTKFHSEDYVNFLAKVTPDTLNKLPRGSLEKFNIGDDCPIFQGMFDYAAL 133
YE TKD+L + H+ +Y+ L ++N + + I +
Sbjct: 77 YEPTELTKDQLRRIHTREYLKSLRW----SMNVACIAEVPLMAFVPNRYIQRSYLRPMRF 132
Query: 134 YAGASLDASRKLLNGQSEIAINWSGGLHHAKKNNPSGFCYVNDIVLAIVNLLRYHP---- 189
A S+ A + L+ AIN GG HH GFC DI L IV L P
Sbjct: 133 QAAGSILAGKLALD--YGWAINLGGGFHHCCSYRGGGFCPYADISLLIVRLFEQEPFRVR 190
Query: 190 RVLYIDIDLHHGDGVQEAFYTTDRVFTVSFHKYNGEFFPGTGDLDE-IGCSRGKHFALNV 248
R++ +D+D H G+G + F V+ F YN +P E I C+ V
Sbjct: 191 RIMIVDLDAHQGNGHERDFNNVAAVYI--FDMYNAFVYPRDHVAKESIRCA--------V 240
Query: 249 PLQDGIEDDSYINLFKSIIDPVITSFRPSVIIQQCGADSLGHDRLGCFNLNIKAHGECVR 308
L++ ED Y+ K + + FRP +++ G D L D LG NL I A G R
Sbjct: 241 ELRNYTEDGFYLRQLKRCLMQSLAEFRPDMVVYNAGTDVLEGDPLG--NLAISAEGVIER 298
Query: 309 ------FVKSFGVPMLVVGGGGY 325
++ G+P++++ GGY
Sbjct: 299 DRLVFSTFRALGIPVVMLLSGGY 321
>At5g61060 [B] KOG1343 Histone deacetylase complex catalytic component HDA1
Length = 717
Score = 80.1 bits (196), Expect = 6e-15
Identities = 72/276 (26%), Positives = 117/276 (42%), Gaps = 37/276 (13%)
Query: 45 GVKHPMKPFRLMLTDHLVSAYGLHKVMDLYETRSATKDELTKFHSEDYVNFLAKVTPDTL 104
G HP P R+ + + G+ + + + A L H++D+VN + ++
Sbjct: 43 GEDHPECPDRIRVIWEKLQLAGVSQRCVVLGSSKAEDKHLQLVHTKDHVNLVKSISTKQK 102
Query: 105 NKLPRGSLEKFNIGDDCPIFQGMFDYAALYAGASLDASRKLLNGQSE--IAINWSGGLHH 162
+ + N + G + A L AG+ + + K+ G+ + AI G HH
Sbjct: 103 DYRRNRIASQLN---SIYLNGGSSEAAYLAAGSVVKLAEKVAEGELDCGFAIVRPPG-HH 158
Query: 163 AKKNNPSGFCYVNDIVLAIVNLLRYHP-----RVLYIDIDLHHGDGVQEAFY-------- 209
A+ + GFC N++ +A LL P ++L +D D+HHG+G Q+ F+
Sbjct: 159 AEADEAMGFCLFNNVAVAASFLLNERPDLGVKKILIVDWDVHHGNGTQKMFWKDPREPTF 218
Query: 210 -------------TTDRVFTVSFHKYNGEFFPG--TGDLDEIGCSRGKHFALNVPLQDG- 253
T F V H+Y G F+P GD + +G G+ F +NVP G
Sbjct: 219 YSITPLLDFYAWKVTGNAFLVR-HEYGG-FYPAGDDGDYNMVGEGPGEGFNINVPWDQGR 276
Query: 254 IEDDSYINLFKSIIDPVITSFRPSVIIQQCGADSLG 289
D Y+ + I+ PV F P VI G D+ G
Sbjct: 277 CGDADYLAAWDHILIPVAREFNPDVIFLSAGFDAGG 312
>At3g44660 [B] KOG1342 Histone deacetylase complex catalytic component RPD3
Length = 142
Score = 72.8 bits (177), Expect = 1e-12
Identities = 39/86 (45%), Positives = 56/86 (64%), Gaps = 8/86 (9%)
Query: 323 GGYTPRNVSRLWTYETGLLNGVLLQPKLPEGIPFRDW---FGPDYSLHPTLDDLYENKNS 379
GGYT NV+R WT ETG +LL +LP IP D+ F PD+SL + EN N+
Sbjct: 14 GGYTKENVARCWTVETG----ILLDTELPNEIPENDYIKYFAPDFSLKIPGGHI-ENLNT 68
Query: 380 KKFLENIRIRCLENIKYLQGAPSVRM 405
K ++ +I+++ LEN++Y+Q APSV+M
Sbjct: 69 KSYISSIKVQILENLRYIQHAPSVQM 94
>CE20787 [B] KOG1343 Histone deacetylase complex catalytic component HDA1
Length = 782
Score = 71.2 bits (173), Expect = 3e-12
Identities = 56/202 (27%), Positives = 95/202 (46%), Gaps = 11/202 (5%)
Query: 161 HHAKKNNPSGFCYVNDIVLAIVNLLRYHP--RVLYIDIDLHHGDGVQEAFYTTDRVFTVS 218
HH+ G+C N++ +A + +V +D D H G+G ++ R+ S
Sbjct: 407 HHSYGKVAQGYCIFNNVAIAAKYAIEKLEVKKVAIVDFDYHAGNGTYQSVKDESRIHLTS 466
Query: 219 FHKYN-GEFFPGTGDLDEIGCSRGKHFALNVPLQDGIEDDS-YINLFKSIIDPVITSFRP 276
FH ++ G F+P + D D S+ F VPL + + Y+++F ++ P++ F+P
Sbjct: 467 FHGHHFGAFWPFSRDYDYATNSQNTLF---VPLNGTMNSEGDYVSVFHHVLLPMLEQFQP 523
Query: 277 SVIIQQCGADSLGHDRLGCFNLNIKAH--GECVRFVKSF-GVPMLVVGGGGYTPRNVSRL 333
+I+ G DS +D + F +KAH G R + +L + GGY P N +
Sbjct: 524 ELILISAGFDSGYYDVMMEFGQGVKAHGYGHMARLLSQICPGKILAILEGGYHPYNYTES 583
Query: 334 WTYET-GLLNGVLLQPKLPEGI 354
+ GLLN L + +PE I
Sbjct: 584 ASMMVRGLLNLPLPRLDIPERI 605
>Hs17158041 [B] KOG1343 Histone deacetylase complex catalytic component HDA1
Length = 879
Score = 68.9 bits (167), Expect = 1e-11
Identities = 39/104 (37%), Positives = 61/104 (58%), Gaps = 9/104 (8%)
Query: 137 ASLDASRKLLNGQSEIAINWSGGLHHAKKNNPSGFCYVNDIVLAIVNLLRYH---PRVLY 193
AS AS +L NG A+ G HHA+++ GFC+ N + + LR ++L
Sbjct: 762 ASKVASGELKNG---FAVVRPPG-HHAEESTAMGFCFFNSVAIT-AKYLRDQLNISKILI 816
Query: 194 IDIDLHHGDGVQEAFYTTDRVFTVSFHKYN-GEFFPGTGDLDEI 236
+D+D+HHG+G Q+AFY + +S H+Y+ G FFPG+G +E+
Sbjct: 817 VDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGSGAPNEV 860
>At5g26040 [B] KOG1344 Predicted histone deacetylase
Length = 316
Score = 62.4 bits (150), Expect = 1e-09
Identities = 53/185 (28%), Positives = 78/185 (41%), Gaps = 28/185 (15%)
Query: 153 AINWSGGLHHAKKNNPSGFCYVNDIVLAI-VNLLRYH-PRVLYIDIDLHHGDGVQEAFYT 210
AIN GG HH GFC DI L I LR RV+ ID+D H G+G E
Sbjct: 122 AINIGGGFHHCTAERGGGFCAFADISLCIHFAFLRLRISRVMIIDLDAHQGNG-HETDLG 180
Query: 211 TDRVFTVSFHKYNGEFFPGTGDLDEIGC-----SRGKHFA-LNVPLQDGIEDDSYINLFK 264
D + ++F E+ C R + F V + G D Y+
Sbjct: 181 DDILSMLAF---------------EVRCIFLQDYRARRFIDQKVEVMSGTTTDEYLRKLD 225
Query: 265 SIIDPVITSFRPSVIIQQCGADSLGHDRLGCFNLN---IKAHGECV-RFVKSFGVPMLVV 320
++ +F+P ++I G D L D LG ++ I + E V RF + +P++++
Sbjct: 226 EALEVASRNFQPELVIYNAGTDILDGDPLGLLKISPDGITSRDEKVFRFAREKNIPLVML 285
Query: 321 GGGGY 325
GGY
Sbjct: 286 TSGGY 290
>At5g61070 [B] KOG1343 Histone deacetylase complex catalytic component HDA1
Length = 714
Score = 61.2 bits (147), Expect = 3e-09
Identities = 66/267 (24%), Positives = 106/267 (38%), Gaps = 64/267 (23%)
Query: 79 ATKDELTKFHSEDYVNFLAKVTPDTLNKLPRGSLEKFNIGDDCPIFQGMFDYAALYAGAS 138
A L H++ +VN + ++ T K R + + D + G + A L AG+
Sbjct: 110 AEDKHLKLVHTKKHVNLVKSIS--TKKKDSRRNKIASQL-DSIYLNGGSSEAAYLAAGSV 166
Query: 139 LDASRKLLNGQSE--IAINWSGGLHHAKKNNPSGFCYVNDIVLAIVNLL----------- 185
+ + K+ G+ + AI G HHA+ + GFC N++ +A LL
Sbjct: 167 VKVAEKVAEGELDCGFAIVRPPG-HHAESDEAMGFCLFNNVAVAASFLLNERVMTSFDFC 225
Query: 186 ------------------------------RYHP-----RVLYIDIDLHHGDGVQEAFYT 210
R P ++L +D D+HHG+ AF T
Sbjct: 226 DAFSISYLLSNFFGHIPLVRTFVLMLCGINRMQPDLDVKKILIVDWDIHHGNVTGNAFVT 285
Query: 211 TDRVFTVSFHKYNGEFFP--GTGDLDEIGCSRGKHFALNVPL-QDGIEDDSYINLFKSII 267
+G F+P GD + +G G+ F +NVP Q G D Y+ ++ I+
Sbjct: 286 ---------RHDHGSFYPFGDDGDFNMVGEGPGEGFNINVPWEQGGCGDADYLAVWNHIL 336
Query: 268 DPVITSFRPSVIIQQCGADSLGHDRLG 294
PV F+P +I+ G D+ D LG
Sbjct: 337 IPVTKEFKPDIILLSAGFDAAIGDPLG 363
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.321 0.141 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,590,504
Number of Sequences: 60738
Number of extensions: 1320147
Number of successful extensions: 2540
Number of sequences better than 1.0e-05: 49
Number of HSP's better than 0.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 2379
Number of HSP's gapped (non-prelim): 58
length of query: 452
length of database: 30,389,216
effective HSP length: 110
effective length of query: 342
effective length of database: 23,708,036
effective search space: 8108148312
effective search space used: 8108148312
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)