ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactVI4027 check: MH U KOG0936 Intracellular trafficking, secretion, and vesicular transport Clathrin adaptor complex, small subunit

Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactVI4027 Similar to YJL024c SP|P47064 APS3 AP-3 complex
subunit, sigma3 subunit, 22 KD {P3.84.f3.1} [INTRON]
         (172 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   
Score E Sequences producing significant alignments: (bits) Value YJL024c [U] KOG0936 Clathrin adaptor complex small subunit 241 5e-64 Hs4502861 [U] KOG0936 Clathrin adaptor complex small subunit 125 2e-29 SPAC30D11.05 [U] KOG0936 Clathrin adaptor complex small subunit 119 2e-27 Hs5031581 [U] KOG0936 Clathrin adaptor complex small subunit 119 3e-27 At3g50860 [U] KOG0936 Clathrin adaptor complex small subunit 112 2e-25 7291698 [U] KOG0936 Clathrin adaptor complex small subunit 104 7e-23 SPBC685.04c [U] KOG0935 Clathrin adaptor complex small subunit 101 6e-22 HsM5901934 [U] KOG0934 Clathrin adaptor complex small subunit 86 2e-17 Hs22066144 [U] KOG0934 Clathrin adaptor complex small subunit 82 3e-16 Hs22027655 [U] KOG0934 Clathrin adaptor complex small subunit 82 3e-16 Hs4557471 [U] KOG0934 Clathrin adaptor complex small subunit 80 1e-15 SPAP27G11.06c [U] KOG0934 Clathrin adaptor complex small subunit 79 2e-15 Hs18551999 [U] KOG0934 Clathrin adaptor complex small subunit 79 2e-15 At2g19790 [U] KOG0934 Clathrin adaptor complex small subunit 77 9e-15 7301077 [U] KOG0934 Clathrin adaptor complex small subunit 77 9e-15 At4g35410 [U] KOG0934 Clathrin adaptor complex small subunit 75 3e-14 At2g17380 [U] KOG0934 Clathrin adaptor complex small subunit 75 4e-14 At1g47830 [U] KOG0935 Clathrin adaptor complex small subunit 75 4e-14 CE09797 [U] KOG0934 Clathrin adaptor complex small subunit 74 7e-14 Hs16950628 [U] KOG0934 Clathrin adaptor complex small subunit 72 4e-13 7300728 [U] KOG0935 Clathrin adaptor complex small subunit 72 5e-13 Hs4757996 [U] KOG0935 Clathrin adaptor complex small subunit 70 2e-12 CE07018 [U] KOG0935 Clathrin adaptor complex small subunit 66 3e-11 Hs21361394 [U] KOG0934 Clathrin adaptor complex small subunit 63 2e-10 YJR058c [U] KOG0935 Clathrin adaptor complex small subunit 63 2e-10 YLR170c [U] KOG0934 Clathrin adaptor complex small subunit 60 1e-09 ECU08g0150 [U] KOG0934 Clathrin adaptor complex small subunit 45 5e-05 Hs7706337 [U] KOG3343 Vesicle coat complex COPI zeta subunit 45 6e-05 Hs7705983 [U] KOG3343 Vesicle coat complex COPI zeta subunit 42 5e-04 Hs11038643 [U] KOG0935 Clathrin adaptor complex small subunit 42 5e-04 7294073 [U] KOG3343 Vesicle coat complex COPI zeta subunit 38 0.008 Hs20539280 [U] KOG0934 Clathrin adaptor complex small subunit 37 0.013 At3g09800 [U] KOG3343 Vesicle coat complex COPI zeta subunit 37 0.017 CE11494 [U] KOG3343 Vesicle coat complex COPI zeta subunit 36 0.023 At1g60970 [U] KOG3343 Vesicle coat complex COPI zeta subunit 36 0.023 YPL010w [U] KOG3343 Vesicle coat complex COPI zeta subunit 34 0.11 SPAC31A2.09c [U] KOG0938 Adaptor complexes medium subunit family 32 0.43 YOL034w [BDL] KOG0979 Structural maintenance of chromosome prote... 31 0.73 SPAC18G6.11c [K] KOG2434 RNA polymerase I transcription factor 31 0.73 YOL018c [U] KOG0809 SNARE protein TLG2/Syntaxin 16 31 0.95 Hs4557659 [R] KOG3867 Sulfatase 31 0.95 CE17473 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA... 30 1.2 At4g08520 [U] KOG3343 Vesicle coat complex COPI zeta subunit 30 1.2 At1g46408 [K] KOG0014 MADS box transcription factor 30 1.6 Hs7305303 [R] KOG1917 Membrane-associated hematopoietic protein 30 2.1 7302648 [T] KOG1023 Natriuretic peptide receptor guanylate cyclase 30 2.1 Hs20357498 [Z] KOG0516 Dystonin GAS (Growth-arrest-specific prot... 29 2.8 Hs10864047 [TU] KOG0998 Synaptic vesicle protein EHS-1 and relat... 29 2.8 7290211 [U] KOG2635 Medium subunit of clathrin adaptor complex 29 2.8 7291221_2 [T] KOG2607 CDK5 activator-binding protein 29 2.8 SPAC26F1.09 [R] KOG1102 Rab6 GTPase activator GAPCenA and relate... 29 3.6 Hs15011904 [Z] KOG0516 Dystonin GAS (Growth-arrest-specific prot... 29 3.6 CE16167 [S] KOG0915 Uncharacterized conserved protein 29 3.6 CE04499 [I] KOG1362 Choline transporter-like protein 29 3.6 CE00639 [S] KOG0915 Uncharacterized conserved protein 29 3.6 7301133 [T] KOG4369 RTK signaling protein MASK/UNC-44 29 3.6 At3g02650_2 [R] KOG4197 FOG: PPR repeat 29 3.6 Hs7705348 [Z] KOG0247 Kinesin-like protein 28 4.7 Hs4557625 [H] KOG3754 Gamma-glutamylcysteine synthetase 28 4.7 Hs4504949 [W] KOG1836 Extracellular matrix glycoprotein Laminin ... 28 4.7 Hs22059693 [R] KOG1721 FOG: Zn-finger 28 4.7 SPBC1703.07 [C] KOG1254 ATP-citrate lyase 28 6.2 Hs20538447 [IR] KOG0059 Lipid exporter ABCA1 and related protein... 28 6.2 CE04654 [U] KOG2740 Clathrin-associated protein medium chain 28 6.2 Hs22045273 [Z] KOG0035 Ca2+-binding actin-bundling protein (acti... 28 8.0 CE29072 [DR] KOG1987 Speckle-type POZ protein SPOP and related p... 28 8.0 CE27057 [DR] KOG1987 Speckle-type POZ protein SPOP and related p... 28 8.0 At1g03270 [S] KOG2118 Predicted membrane protein contains two CB... 28 8.0 7304120 [OT] KOG1497 COP9 signalosome subunit CSN4 28 8.0 >YJL024c [U] KOG0936 Clathrin adaptor complex small subunit Length = 194 Score = 241 bits (614), Expect = 5e-64 Identities = 125/179 (69%), Positives = 145/179 (80%), Gaps = 7/179 (3%) Query: 1 MIKFYTPVEVEKQTLLLQQVYELISQRNSQVQSSFLVTPPSLLM------DSGDNEDIQI 54 ++KFYTPV++ KQ LLL+QVYELISQRNS QSSFLVTPPSLL+ D +NEDIQI Sbjct: 16 LVKFYTPVDLPKQKLLLEQVYELISQRNSDFQSSFLVTPPSLLLSNENNNDEVNNEDIQI 75 Query: 55 IYKNYATLYFTFIVDEQESELAILDLIQTFVEALDKCFEEVNELDLIFNWQTLESVLEEI 114 IYKNYATLYFTFIVD+QESELAILDLIQTFVE+LD+CF EVNELDLIFNWQTLESVLEEI Sbjct: 76 IYKNYATLYFTFIVDDQESELAILDLIQTFVESLDRCFTEVNELDLIFNWQTLESVLEEI 135 Query: 115 IQGGLVIETNVRKIVSAVDELNNANESENS-FTKLAGNRISEAFQAFSYSNFSAWGSHQ 172 +QGG+VIETNV +IV++VDELN A ES +S +L A QAF+ F+ W + Q Sbjct: 136 VQGGMVIETNVNRIVASVDELNKAAESTDSKIGRLTSTGFGSALQAFAQGGFAQWATGQ 194 >Hs4502861 [U] KOG0936 Clathrin adaptor complex small subunit Length = 193 Score = 125 bits (315), Expect = 2e-29 Identities = 66/140 (47%), Positives = 94/140 (67%), Gaps = 6/140 (4%) Query: 3 KFYTPVEVEKQTLLLQQVYELISQRNSQVQSSFLVTPPSLLMDSGDNEDIQIIYKNYATL 62 KFY P + Q ++++ + L+S+R+ V +FL LL+ DN+ +IY++YATL Sbjct: 18 KFYQPYSEDTQQQIIRETFHLVSKRDENV-CNFL--EGGLLIGGSDNK---LIYRHYATL 71 Query: 63 YFTFIVDEQESELAILDLIQTFVEALDKCFEEVNELDLIFNWQTLESVLEEIIQGGLVIE 122 YF F VD ESEL ILDLIQ FVE LDKCFE V ELDLIF+ + ++L E++ GG+V+E Sbjct: 72 YFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHNILAEMVMGGMVLE 131 Query: 123 TNVRKIVSAVDELNNANESE 142 TN+ +IV+ +D N +SE Sbjct: 132 TNMNEIVTQIDAQNKLEKSE 151 >SPAC30D11.05 [U] KOG0936 Clathrin adaptor complex small subunit Length = 165 Score = 119 bits (298), Expect = 2e-27 Identities = 64/131 (48%), Positives = 88/131 (66%), Gaps = 8/131 (6%) Query: 1 MIKFYTPVEVEKQTLLLQQVYELISQRNSQVQSSFLVTPPSLLMDSGDNEDIQIIYKNYA 60 + KFYTP++ Q L+ +Y +S R +FL + + +G N +IIY+ YA Sbjct: 16 LTKFYTPIDESIQQKLIGDIYAAVSTR-PPTACNFLESN----LIAGKN---RIIYRQYA 67 Query: 61 TLYFTFIVDEQESELAILDLIQTFVEALDKCFEEVNELDLIFNWQTLESVLEEIIQGGLV 120 TLYF F+VDE ESEL ILDLIQ FVEALD+CF V ELDL+F +Q + ++L E++ GGLV Sbjct: 68 TLYFVFVVDEGESELGILDLIQVFVEALDRCFNNVCELDLVFKFQEIHAILAEVVSGGLV 127 Query: 121 IETNVRKIVSA 131 +ETN+ +IV A Sbjct: 128 LETNLNEIVLA 138 >Hs5031581 [U] KOG0936 Clathrin adaptor complex small subunit Length = 193 Score = 119 bits (297), Expect = 3e-27 Identities = 61/154 (39%), Positives = 96/154 (61%), Gaps = 6/154 (3%) Query: 1 MIKFYTPVEVEKQTLLLQQVYELISQRNSQVQSSFLVTPPSLLMDSGDNEDIQIIYKNYA 60 +++FY E Q ++++ + L+ +R+ + + + SL+ S D ++IY++YA Sbjct: 16 LVRFYQRFPEEIQQQIVRETFHLVLKRDDNICN--FLEGGSLIGGS----DYKLIYRHYA 69 Query: 61 TLYFTFIVDEQESELAILDLIQTFVEALDKCFEEVNELDLIFNWQTLESVLEEIIQGGLV 120 TLYF F VD ESEL ILDLIQ FVE LDKCFE V ELDLIF+ + +L+E++ GG+V Sbjct: 70 TLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHMDKVHYILQEVVMGGMV 129 Query: 121 IETNVRKIVSAVDELNNANESENSFTKLAGNRIS 154 +ETN+ +IV+ ++ N +SE + +S Sbjct: 130 LETNMNEIVAQIEAQNRLEKSEGGLSAAPARAVS 163 >At3g50860 [U] KOG0936 Clathrin adaptor complex small subunit Length = 145 Score = 112 bits (281), Expect = 2e-25 Identities = 59/136 (43%), Positives = 91/136 (66%), Gaps = 7/136 (5%) Query: 1 MIKFYTPVEVEKQTLLLQQVYELISQRNSQVQSSFLVTPPSLLMDSGDNEDIQIIYKNYA 60 + KFY + VEKQ L++ V+ ++ R V S+FL ++S D +++YK+YA Sbjct: 16 LAKFYDYLPVEKQQELIRGVFSVLCSRPENV-SNFLE------IESLFGPDSRLVYKHYA 68 Query: 61 TLYFTFIVDEQESELAILDLIQTFVEALDKCFEEVNELDLIFNWQTLESVLEEIIQGGLV 120 TLYF + D E+ELA+LDLIQ VE LDKCF V ELD++FN+ + +VL+EI+ GG V Sbjct: 69 TLYFVLVFDGSENELAMLDLIQVLVETLDKCFSNVCELDIVFNYSKMHAVLDEIVFGGQV 128 Query: 121 IETNVRKIVSAVDELN 136 +ET+ +++ AV+E++ Sbjct: 129 LETSSAEVMKAVEEIS 144 >7291698 [U] KOG0936 Clathrin adaptor complex small subunit Length = 210 Score = 104 bits (259), Expect = 7e-23 Identities = 61/171 (35%), Positives = 94/171 (54%), Gaps = 25/171 (14%) Query: 3 KFYTPVEVEKQTLLLQQVYELISQRNSQVQSSFLVTPPSLLMDSGDNEDIQIIYKNYATL 62 KFY + Q ++++ ++L+S+R+ V + + SL+ S D ++IY++YATL Sbjct: 18 KFYQYFDESLQQQIIKETFQLVSKRDDNVCN--FLEGGSLIGGS----DYKLIYRHYATL 71 Query: 63 YFTFIVDEQESELAILDLIQTFVEALDKCFEEVNELDLIFNWQTLESVL----------- 111 YF F VD ESEL ILDLIQ FVE LDKCFE V ELDLIF+ + +L Sbjct: 72 YFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHADAVHHILSGWESYFGNPF 131 Query: 112 --------EEIIQGGLVIETNVRKIVSAVDELNNANESENSFTKLAGNRIS 154 E++ GG+V++TN+ I++ ++E N + E + +S Sbjct: 132 RFSYHEFVSELVMGGMVLQTNMNDIMARIEEQNKIVKQEAGISAAPARAVS 182 >SPBC685.04c [U] KOG0935 Clathrin adaptor complex small subunit Length = 143 Score = 101 bits (251), Expect = 6e-22 Identities = 51/133 (38%), Positives = 86/133 (64%), Gaps = 11/133 (8%) Query: 3 KFYTPVEVEKQTLLLQQVYELISQRNSQVQSSFLVTPPSLLMDSGDNEDIQIIYKNYATL 62 K+Y P + +++ L ++++LISQRN + Q++FL + E+ +++Y+ YA L Sbjct: 18 KYYVPFDDDEKVRLKARIHQLISQRNQKFQANFL-----------EWENSKLVYRRYAGL 66 Query: 63 YFTFIVDEQESELAILDLIQTFVEALDKCFEEVNELDLIFNWQTLESVLEEIIQGGLVIE 122 YF F VD +++LAIL++I FVE LD F V ELDLIFN+ + ++L+EII GG + E Sbjct: 67 YFCFCVDSTDNDLAILEMIHFFVEILDSFFGNVCELDLIFNFYKVSAILDEIILGGEIGE 126 Query: 123 TNVRKIVSAVDEL 135 +N + ++ ++ L Sbjct: 127 SNKKSVLERIEAL 139 >HsM5901934 [U] KOG0934 Clathrin adaptor complex small subunit Length = 144 Score = 85.9 bits (211), Expect = 2e-17 Identities = 46/139 (33%), Positives = 84/139 (60%), Gaps = 12/139 (8%) Query: 3 KFYTPVEVEKQTLLLQQVYELISQRNSQVQSSFLVTPPSLLMDSGDNEDIQIIYKNYATL 62 K+Y V++ K+TLL +V + R+++ Q SF+ + +D ++IY+ YA L Sbjct: 18 KYYEHVDINKRTLLETEVIKSCLSRSNE-QCSFI-----------EYKDFKLIYRQYAAL 65 Query: 63 YFTFIVDEQESELAILDLIQTFVEALDKCFEEVNELDLIFNWQTLESVLEEIIQGGLVIE 122 + V++ E+E+AI + I FVE LD+ F V+ELD++FN + +L+E++ G ++E Sbjct: 66 FIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDIMFNLDKVHIILDEMVLNGCIVE 125 Query: 123 TNVRKIVSAVDELNNANES 141 TN +I++ + L+ +ES Sbjct: 126 TNRARILAPLLILDKMSES 144 >Hs22066144 [U] KOG0934 Clathrin adaptor complex small subunit Length = 269 Score = 82.4 bits (202), Expect = 3e-16 Identities = 43/138 (31%), Positives = 83/138 (59%), Gaps = 12/138 (8%) Query: 3 KFYTPVEVEKQTLLLQQVYELISQRNSQVQSSFLVTPPSLLMDSGDNEDIQIIYKNYATL 62 K+Y P+ +++ + +++ + + R ++ SFL + D++I+YK YA+L Sbjct: 126 KWYVPLSDKEKKKITRELVQTVLARKPKM-CSFL-----------EWRDLKIVYKRYASL 173 Query: 63 YFTFIVDEQESELAILDLIQTFVEALDKCFEEVNELDLIFNWQTLESVLEEIIQGGLVIE 122 YF +++Q++EL L++I +VE LDK F V ELD+IFN++ +L+E + GG V E Sbjct: 174 YFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGGEVQE 233 Query: 123 TNVRKIVSAVDELNNANE 140 T+ + ++ A+++ + E Sbjct: 234 TSKKNVLKAIEQADLLQE 251 >Hs22027655 [U] KOG0934 Clathrin adaptor complex small subunit Length = 157 Score = 82.4 bits (202), Expect = 3e-16 Identities = 43/138 (31%), Positives = 83/138 (59%), Gaps = 12/138 (8%) Query: 3 KFYTPVEVEKQTLLLQQVYELISQRNSQVQSSFLVTPPSLLMDSGDNEDIQIIYKNYATL 62 K+Y P+ +++ + +++ + + R ++ SFL + D++I+YK YA+L Sbjct: 17 KWYVPLSDKEKKKITRELVQTVLARKPKM-CSFL-----------EWRDLKIVYKRYASL 64 Query: 63 YFTFIVDEQESELAILDLIQTFVEALDKCFEEVNELDLIFNWQTLESVLEEIIQGGLVIE 122 YF +++Q++EL L++I +VE LDK F V ELD+IFN++ +L+E + GG V E Sbjct: 65 YFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGGEVQE 124 Query: 123 TNVRKIVSAVDELNNANE 140 T+ + ++ A+++ + E Sbjct: 125 TSKKNVLKAIEQADLLQE 142 >Hs4557471 [U] KOG0934 Clathrin adaptor complex small subunit Length = 158 Score = 80.5 bits (197), Expect = 1e-15 Identities = 36/94 (38%), Positives = 63/94 (66%) Query: 51 DIQIIYKNYATLYFTFIVDEQESELAILDLIQTFVEALDKCFEEVNELDLIFNWQTLESV 110 D++++YK YA+LYF ++ Q++EL L+LI +VE LDK F V ELD+IFN++ + Sbjct: 54 DLKVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFI 113 Query: 111 LEEIIQGGLVIETNVRKIVSAVDELNNANESENS 144 L+E + GG V +T+ + ++ A+++ + E + S Sbjct: 114 LDEFLMGGDVQDTSKKSVLKAIEQADLLQEEDES 147 >SPAP27G11.06c [U] KOG0934 Clathrin adaptor complex small subunit Length = 162 Score = 79.3 bits (194), Expect = 2e-15 Identities = 51/156 (32%), Positives = 88/156 (55%), Gaps = 6/156 (3%) Query: 2 IKFYTPVEVEKQTLLLQQVYELISQRNSQV---QSSFLVTPPSLLMDSGDNEDIQIIYKN 58 IKF+ V + + L + L + +++ SS ++T + + + + +I+Y+ Sbjct: 3 IKFFLLVSRQGKVRLAKWFNTLSIKERAKIIRDVSSLVITRKPKMCNFVEYKGEKIVYRR 62 Query: 59 YATLYFTFIVDEQESELAILDLIQTFVEALDKCFEEVNELDLIFNWQTLESVLEEIIQGG 118 YA+L+F +++ ++EL IL++I FVE LDK F V ELDLIFN++ V+EE++ G Sbjct: 63 YASLFFVCGIEQDDNELIILEVIHKFVECLDKYFGNVCELDLIFNFEKAYYVMEELLLAG 122 Query: 119 LVIE---TNVRKIVSAVDELNNANESENSFTKLAGN 151 + E TNV V A D + A+ ++S KL G+ Sbjct: 123 ELQESSKTNVLSAVLAGDAESEADAQQDSLQKLVGS 158 >Hs18551999 [U] KOG0934 Clathrin adaptor complex small subunit Length = 164 Score = 79.3 bits (194), Expect = 2e-15 Identities = 43/142 (30%), Positives = 84/142 (58%), Gaps = 12/142 (8%) Query: 3 KFYTPVEVEKQTLLLQQVYELISQRNSQVQSSFLVTPPSLLMDSGDNEDIQIIYKNYATL 62 K+Y + +++ + +++ ++I R + SSF+ D ++++++YK YA+L Sbjct: 18 KWYITLPDKERKKITREIVQIILSRGHRT-SSFV-----------DWKELKLVYKRYASL 65 Query: 63 YFTFIVDEQESELAILDLIQTFVEALDKCFEEVNELDLIFNWQTLESVLEEIIQGGLVIE 122 YF ++ Q++EL L+++ +VE LDK F V ELD+IFN++ +L+E I GG + E Sbjct: 66 YFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIGGEIQE 125 Query: 123 TNVRKIVSAVDELNNANESENS 144 T+ + V A+++ + E+ S Sbjct: 126 TSKKIAVKAIEDSDMLQENRLS 147 >At2g19790 [U] KOG0934 Clathrin adaptor complex small subunit Length = 143 Score = 77.4 bits (189), Expect = 9e-15 Identities = 43/139 (30%), Positives = 80/139 (56%), Gaps = 12/139 (8%) Query: 1 MIKFYTPVEVEKQTLLLQQVYELISQRNSQVQSSFLVTPPSLLMDSGDNEDIQIIYKNYA 60 + ++Y + +E++ L ++ RN Q Q SF+ ++ + +I+Y+ YA Sbjct: 17 LAQYYEWLTLEERRALEGEIVRKCLARNDQ-QCSFV-----------EHRNYKIVYRRYA 64 Query: 61 TLYFTFIVDEQESELAILDLIQTFVEALDKCFEEVNELDLIFNWQTLESVLEEIIQGGLV 120 +L+F VD+ E+ELAIL+ I VE +DK F V ELD++F+ + +LEE++ G + Sbjct: 65 SLFFMVGVDDDENELAILEFIHLLVETMDKHFGNVCELDIMFHLEKAHFMLEEMVMNGCI 124 Query: 121 IETNVRKIVSAVDELNNAN 139 +ET+ I+S + ++ A+ Sbjct: 125 VETSKANILSPIQLMDKAH 143 >7301077 [U] KOG0934 Clathrin adaptor complex small subunit Length = 153 Score = 77.4 bits (189), Expect = 9e-15 Identities = 37/98 (37%), Positives = 65/98 (65%), Gaps = 2/98 (2%) Query: 50 EDIQIIYKNYATLYFTFIVDEQESELAILDLIQTFVEALDKCFEEVNELDLIFNWQTLES 109 +D +I+YK YA+LYF +++ ++EL L++I +VE LDK F V ELD+IFN++ Sbjct: 49 KDCKIVYKRYASLYFCCAIEQNDNELLTLEIIHRYVELLDKYFGSVCELDIIFNFEKAYF 108 Query: 110 VLEEIIQGGLVIETNVRKIVSAV--DELNNANESENSF 145 +L+E++ GG + ET+ + ++ A+ +L +E+ SF Sbjct: 109 ILDELLIGGEIQETSKKNVLKAIASQDLLQEDETPQSF 146 >At4g35410 [U] KOG0934 Clathrin adaptor complex small subunit Length = 162 Score = 75.5 bits (184), Expect = 3e-14 Identities = 43/147 (29%), Positives = 85/147 (57%), Gaps = 15/147 (10%) Query: 1 MIKFYTPVEVEKQTLLLQQVYELISQRNSQVQSSFLVTPPSLLMDSGDNEDIQIIYKNYA 60 + K+Y+P ++++ +++++ +I R + L + + +++YK YA Sbjct: 16 LTKWYSPYAQKERSKVIRELSGVILNRGPK------------LCNFVEWRGYKVVYKRYA 63 Query: 61 TLYFTFIVDEQESELAILDLIQTFVEALDKCFEEVNELDLIFNWQTLESVLEEIIQGGLV 120 +LYF +D++++EL +L++I +VE LD+ F V ELDLIFN+ +L+E++ G + Sbjct: 64 SLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAGEL 123 Query: 121 IETN---VRKIVSAVDELNNANESENS 144 E++ V +I+SA D+L + E S Sbjct: 124 QESSKKTVARIISAQDQLVEVAKEEAS 150 >At2g17380 [U] KOG0934 Clathrin adaptor complex small subunit Length = 161 Score = 75.1 bits (183), Expect = 4e-14 Identities = 44/147 (29%), Positives = 86/147 (57%), Gaps = 15/147 (10%) Query: 1 MIKFYTPVEVEKQTLLLQQVYELISQRNSQVQSSFLVTPPSLLMDSGDNEDIQIIYKNYA 60 + K+Y+P ++++ +++++ +I R ++ +F+ + +++YK YA Sbjct: 16 LTKWYSPYTQKERSKVIRELSGVILNRGPKL-CNFI-----------EWRGYKVVYKRYA 63 Query: 61 TLYFTFIVDEQESELAILDLIQTFVEALDKCFEEVNELDLIFNWQTLESVLEEIIQGGLV 120 +LYF +DE ++EL +L++I +VE LD+ F V ELDLIFN+ +L+E++ G + Sbjct: 64 SLYFCMCIDEADNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAGEL 123 Query: 121 IETN---VRKIVSAVDELNNANESENS 144 E++ V +I+SA D+L + E S Sbjct: 124 QESSKKTVARIISAQDQLVEVAKEEAS 150 >At1g47830 [U] KOG0935 Clathrin adaptor complex small subunit Length = 142 Score = 75.1 bits (183), Expect = 4e-14 Identities = 44/135 (32%), Positives = 77/135 (56%), Gaps = 12/135 (8%) Query: 1 MIKFYTPVEVEKQTLLLQQVYELISQRNSQVQSSFLVTPPSLLMDSGDNEDIQIIYKNYA 60 + K+Y P+E ++ + +V+ L+ R+++ ++F+ + ++IY+ YA Sbjct: 16 LAKYYVPLEESEKHKVEYEVHRLVVNRDAKF-TNFV-----------EFRTHKVIYRRYA 63 Query: 61 TLYFTFIVDEQESELAILDLIQTFVEALDKCFEEVNELDLIFNWQTLESVLEEIIQGGLV 120 L+F+ VD ++ELA L+ I FVE LD F V ELDL+FN+ + +L+E I G + Sbjct: 64 GLFFSVCVDITDNELAYLESIHLFVEILDHFFSNVCELDLVFNFHKVYLILDEFILAGEL 123 Query: 121 IETNVRKIVSAVDEL 135 ET+ R I+ + EL Sbjct: 124 QETSKRAIIERMSEL 138 >CE09797 [U] KOG0934 Clathrin adaptor complex small subunit Length = 157 Score = 74.3 bits (181), Expect = 7e-14 Identities = 33/93 (35%), Positives = 61/93 (65%) Query: 50 EDIQIIYKNYATLYFTFIVDEQESELAILDLIQTFVEALDKCFEEVNELDLIFNWQTLES 109 +D++++YK YA+LYF +++ ++EL L++I +VE LDK F V ELD+IFN++ Sbjct: 53 KDLKVVYKRYASLYFCCAIEQNDNELITLEVIHRYVELLDKYFGSVCELDIIFNFEKAYF 112 Query: 110 VLEEIIQGGLVIETNVRKIVSAVDELNNANESE 142 +L+E + G + ET+ ++++ A+ + E E Sbjct: 113 ILDEFLLAGEIQETSKKQVLKAIAAQDLIQEEE 145 >Hs16950628 [U] KOG0934 Clathrin adaptor complex small subunit Length = 133 Score = 72.0 bits (175), Expect = 4e-13 Identities = 33/74 (44%), Positives = 52/74 (69%) Query: 51 DIQIIYKNYATLYFTFIVDEQESELAILDLIQTFVEALDKCFEEVNELDLIFNWQTLESV 110 D++++YK YA+LYF ++ Q++EL L+LI +VE LDK F V ELD+IFN++ + Sbjct: 54 DLKVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFI 113 Query: 111 LEEIIQGGLVIETN 124 L+E + GG V +T+ Sbjct: 114 LDEFLMGGDVQDTS 127 >7300728 [U] KOG0935 Clathrin adaptor complex small subunit Length = 142 Score = 71.6 bits (174), Expect = 5e-13 Identities = 39/137 (28%), Positives = 80/137 (57%), Gaps = 12/137 (8%) Query: 1 MIKFYTPVEVEKQTLLLQQVYELISQRNSQVQSSFLVTPPSLLMDSGDNEDIQIIYKNYA 60 + K+Y + +++ L+++V+ +++ R+++ ++F+ + + +I+Y+ YA Sbjct: 16 LAKWYMNFDDDEKQKLIEEVHAVVTVRDAK-HTNFV-----------EFRNFKIVYRRYA 63 Query: 61 TLYFTFIVDEQESELAILDLIQTFVEALDKCFEEVNELDLIFNWQTLESVLEEIIQGGLV 120 LYF VD ++ L L+ I FVE L++ F V ELDL+FN+ + SV++E+ G + Sbjct: 64 GLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYSVVDEMFLAGEI 123 Query: 121 IETNVRKIVSAVDELNN 137 ET+ K++ + LN+ Sbjct: 124 RETSQTKVLKQLLTLNS 140 >Hs4757996 [U] KOG0935 Clathrin adaptor complex small subunit Length = 142 Score = 69.7 bits (169), Expect = 2e-12 Identities = 38/129 (29%), Positives = 78/129 (60%), Gaps = 12/129 (9%) Query: 1 MIKFYTPVEVEKQTLLLQQVYELISQRNSQVQSSFLVTPPSLLMDSGDNEDIQIIYKNYA 60 + K+Y + +++ L+++V+ +++ R+++ ++F+ + + +IIY+ YA Sbjct: 16 LAKWYMQFDDDEKQKLIEEVHAVVTVRDAK-HTNFV-----------EFRNFKIIYRRYA 63 Query: 61 TLYFTFIVDEQESELAILDLIQTFVEALDKCFEEVNELDLIFNWQTLESVLEEIIQGGLV 120 LYF VD +++LA L+ I FVE L++ F V ELDL+FN+ + +V++E+ G + Sbjct: 64 GLYFCICVDVNDNKLAYLEGIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEI 123 Query: 121 IETNVRKIV 129 ET+ K++ Sbjct: 124 RETSQTKVL 132 >CE07018 [U] KOG0935 Clathrin adaptor complex small subunit Length = 142 Score = 65.9 bits (159), Expect = 3e-11 Identities = 36/129 (27%), Positives = 75/129 (57%), Gaps = 12/129 (9%) Query: 1 MIKFYTPVEVEKQTLLLQQVYELISQRNSQVQSSFLVTPPSLLMDSGDNEDIQIIYKNYA 60 + K+Y + +++ L+++V+ ++ R+++ ++F+ + + +I+Y+ YA Sbjct: 16 LAKWYMHFDDDEKQKLIEEVHACVTVRDAK-HTNFV-----------EFRNFKIVYRRYA 63 Query: 61 TLYFTFIVDEQESELAILDLIQTFVEALDKCFEEVNELDLIFNWQTLESVLEEIIQGGLV 120 LYF VD ++ L L+ I FVE L++ F V ELDL+FN+ + +V++E+ G + Sbjct: 64 GLYFCICVDITDNNLYYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEI 123 Query: 121 IETNVRKIV 129 ET+ K++ Sbjct: 124 RETSQTKVL 132 >Hs21361394 [U] KOG0934 Clathrin adaptor complex small subunit Length = 159 Score = 63.2 bits (152), Expect = 2e-10 Identities = 46/156 (29%), Positives = 77/156 (48%), Gaps = 26/156 (16%) Query: 3 KFYTPVEVEKQTLLLQQVYELISQRNSQVQSSFLVTPPSLLMDSGDNEDIQIIYKNYATL 62 K+Y V++ K+TLL +V + R+++ Q SF+ + +D ++IY+ YA L Sbjct: 18 KYYEHVDINKRTLLETEVIKSCLSRSNE-QCSFI-----------EYKDFKLIYRQYAAL 65 Query: 63 YFTFIVDEQESELAILDLIQTFVEALDKCFEEVNELDLIF-------NWQTLESVLEEII 115 + V++ E+E+AI + I FVE LD+ F V+ELD+ F WQ +E I Sbjct: 66 FIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDVSFFNTVFHSTWQMHSGPYQEPI 125 Query: 116 QGGLVIETNVRKIVSAVDELNNANESENSFTKLAGN 151 + KI SA++ ++S K A + Sbjct: 126 D-------ELPKICSALEPQQTCFSPDSSSFKGAAS 154 >YJR058c [U] KOG0935 Clathrin adaptor complex small subunit Length = 147 Score = 62.8 bits (151), Expect = 2e-10 Identities = 37/106 (34%), Positives = 58/106 (53%), Gaps = 10/106 (9%) Query: 17 LQQVYELISQRNSQVQSSFLVTPPSLLMDSGDNEDIQIIYKNYATLYFTFIVDEQESELA 76 + Q+Y LIS R+ + QS+F+ ++ ++IY+ YA LYF VD + E Sbjct: 35 IAQIYRLISSRDHKHQSNFVEF----------SDSTKLIYRRYAGLYFVMGVDLLDDEPI 84 Query: 77 ILDLIQTFVEALDKCFEEVNELDLIFNWQTLESVLEEIIQGGLVIE 122 L I FVE LD F V ELD++FN+ + +++E+ GG + E Sbjct: 85 YLCHIHLFVEVLDAFFGNVCELDIVFNFYKVYMIMDEMFIGGEIQE 130 >YLR170c [U] KOG0934 Clathrin adaptor complex small subunit Length = 156 Score = 60.5 bits (145), Expect = 1e-09 Identities = 31/95 (32%), Positives = 58/95 (60%), Gaps = 2/95 (2%) Query: 51 DIQIIYKNYATLYFTF-IVDEQESELAILDLIQTFVEALDKCFEEVNELDLIFNWQTLES 109 D +++YK YA+LYF + + ++EL L++I FVE +D F V ELD+IFN+ + Sbjct: 56 DHKVVYKRYASLYFIVGMTPDVDNELLTLEIIHRFVETMDTYFGNVCELDIIFNFSKVYD 115 Query: 110 VLEEIIQ-GGLVIETNVRKIVSAVDELNNANESEN 143 +L E+I G + E++ ++++ V ++ ++N Sbjct: 116 ILNEMIMCDGSIAESSRKEVLHHVTVMDTMESNDN 150 >ECU08g0150 [U] KOG0934 Clathrin adaptor complex small subunit Length = 98 Score = 45.1 bits (105), Expect = 5e-05 Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 1/71 (1%) Query: 54 IIYKNYATLYFTFIVDEQESELAILDLIQTFVEALDKCFEEVNELDLIFNWQTLESVLEE 113 +++ + ++ F+V E E+E+ IL LI + D+ F +V EL I+N++ +L+ Sbjct: 17 VVFNRFGNIFMAFVV-ENENEMYILSLINNLMSIYDRFFTKVCELHFIYNFKETHIILDN 75 Query: 114 IIQGGLVIETN 124 I G IE + Sbjct: 76 YIANGKCIEND 86 >Hs7706337 [U] KOG3343 Vesicle coat complex COPI zeta subunit Length = 177 Score = 44.7 bits (104), Expect = 6e-05 Identities = 22/84 (26%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Query: 50 EDIQIIYKNYATLYFTFIVDEQESELAILDLIQTFVEALDKCF-EEVNELDLIFNWQTLE 108 E + ++YK+ LYF I E+EL ++ ++ ++L + + V + L+ N + L Sbjct: 63 EGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENMEGLF 122 Query: 109 SVLEEIIQGGLVIETNVRKIVSAV 132 ++EI+ GG+++E++ +++V V Sbjct: 123 LAVDEIVDGGVILESDPQQVVHRV 146 >Hs7705983 [U] KOG3343 Vesicle coat complex COPI zeta subunit Length = 210 Score = 41.6 bits (96), Expect = 5e-04 Identities = 21/81 (25%), Positives = 46/81 (55%), Gaps = 1/81 (1%) Query: 54 IIYKNYATLYFTFIVDEQESELAILDLIQTFVEALDKCFEE-VNELDLIFNWQTLESVLE 112 I+YKN L+ + E+EL ++ ++ E+L+ + V + L+ N VL+ Sbjct: 100 IVYKNSIDLFLYVVGSSYENELMLMSVLTCLFESLNHMLRKNVEKRWLLENMDGAFLVLD 159 Query: 113 EIIQGGLVIETNVRKIVSAVD 133 EI+ GG+++E++ ++++ V+ Sbjct: 160 EIVDGGVILESDPQQVIQKVN 180 >Hs11038643 [U] KOG0935 Clathrin adaptor complex small subunit Length = 104 Score = 41.6 bits (96), Expect = 5e-04 Identities = 21/64 (32%), Positives = 40/64 (61%), Gaps = 1/64 (1%) Query: 67 IVDEQESELAILDLIQT-FVEALDKCFEEVNELDLIFNWQTLESVLEEIIQGGLVIETNV 125 +++E + + + D T FVE L++ F V ELDL+FN+ + +V++E+ G + ET+ Sbjct: 31 LIEEVHAVVTVRDAKHTNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQ 90 Query: 126 RKIV 129 K++ Sbjct: 91 TKVL 94 >7294073 [U] KOG3343 Vesicle coat complex COPI zeta subunit Length = 160 Score = 37.7 bits (86), Expect = 0.008 Identities = 19/89 (21%), Positives = 46/89 (51%), Gaps = 1/89 (1%) Query: 50 EDIQIIYKNYATLYFTFIVDEQESELAILDLIQTFVEALDKCFEEVNELDLIF-NWQTLE 108 + + +YK+ L+F + + E+EL +L ++ +++ ++ E L+ N + + Sbjct: 46 DGLTCVYKSNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLVLENLEIIM 105 Query: 109 SVLEEIIQGGLVIETNVRKIVSAVDELNN 137 +EI GG++++ + +V VD N+ Sbjct: 106 LAFDEICDGGIILDADPSSVVKRVDLRND 134 >Hs20539280 [U] KOG0934 Clathrin adaptor complex small subunit Length = 185 Score = 37.0 bits (84), Expect = 0.013 Identities = 19/59 (32%), Positives = 33/59 (55%) Query: 73 SELAILDLIQTFVEALDKCFEEVNELDLIFNWQTLESVLEEIIQGGLVIETNVRKIVSA 131 +EL L+ I ++E L+K F V ELD++FN++ + +L+E G + + I A Sbjct: 120 NELTALETIHHYMELLNKYFGSVCELDVVFNFEEVYFILDEFFLEGKLGNLQEKAIAQA 178 >At3g09800 [U] KOG3343 Vesicle coat complex COPI zeta subunit Length = 180 Score = 36.6 bits (83), Expect = 0.017 Identities = 22/80 (27%), Positives = 41/80 (50%), Gaps = 1/80 (1%) Query: 54 IIYKNYATLYFTFIVDEQESELAILDLIQTFVEALDKCF-EEVNELDLIFNWQTLESVLE 112 I+YK L+F E E+EL + ++Q F +A+ V +++ + N + L+ Sbjct: 67 IVYKFAQDLHFFVTGGENENELILASVLQGFFDAVALLLRSNVEKMEALENLDLIFLCLD 126 Query: 113 EIIQGGLVIETNVRKIVSAV 132 E++ G+V+ET+ I V Sbjct: 127 EMVDQGVVLETDPNVIAGKV 146 >CE11494 [U] KOG3343 Vesicle coat complex COPI zeta subunit Length = 184 Score = 36.2 bits (82), Expect = 0.023 Identities = 23/116 (19%), Positives = 59/116 (50%), Gaps = 2/116 (1%) Query: 50 EDIQIIYKNYATLYFTFIVDEQESELAILDLIQTFVEALDKCFEE-VNELDLIFNWQTLE 108 + + +Y++ LYF + +E+EL + + +A+ + V + LI + T+ Sbjct: 66 DGVTCLYRSNVDLYFYVLGSTRENELFLDATLTCLYDAVSVVLRKNVEKKALIDSMDTIM 125 Query: 109 SVLEEIIQGGLVIETNVRKIVSAVD-ELNNANESENSFTKLAGNRISEAFQAFSYS 163 +++EI G+++ET+ + +V + + + S+ S +++ + + A + F +S Sbjct: 126 LIIDEICDEGIIMETDAQAVVQRTALKSDEVSFSDQSVSQIGFSFMKSANEQFKWS 181 >At1g60970 [U] KOG3343 Vesicle coat complex COPI zeta subunit Length = 162 Score = 36.2 bits (82), Expect = 0.023 Identities = 24/82 (29%), Positives = 41/82 (49%), Gaps = 13/82 (15%) Query: 54 IIYKNYATLYFTFIVDEQESELAILDLIQTFVEALDKCF-------EEVNELDLIFNWQT 106 ++YK L+F E+E+EL + +++ +A+ E ++ LDLIF Sbjct: 65 VVYKFVQDLHFFVTGGEEENELILASVLEGLFDAVTLLLRSNVDKREALDNLDLIF---- 120 Query: 107 LESVLEEIIQGGLVIETNVRKI 128 +EII GG+V+ET+ I Sbjct: 121 --LSFDEIIDGGIVLETDANVI 140 >YPL010w [U] KOG3343 Vesicle coat complex COPI zeta subunit Length = 189 Score = 33.9 bits (76), Expect = 0.11 Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 1/86 (1%) Query: 50 EDIQIIYKNYATLYFTFIVDEQESELAILDLIQTFVEALDKCFEE-VNELDLIFNWQTLE 108 ED ++YK Y + + +E+E+ + ALD +++ ++ N+ + Sbjct: 69 EDHLVLYKEYIDITIYLVASLEENEIVLQQGFSAIRGALDLILNSGMDKKNIQENYDMVL 128 Query: 109 SVLEEIIQGGLVIETNVRKIVSAVDE 134 ++E I G+++ET+ I S V + Sbjct: 129 LAIDETIDNGVILETDSNTIASRVSK 154 >SPAC31A2.09c [U] KOG0938 Adaptor complexes medium subunit family Length = 446 Score = 32.0 bits (71), Expect = 0.43 Identities = 25/107 (23%), Positives = 51/107 (47%), Gaps = 6/107 (5%) Query: 55 IYKNYATLYFTFIVDEQESELAILDLIQTFVEALDKCFEEVNELDLIFNWQTLESVLEEI 114 IY + LY I + + +L+ +++ ++ L F ++NE + N + +L+E+ Sbjct: 55 IYTKHEDLYVVAITKGNPNVMIVLEFLESLIQDLTHYFGKLNENTVKDNVSFIFELLDEM 114 Query: 115 IQGGLVIETNVRKI-----VSAVDELNNANESENSF-TKLAGNRISE 155 I G++ T + ++AV + NA + S ++LA SE Sbjct: 115 IDYGIIQTTEPDALARSVSITAVKKKGNALSLKRSHSSQLAHTTSSE 161 >YOL034w [BDL] KOG0979 Structural maintenance of chromosome protein SMC5/Spr18 SMC superfamily Length = 1093 Score = 31.2 bits (69), Expect = 0.73 Identities = 20/77 (25%), Positives = 43/77 (54%), Gaps = 2/77 (2%) Query: 58 NYATLYFTFIVDEQESELAILDLIQTFVEALDKCFEEVNELDLIFNWQT--LESVLEEII 115 N+ + ++D+ ESE+A+++ ++ V LD+ E+ EL+ Q+ LE++ ++ Sbjct: 860 NFNLSFVQDVLDKLESEIAMVNHDESAVTILDQVTAELRELEHTVPQQSKDLETIKAKLK 919 Query: 116 QGGLVIETNVRKIVSAV 132 + V+E + IVS + Sbjct: 920 EDHAVLEPKLDDIVSKI 936 >SPAC18G6.11c [K] KOG2434 RNA polymerase I transcription factor Length = 599 Score = 31.2 bits (69), Expect = 0.73 Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 9/114 (7%) Query: 11 EKQTLLLQQVYELISQRNSQVQSSFLVTPPSL-----LMDSGDNEDIQIIYKNYATLYFT 65 + + + +YE + +S++ SS ++TPPSL LM D Q++Y ++ L Sbjct: 273 DSEVITASTLYERHTAISSEMTSSTILTPPSLTDTRQLMQQLD----QLLYTLFSYLDSN 328 Query: 66 FIVDEQESELAILDLIQTFVEALDKCFEEVNELDLIFNWQTLESVLEEIIQGGL 119 ++ L LI++FV + K F LIF L+ +I G L Sbjct: 329 LKSTSRDRYLVYNSLIKSFVNTVLKTFRCRYTQFLIFWASQLDPEFTDIFLGVL 382 >YOL018c [U] KOG0809 SNARE protein TLG2/Syntaxin 16 Length = 397 Score = 30.8 bits (68), Expect = 0.95 Identities = 21/81 (25%), Positives = 40/81 (48%), Gaps = 4/81 (4%) Query: 69 DEQESELAILDLIQTFVEALDKCFEEVNELDLIFNWQTLESVLEEIIQGGLVIETNVRKI 128 D+ E I DL ++ L KC+ + L I+N Q ++ +++ + L+I N++KI Sbjct: 107 DKSHDEALIEDLSFKVIQMLQKCYAVMKRLKTIYNSQFVDG--KQLSREELIILDNLQKI 164 Query: 129 VS--AVDELNNANESENSFTK 147 + E N +N++ K Sbjct: 165 YAEKIQTESNKFRVLQNNYLK 185 >Hs4557659 [R] KOG3867 Sulfatase Length = 550 Score = 30.8 bits (68), Expect = 0.95 Identities = 16/45 (35%), Positives = 27/45 (59%) Query: 121 IETNVRKIVSAVDELNNANESENSFTKLAGNRISEAFQAFSYSNF 165 ++T V +++SA+D+L AN + +FT G + E + YSNF Sbjct: 307 LDTQVGRLLSALDDLQLANSTIIAFTSDHGWALGEHGEWAKYSNF 351 >CE17473 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5 DEAD-box superfamily Length = 160 Score = 30.4 bits (67), Expect = 1.2 Identities = 37/143 (25%), Positives = 62/143 (42%), Gaps = 16/143 (11%) Query: 28 NSQVQSSFLVTPPSLLMDSGDNEDIQIIYKNYATLYFTFIVDEQESE-LAILDLIQTFVE 86 N +++ FLV +LLM+ GD + + ++DE S+ L L L F + Sbjct: 21 NVCIKTFFLVNFKTLLMNHGDISN-----------FMDVVIDESYSDGLGRLKLSMAFKK 69 Query: 87 ALDKC---FEEVNELDLIFNWQTLESVLEEIIQGGLVIETNVRKIVSAVDELNNANESEN 143 A +KC F E+N +D + +ESV + I V E ++KI + + + Sbjct: 70 A-EKCHKNFYELNFIDKDERNKYIESVKDMKICFSEVNEDTMKKIREILWPIGQFYSNGK 128 Query: 144 SFTKLAGNRISEAFQAFSYSNFS 166 F+ L E+ AF N + Sbjct: 129 QFSDLTRELPKESTVAFGKVNIT 151 >At4g08520 [U] KOG3343 Vesicle coat complex COPI zeta subunit Length = 153 Score = 30.4 bits (67), Expect = 1.2 Identities = 18/70 (25%), Positives = 35/70 (49%), Gaps = 1/70 (1%) Query: 54 IIYKNYATLYFTFIVDEQESELAILDLIQTFVEALDKCF-EEVNELDLIFNWQTLESVLE 112 ++YK L+F E E+EL + ++Q F +A+ V +++ + N + L+ Sbjct: 80 VVYKFAQDLHFFVTGGENENELVLSSVLQGFFDAVALLLRNNVEKMEALENLDLIFLCLD 139 Query: 113 EIIQGGLVIE 122 E++ GL E Sbjct: 140 EMVDQGLAQE 149 >At1g46408 [K] KOG0014 MADS box transcription factor Length = 266 Score = 30.0 bits (66), Expect = 1.6 Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 17/135 (12%) Query: 10 VEKQTLLLQQVYELISQRNSQVQSSFLVTPPSLLMDSGDNEDIQIIYKNYATLYFTFIVD 69 ++ + +L+ + EL QR+ Q Q+ L+ P ++ ++Y T+ F Sbjct: 106 MDSMSTMLRDLKELEKQRDHQTQT--LIHQPC---------SARVCIQDYVTVNFDGFNT 154 Query: 70 EQESELAILDLIQT--FVEALDKCFEEVNELDLIFNWQTLESVLE---EIIQGGLVIETN 124 E+++ LA+ D + LD+C E+ ++LD IF+ T L E+ + E N Sbjct: 155 EEQT-LAVSDNSNNNGLLGNLDECNEDFDDLDQIFDTVTNSEFLSVNLEMDDVTVNSEGN 213 Query: 125 VRKIVSAVDELNNAN 139 + AV + +N N Sbjct: 214 TEEQTLAVSDNSNNN 228 >Hs7305303 [R] KOG1917 Membrane-associated hematopoietic protein Length = 1128 Score = 29.6 bits (65), Expect = 2.1 Identities = 25/73 (34%), Positives = 33/73 (44%), Gaps = 7/73 (9%) Query: 55 IYKNYATLYFTFIVDEQESE------LAILDLIQTFVEALDKCFEEVNELDLIFNWQTLE 108 I KN A YFTF VD E + L +D+ Q F + N LDLI + TL Sbjct: 86 ILKNLALYYFTF-VDVMEFKDHVCELLNTIDVCQVFFDITVNFDLTKNYLDLIITYTTLM 144 Query: 109 SVLEEIIQGGLVI 121 +L I + +I Sbjct: 145 ILLSRIEERKAII 157 >7302648 [T] KOG1023 Natriuretic peptide receptor guanylate cyclase Length = 566 Score = 29.6 bits (65), Expect = 2.1 Identities = 22/93 (23%), Positives = 41/93 (43%), Gaps = 1/93 (1%) Query: 16 LLQQVYELISQRNSQVQSSFLVTPPSLLMDSGDNEDIQIIYKNYATLYFTFIVDEQESEL 75 L Q+ EL ++ F + PPS+ M + + T+YF+ IV E Sbjct: 305 LSQKAKELKREKRKSDSLLFQMLPPSVAMQLKQTQQVPAELYEAVTIYFSDIVGFTEIAA 364 Query: 76 AILDL-IQTFVEALDKCFEEVNELDLIFNWQTL 107 L + TF+ ++ + F+E E ++ +T+ Sbjct: 365 DCTPLEVVTFLNSIYRVFDERIECYDVYKVETI 397 >Hs20357498 [Z] KOG0516 Dystonin GAS (Growth-arrest-specific protein) and related proteins Length = 5171 Score = 29.3 bits (64), Expect = 2.8 Identities = 30/122 (24%), Positives = 51/122 (41%), Gaps = 10/122 (8%) Query: 18 QQVYELISQRNSQVQSSFLVTPPSLLMDSGDNEDIQIIYKNYATLYFTFIVDEQESELAI 77 +Q+ ELI++ + P L + G+ IQ Y TLY D ++ +A+ Sbjct: 3569 RQLRELIAEHKPHIDKMNKTGPQLLELSPGEGFSIQEKYVAADTLYSQIKEDVKKRAVAL 3628 Query: 78 LDLIQTFVEALDKCFEEVNELDLIFNWQTLESVLEEIIQGGLVIETNVRKIVSAVDELNN 137 + I + DK +D I ++LE ++E + Q I V KI + E N Sbjct: 3629 DEAISQSTQFHDK-------IDQIL--ESLERIVERLRQPP-SISAEVEKIKEQISENKN 3678 Query: 138 AN 139 + Sbjct: 3679 VS 3680 >Hs10864047 [TU] KOG0998 Synaptic vesicle protein EHS-1 and related EH domain proteins Length = 864 Score = 29.3 bits (64), Expect = 2.8 Identities = 23/72 (31%), Positives = 37/72 (50%), Gaps = 13/72 (18%) Query: 68 VDEQESELAILDLIQTFVEALDKCFEEVNELDLIFNWQTLESVLEEIIQGGLV-IETNVR 126 + QES+L + + L++ E+N L Q E+ LE+ IQ G V +ET ++ Sbjct: 484 IQSQESDLKSQE------DDLNRAKSELNRL------QQEETQLEQSIQAGRVQLETIIK 531 Query: 127 KIVSAVDELNNA 138 + S DE+N A Sbjct: 532 SLKSTQDEINQA 543 >7290211 [U] KOG2635 Medium subunit of clathrin adaptor complex Length = 532 Score = 29.3 bits (64), Expect = 2.8 Identities = 16/86 (18%), Positives = 41/86 (47%) Query: 48 DNEDIQIIYKNYATLYFTFIVDEQESELAILDLIQTFVEALDKCFEEVNELDLIFNWQTL 107 + + ++ +Y+ LY I + + L L+ ++ F + + + ++E +++ N L Sbjct: 50 ETDSVRYVYQPMEKLYMLLITTKASNILEDLETLRLFSKVIPEYSHSLDEKEIVENAFNL 109 Query: 108 ESVLEEIIQGGLVIETNVRKIVSAVD 133 +EI+ G N+ +I + V+ Sbjct: 110 IFAFDEIVALGYRESVNLAQIKTFVE 135 >7291221_2 [T] KOG2607 CDK5 activator-binding protein Length = 495 Score = 29.3 bits (64), Expect = 2.8 Identities = 21/129 (16%), Positives = 57/129 (43%), Gaps = 5/129 (3%) Query: 2 IKFYTPVEVEKQTLLLQQVYELISQRNSQVQSSFLVTPPSLLMDSGDNEDIQIIYKNYAT 61 ++ Y ++E + ++ + + I+ + + LV+ ++ + D + + ++ Sbjct: 357 MRIYELKQLESSSDIMFSLMDNIATHDGESIWKILVSVEKIIQQTSDKQTQHLFQLKHSP 416 Query: 62 LYFTFIVDEQESELAILDLIQTFVEALDKCFEEVNELDLIFNWQTLESVLEEIIQGGLVI 121 Y + + + ++ ++ EAL + E+ E Q L VLEE+I + Sbjct: 417 KYANMLATKLQQMTKAVEKLRATREALKQLTIELRE-----QRQDLNPVLEELIAQTRTL 471 Query: 122 ETNVRKIVS 130 ++++ K +S Sbjct: 472 QSHIEKDIS 480 >SPAC26F1.09 [R] KOG1102 Rab6 GTPase activator GAPCenA and related TBC domain proteins Length = 1031 Score = 28.9 bits (63), Expect = 3.6 Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 8/88 (9%) Query: 28 NSQVQSSFLVTPPSLLMDSGDNEDIQIIYKNYATLYFTFIVDEQESELAILDLIQTFVEA 87 +S ++S F+ P S+ GD + ++I+ Y + + ++ + L+ + IQ + Sbjct: 544 SSYLESVFISKPRSI----GDAQKLEIL--EYLQSQSSTVSNQVFTLLS--NFIQNPLFV 595 Query: 88 LDKCFEEVNELDLIFNWQTLESVLEEII 115 LD+CF+E L L+ N T+ +V+ + I Sbjct: 596 LDECFDEFRNLILMHNSHTVHTVVWKTI 623 >Hs15011904 [Z] KOG0516 Dystonin GAS (Growth-arrest-specific protein) and related proteins Length = 5430 Score = 28.9 bits (63), Expect = 3.6 Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 10/96 (10%) Query: 67 IVDEQESELAILDLIQTFVEALDKCFEEVNELDLIFNWQTLESVLEEIIQGGLVI---ET 123 IV + ES +I+ VEA + EE + L + LE + I+ L+ ET Sbjct: 4068 IVHDLESPGIDPSIIKQQVEAAETIKEETDGLH-----EELEFI--RILGADLIFACGET 4120 Query: 124 NVRKIVSAVDELNNANESENSFTKLAGNRISEAFQA 159 ++ ++DE+NNA E+ N K ++ +A QA Sbjct: 4121 EKPEVRKSIDEMNNAWENLNKTWKERLEKLEDAMQA 4156 >CE16167 [S] KOG0915 Uncharacterized conserved protein Length = 409 Score = 28.9 bits (63), Expect = 3.6 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 10/87 (11%) Query: 86 EALDKCFEEVNELDLIFNWQTLESVLEEIIQGGLVIETNVRKIVSAVDELNNANESENSF 145 E + K N+ D N L + LE+ I+ ++ N+ + ++ NNA E+E++ Sbjct: 239 ENVTKLIGARNDADSDDNMDGLSN-LEKEIRASKLVTLNLTALAISLPAFNNAEEAESTL 297 Query: 146 TKLAGNRISEAFQAFSYSNFSAWGSHQ 172 +++AG + S AW S Q Sbjct: 298 SQIAG---------YVKSTVIAWKSKQ 315 >CE04499 [I] KOG1362 Choline transporter-like protein Length = 771 Score = 28.9 bits (63), Expect = 3.6 Identities = 25/113 (22%), Positives = 49/113 (43%), Gaps = 20/113 (17%) Query: 47 GDNEDIQIIYKNYATLYFTFIVDEQESELAILDLIQTFVEALDKCFEEVNELDLIFNWQT 106 G + Q+ K + YF+++ + A + IQ ++++ C ++V++ + T Sbjct: 164 GGCQTTQLCVKECPSTYFSYL----QLRTASVSEIQNKMKSVVYCTDDVDKTTV-----T 214 Query: 107 LESVLEEIIQGGLVIETNVRK-----------IVSAVDELNNANESENSFTKL 148 L+ ++Q G + V+ I +AVD +NN S NS L Sbjct: 215 TFQALQNLVQRGKCVSYTVKSVPVLQRCFPEAIFNAVDNVNNVLNSSNSLDYL 267 >CE00639 [S] KOG0915 Uncharacterized conserved protein Length = 1792 Score = 28.9 bits (63), Expect = 3.6 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 10/87 (11%) Query: 86 EALDKCFEEVNELDLIFNWQTLESVLEEIIQGGLVIETNVRKIVSAVDELNNANESENSF 145 E + K N+ D N L + LE+ I+ ++ N+ + ++ NNA E+E++ Sbjct: 1622 ENVTKLIGARNDADSDDNMDGLSN-LEKEIRASKLVTLNLTALAISLPAFNNAEEAESTL 1680 Query: 146 TKLAGNRISEAFQAFSYSNFSAWGSHQ 172 +++AG + S AW S Q Sbjct: 1681 SQIAG---------YVKSTVIAWKSKQ 1698 >7301133 [T] KOG4369 RTK signaling protein MASK/UNC-44 Length = 2441 Score = 28.9 bits (63), Expect = 3.6 Identities = 18/54 (33%), Positives = 26/54 (47%), Gaps = 3/54 (5%) Query: 116 QGGLVIETNVRKIVSAVDELNNANESENSFTKLAGNRISEAFQAFSYSNFSAWG 169 Q LVI TN+ + A AN + +SF+ ++S A+ FS S WG Sbjct: 1897 QQNLVINTNLLNDLMAASA---ANTTSDSFSAQLAAKLSSAYSLFSDYQQSQWG 1947 >At3g02650_2 [R] KOG4197 FOG: PPR repeat Length = 502 Score = 28.9 bits (63), Expect = 3.6 Identities = 26/94 (27%), Positives = 47/94 (49%), Gaps = 12/94 (12%) Query: 68 VDEQESELAILDLIQTFVEALDKCFEEVNELDLIF-----NWQTLESVLEEIIQGGLVIE 122 ++E + L +L+ + F + +E N+L F +W+ E + EE+ Q GL + Sbjct: 416 IEEYDEALKLLNEMDRF--GVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLN 473 Query: 123 TNVRKIVSAVDELNNANESENSFTKLAGNRISEA 156 + ++ AV E+ ESE T+ GN ++EA Sbjct: 474 AISQGLIRAVKEM----ESEAKVTE-DGNLLAEA 502 >Hs7705348 [Z] KOG0247 Kinesin-like protein Length = 1780 Score = 28.5 bits (62), Expect = 4.7 Identities = 21/107 (19%), Positives = 45/107 (41%), Gaps = 9/107 (8%) Query: 6 TPVEVEKQTLLLQQVYELISQRNSQVQSSFLVTPPSLLMDSGDNEDI---------QIIY 56 T VE E+ T L+ + I ++ + + T L +++ + +II Sbjct: 662 TKVETEEATACLELKFNQIKAELAKTKGELIKTKEELKKRENESDSLIQELETSNKKIIT 721 Query: 57 KNYATLYFTFIVDEQESELAILDLIQTFVEALDKCFEEVNELDLIFN 103 +N I+D++E + +++ +E KC ++ + LI N Sbjct: 722 QNQRIKELINIIDQKEDTINEFQNLKSHMENTFKCNDKADTSSLIIN 768 >Hs4557625 [H] KOG3754 Gamma-glutamylcysteine synthetase Length = 637 Score = 28.5 bits (62), Expect = 4.7 Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 6/62 (9%) Query: 88 LDKCFEEVNELDLIFNWQTLESVLEEIIQGGL---VIETNVRKIVSAVDE---LNNANES 141 L KC E+ N++DL + + E +L+E I L V +R ++ +E L++ANES Sbjct: 336 LSKCGEKYNDIDLTIDKEIYEQLLQEGIDHLLAQHVAHLFIRDPLTLFEEKIHLDDANES 395 Query: 142 EN 143 ++ Sbjct: 396 DH 397 >Hs4504949 [W] KOG1836 Extracellular matrix glycoprotein Laminin subunits alpha and gamma Length = 1816 Score = 28.5 bits (62), Expect = 4.7 Identities = 33/139 (23%), Positives = 59/139 (41%), Gaps = 22/139 (15%) Query: 11 EKQTLLLQQVYELISQRNSQVQSSFLVTPPSLLMDSGDNEDIQIIYKNYATLYFTFIVDE 70 EKQ +++ E+++ S S +T P L + D+ I KN + +Y +D Sbjct: 510 EKQQERVREQMEVVNMSLSTSADS--LTTPRLTLSELDD-----IIKNASGIYAE--IDG 560 Query: 71 QESELAIL---------DLIQTFVEALDKCFEEVNELDLIFNWQTLESVLEEIIQGGLVI 121 +SEL + DL+Q ++ +E NEL + + ++++ + V Sbjct: 561 AKSELQVKLSNLSNLSHDLVQEAIDHAQDLQQEANELSRKLHSSDMNGLVQKALDASNVY 620 Query: 122 ETNVRKIVSAVDELNNANE 140 E IV+ V E N E Sbjct: 621 E----NIVNYVSEANETAE 635 >Hs22059693 [R] KOG1721 FOG: Zn-finger Length = 151 Score = 28.5 bits (62), Expect = 4.7 Identities = 12/42 (28%), Positives = 25/42 (58%) Query: 123 TNVRKIVSAVDELNNANESENSFTKLAGNRISEAFQAFSYSN 164 TNV+ + AV++ +N + + +TK ++ E ++FS S+ Sbjct: 57 TNVKNVAKAVNQFSNLTKHKKIYTKEKTSKCEECGKSFSESS 98 >SPBC1703.07 [C] KOG1254 ATP-citrate lyase Length = 615 Score = 28.1 bits (61), Expect = 6.2 Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 9/90 (10%) Query: 5 YTPVEVEKQTLLLQQVYELISQRNSQVQSSFLVTPPSLLMDSGDNEDIQIIYKNYATLYF 64 Y P EK LLQ+VYE + ++ V V PP++ +D +++ ++ K + + Sbjct: 305 YVPETFEKLPALLQEVYEGLVKKGVIVPQP-EVAPPNIPLDYAWAKELGLVRK--PSSFI 361 Query: 65 TFIVDEQESELAILDLIQTFVEALDKCFEE 94 I +++ SEL ++ + K FEE Sbjct: 362 CTISNDRGSELTYNNV------PISKVFEE 385 >Hs20538447 [IR] KOG0059 Lipid exporter ABCA1 and related proteins ABC superfamily Length = 4273 Score = 28.1 bits (61), Expect = 6.2 Identities = 14/55 (25%), Positives = 29/55 (52%) Query: 96 NELDLIFNWQTLESVLEEIIQGGLVIETNVRKIVSAVDELNNANESENSFTKLAG 150 ++ DL ++V E I++ G + ++++ +D LN+ SEN+ + L G Sbjct: 1265 HDRDLFSCADIFQNVTECILEDGFLYVNTSQRMLRILDTLNSTFSSENTISSLKG 1319 >CE04654 [U] KOG2740 Clathrin-associated protein medium chain Length = 332 Score = 28.1 bits (61), Expect = 6.2 Identities = 18/110 (16%), Positives = 45/110 (40%), Gaps = 4/110 (3%) Query: 55 IYKNYATLYFTFIVDEQESELAILDLIQTFVEALDKCFEEVNELDLIFNWQTLESVLEEI 114 +Y+N L+ ++ + L +++ + ++ + F+E ++ + N + +L+E+ Sbjct: 59 VYQN--NLFLVAVITVETPPLMVIEFLHRVIQTFTQYFDEFSDSSMKENCVMVFELLDEM 116 Query: 115 IQGGLVIETNVRKIVSAVDELNNANESENSFTKLAGNRISEAFQAFSYSN 164 + G + T + + + N N T +SE SN Sbjct: 117 LDNGFPLVTEMNILQDLIKPPNFLRNIANQVT--GRTNLSETLPTGQLSN 164 >Hs22045273 [Z] KOG0035 Ca2+-binding actin-bundling protein (actinin) alpha chain (EF-Hand protein superfamily) Length = 535 Score = 27.7 bits (60), Expect = 8.0 Identities = 27/112 (24%), Positives = 54/112 (48%), Gaps = 16/112 (14%) Query: 53 QIIYKNYATLYFTF-----IVDEQESELAILDLI-----QTFVEALDKCFEEVNELDLIF 102 Q IYK + TLY +++ + +L D + + F ++ EE+ ++ LI+ Sbjct: 153 QKIYKQWETLYSLTHSHREALEKMKKQLEATDHLYLEYAKAFYNWMESAVEELQDMFLIY 212 Query: 103 NWQTLESVLEEIIQGGLVIETNVRK---IVSAVDELNNANESENSFTKLAGN 151 N + +E ++ Q L + N R+ I++ E +S++ TKL+G+ Sbjct: 213 NTEKIEGLISAHSQ-KLTLPDNDREKEAILATHKEAQRITDSKH--TKLSGS 261 >CE29072 [DR] KOG1987 Speckle-type POZ protein SPOP and related proteins with TRAF MATH and BTB/POZ domains Length = 397 Score = 27.7 bits (60), Expect = 8.0 Identities = 12/34 (35%), Positives = 21/34 (61%) Query: 39 PPSLLMDSGDNEDIQIIYKNYATLYFTFIVDEQE 72 PP L M S +D++ +Y++ FT +V+E+E Sbjct: 187 PPELPMPSDVTKDLENLYRSGKHADFTLVVEERE 220 >CE27057 [DR] KOG1987 Speckle-type POZ protein SPOP and related proteins with TRAF MATH and BTB/POZ domains Length = 390 Score = 27.7 bits (60), Expect = 8.0 Identities = 12/34 (35%), Positives = 21/34 (61%) Query: 39 PPSLLMDSGDNEDIQIIYKNYATLYFTFIVDEQE 72 PP L M S +D++ +Y++ FT +V+E+E Sbjct: 180 PPELPMPSDVTKDLENLYRSGKHADFTLVVEERE 213 >At1g03270 [S] KOG2118 Predicted membrane protein contains two CBS domains Length = 514 Score = 27.7 bits (60), Expect = 8.0 Identities = 15/35 (42%), Positives = 20/35 (56%) Query: 91 CFEEVNELDLIFNWQTLESVLEEIIQGGLVIETNV 125 C E NE + TLE V EE++Q +V ET+V Sbjct: 415 CLLEDNEDAEVIGIITLEDVFEELLQAEIVDETDV 449 >7304120 [OT] KOG1497 COP9 signalosome subunit CSN4 Length = 407 Score = 27.7 bits (60), Expect = 8.0 Identities = 11/39 (28%), Positives = 22/39 (56%) Query: 19 QVYELISQRNSQVQSSFLVTPPSLLMDSGDNEDIQIIYK 57 ++ L + N VQ+ + SLL ++E++Q++YK Sbjct: 157 KIARLYLEDNDSVQAELFINRASLLQAETNSEELQVLYK 195 Database: KOG eukaryal database 04/03 Posted date: Apr 14, 2003 1:07 PM Number of letters in database: 30,389,216 Number of sequences in database: 60,738 Lambda K H 0.316 0.133 0.361 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,323,832 Number of Sequences: 60738 Number of extensions: 351284 Number of successful extensions: 1265 Number of sequences better than 10.0: 69 Number of HSP's better than 10.0 without gapping: 40 Number of HSP's successfully gapped in prelim test: 29 Number of HSP's that attempted gapping in prelim test: 1204 Number of HSP's gapped (non-prelim): 73 length of query: 172 length of database: 30,389,216 effective HSP length: 99 effective length of query: 73 effective length of database: 24,376,154 effective search space: 1779459242 effective search space used: 1779459242 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)