ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactVI3766   suspect: LH   CE    KOG0453  Amino acid transport and metabolism                            Aconitase/homoaconitase (aconitase superfamily)
r_klactVI3766   suspect: LH   CE    KOG0453  Energy production and conversion                               Aconitase/homoaconitase (aconitase superfamily)

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactVI3766 1310321  1310800 160  
         (160 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBP4H10.15 [CE] KOG0453 Aconitase/homoaconitase (aconitase supe...    80   9e-16
7293816 [J] KOG1686 Mitochondrial/chloroplast ribosomal L21 protein    56   2e-08

>SPBP4H10.15 [CE] KOG0453 Aconitase/homoaconitase (aconitase superfamily)
          Length = 905

 Score = 80.5 bits (197), Expect = 9e-16
 Identities = 50/120 (41%), Positives = 69/120 (56%), Gaps = 2/120 (1%)

Query: 35  HSVAEKAKVNLTPLKLSNELYAVFRIHNRPYLVTEGDKVILPFKLKQAEVGDVLNLTDVT 94
           HS     KV +  +K   + YA   I NR +++ +GD++ LPF LK  +VGD + L  + 
Sbjct: 787 HSGVVNQKV-IDSIKQQPDHYADAYIFNRHFVIAKGDQLGLPFHLKGVQVGDTIRLDKIA 845

Query: 95  TIGSRNFKLVDEP-IDPSLYTIKATVLEKTKRPLRVREVTKRRNRKVRHAVNKADLTILR 153
           + GSR+F L   P +DPSL+TI+A VL   K  L VR   KRR+R  R   +K   TILR
Sbjct: 846 SFGSRDFTLFGNPYVDPSLFTIEAVVLSFPKSALSVRVKHKRRHRHDRVMKHKQTYTILR 905


>7293816 [J] KOG1686 Mitochondrial/chloroplast ribosomal L21 protein
          Length = 196

 Score = 56.2 bits (134), Expect = 2e-08
 Identities = 36/107 (33%), Positives = 60/107 (55%), Gaps = 2/107 (1%)

Query: 54  LYAVFRIHNRPYLVTEGDKVILPFKLKQAEVGDVLNLTDVTTIGSRNFKLVDEPI-DPSL 112
           L+AV  +  + + VT GD +IL        +GD ++L  V   G+R+F LV  PI +P L
Sbjct: 78  LFAVVHLCGKQFKVTPGD-IILVEGYWPPTIGDEISLDKVLLAGARDFTLVGRPILEPGL 136

Query: 113 YTIKATVLEKTKRPLRVREVTKRRNRKVRHAVNKADLTILRISELKV 159
             +KATV+EKT    +     KRR + +R    ++  T++RI+ +++
Sbjct: 137 ILVKATVVEKTLSHTKTHFRKKRRKQYMRINFQRSPHTMVRINSIEL 183


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.322    0.137    0.380 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,212,734
Number of Sequences: 60738
Number of extensions: 303574
Number of successful extensions: 765
Number of sequences better than 1.0e-05: 2
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 762
Number of HSP's gapped (non-prelim): 2
length of query: 160
length of database: 30,389,216
effective HSP length: 98
effective length of query: 62
effective length of database: 24,436,892
effective search space: 1515087304
effective search space used: 1515087304
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)