ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI3335 good R KOG2752 General function prediction only Uncharacterized conserved protein, contains N-recognin-type Zn-finger
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI3335 1169080 1170156 359
(359 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
SPBC4.05 [R] KOG2752 Uncharacterized conserved protein contains ... 182 5e-46
7298382 [R] KOG2752 Uncharacterized conserved protein contains N... 110 2e-24
At4g23860 [R] KOG2752 Uncharacterized conserved protein contains... 103 3e-22
CE06489 [R] KOG2752 Uncharacterized conserved protein contains N... 94 4e-19
>SPBC4.05 [R] KOG2752 Uncharacterized conserved protein contains
N-recognin-type Zn-finger
Length = 329
Score = 182 bits (463), Expect = 5e-46
Identities = 128/378 (33%), Positives = 175/378 (45%), Gaps = 92/378 (24%)
Query: 3 EISVKEYVKRQEELEDEANKLMPYDPSHCTYSMGPIRQPIFACRTCNSI-----GVCYSC 57
E++VK+YV++Q ELE EA +++PY CTYSMG ++QP++AC TC VCYSC
Sbjct: 7 ELTVKQYVEQQRELEREAREVLPYSFDTCTYSMGYLKQPLYACLTCQKASGSLNAVCYSC 66
Query: 58 SIQCHSTCDLVELFDKRNFSCDCGTERQFEHGEKFTPCNIRKNTTPDIPDMSNRYGQNFK 117
SI CH+ DLV+LF+KR+F CDCGT R PCN+RK+ D N Y NF+
Sbjct: 67 SISCHADHDLVDLFNKRHFRCDCGTTRTHS-----IPCNLRKSV--DECGSENDYNHNFE 119
Query: 118 GLFCSCHREYDPNTTT-TMLQCVLGLECNEDWFHDHCILGIEENPDPVTEDRKLPGFPEL 176
G FC C Y+P T TM QC+L C EDWFH+ C+ + K P+
Sbjct: 120 GRFCICDTVYNPETEEGTMFQCIL---C-EDWFHEKCL----------QKTNKGIAIPDA 165
Query: 177 SSFEGFISWVCIDKYSSIFEKLLSHEACDKIIAHKVYRRDLVSDQNSEGMTLESTKKRGL 236
+FE + C +KY RD + +Q E + G
Sbjct: 166 ETFEWLVCSECSEKY-----------------------RDHLLNQKHESIA-------GT 195
Query: 237 EEMENSSGSYSLFLKEGYREEFKRLRDSLPEGDSLKSFFMHTAPFLTCEEKVYXXXXXXX 296
E LFL E +RE + SL++ M P L EE +Y
Sbjct: 196 ERA-------PLFLSENFRENLCPCESCI----SLRNLEM---PMLVAEEPIYEPPEDSE 241
Query: 297 XGSLVEMGE--------------------TALAQNLSHQQTLASLVAFQQIKSKLTDFLR 336
G + EM E + L Q S+ A+ ++KS+LTDFL
Sbjct: 242 DG-ISEMNEDPSESGEMIEQVISSTMNDVLRILDRLPRVQANESVYAYNRLKSELTDFLT 300
Query: 337 PFAENDKVVSESDIKQFF 354
PFA ++VV++ DI FF
Sbjct: 301 PFARENRVVTKEDISNFF 318
>7298382 [R] KOG2752 Uncharacterized conserved protein contains
N-recognin-type Zn-finger
Length = 404
Score = 110 bits (276), Expect = 2e-24
Identities = 67/164 (40%), Positives = 93/164 (55%), Gaps = 26/164 (15%)
Query: 2 SEISVKEYVKRQEELEDE-ANKLMPYDPSHCTYSMGPI-RQPIFACRTC---------NS 50
S I++ + +++++ELEDE A L D CTY+ GPI RQ +++C TC +
Sbjct: 22 STITMLDVLEQEKELEDEYAAVLGASDEKSCTYAKGPIGRQALYSCLTCCPEAREDLDKA 81
Query: 51 IGVCYSCSIQCHSTCDLVELFDKRNFSCDCGTERQFEHGEKFTPCNIRKNTTPDIP-DMS 109
GVC +CS +CH +LVEL+ KRNF CDC T+R C++ P ++
Sbjct: 82 AGVCLACSYRCHEHHELVELYTKRNFRCDCPTQR-------LGKCSLNPQVEGVQPRNVG 134
Query: 110 NRYGQNFKGLFCSCHREY-DPNTTT--TMLQCVLGLECNEDWFH 150
N Y QNF+GL+C C R Y DP+ T MLQC + C EDWFH
Sbjct: 135 NLYNQNFQGLYCKCKRPYPDPDRTVEEVMLQCAI---C-EDWFH 174
>At4g23860 [R] KOG2752 Uncharacterized conserved protein contains
N-recognin-type Zn-finger
Length = 443
Score = 103 bits (258), Expect = 3e-22
Identities = 65/183 (35%), Positives = 95/183 (51%), Gaps = 30/183 (16%)
Query: 4 ISVKEYVKRQEELEDEANKLMPYDPS-HCTYSMGPI-RQPIFACRTCN---SIGVCYSCS 58
I++ EY++R + E A+ ++ D CT+ G + RQ IF+C TC + G+C +C
Sbjct: 14 ITINEYIERLDAEELAADLVLGGDEGDECTFPKGYMKRQAIFSCITCTPEGNAGICTACC 73
Query: 59 IQCHSTCDLVELFDKRNFSCDCGTERQFEHGEKFTPCNIRKNTTPDIPDMSNRYGQNFKG 118
+ CH +L+EL+ KRNF CDCG KF + + DI + N Y NFKG
Sbjct: 74 LSCHDGHELLELWTKRNFRCDCG-------NSKFGTLACKLLPSKDIENSENSYNHNFKG 126
Query: 119 LFCSCHREY-DPNT--TTTMLQCVLGLECNEDWFHDHCI-----------LGIEENPDPV 164
L+C+C R Y DPN M+QC L C EDWFH+ + + +E +P+
Sbjct: 127 LYCTCDRPYPDPNVEEQVEMIQCCL---C-EDWFHEEHLGLTPSDSVGSQIPRDEESEPI 182
Query: 165 TED 167
ED
Sbjct: 183 YED 185
>CE06489 [R] KOG2752 Uncharacterized conserved protein contains
N-recognin-type Zn-finger
Length = 416
Score = 93.6 bits (231), Expect = 4e-19
Identities = 58/155 (37%), Positives = 83/155 (53%), Gaps = 18/155 (11%)
Query: 4 ISVKEYVKRQEELEDEANKLMP-YDPSHCTYSMG-PIRQPIFACRTCNSI----GVCYSC 57
+++ E V+ + LED+A+ L +P+ CTY+ G RQ +F C TC GVCY C
Sbjct: 83 VTLGEIVETIDYLEDKADVLFATQNPNVCTYAEGYKPRQTLFTCLTCTPAPEMAGVCYGC 142
Query: 58 SIQCHSTCDLVELFDKRNFSCDCGTERQFEHGEKFTPCNIRKNTTPDIPDMSNRYGQNFK 117
++ CH +VEL+ KR F CDCG + GEK C + ++ D + N Y N+
Sbjct: 143 ALNCHDGHIIVELYTKRKFKCDCGNSK---FGEK--KCALYED--KDAKNEYNMYNHNYN 195
Query: 118 GLFCSCHREY-DPNTTTTMLQCVLGLECNEDWFHD 151
G FC+C Y D + +LQC E EDWFH+
Sbjct: 196 GKFCTCDVFYPDEDGGKELLQC----EICEDWFHE 226
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.135 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,915,309
Number of Sequences: 60738
Number of extensions: 1051290
Number of successful extensions: 2524
Number of sequences better than 1.0e-05: 4
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2510
Number of HSP's gapped (non-prelim): 7
length of query: 359
length of database: 30,389,216
effective HSP length: 108
effective length of query: 251
effective length of database: 23,829,512
effective search space: 5981207512
effective search space used: 5981207512
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)