ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactVI2680   good          D     KOG2186  Cell cycle control, cell division, chromosome partitioning     Cell growth-regulating nucleolar protein

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactVI2680 948000  948464 155  
         (155 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YCR087c-a [D] KOG2186 Cell growth-regulating nucleolar protein        141   4e-34
SPBC215.06c [D] KOG2186 Cell growth-regulating nucleolar protein       67   1e-11
CE01499 [D] KOG2186 Cell growth-regulating nucleolar protein           57   1e-08
Hs8923398 [D] KOG2186 Cell growth-regulating nucleolar protein         54   8e-08
At2g19380 [D] KOG2186 Cell growth-regulating nucleolar protein         51   7e-07
7303763 [D] KOG2186 Cell growth-regulating nucleolar protein           49   3e-06

>YCR087c-a [D] KOG2186 Cell growth-regulating nucleolar protein
          Length = 153

 Score =  141 bits (355), Expect = 4e-34
 Identities = 73/152 (48%), Positives = 85/152 (55%), Gaps = 4/152 (2%)

Query: 1   MVTFNCEVCNDTVPKKNTEKHYYRCPQAYYTCIDCNQTFDDGISYKKHIQCITEDEKYQK 60
           MVTFNCEVCNDTVPKKNTEKHYYRCP AYYTCIDC++TF+DG+SYK H  CI+EDEKYQK
Sbjct: 1   MVTFNCEVCNDTVPKKNTEKHYYRCPNAYYTCIDCSKTFEDGVSYKNHTSCISEDEKYQK 60

Query: 61  GLYXXXXXXXXXXXXXXXPNAQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIK 120
            LY                  Q                                   L K
Sbjct: 61  ALY----KGNKKQKQKQQQKQQQKQHQHQPVATPAKKVEKPVIKKAEKVEKTSNGIELHK 116

Query: 121 GESLYKILKSINNKDDKKELLKRLIVTAENKI 152
           G+SLYKILK++ +K  KK  LK L+V +E +I
Sbjct: 117 GKSLYKILKTMKDKGAKKTFLKSLVVDSEGQI 148


>SPBC215.06c [D] KOG2186 Cell growth-regulating nucleolar protein
          Length = 178

 Score = 67.0 bits (162), Expect = 1e-11
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 8  VCNDTVPKKNTEKHYYRCPQAYYTCIDCNQTFDDGISYKKHIQCITEDEKYQKGLY 63
          VC D + K   ++H  RC  AY+TCIDCN TF +   Y+ H  C+TE ++YQKGLY
Sbjct: 6  VCQDIIKKPKLDQHRSRCHGAYFTCIDCNTTF-ERTDYRNHTSCMTEAQRYQKGLY 60


>CE01499 [D] KOG2186 Cell growth-regulating nucleolar protein
          Length = 253

 Score = 56.6 bits (135), Expect = 1e-08
 Identities = 22/58 (37%), Positives = 35/58 (59%), Gaps = 1/58 (1%)

Query: 1  MVTFNCEVCNDTVPKKNTEKHYYRCPQAYYTCIDCNQTFDDGISYKKHIQCITEDEKY 58
          MV F+C  C +   K   E+H ++C    ++CIDC   +    +YK H++CITE++KY
Sbjct: 1  MVFFSCNNCGEACKKNQVERHLFQCRNTTFSCIDCQLVYTRE-TYKDHVKCITENQKY 57


>Hs8923398 [D] KOG2186 Cell growth-regulating nucleolar protein
          Length = 379

 Score = 53.9 bits (128), Expect = 8e-08
 Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 2/59 (3%)

Query: 1  MVTFNCEVCNDTVPKKNTEKHYYRCPQAY-YTCIDCNQTFDDGISYKKHIQCITEDEKY 58
          MV F C  C ++V K   EKH   C      +CIDC + F  G  YK H++CI+ED+KY
Sbjct: 1  MVFFTCNACGESVKKIQVEKHVSVCRNCECLSCIDCGKDFW-GDDYKNHVKCISEDQKY 58


>At2g19380 [D] KOG2186 Cell growth-regulating nucleolar protein
          Length = 849

 Score = 50.8 bits (120), Expect = 7e-07
 Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 1/58 (1%)

Query: 1  MVTFNCEVCNDTVPKKNTEKHYYRCPQAYYTCIDCNQTFDDGISYKKHIQCITEDEKY 58
          MV F C+ C + + K    +H   C    ++CIDC   F   +S   H QCITE EKY
Sbjct: 1  MVWFQCDDCGENLKKPRLPRHMSMCTATKFSCIDCGNMFGQ-VSVHYHNQCITEAEKY 57


>7303763 [D] KOG2186 Cell growth-regulating nucleolar protein
          Length = 281

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 26/61 (42%), Positives = 35/61 (56%), Gaps = 4/61 (6%)

Query: 1  MVTFNCEVCNDTVPKKNTEKHYY-RC--PQAYYTCIDCNQTFDDGISYKKHIQCITEDEK 57
          MV F C +C ++V K   EKHY  RC       +C+DC + F  G  Y  HI+CI+E +K
Sbjct: 1  MVFFTCNICGESVKKPAVEKHYQTRCRGKDKNVSCMDCLKDF-YGEEYVAHIKCISEAQK 59

Query: 58 Y 58
          Y
Sbjct: 60 Y 60


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.317    0.136    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,168,635
Number of Sequences: 60738
Number of extensions: 241027
Number of successful extensions: 2724
Number of sequences better than 1.0e-05: 6
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2713
Number of HSP's gapped (non-prelim): 9
length of query: 155
length of database: 30,389,216
effective HSP length: 97
effective length of query: 58
effective length of database: 24,497,630
effective search space: 1420862540
effective search space used: 1420862540
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)