ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI4030 good U KOG1733 Intracellular trafficking, secretion, and vesicular transport Mitochondrial import inner membrane translocase, subunit TIM13
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI4030 1408290 1408592 101
(101 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YGR181w [U] KOG1733 Mitochondrial import inner membrane transloc... 124 2e-29
SPAC17C9.09c [U] KOG1733 Mitochondrial import inner membrane tra... 77 4e-15
7294676 [U] KOG1733 Mitochondrial import inner membrane transloc... 73 8e-14
Hs11024700 [U] KOG1733 Mitochondrial import inner membrane trans... 67 4e-12
CE15745 [U] KOG1733 Mitochondrial import inner membrane transloc... 59 9e-10
>YGR181w [U] KOG1733 Mitochondrial import inner membrane translocase subunit
TIM13
Length = 105
Score = 124 bits (312), Expect = 2e-29
Identities = 56/77 (72%), Positives = 67/77 (86%)
Query: 25 VKTQLKSQISQELAIANATELVNKVTENCFEKCLNAPYAASQDNCVDQCLAKYMRSWNAI 84
+ +LK+QI+QELA+ANATELVNK++ENCFEKCL +PYA D C+DQCLAKYMRSWN I
Sbjct: 29 IAKELKNQIAQELAVANATELVNKISENCFEKCLTSPYATRNDACIDQCLAKYMRSWNVI 88
Query: 85 SKAYINRIQQASVNGEI 101
SKAYI+RIQ AS +GEI
Sbjct: 89 SKAYISRIQNASASGEI 105
>SPAC17C9.09c [U] KOG1733 Mitochondrial import inner membrane translocase
subunit TIM13
Length = 95
Score = 77.0 bits (188), Expect = 4e-15
Identities = 33/78 (42%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
Query: 24 DVKTQLKSQISQELAIANATELVNKVTENCFEKCLNAP---YAASQDNCVDQCLAKYMRS 80
D K+ QI QELA+A A EL++K+ ENCF+KC+ P + ++ +CV +C+ +YM +
Sbjct: 16 DKKSIFMKQIRQELAVAQAGELISKINENCFDKCIPEPGSTFDPNEKSCVSKCMERYMDA 75
Query: 81 WNAISKAYINRIQQASVN 98
WN +S+ YI+R+Q+ N
Sbjct: 76 WNIVSRTYISRMQREQKN 93
>7294676 [U] KOG1733 Mitochondrial import inner membrane translocase
subunit TIM13
Length = 92
Score = 72.8 bits (177), Expect = 8e-14
Identities = 28/72 (38%), Positives = 52/72 (71%), Gaps = 3/72 (4%)
Query: 26 KTQLKSQISQELAIANATELVNKVTENCFEKCLNAP---YAASQDNCVDQCLAKYMRSWN 82
K +L +Q+ Q++A+ANA E+++K+TE CF+KC+ P +++ C+ QC+ ++M +WN
Sbjct: 8 KGELMNQVKQQIALANAQEMLSKMTEKCFKKCIQKPGKSLDSTEQRCISQCMDRFMDAWN 67
Query: 83 AISKAYINRIQQ 94
+S+ Y NR+Q+
Sbjct: 68 LVSRTYGNRLQR 79
>Hs11024700 [U] KOG1733 Mitochondrial import inner membrane translocase
subunit TIM13
Length = 95
Score = 67.0 bits (162), Expect = 4e-12
Identities = 26/73 (35%), Positives = 47/73 (63%), Gaps = 3/73 (4%)
Query: 29 LKSQISQELAIANATELVNKVTENCFEKCLNAPYAA---SQDNCVDQCLAKYMRSWNAIS 85
+ Q+ ++A+ANA EL+ ++T+ CF KC+ P + S+ C+ C+ +YM +WN +S
Sbjct: 22 IMEQVKVQIAVANAQELLQRMTDKCFRKCIGKPGGSLDNSEQKCIAMCMDRYMDAWNTVS 81
Query: 86 KAYINRIQQASVN 98
+AY +R+Q+ N
Sbjct: 82 RAYNSRLQRERAN 94
>CE15745 [U] KOG1733 Mitochondrial import inner membrane translocase
subunit TIM13
Length = 108
Score = 59.3 bits (142), Expect = 9e-10
Identities = 25/70 (35%), Positives = 43/70 (60%), Gaps = 3/70 (4%)
Query: 28 QLKSQISQELAIANATELVNKVTENCFEKCLNAP---YAASQDNCVDQCLAKYMRSWNAI 84
Q+ S + Q+ A+ANA LV ++E C KC+ AP A+ + C+ +C+ ++M SWN +
Sbjct: 20 QVISGVKQQAALANAQNLVTDISEKCTNKCITAPGSSLASGEKQCLQRCMDRFMESWNLV 79
Query: 85 SKAYINRIQQ 94
S+ R+Q+
Sbjct: 80 SQTLQKRLQE 89
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.315 0.125 0.354
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,916,979
Number of Sequences: 60738
Number of extensions: 116397
Number of successful extensions: 380
Number of sequences better than 1.0e-05: 5
Number of HSP's better than 0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 373
Number of HSP's gapped (non-prelim): 5
length of query: 101
length of database: 30,389,216
effective HSP length: 77
effective length of query: 24
effective length of database: 25,712,390
effective search space: 617097360
effective search space used: 617097360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)