ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI2395 good O KOG1439 Posttranslational modification, protein turnover, chaperones RAB proteins geranylgeranyltransferase component A (RAB escort protein)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI2395 854314 855648 445
(445 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YER136w [O] KOG1439 RAB proteins geranylgeranyltransferase compo... 770 0.0
SPAC22H10.12c [O] KOG1439 RAB proteins geranylgeranyltransferase... 565 e-161
Hs4503971 [O] KOG1439 RAB proteins geranylgeranyltransferase com... 487 e-137
Hs6598323 [O] KOG1439 RAB proteins geranylgeranyltransferase com... 483 e-136
CE14944 [O] KOG1439 RAB proteins geranylgeranyltransferase compo... 475 e-134
7297522 [O] KOG1439 RAB proteins geranylgeranyltransferase compo... 470 e-132
At5g09550 [O] KOG1439 RAB proteins geranylgeranyltransferase com... 467 e-131
At2g44100 [O] KOG1439 RAB proteins geranylgeranyltransferase com... 463 e-130
At3g59920 [O] KOG1439 RAB proteins geranylgeranyltransferase com... 460 e-129
ECU02g1410 [O] KOG1439 RAB proteins geranylgeranyltransferase co... 223 3e-58
Hs18547831 [O] KOG1439 RAB proteins geranylgeranyltransferase co... 168 1e-41
Hs17448269 [O] KOG1439 RAB proteins geranylgeranyltransferase co... 161 2e-39
CE27306 [TU] KOG4405 GDP dissociation inhibitor 155 1e-37
7302459 [TU] KOG4405 GDP dissociation inhibitor 144 3e-34
Hs4502811 [TU] KOG4405 GDP dissociation inhibitor 122 1e-27
YOR370c [O] KOG1439 RAB proteins geranylgeranyltransferase compo... 117 3e-26
At3g06540 [TU] KOG4405 GDP dissociation inhibitor 110 3e-24
SPBC15C4.03 [O] KOG1439 RAB proteins geranylgeranyltransferase c... 109 7e-24
Hs9966761 [TU] KOG4405 GDP dissociation inhibitor 107 3e-23
>YER136w [O] KOG1439 RAB proteins geranylgeranyltransferase component A (RAB
escort protein)
Length = 451
Score = 770 bits (1988), Expect = 0.0
Identities = 361/442 (81%), Positives = 419/442 (94%), Gaps = 1/442 (0%)
Query: 1 MDENYDVIVLGTGLTECILSGLLSIEGKKVLHVDRQDHYGGESSSVTLTQLYSKFKQHPL 60
+D +YDVIVLGTG+TECILSGLLS++GKKVLH+D+QDHYGGE++SVTL+QLY KFKQ+P+
Sbjct: 6 IDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPI 65
Query: 61 SKEDIESKFGKDRDWNVDLIPKFLMANGELTNILVHTDVTRYIEFKQVAGSYVYNRGKVY 120
SKE+ ESKFGKDRDWNVDLIPKFLMANGELTNIL+HTDVTRY++FKQV+GSYV+ +GK+Y
Sbjct: 66 SKEERESKFGKDRDWNVDLIPKFLMANGELTNILIHTDVTRYVDFKQVSGSYVFKQGKIY 125
Query: 121 KVPANEMEAISSSLLGIFEKRRMKKFLEWISAYNEEDIATHQGLNLDQNTMDEVYYKFGL 180
KVPANE+EAISS L+GIFEKRRMKKFLEWIS+Y E+D++THQGL+LD+NTMDEVYYKFGL
Sbjct: 126 KVPANEIEAISSPLMGIFEKRRMKKFLEWISSYKEDDLSTHQGLDLDKNTMDEVYYKFGL 185
Query: 181 GNSTREFIGHAMALWTNDDYLQQPARPSVERIILYVQSISRFGKSPYIYPMYGLGELPQG 240
GNST+EFIGHAMALWTNDDYLQQPARPS ERI+LY QS++R+GKSPY+YPMYGLGELPQG
Sbjct: 186 GNSTKEFIGHAMALWTNDDYLQQPARPSFERILLYCQSVARYGKSPYLYPMYGLGELPQG 245
Query: 241 FARLSAIYGGTYMLNTPIEKVLY-SDDGKFEGIVTKEGTAKAPIVIADPTYFPEKCKTTG 299
FARLSAIYGGTYML+TPI++VLY D GKFEG+ TK GT KAP+VIADPTYFPEKCK+TG
Sbjct: 246 FARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKTKLGTFKAPLVIADPTYFPEKCKSTG 305
Query: 300 EKVIRAICITKQPVPNTSNADSCQIIIPQSQVGRKNDIYIATVSDAHKVTSKGHYLASVS 359
++VIRAICI PVPNTSNADS QIIIPQSQ+GRK+DIY+A VSDAH V SKGHYLA +S
Sbjct: 306 QRVIRAICILNHPVPNTSNADSLQIIIPQSQLGRKSDIYVAIVSDAHNVCSKGHYLAIIS 365
Query: 360 TIIETDKPHIELEPAFKMLGPIEERFMGISEIFEPIEDGTKDNIYISKSYDSSSHFESMT 419
TIIETDKPHIELEPAFK+LGPIEE+FMGI+E+FEP EDG+KDNIY+S+SYD+SSHFESMT
Sbjct: 366 TIIETDKPHIELEPAFKLLGPIEEKFMGIAELFEPREDGSKDNIYLSRSYDASSHFESMT 425
Query: 420 DDVKDIYFRITGHPLVLKKRED 441
DDVKDIYFR+TGHPLVLK+R++
Sbjct: 426 DDVKDIYFRVTGHPLVLKQRQE 447
>SPAC22H10.12c [O] KOG1439 RAB proteins geranylgeranyltransferase component A (RAB
escort protein)
Length = 440
Score = 565 bits (1457), Expect = e-161
Identities = 268/445 (60%), Positives = 353/445 (79%), Gaps = 5/445 (1%)
Query: 1 MDENYDVIVLGTGLTECILSGLLSIEGKKVLHVDRQDHYGGESSSVTLTQLYSKFKQHPL 60
MDE YDVIVLGTGLTEC+LSGLLS++GKKVLH+DR D+YG +S+S+ LTQLY+ F+
Sbjct: 1 MDEEYDVIVLGTGLTECVLSGLLSVDGKKVLHIDRNDYYGADSASLNLTQLYALFRPGEQ 60
Query: 61 SKEDIESKFGKDRDWNVDLIPKFLMANGELTNILVHTDVTRYIEFKQVAGSYVYNRGKVY 120
E + G+DRDW VDL+PKFLMANG+LTNIL++TDVTRYIEFKQ+AGSYVY G++
Sbjct: 61 RPESL----GRDRDWCVDLVPKFLMANGDLTNILIYTDVTRYIEFKQIAGSYVYRDGRIA 116
Query: 121 KVPANEMEAISSSLLGIFEKRRMKKFLEWISAYNEEDIATHQGLNLDQNTMDEVYYKFGL 180
KVP NEMEA+ S L+ +FEKRR KKFLEW++ Y E+D +T++ +N+D+++M+ V+ KFGL
Sbjct: 117 KVPGNEMEALKSPLMSLFEKRRAKKFLEWVNNYREDDPSTYKDINIDRDSMESVFKKFGL 176
Query: 181 GNSTREFIGHAMALWTNDDYLQQPARPSVERIILYVQSISRFGKSPYIYPMYGLGELPQG 240
+ T++FIGHAMAL+ +D YL++PAR + ERI+LY SI++FGKSPYIYP+YGLGELPQG
Sbjct: 177 QSGTQDFIGHAMALYLDDAYLKKPARETRERILLYASSIAKFGKSPYIYPLYGLGELPQG 236
Query: 241 FARLSAIYGGTYMLNTPIEKVLYSDDGKFEGIVTKEGTAKAPIVIADPTYFPEKCKTTGE 300
FARLSAIYGGTYMLN P+++++Y DDG G+ + + AKA +I DP+YF EK ++ G
Sbjct: 237 FARLSAIYGGTYMLNQPVDEIVYGDDGVAIGVRSGDQVAKAKQIIGDPSYFREKVRSVG- 295
Query: 301 KVIRAICITKQPVPNTSNADSCQIIIPQSQVGRKNDIYIATVSDAHKVTSKGHYLASVST 360
+++RAICI P+PNT N DS QIIIPQ+QV RK+DIYIA +S H V KG+YLA +ST
Sbjct: 296 RLVRAICILNHPIPNTDNLDSVQIIIPQNQVKRKHDIYIAGISSVHNVCPKGYYLAIIST 355
Query: 361 IIETDKPHIELEPAFKMLGPIEERFMGISEIFEPIEDGTKDNIYISKSYDSSSHFESMTD 420
I+ET P E+ P K+LGP+ E F + EI+EP+ DGTKD YISKS D++SHFE++T
Sbjct: 356 IVETANPLSEIAPGLKLLGPVVESFSRVQEIYEPVTDGTKDQCYISKSVDATSHFETLTC 415
Query: 421 DVKDIYFRITGHPLVLKKREDVAEE 445
DV+DIY R+TG LVLK+R + ++
Sbjct: 416 DVRDIYKRMTGTDLVLKQRPKMEDQ 440
>Hs4503971 [O] KOG1439 RAB proteins geranylgeranyltransferase component A (RAB
escort protein)
Length = 447
Score = 487 bits (1253), Expect = e-137
Identities = 231/432 (53%), Positives = 326/432 (74%), Gaps = 7/432 (1%)
Query: 1 MDENYDVIVLGTGLTECILSGLLSIEGKKVLHVDRQDHYGGESSSVT-LTQLYSKFKQHP 59
MDE YDVIVLGTGLTECILSG++S+ GKKVLH+DR +YGGESSS+T L +LY +F+
Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQL-- 58
Query: 60 LSKEDIESKFGKDRDWNVDLIPKFLMANGELTNILVHTDVTRYIEFKQVAGSYVYNRGKV 119
E G+ RDWNVDLIPKFLMANG+L +L++T+VTRY++FK V GS+VY GK+
Sbjct: 59 --LEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKI 116
Query: 120 YKVPANEMEAISSSLLGIFEKRRMKKFLEWISAYNEEDIATHQGLNLDQNTMDEVYYKFG 179
YKVP+ E EA++S+L+G+FEKRR +KFL +++ ++E D T +G++ +M +VY KF
Sbjct: 117 YKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFD 176
Query: 180 LGNSTREFIGHAMALWTNDDYLQQPARPSVERIILYVQSISRFGKSPYIYPMYGLGELPQ 239
LG +F GHA+AL+ DDYL QP +V RI LY +S++R+GKSPY+YP+YGLGELPQ
Sbjct: 177 LGQDVIDFTGHALALYRTDDYLDQPCLETVNRIKLYSESLARYGKSPYLYPLYGLGELPQ 236
Query: 240 GFARLSAIYGGTYMLNTPIEKVLYSDDGKFEGIVTKEGTAKAPIVIADPTYFPEKCKTTG 299
GFARLSAIYGGTYMLN P++ ++ ++GK G+ ++ A+ +I DP+Y P++ + G
Sbjct: 237 GFARLSAIYGGTYMLNKPVDDII-MENGKVVGVKSEGEVARCKQLICDPSYIPDRVRKAG 295
Query: 300 EKVIRAICITKQPVPNTSNADSCQIIIPQSQVGRKNDIYIATVSDAHKVTSKGHYLASVS 359
+ VIR ICI P+ NT++A+SCQIIIPQ+QV RK+DIY+ +S AH V ++G Y+A S
Sbjct: 296 Q-VIRIICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIAIAS 354
Query: 360 TIIETDKPHIELEPAFKMLGPIEERFMGISEIFEPIEDGTKDNIYISKSYDSSSHFESMT 419
T +ET P E+EPA ++L PI+++F+ IS+++EPI+DG + ++ S SYD+++HFE+
Sbjct: 355 TTVETTDPEKEVEPALELLEPIDQKFVAISDLYEPIDDGCESQVFCSCSYDATTHFETTC 414
Query: 420 DDVKDIYFRITG 431
+D+KDIY R+ G
Sbjct: 415 NDIKDIYKRMAG 426
>Hs6598323 [O] KOG1439 RAB proteins geranylgeranyltransferase component A (RAB
escort protein)
Length = 445
Score = 483 bits (1244), Expect = e-136
Identities = 235/450 (52%), Positives = 334/450 (74%), Gaps = 11/450 (2%)
Query: 1 MDENYDVIVLGTGLTECILSGLLSIEGKKVLHVDRQDHYGGESSSVT-LTQLYSKFKQHP 59
M+E YDVIVLGTGLTECILSG++S+ GKKVLH+DR +YGGES+S+T L LY +FK
Sbjct: 1 MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRFKIPG 60
Query: 60 LSKEDIESKFGKDRDWNVDLIPKFLMANGELTNILVHTDVTRYIEFKQVAGSYVYNRGKV 119
E + G+ RDWNVDLIPKFLMANG+L +L++T+VTRY++FK GS+VY GK+
Sbjct: 61 SPPESM----GRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVTEGSFVYKGGKI 116
Query: 120 YKVPANEMEAISSSLLGIFEKRRMKKFLEWISAYNEEDIATHQGLNLDQNTMDEVYYKFG 179
YKVP+ E EA++SSL+G+FEKRR +KFL +++ ++E+D T +G++ + TM +VY KF
Sbjct: 117 YKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGIDPKKTTMRDVYKKFD 176
Query: 180 LGNSTREFIGHAMALWTNDDYLQQPARPSVERIILYVQSISRFGKSPYIYPMYGLGELPQ 239
LG +F GHA+AL+ DDYL QP ++ RI LY +S++R+GKSPY+YP+YGLGELPQ
Sbjct: 177 LGQDVIDFTGHALALYRTDDYLDQPCYETINRIKLYSESLARYGKSPYLYPLYGLGELPQ 236
Query: 240 GFARLSAIYGGTYMLNTPIEKVLYSDDGKFEGIVTKEGTAKAPIVIADPTYFPEKCKTTG 299
GFARLSAIYGGTYMLN PIE+++ +GK G+ ++ A+ +I DP+Y ++ + G
Sbjct: 237 GFARLSAIYGGTYMLNKPIEEIIV-QNGKVIGVKSEGEIARCKQLICDPSYVKDRVEKVG 295
Query: 300 EKVIRAICITKQPVPNTSNADSCQIIIPQSQVGRKNDIYIATVSDAHKVTSKGHYLASVS 359
+ VIR ICI P+ NT++A+SCQIIIPQ+QV RK+DIY+ +S AH V ++G Y+A VS
Sbjct: 296 Q-VIRVICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISFAHNVAAQGKYIAIVS 354
Query: 360 TIIETDKPHIELEPAFKMLGPIEERFMGISEIFEPIEDGTKDNIYISKSYDSSSHFESMT 419
T +ET +P E+ PA ++L PIE++F+ IS++ P + GT+ I+IS++YD+++HFE+
Sbjct: 355 TTVETKEPEKEIRPALELLEPIEQKFVSISDLLVPKDLGTESQIFISRTYDATTHFETTC 414
Query: 420 DDVKDIYFRITGHPL----VLKKREDVAEE 445
DD+K+IY R+TG + +K+ D+ E
Sbjct: 415 DDIKNIYKRMTGSEFDFEEMKRKKNDIYGE 444
>CE14944 [O] KOG1439 RAB proteins geranylgeranyltransferase component A (RAB
escort protein)
Length = 444
Score = 475 bits (1223), Expect = e-134
Identities = 232/431 (53%), Positives = 321/431 (73%), Gaps = 6/431 (1%)
Query: 1 MDENYDVIVLGTGLTECILSGLLSIEGKKVLHVDRQDHYGGESSSVT-LTQLYSKFKQHP 59
MDE YD IVLGTGL ECI+SG+LS+ GKKVLH+DR ++YGGES+S+T L QLY KF P
Sbjct: 1 MDEEYDAIVLGTGLKECIISGMLSVSGKKVLHIDRNNYYGGESASLTPLEQLYEKF-HGP 59
Query: 60 LSKEDIESKFGKDRDWNVDLIPKFLMANGELTNILVHTDVTRYIEFKQVAGSYVYNRGKV 119
+K + + G+ RDWNVDLIPKFLMANG L +L+HT VTRY+EFK + S+V GK+
Sbjct: 60 QAKP--QQEMGRGRDWNVDLIPKFLMANGPLVKLLIHTGVTRYLEFKSIEASFVVKGGKI 117
Query: 120 YKVPANEMEAISSSLLGIFEKRRMKKFLEWISAYNEEDIATHQGLNLDQNTMDEVYYKFG 179
YKVPA+EMEA+++SL+G+FEKRR KKFL W+ ++E T QGL+ +TM +VY KFG
Sbjct: 118 YKVPADEMEALATSLMGMFEKRRFKKFLVWVQQFDENKEDTWQGLDPHNSTMQQVYEKFG 177
Query: 180 LGNSTREFIGHAMALWTNDDYLQQPARPSVERIILYVQSISRFGKSPYIYPMYGLGELPQ 239
L +T +F GHA+AL+ +D++ QP P+VE+I LY S++R+GKSPY+YP+YGLGELPQ
Sbjct: 178 LDENTADFTGHALALYRDDEHKNQPYAPAVEKIRLYSDSLARYGKSPYLYPLYGLGELPQ 237
Query: 240 GFARLSAIYGGTYMLNTPIEKVLYSDDGKFEGIVTKEGTAKAPIVIADPTYFPEKCKTTG 299
GFARLSAIYGGTYML+ P+++++ ++GK G+ + + + DP+Y ++ K TG
Sbjct: 238 GFARLSAIYGGTYMLDKPVDEIV-MENGKAIGVKCGDEIVRGKQIYCDPSYAKDRVKKTG 296
Query: 300 EKVIRAICITKQPVPNTSNADSCQIIIPQSQVGRKNDIYIATVSDAHKVTSKGHYLASVS 359
+ V+RAIC+ P+PNT++A SCQIIIPQ QVGR DIYI+ S+ + VT KG YLA VS
Sbjct: 297 Q-VVRAICLLNHPIPNTNDAQSCQIIIPQKQVGRHYDIYISCCSNTNMVTPKGWYLAMVS 355
Query: 360 TIIETDKPHIELEPAFKMLGPIEERFMGISEIFEPIEDGTKDNIYISKSYDSSSHFESMT 419
T +ET P E+ P ++LG I E+F+ IS+++EP + G++ I+IS+SYD+++HFE+
Sbjct: 356 TTVETANPEAEVLPGLQLLGAIAEKFIQISDVYEPSDLGSESQIFISQSYDATTHFETTC 415
Query: 420 DDVKDIYFRIT 430
DV +++ R T
Sbjct: 416 KDVLNMFERGT 426
>7297522 [O] KOG1439 RAB proteins geranylgeranyltransferase component A (RAB
escort protein)
Length = 443
Score = 470 bits (1209), Expect = e-132
Identities = 228/439 (51%), Positives = 317/439 (71%), Gaps = 7/439 (1%)
Query: 1 MDENYDVIVLGTGLTECILSGLLSIEGKKVLHVDRQDHYGGESSSVT-LTQLYSKFKQHP 59
M+E YD IVLGTGL ECILSG+LS+ GKKVLH+DR +YGGES+S+T L +L+ ++ P
Sbjct: 1 MNEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFQRYGLEP 60
Query: 60 LSKEDIESKFGKDRDWNVDLIPKFLMANGELTNILVHTDVTRYIEFKQVAGSYVYNRGKV 119
+ +FG+ RDWNVDLIPKFLMANG+L +L+HT VTRY+EFK + GSYVY GK+
Sbjct: 61 PGE-----RFGRGRDWNVDLIPKFLMANGQLVKLLIHTGVTRYLEFKSIEGSYVYKGGKI 115
Query: 120 YKVPANEMEAISSSLLGIFEKRRMKKFLEWISAYNEEDIATHQGLNLDQNTMDEVYYKFG 179
KVP ++ EA++S L+G+FEKRR + FL ++ + E+D T + + + M +Y KFG
Sbjct: 116 AKVPVDQKEALASDLMGMFEKRRFRNFLIYVQDFREDDPKTWKDFDPTKANMQGLYDKFG 175
Query: 180 LGNSTREFIGHAMALWTNDDYLQQPARPSVERIILYVQSISRFGKSPYIYPMYGLGELPQ 239
L +T++F GHA+AL+ +D+YL +PA ++ RI LY S++R+GKSPY+YPMYGLGELPQ
Sbjct: 176 LDKNTQDFTGHALALFRDDEYLNEPAVNTIRRIKLYSDSLARYGKSPYLYPMYGLGELPQ 235
Query: 240 GFARLSAIYGGTYMLNTPIEKVLYSDDGKFEGIVTKEGTAKAPIVIADPTYFPEKCKTTG 299
GFARLSAIYGGTYML+ PI++++ + GK G+ + E AK V DP+Y PEK + G
Sbjct: 236 GFARLSAIYGGTYMLDKPIDEIVLGEGGKVVGVRSGEEVAKCKQVYCDPSYVPEKVRKRG 295
Query: 300 EKVIRAICITKQPVPNTSNADSCQIIIPQSQVGRKNDIYIATVSDAHKVTSKGHYLASVS 359
KVIR ICI PV +T + S QIIIPQ QVGRK+DIY++ VS H+V +KG ++ VS
Sbjct: 296 -KVIRCICILDHPVASTKDGLSTQIIIPQKQVGRKSDIYVSLVSSTHQVAAKGWFVGMVS 354
Query: 360 TIIETDKPHIELEPAFKMLGPIEERFMGISEIFEPIEDGTKDNIYISKSYDSSSHFESMT 419
T +ET+ P +E++P +L PI ++F+ IS+ EPI+DG++ I+IS+SYD+++HFE+
Sbjct: 355 TTVETENPEVEIKPGLDLLEPIAQKFVTISDYLEPIDDGSESQIFISESYDATTHFETTC 414
Query: 420 DDVKDIYFRITGHPLVLKK 438
DV +I+ R TG K
Sbjct: 415 LDVLNIFKRGTGETFDFSK 433
>At5g09550 [O] KOG1439 RAB proteins geranylgeranyltransferase component A (RAB
escort protein)
Length = 445
Score = 467 bits (1202), Expect = e-131
Identities = 235/437 (53%), Positives = 312/437 (70%), Gaps = 6/437 (1%)
Query: 1 MDENYDVIVLGTGLTECILSGLLSIEGKKVLHVDRQDHYGGESSSVTLTQLYSKFKQHPL 60
MDE YDVIVLGTGL ECILSGLLS++G KVLH+DR D+YGGESSS+ LTQL+ +F+
Sbjct: 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLTQLWKRFRGSDT 60
Query: 61 SKEDIESKFGKDRDWNVDLIPKFLMANGELTNILVHTDVTRYIEFKQVAGSYVYNRGKVY 120
+E++ G R++NVD+IPKF+MANG L L+HTDVT+Y+ FK V GS+VY +GK+Y
Sbjct: 61 PEENL----GASREYNVDMIPKFIMANGLLVQTLIHTDVTKYLNFKAVDGSFVYKKGKIY 116
Query: 121 KVPANEMEAISSSLLGIFEKRRMKKFLEWISAYNEEDIATHQGLNLDQNTMDEVYYKFGL 180
KVPA ++EA+ S L+G+FEKRR +KF ++ Y+E+D +H+GL+L + T E+ K+GL
Sbjct: 117 KVPATDVEALKSPLMGLFEKRRARKFFIYVQDYDEKDPKSHEGLDLSKVTAREIISKYGL 176
Query: 181 GNSTREFIGHAMALWTNDDYLQQPARPSVERIILYVQSISRF-GKSPYIYPMYGLGELPQ 239
+ T +FIGHA+AL +DDYL QPA V+RI LY +S++RF G SPYIYP+YGLGELPQ
Sbjct: 177 EDDTIDFIGHALALHNDDDYLDQPAIDFVKRIKLYAESLARFQGGSPYIYPLYGLGELPQ 236
Query: 240 GFARLSAIYGGTYMLNTPIEKVLYSDDGKFEGIVTKEGTAKAPIVIADPTYFPEKCKTTG 299
FARLSA+YGGTYMLN P KV + GK G+ + TAK V+ DP+Y EK K G
Sbjct: 237 AFARLSAVYGGTYMLNKPECKVEFDGSGKAIGVTSAGETAKCKKVVCDPSYLSEKVKKVG 296
Query: 300 EKVIRAICITKQPVPNTSNADSCQIIIPQSQVGRKNDIYIATVSDAHKVTSKGHYLASVS 359
KV RA+CI P+P+T++A S QII+PQ Q+GRK+D+Y+ S AH V KG Y+A VS
Sbjct: 297 -KVTRAVCIMSHPIPDTNDAHSVQIILPQKQLGRKSDMYLFCCSYAHNVAPKGKYIAFVS 355
Query: 360 TIIETDKPHIELEPAFKMLGPIEERFMGISEIFEPIEDGTKDNIYISKSYDSSSHFESMT 419
ETD P EL+P ++LGP +E F + + P +DN +IS +YD+++HFES
Sbjct: 356 AEAETDNPEEELKPGIELLGPTDEIFYHSYDTYVPTNIQEEDNCFISATYDATTHFESTV 415
Query: 420 DDVKDIYFRITGHPLVL 436
DV D+Y +ITG L L
Sbjct: 416 VDVLDMYTKITGKTLDL 432
>At2g44100 [O] KOG1439 RAB proteins geranylgeranyltransferase component A (RAB
escort protein)
Length = 445
Score = 463 bits (1192), Expect = e-130
Identities = 229/437 (52%), Positives = 312/437 (70%), Gaps = 6/437 (1%)
Query: 1 MDENYDVIVLGTGLTECILSGLLSIEGKKVLHVDRQDHYGGESSSVTLTQLYSKFKQHPL 60
MDE Y+VIVLGTGL ECILSGLLS++G KVLH+DR D+YGGES+S+ L QL+ KF+
Sbjct: 1 MDEEYEVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESTSLNLNQLWKKFR---- 56
Query: 61 SKEDIESKFGKDRDWNVDLIPKFLMANGELTNILVHTDVTRYIEFKQVAGSYVYNRGKVY 120
+E + G RD+NVD++PKF+MANG+L +L+HTDVT+Y+ FK V GSYV+ +GKV
Sbjct: 57 GEEKAPAHLGSSRDYNVDMMPKFMMANGKLVRVLIHTDVTKYLSFKAVDGSYVFVQGKVQ 116
Query: 121 KVPANEMEAISSSLLGIFEKRRMKKFLEWISAYNEEDIATHQGLNLDQNTMDEVYYKFGL 180
KVPA MEA+ S L+GIFEKRR KF ++ Y+E+D TH G++L + T ++ KFGL
Sbjct: 117 KVPATPMEALKSPLMGIFEKRRAGKFFSYVQEYDEKDPKTHDGMDLRRVTTKDLIAKFGL 176
Query: 181 GNSTREFIGHAMALWTNDDYLQQPARPSVERIILYVQSISRF-GKSPYIYPMYGLGELPQ 239
T +FIGHA+AL ND++L QPA +V R+ LY +S++RF G SPYIYP+YGLGELPQ
Sbjct: 177 KEDTIDFIGHAVALHCNDNHLHQPAYDTVMRMKLYAESLARFQGGSPYIYPLYGLGELPQ 236
Query: 240 GFARLSAIYGGTYMLNTPIEKVLYSDDGKFEGIVTKEGTAKAPIVIADPTYFPEKCKTTG 299
FARLSA+YGGTYMLN P KV + ++GK G+ ++ TAK V+ DP+Y K + G
Sbjct: 237 AFARLSAVYGGTYMLNKPECKVEFDEEGKVSGVTSEGETAKCKKVVCDPSYLTNKVRKIG 296
Query: 300 EKVIRAICITKQPVPNTSNADSCQIIIPQSQVGRKNDIYIATVSDAHKVTSKGHYLASVS 359
+V RAI I P+PNT+++ S Q+I+PQ Q+GRK+D+Y+ S +H V KG ++A VS
Sbjct: 297 -RVARAIAIMSHPIPNTNDSQSVQVILPQKQLGRKSDMYVFCCSYSHNVAPKGKFIAFVS 355
Query: 360 TIIETDKPHIELEPAFKMLGPIEERFMGISEIFEPIEDGTKDNIYISKSYDSSSHFESMT 419
T ETD P EL+P +LGP++E F I + +EP+ + T DN +IS SYD+++HF++
Sbjct: 356 TDAETDNPQTELQPGIDLLGPVDELFFDIYDRYEPVNEPTLDNCFISTSYDATTHFDTTV 415
Query: 420 DDVKDIYFRITGHPLVL 436
DV ++Y ITG L L
Sbjct: 416 VDVLNMYKLITGKELDL 432
>At3g59920 [O] KOG1439 RAB proteins geranylgeranyltransferase component A (RAB
escort protein)
Length = 444
Score = 460 bits (1183), Expect = e-129
Identities = 229/437 (52%), Positives = 309/437 (70%), Gaps = 6/437 (1%)
Query: 1 MDENYDVIVLGTGLTECILSGLLSIEGKKVLHVDRQDHYGGESSSVTLTQLYSKFKQHPL 60
MDE Y+VIVLGTGL ECILSGLLS++G KVLH+DR D+YGGES+S+ L QL+ KF+
Sbjct: 1 MDEEYEVIVLGTGLKECILSGLLSVDGVKVLHMDRNDYYGGESTSLNLNQLWKKFR---- 56
Query: 61 SKEDIESKFGKDRDWNVDLIPKFLMANGELTNILVHTDVTRYIEFKQVAGSYVYNRGKVY 120
+E G RD+NVD++PKF+M NG+L L+HTDVT+Y+ FK V GSYV+ +GKV
Sbjct: 57 GEEKAPEHLGASRDYNVDMMPKFMMGNGKLVRTLIHTDVTKYLSFKAVDGSYVFVKGKVQ 116
Query: 121 KVPANEMEAISSSLLGIFEKRRMKKFLEWISAYNEEDIATHQGLNLDQNTMDEVYYKFGL 180
KVPA MEA+ SSL+GIFEKRR KF ++ Y+E+D TH G++L + T E+ K+GL
Sbjct: 117 KVPATPMEALKSSLMGIFEKRRAGKFFSFVQEYDEKDPKTHDGMDLTRVTTKELIAKYGL 176
Query: 181 GNSTREFIGHAMALWTNDDYLQQPARPSVERIILYVQSISRF-GKSPYIYPMYGLGELPQ 239
+T +FIGHA+AL TND +L QPA +V R+ LY +S++RF G SPYIYP+YGLGELPQ
Sbjct: 177 DGNTIDFIGHAVALHTNDQHLDQPAFDTVMRMKLYAESLARFQGTSPYIYPLYGLGELPQ 236
Query: 240 GFARLSAIYGGTYMLNTPIEKVLYSDDGKFEGIVTKEGTAKAPIVIADPTYFPEKCKTTG 299
FARLSA+YGGTYMLN P KV + + GK G+ ++ TAK ++ DP+Y P K + G
Sbjct: 237 AFARLSAVYGGTYMLNKPECKVEFDEGGKVIGVTSEGETAKCKKIVCDPSYLPNKVRKIG 296
Query: 300 EKVIRAICITKQPVPNTSNADSCQIIIPQSQVGRKNDIYIATVSDAHKVTSKGHYLASVS 359
+V RAI I P+PNT+++ S Q+IIPQ Q+ RK+D+Y+ S +H V KG ++A VS
Sbjct: 297 -RVARAIAIMSHPIPNTNDSHSVQVIIPQKQLARKSDMYVFCCSYSHNVAPKGKFIAFVS 355
Query: 360 TIIETDKPHIELEPAFKMLGPIEERFMGISEIFEPIEDGTKDNIYISKSYDSSSHFESMT 419
T ETD P EL+P +LGP++E F + + +EP+ + DN +IS SYD+++HFE+
Sbjct: 356 TDAETDNPQTELKPGTDLLGPVDEIFFDMYDRYEPVNEPELDNCFISTSYDATTHFETTV 415
Query: 420 DDVKDIYFRITGHPLVL 436
DV ++Y ITG L L
Sbjct: 416 ADVLNMYTLITGKQLDL 432
>ECU02g1410 [O] KOG1439 RAB proteins geranylgeranyltransferase component A (RAB
escort protein)
Length = 429
Score = 223 bits (569), Expect = 3e-58
Identities = 137/434 (31%), Positives = 243/434 (55%), Gaps = 26/434 (5%)
Query: 2 DENYDVIVLGTGLTECILSGLLSIEGKKVLHVDRQDHYGGESSSVTLTQLYSKFKQHPLS 61
+ YD ++LGTGL EC + +L+ + K+V+ +DR YG + +++ T+L + F Q P
Sbjct: 4 EHEYDFVILGTGLVECAVGCILARKNKRVILLDRNPMYGSDFATLRYTELETYF-QSPSI 62
Query: 62 KEDIESKFGKDRDWNVDLIPKFLMANGELTNILVHTDVTRYIEFKQVAGSYVYNRGKVYK 121
++E D ++++DL PK +A+ ++ +LV + Y+EF ++ GS+++ R K++
Sbjct: 63 APELEVY---DTEFSIDLTPKLFLADSKMLKMLVRYGIDEYLEFCRIPGSFLW-RKKLHP 118
Query: 122 VPANEMEAISSSLLGIFEKRRMKKFLEWISAYNEEDIATHQGLNLDQNTMDEVYYKFGLG 181
VP NE +++++ L+GI++K ++ +F + Y E A ++TM E + ++GL
Sbjct: 119 VPTNEAQSMTTGLIGIWQKPKVMRFFWNVRDYARE--AAKGKAYKFKDTMREEFKEYGLT 176
Query: 182 NSTREFIGHAMALWTNDDYLQQPARPSVERIILYVQSISRFG---KSPYIYPMYGLGELP 238
+ E IGH +AL +D YL + + + ++I+ YV+SI + +SPY+YP YGL E+
Sbjct: 177 EESMELIGHGIALNLDDSYLDRHPKETFDKIVTYVRSIICYENSMESPYLYPRYGLSEIA 236
Query: 239 QGFARLSAIYGGTYMLNTPIEKVLYSDDGKFEGIVTKEGT------AKAPIVIADPTYFP 292
QGFAR GG M+N I +V + K ++ +E KA +I+ +YF
Sbjct: 237 QGFARSCCTKGGEIMINAEILEV----NEKNVEVLVREPVNKNVLRIKAGKIISGQSYFQ 292
Query: 293 EKCKTTGEKVIRAICITK-QPVPNTSNADSCQIIIPQSQVGRKNDIYIATVSDAHKVTSK 351
T ++IR ICI + PV T A S QII + ++ R+NDI++ + K T +
Sbjct: 293 RS--TLLYEIIRGICIIRGDPVCVTRGASSAQIIFLKEELKRRNDIFVVVLGSEEKSTPE 350
Query: 352 GHYLASVSTIIETDKPHIELEPAFKMLGPIEERFMGISEIFEPIEDGTKDNIYISKSYDS 411
G+ +A +ST+ ET P E++ + LG I F+ + ++ ED +N+ +K D
Sbjct: 351 GYKVAIISTVKETSDPENEIKVVLEKLGDIVRYFVDVKPVYR-AED--TENVIFTKGVDE 407
Query: 412 SSHFESMTDDVKDI 425
S HFE + ++++ I
Sbjct: 408 SPHFEDIYEEIEGI 421
>Hs18547831 [O] KOG1439 RAB proteins geranylgeranyltransferase component A (RAB
escort protein)
Length = 210
Score = 168 bits (426), Expect = 1e-41
Identities = 84/180 (46%), Positives = 125/180 (68%), Gaps = 2/180 (1%)
Query: 236 ELPQGFARLSAIYGGTYMLNTPIEKVLYSDDGKFEGIVTKEGTAKAPIVIADPTYFPEKC 295
+LPQGFARLSAIYGGTYML PIE+++ + GK G+ ++ A I DP+ ++
Sbjct: 32 QLPQGFARLSAIYGGTYMLKKPIEEIIVQN-GKVIGVKSEGEIACCKQFICDPSCVKDRV 90
Query: 296 KTTGEKVIRAICITKQPVPNTSNADSCQIIIPQSQVGRKNDIYIATVSDAHKVTSKGHYL 355
+ G+ VIR ICI P+ NT++A+SCQIIIPQ+QV RK+DIY+ +S AH V ++G Y+
Sbjct: 91 EKVGQ-VIRVICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISFAHDVAAQGKYI 149
Query: 356 ASVSTIIETDKPHIELEPAFKMLGPIEERFMGISEIFEPIEDGTKDNIYISKSYDSSSHF 415
A VST +ET +P E+ PA ++L P E++F+ S++ P + GT+ I+IS++YD++ F
Sbjct: 150 AIVSTTVETKEPEKEIRPALELLEPTEQKFVSTSDLLIPKDLGTESQIFISRTYDATHVF 209
>Hs17448269 [O] KOG1439 RAB proteins geranylgeranyltransferase component A (RAB
escort protein)
Length = 286
Score = 161 bits (408), Expect = 2e-39
Identities = 85/198 (42%), Positives = 128/198 (63%), Gaps = 2/198 (1%)
Query: 241 FARLSAIYGGTYMLNTPIEKVLYSDDGKFEGIVTKEGTAKAPIVIADPTYFPEKCKTTGE 300
FARLSAIYGGTYMLN PIE+++ D GK GI ++ A +I DP+Y ++ + G+
Sbjct: 91 FARLSAIYGGTYMLNKPIEEIIVQD-GKVIGIKSEGEIAHCKQLICDPSYVKDQLEKVGQ 149
Query: 301 KVIRAICITKQPVPNTSNADSCQIIIPQSQVGRKNDIYIATVSDAHKVTSKGHYLASVST 360
VIR ICI + NTS+ +SCQIIIPQ+QV RK+DI + T+S AH V ++ Y+A V+T
Sbjct: 150 -VIRVICILSHSIKNTSDVNSCQIIIPQNQVSRKSDICVCTISSAHNVATQEKYIAIVTT 208
Query: 361 IIETDKPHIELEPAFKMLGPIEERFMGISEIFEPIEDGTKDNIYISKSYDSSSHFESMTD 420
+ET +P E+ + ++L P F+ IS + P + GT+ I+IS++Y+ ++HFE++
Sbjct: 209 TVETKEPEKEVISSLELLEPTRWEFVSISGLLVPKDLGTESQIFISRAYNPTTHFETIVM 268
Query: 421 DVKDIYFRITGHPLVLKK 438
+K R+ L L+K
Sbjct: 269 TLKTSIRRLQDSSLTLRK 286
>CE27306 [TU] KOG4405 GDP dissociation inhibitor
Length = 510
Score = 155 bits (391), Expect = 1e-37
Identities = 135/522 (25%), Positives = 232/522 (43%), Gaps = 102/522 (19%)
Query: 1 MDENYDVIVLGTGLTECILSGLLSIEGKKVLHVDRQDHYGGESSSVTLTQLYS------- 53
+ E+ DV+VLGTGL E IL+ + G VLH+DR ++YGG+ SS T++ ++
Sbjct: 5 LPESVDVVVLGTGLPEAILASACARAGLSVLHLDRNEYYGGDWSSFTMSMVHEVTENQVK 64
Query: 54 KFKQHPLSK--------------------EDIESKF---GKD---------------RDW 75
K +SK E+IE + GKD R +
Sbjct: 65 KLDSSEISKLSELLTENEQLIELGNREIVENIEMTWIPRGKDEEKPMKTQLEEASQMRRF 124
Query: 76 NVDLIPKFLMANGELTNILVHTDVTRYIEFK----QVAGSYVYNRG-KVYKVPANEMEAI 130
++DL+PK L++ G + L + V+ Y EFK Q+ + G + VP ++ E
Sbjct: 125 SIDLVPKILLSKGAMVQTLCDSQVSHYAEFKLVNRQLCPTETPEAGITLNPVPCSKGEIF 184
Query: 131 SSSLLGIFEKRRMKKFLEWISAYNEEDIATHQGLNLDQNTMDEVYYKF----GLGNSTRE 186
S+ L I EKR + KF+ + + ++ +D T +G L D + +F G+G + +
Sbjct: 185 QSNALSILEKRALMKFITFCTQWSTKD--TEEGRKLLAEHADRPFSEFLEQMGVGKTLQS 242
Query: 187 FIGHAMALWTNDDYLQQPARPSVERIIL----YVQSISRFGKSPYIYPMYGLGELPQGFA 242
FI + + + LQQ RP+ +L ++ S+ FG SP+++P+YG GEL Q F
Sbjct: 243 FIINTIGI------LQQ--RPTAMTGMLASCQFMDSVGHFGPSPFLFPLYGCGELSQCFC 294
Query: 243 RLSAIYGGTYMLNTPIEKVLYSDDGKFEGIVTKEGTAKAPIVIADPTYFPEKCKTTGE-K 301
RL+A++G Y L P++ ++ DGK ++ ++ P + PE + K
Sbjct: 295 RLAAVFGSLYCLGRPVQAIV-KKDGKITAVIANGDRVNCRYIVMSPRFVPETVPASSTLK 353
Query: 302 VIRAICITKQPVPNTSNAD----SCQIIIPQSQVGRKNDIYIATVSDAHKVTSKGHYL-- 355
+ R + T + + + + P + V R + V KGH+L
Sbjct: 354 IERIVYATDKSIKEAEKEQLTLLNLASLRPDAAVSR-----LVEVGFEACTAPKGHFLVH 408
Query: 356 --------ASVSTIIETDKPHIELEPAFKMLGPIEERFMGISEIFEPIEDGTKDNIYISK 407
SV TI E E+EP +KM F S F + +N+ ++
Sbjct: 409 ATGTQEGETSVKTIAEKIFEKNEVEPYWKM------SFTANSMKF---DTAGAENVVVAP 459
Query: 408 SYDSSSHFESMTDDVKDIYF----RITGHPLVLKKREDVAEE 445
D++ H+ S+ ++ + ++ + P +KK E+ EE
Sbjct: 460 PVDANLHYASVVEECRQLFCTTWPELDFLPRAMKKEEEEEEE 501
>7302459 [TU] KOG4405 GDP dissociation inhibitor
Length = 511
Score = 144 bits (363), Expect = 3e-34
Identities = 97/340 (28%), Positives = 164/340 (47%), Gaps = 31/340 (9%)
Query: 1 MDENYDVIVLGTGLTECILSGLLSIEGKKVLHVDRQDHYGGESSSVTLTQLYSKFKQ--- 57
+ E +D++V+GTG TE ++ S GK VLH+D ++YG SS ++ L ++ Q
Sbjct: 5 LPEQFDLVVIGTGFTESCIAAAGSRIGKSVLHLDSNEYYGDVWSSFSMDALCARLDQEVE 64
Query: 58 ------------HPLSKE--------DIESKFGKDRDWNVDLIPKFLMANGELTNILVHT 97
H + KE + +S K R +++DL P+ L A GEL +L+ +
Sbjct: 65 PHSALRNARYTWHSMEKESETDAQSWNRDSVLAKSRRFSLDLCPRILYAAGELVQLLIKS 124
Query: 98 DVTRYIEFKQVAGSYVYNRGKVYKVPANEMEAISSSLLGIFEKRRMKKFLEWISAYNEED 157
++ RY EF+ V + + G++ VP + + ++ L I EKR + KFL + Y E D
Sbjct: 125 NICRYAEFRAVDHVCMRHNGEIVSVPCSRSDVFNTKTLTIVEKRLLMKFLTACNDYGE-D 183
Query: 158 IATHQGLNLDQNTMDEVYYKFGLGNSTREFIGHAMALWTNDDYLQQPARPSVERIILYVQ 217
L T E + + A+A+ ++ ++R ++
Sbjct: 184 KCNEDSLEFRGRTFLEYLQAQRVTEKISSCVMQAIAMCGPSTSFEE----GMQRTQRFLG 239
Query: 218 SISRFGKSPYIYPMYGLGELPQGFARLSAIYGGTYMLNTPIEKVLYSDDGKFEGIVTKEG 277
S+ R+G +P+++PMYG GELPQ F RL A+YGG Y L ++ + D E +++ G
Sbjct: 240 SLGRYGNTPFLFPMYGCGELPQCFCRLCAVYGGIYCLKRAVDDIAL-DSNSNEFLLSSAG 298
Query: 278 -TAKAPIVIADPTYFP-EKCKTTGEKVIRAICITKQPVPN 315
T +A V++ P Y P K + R + I+ P+ N
Sbjct: 299 KTLRAKNVVSAPGYTPVSKGIELKPHISRGLFISSSPLGN 338
>Hs4502811 [TU] KOG4405 GDP dissociation inhibitor
Length = 656
Score = 122 bits (306), Expect = 1e-27
Identities = 79/265 (29%), Positives = 139/265 (51%), Gaps = 11/265 (4%)
Query: 73 RDWNVDLIPKFLMANGELTNILVHTDVTRYIEFKQVAGSYVYNRGKVYKVPANEMEAISS 132
R +N+DL+ K L + G L ++L+ +DV+RY+EFK V + GKV +VP + + +S
Sbjct: 227 RRFNIDLVSKLLYSQGLLIDLLIKSDVSRYVEFKNVTRILAFREGKVEQVPCSRADVFNS 286
Query: 133 SLLGIFEKRRMKKFLEWISAYNEEDIATHQGLNLDQNTMDEVYYKFGLGNSTREFIGHAM 192
L + EKR + KFL + Y E+ +Q Q + E L + + F+ H++
Sbjct: 287 KELTMVEKRMLMKFLTFCLEY-EQHPDEYQAFR--QCSFSEYLKTKKLTPNLQHFVLHSI 343
Query: 193 ALWTNDDYLQQPARPSVERIILYVQSISRFGKSPYIYPMYGLGELPQGFARLSAIYGGTY 252
A+ + + + ++Q + RFG +P+++P+YG GE+PQGF R+ A++GG Y
Sbjct: 344 AMTSESSCTTIDGLNATKN---FLQCLGRFGNTPFLFPLYGQGEIPQGFCRMCAVFGGIY 400
Query: 253 MLNTPIE-KVLYSDDGKFEGIVTKEG-TAKAPIVIADPTYFPEK-CKTTGEKVI-RAICI 308
L ++ V+ + G+ + I+ G A I + +Y E+ C K I RA+ I
Sbjct: 401 CLRHKVQCFVVDKESGRCKAIIDHFGQRINAKYFIVEDSYLSEETCSNVQYKQISRAVLI 460
Query: 309 TKQPVPNTS-NADSCQIIIPQSQVG 332
T Q + T + + +I+P ++ G
Sbjct: 461 TDQSILKTDLDQQTSILIVPPAEPG 485
Score = 51.6 bits (122), Expect = 2e-06
Identities = 22/54 (40%), Positives = 37/54 (67%)
Query: 5 YDVIVLGTGLTECILSGLLSIEGKKVLHVDRQDHYGGESSSVTLTQLYSKFKQH 58
+DV+++GTGL E IL+ S G++VLH+D + +YGG +S + + L S K++
Sbjct: 9 FDVVIIGTGLPESILAAACSRSGQRVLHIDSRSYYGGNWASFSFSGLLSWLKEY 62
>YOR370c [O] KOG1439 RAB proteins geranylgeranyltransferase component A (RAB
escort protein)
Length = 603
Score = 117 bits (294), Expect = 3e-26
Identities = 101/414 (24%), Positives = 178/414 (42%), Gaps = 63/414 (15%)
Query: 3 ENYDVIVLGTGLTECILSGLLSIEGKKVLHVDRQDHYGGESSSVTLTQL----------- 51
+ DV++ GTG+ E +L+ L+ +G VLH+D+ D+YG S+++T+ Q+
Sbjct: 45 DKVDVLIAGTGMVESVLAAALAWQGSNVLHIDKNDYYGDTSATLTVDQIKRWVNEVNEGS 104
Query: 52 YSKFKQHPLSKED-IESKFGKDRDWNVDLIPKFLMANGELTNILVHTDVTRYIEFKQVAG 110
S +K L I S RD+ +DL PK L A +L +IL+ + V +Y+EF+ ++
Sbjct: 105 VSCYKNAKLYVSTLIGSGKYSSRDFGIDLSPKILFAKSDLLSILIKSRVHQYLEFQSLSN 164
Query: 111 SYVYNRGKVYKVPANEMEAISSSLLGIFEKRRMKKFLEWI----------SAYNEEDIAT 160
+ Y K+ + E + L + KR + KF++++ Y E ++
Sbjct: 165 FHTYENDCFEKLTNTKQEIFTDQNLPLMTKRNLMKFIKFVLNWEAQTEIWQPYAERTMSD 224
Query: 161 HQG--LNLDQNTMDEVYYKFGLGNSTREFIGHAMALWTNDDYLQQPARPSVERIILYVQS 218
G L++ + E+ + GL + A+ +RI Y+ S
Sbjct: 225 FLGEKFKLEKPQVFELIFSIGLCYDLNVKVPEAL-----------------QRIRRYLTS 267
Query: 219 ISRFGKSPYIYPMY-GLGELPQGFARLSAIYGGTYMLN------TPIEKVLYSDDGKFEG 271
+G P + Y G GEL QGF R +A+ G TY LN P KV DG
Sbjct: 268 FDVYGPFPALCSKYGGPGELSQGFCRSAAVGGATYKLNEKLVSFNPTTKVATFQDGSKVE 327
Query: 272 IVTKEGTAKAPIVIADPTYFPEKCKTTGE---KVIRAICITKQPVPNTSN--ADSCQIII 326
+ K VI PT P+ K + +V R CI + P N + ++
Sbjct: 328 VSEK--------VIISPTQAPKDSKHVPQQQYQVHRLTCIVENPCTEWFNEGESAAMVVF 379
Query: 327 PQSQV--GRKNDIYIATVSDAHKVTSKGHYLASVSTIIETDKPHIELEPAFKML 378
P + G K + + ++ +G + +ST + + ++++ A + +
Sbjct: 380 PPGSLKSGNKEVVQAFILGAGSEICPEGTIVWYLSTTEQGPRAEMDIDAALEAM 433
>At3g06540 [TU] KOG4405 GDP dissociation inhibitor
Length = 536
Score = 110 bits (276), Expect = 3e-24
Identities = 96/370 (25%), Positives = 166/370 (43%), Gaps = 64/370 (17%)
Query: 4 NYDVIVLGTGLTECILSGLLSIEGKKVLHVDRQDHYGGESSSVTLTQLYSKFKQHPLSK- 62
NYD+IV+GTG++E +L+ S G VLH+D YG +S++L L S + +S
Sbjct: 14 NYDLIVVGTGVSESVLAAAASSSGSSVLHLDPNPFYGSHFASLSLPDLTSFLHSNSVSPP 73
Query: 63 --------------------------------EDIESKFGKD--RDWNVDLI-PKFLMAN 87
ES+ ++ R +NVDL P+ +
Sbjct: 74 PSPSSPPLPPSNNHDFISVDLVNRSLYSSVEISSFESEILEEHSRRFNVDLAGPRVVFCA 133
Query: 88 GELTNILVHTDVTRYIEFKQVAGSYV-YNRGKVYKVPANEMEAISSSLLGIFEKRRMKKF 146
E N+++ + Y+EFK + S+V + G++ VP + L + EK ++ KF
Sbjct: 134 DESINLMLKSGANNYVEFKSIDASFVGDSSGELRNVPDSRAAIFKDKSLTLLEKNQLMKF 193
Query: 147 LEWISAY----NEEDIATHQGLNLDQNTMDEVYY----KFGLGNSTREFIGHAMALWTND 198
+ + ++ E+D +T + + + M+ + K L + I +A+A+ D
Sbjct: 194 FKLVQSHLASSTEKDDST--TVKISEEDMESPFVDFLSKMRLPPKIKSIILYAIAMLDYD 251
Query: 199 DYLQQPAR------PSVERIILYVQSISRFGKS--PYIYPMYGLGELPQGFARLSAIYGG 250
+ R ++R+ LY+ S+ RF + IYP+YG GELPQ F R +A+ G
Sbjct: 252 QDNTETCRHLLKTKEGIDRLALYITSMGRFSNALGALIYPIYGQGELPQAFCRRAAVKGC 311
Query: 251 TYMLNTPIEKVLYSDDGKFEGIVTKEGTAKAPIVIADPTYFPEKCKTTGEKVIRAICITK 310
Y+L PI +L D + VT + + + ++ +T EK+ R +C+ +
Sbjct: 312 IYVLRMPITALLL-DKLILDPCVTVGLESLSSLT-------DQQNETLSEKIARGVCVIR 363
Query: 311 QPV-PNTSNA 319
V N SNA
Sbjct: 364 GSVKANVSNA 373
>SPBC15C4.03 [O] KOG1439 RAB proteins geranylgeranyltransferase component A (RAB
escort protein)
Length = 459
Score = 109 bits (273), Expect = 7e-24
Identities = 85/303 (28%), Positives = 145/303 (47%), Gaps = 42/303 (13%)
Query: 4 NYDVIVLGTGLTECILSGLLSIEGKKVLHVDRQDHYGGESSSVT---LTQLYSKFK---- 56
+YDVI++GT L ILS LS ++VLH+D YG S+T L Q+ K K
Sbjct: 6 SYDVIIVGTNLRNSILSAALSWANQRVLHIDENSFYGEIDGSLTLRDLEQINEKIKKVDS 65
Query: 57 ----------QHPLSKEDIE----SKFGKDRDWNVDLIPKFLMANGELTNILVHTDVTRY 102
+ PL + +++ K++ + P+ + A+ EL +L T + +Y
Sbjct: 66 SQILNDNGSHKSPLKRFEVQFLNKDLIPKNKGSVIQFHPQEIFASSELVKLLSETKIYKY 125
Query: 103 IEFKQVAGSYVYNRGKVY-KVPANEMEAISSSLLGIFEKRRMKKFLEWISAYNEEDIATH 161
+ K + + + KVP + + ++ L + KR + +F++++S +IA
Sbjct: 126 LLLKPARSFRLLTSNEEWIKVPESRADIFNNKNLSLASKRIVMRFMKFVS-----NIADE 180
Query: 162 QGLNLDQNTMDEVYYK-----FGLGNSTREFIGHAMALWTNDDYLQQPARPSVERIILYV 216
Q NL + + +YK F L + E I + + + D P + +++ ++ Y
Sbjct: 181 QNQNLVKEWESKPFYKFLEEVFQLSGAIEESIIYGLCQSLSKDI---PTKDALDTVLKYF 237
Query: 217 QSISRFGKSPYIYPMYGLG-ELPQGFARLSAIYGGTYMLNTPIEKVLYSDDGKFEGIVTK 275
S +G Y+ MYG G EL QGF R SA+ GGT+ML I+K+ D+ K IV K
Sbjct: 238 HSFGMYGDYSYLLAMYGTGSELCQGFCRSSAVMGGTFMLGQAIDKI---DESK---IVLK 291
Query: 276 EGT 278
+G+
Sbjct: 292 DGS 294
>Hs9966761 [TU] KOG4405 GDP dissociation inhibitor
Length = 653
Score = 107 bits (268), Expect = 3e-23
Identities = 73/294 (24%), Positives = 147/294 (49%), Gaps = 16/294 (5%)
Query: 73 RDWNVDLIPKFLMANGELTNILVHTDVTRYIEFKQVAGSYVYNRGKVYKVPANEMEAISS 132
R +N+DL+ K L + G L ++L+ ++V+RY EFK + + G+V +VP + + +S
Sbjct: 225 RRFNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGRVEQVPCSRADVFNS 284
Query: 133 SLLGIFEKRRMKKFLEWISAYNEEDIATHQGLNLDQNTMDEVYYKFGLGNSTREFIGHAM 192
L + EKR + KFL + Y E+ ++G ++ T E L + + + H++
Sbjct: 285 KQLTMVEKRMLMKFLTFCMEY-EKYPDEYKG--YEEITFYEYLKTQKLTPNLQYIVMHSI 341
Query: 193 ALWTNDDYLQQPARPSVERIIL---YVQSISRFGKSPYIYPMYGLGELPQGFARLSAIYG 249
A+ + A +++ + ++ + R+G +P+++P+YG GELPQ F R+ A++G
Sbjct: 342 AM------TSETASSTIDGLKATKNFLHCLGRYGNTPFLFPLYGQGELPQCFCRMCAVFG 395
Query: 250 GTYMLNTPIE-KVLYSDDGKFEGIVTKEG-TAKAPIVIADPTYFPEK--CKTTGEKVIRA 305
G Y L ++ V+ + K + I+ + G + + + +YFPE + ++ RA
Sbjct: 396 GIYCLRHSVQCLVVDKESRKCKAIIDQFGQRIISEHFLVEDSYFPENMCSRVQYRQISRA 455
Query: 306 ICITKQPVPNTSNADSCQIIIPQSQVGRKNDIYIATVSDAHKVTSKGHYLASVS 359
+ IT + V T + I+ ++ + + + + KG YL ++
Sbjct: 456 VLITDRSVLKTDSDQQISILTVPAEEPGTFAVRVIELCSSTMTCMKGTYLVHLT 509
Score = 53.5 bits (127), Expect = 6e-07
Identities = 43/140 (30%), Positives = 68/140 (47%), Gaps = 10/140 (7%)
Query: 1 MDENYDVIVLGTGLTECILSGLLSIEGKKVLHVDRQDHYGGESSSVTLTQLYSKFKQHPL 60
+ +DVIV+GTGL E I++ S G++VLHVD + +YGG +S + + L S K++
Sbjct: 5 LPSEFDVIVIGTGLPESIIAAACSRSGRRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQ- 63
Query: 61 SKEDIESKFGKDRDWNVDLIPKFLMANGELTNILVHTDVTRYI-----EFKQVAGSYVYN 115
DI S +D ++ ++ + T + H +V Y E + AG+ N
Sbjct: 64 ENSDIVSDSPVWQDQILENEEAIALSRKDKT--IQHVEVFCYASQDLHEDVEEAGALQKN 121
Query: 116 RGKVYKVPANEMEAISSSLL 135
V AN EA S+ L
Sbjct: 122 HALV--TSANSTEAADSAFL 139
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.136 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,862,859
Number of Sequences: 60738
Number of extensions: 1255625
Number of successful extensions: 2999
Number of sequences better than 1.0e-05: 19
Number of HSP's better than 0.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2928
Number of HSP's gapped (non-prelim): 24
length of query: 445
length of database: 30,389,216
effective HSP length: 110
effective length of query: 335
effective length of database: 23,708,036
effective search space: 7942192060
effective search space used: 7942192060
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)