ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI3909 good C KOG1758 Energy production and conversion Mitochondrial F1F0-ATP synthase, subunit delta/ATP16
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI3909 1366502 1366978 159
(159 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YDL004w [C] KOG1758 Mitochondrial F1F0-ATP synthase subunit delt... 165 3e-41
SPBC13E7.04 [C] KOG1758 Mitochondrial F1F0-ATP synthase subunit ... 80 1e-15
7291126 [C] KOG1758 Mitochondrial F1F0-ATP synthase subunit delt... 73 1e-13
At5g47030 [C] KOG1758 Mitochondrial F1F0-ATP synthase subunit de... 71 5e-13
CE01976 [C] KOG1758 Mitochondrial F1F0-ATP synthase subunit delt... 69 3e-12
Hs4502297 [C] KOG1758 Mitochondrial F1F0-ATP synthase subunit de... 59 3e-09
>YDL004w [C] KOG1758 Mitochondrial F1F0-ATP synthase subunit delta/ATP16
Length = 160
Score = 165 bits (417), Expect = 3e-41
Identities = 87/137 (63%), Positives = 107/137 (77%), Gaps = 3/137 (2%)
Query: 1 MFRLSAARTLAKSVNTVVAKRTYAEAA--DGALKLQFALPHQTLFSGTPVTQVNLPAKSG 58
M R ++ ++S+N VAKR+YAEAA LKLQFALPH+TL+SG+ VTQVNLPAKSG
Sbjct: 1 MLRSIIGKSASRSLN-FVAKRSYAEAAAASSGLKLQFALPHETLYSGSEVTQVNLPAKSG 59
Query: 59 QIGILANHVPTVEQLVPGVVEVLEXXXXXXXXXXXXXATVQPDSTLAITSVEAFPLESFS 118
+IG+LANHVPTVEQL+PGVVEV+E ATVQPDS L +T++EAFPLESFS
Sbjct: 60 RIGVLANHVPTVEQLLPGVVEVMEGSNSKKFFISGGFATVQPDSQLCVTAIEAFPLESFS 119
Query: 119 PENVRSLLAEAQKNVSS 135
EN+++LLAEA+KNVSS
Sbjct: 120 QENIKNLLAEAKKNVSS 136
>SPBC13E7.04 [C] KOG1758 Mitochondrial F1F0-ATP synthase subunit delta/ATP16
Length = 160
Score = 79.7 bits (195), Expect = 1e-15
Identities = 46/118 (38%), Positives = 67/118 (55%), Gaps = 3/118 (2%)
Query: 21 RTYAEAA--DGALKLQFALPHQTLFSGTPVTQVNLPAKSGQIGILANHVPTVEQLVPGVV 78
R YA+A + L L ALP+QT++ PVTQV++PA+ G++GIL +HVP ++ L PGV+
Sbjct: 19 RGYAQAVQKNEKLVLSMALPYQTIYEKVPVTQVDIPAEDGEMGILKDHVPMIQCLKPGVI 78
Query: 79 EVL-EXXXXXXXXXXXXXATVQPDSTLAITSVEAFPLESFSPENVRSLLAEAQKNVSS 135
V E A QP + L+IT EA+ LE FS LL + + ++S
Sbjct: 79 SVTDESSNKSKYFISGGFAVQQPSNELSITVPEAYKLEDFSSSVANQLLEKHKAEMNS 136
>7291126 [C] KOG1758 Mitochondrial F1F0-ATP synthase subunit delta/ATP16
Length = 157
Score = 73.2 bits (178), Expect = 1e-13
Identities = 45/130 (34%), Positives = 67/130 (50%), Gaps = 5/130 (3%)
Query: 7 ARTLAKSVNTVVAKRTYAEAADGALKLQFALPHQTLFSGTPVTQVNLPAKSGQIGILANH 66
AR LA + R+Y++ +KL FA ++T + V Q+++P+ SG GILA H
Sbjct: 7 ARLLAARGARLAQNRSYSDE----MKLTFAAANKTFYDAAVVRQIDVPSFSGSFGILAKH 62
Query: 67 VPTVEQLVPGVVEVLE-XXXXXXXXXXXXXATVQPDSTLAITSVEAFPLESFSPENVRSL 125
VPT+ L PGVV+V+E TV DS++ + + EA +E R L
Sbjct: 63 VPTLAVLKPGVVQVVENDGKTLKFFVSSGSVTVNEDSSVQVLAEEAHNIEDIDANEARQL 122
Query: 126 LAEAQKNVSS 135
LA+ Q +SS
Sbjct: 123 LAKYQSQLSS 132
>At5g47030 [C] KOG1758 Mitochondrial F1F0-ATP synthase subunit delta/ATP16
Length = 203
Score = 71.2 bits (173), Expect = 5e-13
Identities = 37/105 (35%), Positives = 57/105 (54%)
Query: 31 LKLQFALPHQTLFSGTPVTQVNLPAKSGQIGILANHVPTVEQLVPGVVEVLEXXXXXXXX 90
L + F LP+ + +G V V +PA +GQ+G+L HVPT+ +L PG++ V E
Sbjct: 73 LTVNFVLPYTSELTGKEVDMVIIPASTGQMGVLPGHVPTIAELKPGIMSVHEGTDVKKYF 132
Query: 91 XXXXXATVQPDSTLAITSVEAFPLESFSPENVRSLLAEAQKNVSS 135
A + +S I +VEA PL+ P V+ LAE Q+ ++S
Sbjct: 133 LSSGFAFLHANSVADIIAVEAVPLDHIDPSQVQKGLAEFQQKLAS 177
>CE01976 [C] KOG1758 Mitochondrial F1F0-ATP synthase subunit delta/ATP16
Length = 163
Score = 68.9 bits (167), Expect = 3e-12
Identities = 47/132 (35%), Positives = 65/132 (48%), Gaps = 9/132 (6%)
Query: 7 ARTLAKSVNTVVAKRTYAEAADGA------LKLQFALPHQTLFSGTPVTQVNLPAKSGQI 60
ART+ + +VVAKR YA AA A L+L FA P +FS V QV++P +G +
Sbjct: 3 ARTIQRF--SVVAKRGYAAAAPAANANPEELRLTFASPDTAVFSNAVVKQVDVPTLAGMV 60
Query: 61 GILANHVPTVEQLVPGVVEV-LEXXXXXXXXXXXXXATVQPDSTLAITSVEAFPLESFSP 119
G+LANHVPT+ L PGVV V +V D + + + E +E
Sbjct: 61 GVLANHVPTIGVLKPGVVSVTTNEGTVQRLFVSSGTLSVNIDGSCQVLAEEVLKVEEIDE 120
Query: 120 ENVRSLLAEAQK 131
R+ L AQ+
Sbjct: 121 SAARAELDAAQR 132
>Hs4502297 [C] KOG1758 Mitochondrial F1F0-ATP synthase subunit delta/ATP16
Length = 168
Score = 58.9 bits (141), Expect = 3e-09
Identities = 40/119 (33%), Positives = 56/119 (46%), Gaps = 9/119 (7%)
Query: 21 RTYAEAA--------DGALKLQFALPHQTLFSGTPVTQVNLPAKSGQIGILANHVPTVEQ 72
R YAEAA + FA P Q F+G V QV++P +G GILA HVPT++
Sbjct: 20 RAYAEAAAAPAAASGPNQMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQV 79
Query: 73 LVPGVVEV-LEXXXXXXXXXXXXXATVQPDSTLAITSVEAFPLESFSPENVRSLLAEAQ 130
L PG+V V E V DS++ + + EA L+ ++ L +AQ
Sbjct: 80 LRPGLVVVHAEDGTTSKYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQ 138
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.313 0.127 0.334
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,604,422
Number of Sequences: 60738
Number of extensions: 165083
Number of successful extensions: 297
Number of sequences better than 1.0e-05: 6
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 288
Number of HSP's gapped (non-prelim): 6
length of query: 159
length of database: 30,389,216
effective HSP length: 98
effective length of query: 61
effective length of database: 24,436,892
effective search space: 1490650412
effective search space used: 1490650412
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)