ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI3809 suspect: LH S KOG4415 Function unknown Uncharacterized conserved protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI3809 1331407 1332258 284
(284 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
7292701_2 [S] KOG4415 Uncharacterized conserved protein 49 8e-06
7292482_1 [DT] KOG4156 Claspin protein mediating phosphorylation... 49 8e-06
>7292701_2 [S] KOG4415 Uncharacterized conserved protein
Length = 1643
Score = 48.9 bits (115), Expect = 8e-06
Identities = 58/260 (22%), Positives = 111/260 (42%), Gaps = 25/260 (9%)
Query: 29 ISDEETEEQLAKPLKFKLKRNKQVPLVEEYTNDDDYSTLFEQPAGTKPRNTKETINVLNL 88
I ++E EE+L K K K K+ ++ L EE + + ++ + K+ L
Sbjct: 773 IKEKEREEKL-KEEKIKEKQREE-KLKEEKLKEKEREERMKEKEREEKAKEKQREEKLRE 830
Query: 89 EDLEGSEEEQN-----------EPPKYTKKVQNRSQLVSEKKVNEKTYVKLLSNQDKDDL 137
E ++ E E+ E K K + R + + EK+ EK K + K+
Sbjct: 831 EKIKEKEREEKLKEKLREEKIKEKEKEEKLRKEREEKMREKEREEKIKEKERVEKIKEKE 890
Query: 138 RELGITAQADIYAEEDDQLLMDNSLQDERLALGDKEKQLMQQRKRKEIEQLISLHDEETV 197
RE + + + +E ++LL +++ KEK+ ++ K KE E+ + EE
Sbjct: 891 REEKLKKEKEEKLKEKEELLKKKEKEEKEREEKLKEKERQEKLKEKEREEKLKRETEERQ 950
Query: 198 LPQEIQELDKISGQKTVLLPRLQPEQKWEDIYQELSEYAASQRDRDTLSSKRIEILSQQL 257
+E +E K ++ L L+ E K ++ ++L E K +++ ++
Sbjct: 951 REKEREEKLK-EKERAEKLKDLEKEVKLKEKEEQLKE-----------KEKELKLKEKKE 998
Query: 258 QDLTLKKETFLEEMKQIASS 277
+D +KE LE K + S+
Sbjct: 999 KDKVKEKEKSLESEKLLISA 1018
>7292482_1 [DT] KOG4156 Claspin protein mediating phosphorylation and
activation of Chk1 protein kinase in the DNA replication
checkpoint response
Length = 1511
Score = 48.9 bits (115), Expect = 8e-06
Identities = 50/219 (22%), Positives = 101/219 (45%), Gaps = 27/219 (12%)
Query: 31 DEETEEQLAKPL-KFKLKRNKQVPLVEEYTNDDDYST---LFEQPAGTKPRNTKETINVL 86
D TE++ KP K K K++ + + N++D ++++ + + TK++
Sbjct: 237 DNGTEQEKKKPSPKSKAKKSDKSKIDSLMDNEEDAGEDLKMYQEDQEPQKQKTKKSAKKT 296
Query: 87 NLEDLE--GSEEEQNEPPKYTKKV--------QNRSQLVSEKKVNEKTYVKLLSNQDKDD 136
N + E G ++E E K KK+ +++ Q+V KK+ +K K+LS+ + ++
Sbjct: 297 NKDSKEESGEDQEHQEQKKPLKKIKLDNIDTKEDKEQIVKPKKMAKKNKQKVLSDDESEE 356
Query: 137 LRELGITAQADIYAEEDDQLLMDNSLQDERLALGDKEKQLMQQ--RKRKEIEQLISLHDE 194
+ + + D L S ++E DKE Q MQ+ +K K+ +Q + E
Sbjct: 357 NQNEKV---------DQDHDLKKMSSENELEMGSDKEDQEMQEPPKKAKKNKQRMDSESE 407
Query: 195 ETVLPQEIQELDKISGQKTVLLPRLQPEQKWEDIYQELS 233
+ + E +++ S K L + E + E+ +E+S
Sbjct: 408 DEIPKTESEKI--TSSPKNKLKGLVDSESEPEETAEEVS 444
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.306 0.127 0.328
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,151,667
Number of Sequences: 60738
Number of extensions: 788811
Number of successful extensions: 3536
Number of sequences better than 1.0e-05: 2
Number of HSP's better than 0.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3528
Number of HSP's gapped (non-prelim): 4
length of query: 284
length of database: 30,389,216
effective HSP length: 105
effective length of query: 179
effective length of database: 24,011,726
effective search space: 4298098954
effective search space used: 4298098954
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)