ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI4128 check: MH A KOG0268 RNA processing and modification Sof1-like rRNA processing protein (contains WD40 repeats)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI4128 1439610 1441043 478
(478 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YLL011w [A] KOG0268 Sof1-like rRNA processing protein (contains ... 758 0.0
SPBC1A4.07c [A] KOG0268 Sof1-like rRNA processing protein (conta... 457 e-128
Hs10092627 [A] KOG0268 Sof1-like rRNA processing protein (contai... 401 e-111
7294287 [A] KOG0268 Sof1-like rRNA processing protein (contains ... 379 e-105
CE05083 [A] KOG0268 Sof1-like rRNA processing protein (contains ... 303 5e-82
ECU02g0240 [A] KOG0268 Sof1-like rRNA processing protein (contai... 198 2e-50
At4g28450 [A] KOG0268 Sof1-like rRNA processing protein (contain... 159 7e-39
Hs20543075 [A] KOG0268 Sof1-like rRNA processing protein (contai... 114 4e-25
Hs7661768 [A] KOG0268 Sof1-like rRNA processing protein (contain... 92 2e-18
SPCC18.05c [S] KOG0271 Notchless-like WD40 repeat-containing pro... 74 4e-13
Hs7108333_2 [R] KOG4155 FOG: WD40 repeat 74 5e-13
Hs4502123_2 [R] KOG4155 FOG: WD40 repeat 73 1e-12
Hs4758560 [A] KOG0265 U5 snRNP-specific protein-like factor and ... 70 5e-12
CE07020 [R] KOG0288 WD40 repeat protein TipD 70 5e-12
At4g02730 [R] KOG0266 WD40 repeat-containing protein 70 5e-12
7302720 [R] KOG0266 WD40 repeat-containing protein 70 5e-12
Hs18544419 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp... 69 1e-11
Hs13629793 [A] KOG0265 U5 snRNP-specific protein-like factor and... 69 2e-11
SPBC713.05 [S] KOG0316 Conserved WD40 repeat-containing protein 68 3e-11
7296245 [A] KOG0265 U5 snRNP-specific protein-like factor and re... 68 3e-11
Hs16117781 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 67 4e-11
Hs16117779 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 67 4e-11
SPBC1711.16 [S] KOG0270 WD40 repeat-containing protein 67 6e-11
At3g15610 [I] KOG0278 Serine/threonine kinase receptor-associate... 67 6e-11
Hs5032159 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 66 1e-10
SPAC29E6.01 [S] KOG0281 Beta-TrCP (transducin repeats containing... 65 2e-10
Hs14150114 [S] KOG0316 Conserved WD40 repeat-containing protein 65 2e-10
7302603 [R] KOG0289 mRNA splicing factor 65 3e-10
7292465 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 65 3e-10
YNL317w [A] KOG0284 Polyadenylation factor I complex subunit PFS2 64 4e-10
At2g41500 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4... 64 4e-10
7293972 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (... 64 4e-10
SPAC57A10.05c [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 64 5e-10
Hs20149592 [I] KOG0278 Serine/threonine kinase receptor-associat... 64 5e-10
CE17294 [S] KOG0271 Notchless-like WD40 repeat-containing protein 64 5e-10
Hs16554627 [R] KOG0266 WD40 repeat-containing protein 63 8e-10
At3g49660 [R] KOG0266 WD40 repeat-containing protein 63 8e-10
7296187 [S] KOG0271 Notchless-like WD40 repeat-containing protein 63 8e-10
At2g43770 [A] KOG0265 U5 snRNP-specific protein-like factor and ... 63 1e-09
Hs9506645 [R] KOG0266 WD40 repeat-containing protein 62 1e-09
CE27713 [A] KOG0265 U5 snRNP-specific protein-like factor and re... 62 1e-09
CE11860 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NU... 62 2e-09
At1g10580 [S] KOG0282 mRNA splicing factor 62 2e-09
YCR072c [S] KOG0271 Notchless-like WD40 repeat-containing protein 62 2e-09
At5g50230 [R] KOG0288 WD40 repeat protein TipD 61 3e-09
At5g67320 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 61 4e-09
At5g64730 [S] KOG0316 Conserved WD40 repeat-containing protein 60 5e-09
Hs19913371 [B] KOG0273 Beta-transducin family (WD-40 repeat) pro... 60 7e-09
At5g23430 [D] KOG0267 Microtubule severing protein katanin p80 s... 60 7e-09
At4g35050 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 60 7e-09
At1g15470 [I] KOG0278 Serine/threonine kinase receptor-associate... 60 7e-09
Hs15150805 [B] KOG0273 Beta-transducin family (WD-40 repeat) pro... 60 9e-09
7296209 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 60 9e-09
7293188 [D] KOG0267 Microtubule severing protein katanin p80 sub... 60 9e-09
7290331 [R] KOG0266 WD40 repeat-containing protein 60 9e-09
At5g52820 [S] KOG0271 Notchless-like WD40 repeat-containing protein 59 1e-08
At3g18140 [R] KOG0315 G-protein beta subunit-like protein (conta... 59 1e-08
At2g22040 [R] KOG0315 G-protein beta subunit-like protein (conta... 58 3e-08
7303631 [S] KOG0308 Conserved WD40 repeat-containing protein 58 3e-08
7302979 [S] KOG0295 WD40 repeat-containing protein 58 3e-08
SPAC4D7.03 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 58 4e-08
Hs7019573 [D] KOG0642 Cell-cycle nuclear protein contains WD-40 ... 58 4e-08
CE16234 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NU... 58 4e-08
Hs5902034 [S] KOG0270 WD40 repeat-containing protein 57 5e-08
Hs4557741 [S] KOG0295 WD40 repeat-containing protein 57 5e-08
7303687 [K] KOG0263 Transcription initiation factor TFIID subuni... 57 5e-08
At3g16650 [A] KOG0285 Pleiotropic regulator 1 57 6e-08
At5g58230 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 57 8e-08
At5g08390 [D] KOG0267 Microtubule severing protein katanin p80 s... 57 8e-08
7301821 [S] KOG0269 WD40 repeat-containing protein 57 8e-08
YNL006w [R] KOG0315 G-protein beta subunit-like protein (contain... 56 1e-07
Hs11128017 [D] KOG0642 Cell-cycle nuclear protein contains WD-40... 56 1e-07
CE27149 [S] KOG0316 Conserved WD40 repeat-containing protein 56 1e-07
CE05372 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (... 56 1e-07
SPAC26H5.03 [BL] KOG1009 Chromatin assembly complex 1 subunit B/... 56 1e-07
CE29339 [S] KOG0295 WD40 repeat-containing protein 56 1e-07
7297332 [D] KOG0642 Cell-cycle nuclear protein contains WD-40 re... 56 1e-07
YJL112w [R] KOG4155 FOG: WD40 repeat 55 2e-07
SPAC227.12 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp... 55 2e-07
CE29560 [S] KOG0300 WD40 repeat-containing protein 55 2e-07
CE26861 [S] KOG0300 WD40 repeat-containing protein 55 2e-07
At2g16780 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 55 2e-07
7302600 [R] KOG4155 FOG: WD40 repeat 55 2e-07
SPCC1672.10 [B] KOG0264 Nucleosome remodeling factor subunit CAF... 55 2e-07
Hs13129110 [A] KOG0284 Polyadenylation factor I complex subunit ... 55 2e-07
At5g25150 [K] KOG0263 Transcription initiation factor TFIID subu... 55 2e-07
SPBC1289.11 [A] KOG0265 U5 snRNP-specific protein-like factor an... 55 3e-07
Hs5031817 [D] KOG0267 Microtubule severing protein katanin p80 s... 55 3e-07
ECU02g1400 [A] KOG0284 Polyadenylation factor I complex subunit ... 55 3e-07
CE27762 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 55 3e-07
CE25007 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 55 3e-07
At4g34460 [R] KOG0286 G-protein beta subunit 55 3e-07
YPL151c [A] KOG0285 Pleiotropic regulator 1 54 4e-07
Hs8922679 [R] KOG0275 Conserved WD40 repeat-containing protein 54 4e-07
7302082 [A] KOG0640 mRNA cleavage stimulating factor complex; su... 54 4e-07
Hs7657439 [K] KOG0263 Transcription initiation factor TFIID subu... 54 5e-07
At1g62020 [U] KOG0292 Vesicle coat complex COPI alpha subunit 54 5e-07
7291678 [R] KOG0641 WD40 repeat protein 54 5e-07
7290895 [R] KOG0286 G-protein beta subunit 54 5e-07
YEL056w [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NU... 54 7e-07
SPBP22H7.07 [A] KOG0285 Pleiotropic regulator 1 54 7e-07
SPAC29A4.18 [B] KOG0264 Nucleosome remodeling factor subunit CAF... 54 7e-07
Hs8923881 [R] KOG0266 WD40 repeat-containing protein 54 7e-07
Hs7705258 [U] KOG0307 Vesicle coat complex COPII subunit SEC31 54 7e-07
Hs7662370 [U] KOG0307 Vesicle coat complex COPII subunit SEC31 54 7e-07
Hs14784298 [R] KOG4227 WD40 repeat protein 54 7e-07
Hs4758558 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4... 53 9e-07
CE18578 [A] KOG0265 U5 snRNP-specific protein-like factor and re... 53 9e-07
At1g61210 [D] KOG0267 Microtubule severing protein katanin p80 s... 53 9e-07
7297759 [Z] KOG0313 Microtubule binding protein YTM1 (contains W... 53 9e-07
YBR198c [K] KOG0263 Transcription initiation factor TFIID subuni... 53 1e-06
SPCC5E4.03c [K] KOG0263 Transcription initiation factor TFIID su... 53 1e-06
SPAC630.14c [R] KOG0266 WD40 repeat-containing protein 53 1e-06
Hs5729852 [R] KOG0286 G-protein beta subunit 53 1e-06
Hs22048320 [B] KOG0264 Nucleosome remodeling factor subunit CAF1... 53 1e-06
Hs20336270 [R] KOG0286 G-protein beta subunit 53 1e-06
Hs14149696 [U] KOG0307 Vesicle coat complex COPII subunit SEC31 53 1e-06
At2g21390 [U] KOG0292 Vesicle coat complex COPI alpha subunit 53 1e-06
7298279 [S] KOG0316 Conserved WD40 repeat-containing protein 53 1e-06
7296910 [JT] KOG0643 Translation initiation factor 3 subunit i (... 53 1e-06
YCR084c [R] KOG0266 WD40 repeat-containing protein 52 1e-06
Hs4507283 [D] KOG0642 Cell-cycle nuclear protein contains WD-40 ... 52 1e-06
At4g15900 [A] KOG0285 Pleiotropic regulator 1 52 2e-06
7292151 [R] KOG1334 WD40 repeat protein 52 2e-06
YIL046w [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 52 3e-06
Hs4505895 [A] KOG0285 Pleiotropic regulator 1 52 3e-06
Hs21071067 [K] KOG0263 Transcription initiation factor TFIID sub... 52 3e-06
At3g27640 [S] KOG0321 WD40 repeat-containing protein L2DTL 52 3e-06
At1g52730 [I] KOG0278 Serine/threonine kinase receptor-associate... 52 3e-06
SPAC18B11.10 [R] KOG0266 WD40 repeat-containing protein 51 3e-06
ECU03g0430 [S] KOG0271 Notchless-like WD40 repeat-containing pro... 51 3e-06
CE06090 [T] KOG0279 G protein beta subunit-like protein 51 3e-06
SPAP17D4.01 [U] KOG0277 Peroxisomal targeting signal type 2 rece... 51 4e-06
Hs4885105 [BL] KOG1009 Chromatin assembly complex 1 subunit B/CA... 51 4e-06
CE06118 [D] KOG0642 Cell-cycle nuclear protein contains WD-40 re... 51 4e-06
At5g60940 [A] KOG0640 mRNA cleavage stimulating factor complex; ... 51 4e-06
7292737 [A] KOG0285 Pleiotropic regulator 1 51 4e-06
Hs7706657 [S] KOG0282 mRNA splicing factor 50 6e-06
At5g54520 [S] KOG0282 mRNA splicing factor 50 6e-06
7302218 [R] KOG0302 Ribosome Assembly protein 50 6e-06
7299974 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NU... 50 6e-06
SPBC1198.12 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 a... 50 7e-06
Hs22057346 [R] KOG1334 WD40 repeat protein 50 7e-06
ECU07g0750 [B] KOG0264 Nucleosome remodeling factor subunit CAF1... 50 7e-06
CE02043 [R] KOG0289 mRNA splicing factor 50 7e-06
CE00901 [R] KOG0266 WD40 repeat-containing protein 50 7e-06
At5g05970 [T] KOG4378 Nuclear protein COP1 50 7e-06
At3g63460 [U] KOG0307 Vesicle coat complex COPII subunit SEC31 50 7e-06
At1g11160 [D] KOG0267 Microtubule severing protein katanin p80 s... 50 7e-06
7299285 [R] KOG4155 FOG: WD40 repeat 50 7e-06
Hs21071065 [K] KOG0263 Transcription initiation factor TFIID sub... 50 1e-05
>YLL011w [A] KOG0268 Sof1-like rRNA processing protein (contains WD40
repeats)
Length = 489
Score = 758 bits (1958), Expect = 0.0
Identities = 362/468 (77%), Positives = 405/468 (86%), Gaps = 7/468 (1%)
Query: 1 MKIKTISRSADDYVPVKSTQESQMPRNLNPALHPFERAREYTKALNATKLERMFAKPFVG 60
MKIKTI RSADDYVPVKSTQESQMPRNLNP LHPFERAREYTKALNATKLERMFAKPFVG
Sbjct: 1 MKIKTIKRSADDYVPVKSTQESQMPRNLNPELHPFERAREYTKALNATKLERMFAKPFVG 60
Query: 61 QLGYGHRDGVYTIAKNYNVLNKLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTP 120
QLGYGHRDGVY IAKNY LNKLAT S DGVIKYWNMSTREE SFKAHYG+VTGLCVT
Sbjct: 61 QLGYGHRDGVYAIAKNYGSLNKLATGSADGVIKYWNMSTREEFVSFKAHYGLVTGLCVTQ 120
Query: 121 SYLSPQR-----ENFMLSCGDDKTVKLWSVNSDDFSNVK--DDTRLNTDEGIIKTFHGEH 173
++ +NFMLSC DDKTVKLWS+N DD+SN D+ + +EG+I+TF GE
Sbjct: 121 PRFHDKKPDLKSQNFMLSCSDDKTVKLWSINVDDYSNKNSSDNDSVTNEEGLIRTFDGES 180
Query: 174 AFQSLDHHRQKSNFVTGGAQIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGS 233
AFQ +D HR+ S F TGGA+I LWD NR KP+S+LSWGADNI ++FNQNE DILASTGS
Sbjct: 181 AFQGIDSHRENSTFATGGAKIHLWDVNRLKPVSDLSWGADNITSLKFNQNETDILASTGS 240
Query: 234 DNSVVLYDLRTNSPTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHV 293
DNS+VLYDLRTNSPTQKIVQTMRTN+ICWNP+EAFNFV ANEDHNAYYYDMRN+S++L+V
Sbjct: 241 DNSIVLYDLRTNSPTQKIVQTMRTNAICWNPMEAFNFVTANEDHNAYYYDMRNLSRSLNV 300
Query: 294 FKDHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDS 353
FKDHVSAVMDVDFSPTGDE+VTGSYDK+IRIY+ HGHSREIYHTKRMQH+FQVKY+MDS
Sbjct: 301 FKDHVSAVMDVDFSPTGDEIVTGSYDKSIRIYKTNHGHSREIYHTKRMQHVFQVKYSMDS 360
Query: 354 KYIVSGSDDGNVRLWRAKAWERSNAKSTREKNKLEYDEKLKERFKHMPEVRRISRHRHVP 413
KYI+SGSDDGNVRLWR+KAWERSN K+TREKNKLEYDEKLKERF+HMPE++RISRHRHVP
Sbjct: 361 KYIISGSDDGNVRLWRSKAWERSNVKTTREKNKLEYDEKLKERFRHMPEIKRISRHRHVP 420
Query: 414 KVVKKAQEIKKIEIDSLXXXXXXXXXXXXDMPFLPERKKQIVGTVFQY 461
+V+KKAQEIK IE+ S+ DMP++ ERKKQIVGTV +Y
Sbjct: 421 QVIKKAQEIKNIELSSIKRREANERRTRKDMPYISERKKQIVGTVHKY 468
>SPBC1A4.07c [A] KOG0268 Sof1-like rRNA processing protein (contains WD40
repeats)
Length = 436
Score = 457 bits (1176), Expect = e-128
Identities = 228/459 (49%), Positives = 311/459 (67%), Gaps = 29/459 (6%)
Query: 1 MKIKTISRSADDYVPVKSTQESQMPRNLNPALHPFERAREYTKALNATKLERMFAKPFVG 60
MK+KTI+R + + + RNL+P+LHPFERAREYT+ALNATK++RMFA PF+G
Sbjct: 1 MKVKTITRGTS---LTRLNDQDPVKRNLDPSLHPFERAREYTRALNATKMDRMFAAPFLG 57
Query: 61 QLGYGHRDGVYTIAKNYNVLNKLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTP 120
QLG GH+DGVY++A++ L A+ SGDG +K W+ S R E + KAH G+V GL +
Sbjct: 58 QLGRGHQDGVYSLARDTKTLIDCASGSGDGAVKLWDASERCERWTSKAHEGIVRGLVFS- 116
Query: 121 SYLSPQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIK-TFHGEHAFQSLD 179
+ +LSC D+ V + LN +G +K ++ G+ + +D
Sbjct: 117 ------NQGDVLSCASDRYVYM----------------LNKQDGKVKRSYLGDSSLLDID 154
Query: 180 HHRQKSNFVTGGAQIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVL 239
+ F T G + +WD +R P++ WGAD + V+FN E +LAS G D S+V+
Sbjct: 155 TSKGGDLFATSGENVSIWDYSRDTPVTKFEWGADTLPVVKFNYTETSVLASAGMDRSIVI 214
Query: 240 YDLRTNSPTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVS 299
YDLRT+SP K++ +RTNSI WNP+EAFNFV +EDHN Y YDMRN+ +ALHV+KDHVS
Sbjct: 215 YDLRTSSPLTKLITKLRTNSISWNPMEAFNFVAGSEDHNLYMYDMRNLKRALHVYKDHVS 274
Query: 300 AVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSKYIVSG 359
AVM VDFSPTG E V+GSYDKTIRIY V+ GHSR++YHTKRMQ + VK++MD++YI SG
Sbjct: 275 AVMSVDFSPTGQEFVSGSYDKTIRIYNVREGHSRDVYHTKRMQRVTAVKFSMDAQYIFSG 334
Query: 360 SDDGNVRLWRAKAWERSNAKSTREKNKLEYDEKLKERFKHMPEVRRISRHRHVPKVVKKA 419
SDD NVRLWRA+A R++ +STRE+N+L+Y + L+ER+KH+PE+RRI+RHRH+P VKKA
Sbjct: 335 SDDSNVRLWRARASSRASIRSTREENRLKYLDSLRERYKHIPEIRRIARHRHLPTNVKKA 394
Query: 420 QEIKKIEIDSLXXXXXXXXXXXXD--MPFLPERKKQIVG 456
EIK+ EI+SL +P+ ER++ +VG
Sbjct: 395 AEIKREEINSLKRREENIRRHSKKGAVPYEKERERHVVG 433
>Hs10092627 [A] KOG0268 Sof1-like rRNA processing protein (contains WD40
repeats)
Length = 445
Score = 401 bits (1031), Expect = e-111
Identities = 200/460 (43%), Positives = 293/460 (63%), Gaps = 18/460 (3%)
Query: 1 MKIKTISRSADDYVPVKSTQESQMPRNLNPALHPFERAREYTKALNATKLERMFAKPFVG 60
MK+K +SR+ D+YV ++PRN +PALHPFE REY +ALNATKLER+FAKPF+
Sbjct: 1 MKVKMLSRNPDNYVRETKLDLQRVPRNYDPALHPFEVPREYVRALNATKLERVFAKPFLA 60
Query: 61 QLGYGHRDGVYTIAKNYNVLNKLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTP 120
L GHRDGV +AK+ L + + + DG ++ WN++ R + + +AH G V G+C
Sbjct: 61 SLD-GHRDGVNCLAKHPEKLATVLSGACDGEVRIWNLTQRNCIRTIQAHEGFVRGICTRF 119
Query: 121 SYLSPQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDH 180
S + GDDKTVK W ++ + + +E + T G+ + +DH
Sbjct: 120 CGTS------FFTVGDDKTVKQWKMDGPGYGD---------EEEPLHTILGKTVYTGIDH 164
Query: 181 HRQKSNFVTGGAQIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLY 240
H +++ F T G Q+++WD R+ PI +++WG D+I+ V+FN E +L S SD ++VLY
Sbjct: 165 HWKEAVFATCGQQVDIWDEQRTNPICSMTWGFDSISSVKFNPIETFLLGSCASDRNIVLY 224
Query: 241 DLRTNSPTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSA 300
D+R +P +K++ MRTN+ICWNP+EAF F ANED+N Y +DMR + + V DHVSA
Sbjct: 225 DMRQATPLKKVILDMRTNTICWNPMEAFIFTAANEDYNLYTFDMRALDTPVMVHMDHVSA 284
Query: 301 VMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSKYIVSGS 360
V+DVD+SPTG E V+ S+DK+IRI+ V SRE+YHTKRMQH+ VK+T DSKYI+ GS
Sbjct: 285 VLDVDYSPTGKEFVSASFDKSIRIFPVDKSRSREVYHTKRMQHVICVKWTSDSKYIMCGS 344
Query: 361 DDGNVRLWRAKAWERSNAKSTREKNKLEYDEKLKERFKHMPEVRRISRHRHVPKVVKKAQ 420
D+ N+RLW+A A E+ ++REK +Y++KLKE+F+H P ++RI+RHRH+PK +
Sbjct: 345 DEMNIRLWKANASEKLGVLTSREKAAKDYNQKLKEKFQHYPHIKRIARHRHLPKSIYSQI 404
Query: 421 EIKKI--EIDSLXXXXXXXXXXXXDMPFLPERKKQIVGTV 458
+ ++I E +P + E+KK +V V
Sbjct: 405 QEQRIMKEARRRKEVNRIKHSKPGSVPLVSEKKKHVVAVV 444
>7294287 [A] KOG0268 Sof1-like rRNA processing protein (contains WD40
repeats)
Length = 446
Score = 379 bits (973), Expect = e-105
Identities = 191/459 (41%), Positives = 276/459 (59%), Gaps = 21/459 (4%)
Query: 1 MKIKTISRSADDYVPVKSTQESQMPRNLNPALHPFERAREYTKALNATKLERMFAKPFVG 60
MK+K ISR+ D+YV Q+ +MPRN +P+LHP E REY +ALNATKL+R+FAKPFV
Sbjct: 1 MKVKMISRNPDNYVRETKLQQHKMPRNYDPSLHPLEGPREYVRALNATKLDRVFAKPFVC 60
Query: 61 QLGYGHRDGVYTIAKNYNVLNKLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTP 120
L GHRDGV K+ L+ LAT + DG ++ W+++ R +F AH G V G+ T
Sbjct: 61 NLS-GHRDGVSCFGKHPKQLSTLATGAYDGEVRIWDLANRISSRNFVAHDGFVRGIAYT- 118
Query: 121 SYLSPQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDH 180
Q + + GDDKT+K+W + + + DE + T + + H
Sbjct: 119 -----QNGGRIFTVGDDKTIKVWKAEAPE---------VGEDEVPVNTILSKFGLHGISH 164
Query: 181 HRQKSNFVTGGAQIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLY 240
+R+ + F T G +WD + P+ L WG D ++ + +N E ILA SD S++LY
Sbjct: 165 NRRDNKFATCGEVCAIWDERHNDPLKTLKWGVDTLHTISYNPVETSILACCASDRSIILY 224
Query: 241 DLRTNSPTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSA 300
D R P +K+V TM++N + WNP+EAFNF +ANED++ Y +D R + L V DHVSA
Sbjct: 225 DQREAQPLRKVVLTMKSNKLAWNPMEAFNFTVANEDYSLYTFDTRKLQTPLKVHFDHVSA 284
Query: 301 VMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSKYIVSGS 360
V DVD+SPTG E V+ SYDKTIRIY H HSR+IYHTKRMQH+ V +++D++Y+ SGS
Sbjct: 285 VTDVDYSPTGKEFVSASYDKTIRIYNAHHSHSRDIYHTKRMQHVVCVAWSLDNRYVFSGS 344
Query: 361 DDGNVRLWRAKAWERSNAKSTREKNKLEYDEKLKERFKHMPEVRRISRHRHVPKVV---- 416
D+ NVR+W+A A E+ RE+ Y E LK+++ P+++RI+RHR VP+ V
Sbjct: 345 DEMNVRMWKANASEKLGVIRPRERVNFNYQEALKQKYAAHPQIKRIARHRQVPRHVLNAQ 404
Query: 417 KKAQEIKKIEIDSLXXXXXXXXXXXXDMPFLPERKKQIV 455
KK + +K+ E +P++ E+KK ++
Sbjct: 405 KKMRTVKEKE-QVKEANVRKHTKKSKKVPYVSEKKKHVL 442
>CE05083 [A] KOG0268 Sof1-like rRNA processing protein (contains WD40
repeats)
Length = 444
Score = 303 bits (775), Expect = 5e-82
Identities = 165/459 (35%), Positives = 262/459 (56%), Gaps = 22/459 (4%)
Query: 1 MKIKTISRSADDYVPVKSTQESQMPRNLNPALHPFERAREYTKALNATKLERMFAKPFVG 60
MKIK ISR+ + Y + + +++ RN N PF EYT+ALNATKLER+FAKPFV
Sbjct: 1 MKIKVISRNPNTYQRETTDKRNKIVRNFNTPADPFRSQVEYTRALNATKLERVFAKPFVA 60
Query: 61 QLGYGHRDGVYTIAKNYNVLNKLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTP 120
L GH DGV +AK+ N + + + + DG +K WN+++RE ++ AH G+V + +
Sbjct: 61 SLD-GHVDGVQVLAKHPNRPSTVFSGARDGQVKIWNLASRECQATLDAHRGLVNDISIDN 119
Query: 121 SYLSPQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDH 180
+ ENF+ + G D +K W + K +GI+ + H
Sbjct: 120 N----NGENFV-TVGQDNQLKYWKIEGQQ----KTPAHSIAMDGIV---------YGVSH 161
Query: 181 HRQKSNFVTGGAQIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLY 240
S+FVT G I +W R P+ + + G D I+ R N E +++ SD S+ +
Sbjct: 162 LSFSSDFVTCGEDISVWKPYRETPLRSYNLGTDTIHTCRANPVEENVIVGARSDRSIYVL 221
Query: 241 DLRTNSPTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSA 300
D R + P +K+ MR N I WNP+EA+NF +A+ED++ Y +DMR M + + SA
Sbjct: 222 DTRQDVPLKKVTMKMRPNKISWNPMEAYNFTVASEDYSLYTFDMRYMEHPVQSHQGFTSA 281
Query: 301 VMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSKYIVSGS 360
V+DVD+SPTG E V YD++IR+++ + SR++Y+TKRM + V ++ DSK+++SGS
Sbjct: 282 VLDVDYSPTGQEFVAAGYDRSIRLFKARDMTSRDVYYTKRMASVLSVLWSADSKFVLSGS 341
Query: 361 DDGNVRLWRAKAWERSNAKSTREKNKLEYDEKLKERFKHMPEVRRISRHRHVPKVVKKAQ 420
++ N+R+W+A A E+ + REK Y+EKL++ +K+ PEVRRI++HR+VP+ + A
Sbjct: 342 NEMNIRVWKANAAEKLGPLTKREKQAFAYNEKLRDTYKNHPEVRRIAKHRNVPRHIFTAA 401
Query: 421 EIKKIEIDS---LXXXXXXXXXXXXDMPFLPERKKQIVG 456
+ K+ D+ + +LP+ +K +VG
Sbjct: 402 KEHKLIRDARGRRDFRRAKAAGLDEEESYLPQTQKIMVG 440
>ECU02g0240 [A] KOG0268 Sof1-like rRNA processing protein (contains WD40
repeats)
Length = 408
Score = 198 bits (503), Expect = 2e-50
Identities = 127/417 (30%), Positives = 207/417 (49%), Gaps = 37/417 (8%)
Query: 1 MKIKTISRSADDYVPVKSTQESQMPRNLNPALHPFERAREYTKALNATKLERMFAKPFVG 60
MKI TI ++ + + HPF R RE+ +ALNA K+ERM +KPFV
Sbjct: 1 MKISTIYHKPEEVCKERKKDVQYSSFAKDEVYHPFMREREFVRALNAVKIERMLSKPFVA 60
Query: 61 QLGYGHRDGVYTIAKNYNVLNKLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTP 120
L Y H++G++ +A++ + + A+ S DG + W+M R L F+ +
Sbjct: 61 ALSY-HKEGIHVLARHPHQ-SLFASGSFDGQVMLWDMEQRNLLKRFECN----------- 107
Query: 121 SYLSPQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDH 180
N + G D+ +++ + D K +H LD
Sbjct: 108 --------NPIKGLGVDREANVYAGQGKSVRRLGD----------AKVYHCNSEVLDLDM 149
Query: 181 HRQKSNFVTGGAQIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLY 240
+ + G IE++D R P +S + + + G + L+
Sbjct: 150 METLNVGTSKG--IEIFDLERDFPKQQMS---TKYPLCISSSPVLTSIIGVGEQGGLSLF 204
Query: 241 DLRTNSPTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSA 300
D R + +TN I ++P FV +ED Y +D+R + + V++ H +A
Sbjct: 205 DARVGKIVHSVSIGSKTNGISFSP-NGDVFVSGDEDSCIYLHDIRYLHEPSGVYRGHGNA 263
Query: 301 VMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSKYIVSGS 360
V+ V F+ G E+ +GS+DKTIRI+ V SR+ Y+ +RMQ++F VKY+ DS++IVSGS
Sbjct: 264 VLSVAFNSLGTEIASGSFDKTIRIFGVNERKSRDTYYNRRMQNVFGVKYSHDSQFIVSGS 323
Query: 361 DDGNVRLWRAKAWERSNAKSTREKNKLEYDEKLKERFKHMPEVRRISRHRHVPKVVK 417
DDG+VRLW+ A + S +EK+ LEY + LKE+++ + E+RRI++HR +PK +K
Sbjct: 324 DDGSVRLWKGYASRKLGPLSRKEKDALEYSKALKEKYEDVGEIRRIAKHRFLPKPLK 380
>At4g28450 [A] KOG0268 Sof1-like rRNA processing protein (contains WD40
repeats)
Length = 283
Score = 159 bits (403), Expect = 7e-39
Identities = 76/131 (58%), Positives = 98/131 (74%)
Query: 299 SAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSKYIVS 358
SA MD+DFSPTG E VTGSYD+++RI+ GHSREIYHTKRMQ +F VKY+ D+ Y++S
Sbjct: 121 SARMDIDFSPTGREFVTGSYDRSVRIFPYNGGHSREIYHTKRMQRVFCVKYSCDATYVIS 180
Query: 359 GSDDGNVRLWRAKAWERSNAKSTREKNKLEYDEKLKERFKHMPEVRRISRHRHVPKVVKK 418
GSDD N+RLW+AKA E+ RE+ K EY+E +K R+KH+ EV+RI RHRH+PK + K
Sbjct: 181 GSDDTNLRLWKAKASEQLGVILPREQKKHEYNEAVKNRYKHLSEVKRIVRHRHLPKPIYK 240
Query: 419 AQEIKKIEIDS 429
A I + DS
Sbjct: 241 AMGIIRTVNDS 251
Score = 60.1 bits (144), Expect = 7e-09
Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 8/84 (9%)
Query: 36 ERAREYTKALNATKLERMFAKPFVGQLGYGHRDGVYTIAKNYNVLNKLATASGDGVIKYW 95
E+A EY +AL A KLE++FA+PFVG + GHRDGV +AKN N L + +AS DG +
Sbjct: 2 EKAVEYQRALTAAKLEKIFARPFVGAMD-GHRDGVSCMAKNPNYLKGIFSASMDGGLLII 60
Query: 96 NMST----REELSSFKAHYGMVTG 115
++ R EL+ YG++ G
Sbjct: 61 SLKVTFLLRPELNLI---YGIIIG 81
>Hs20543075 [A] KOG0268 Sof1-like rRNA processing protein (contains WD40
repeats)
Length = 162
Score = 114 bits (284), Expect = 4e-25
Identities = 58/177 (32%), Positives = 97/177 (54%), Gaps = 23/177 (12%)
Query: 89 DGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENF----MLSCGDDKTVKLWS 144
DG ++ WN++ + + +AH G V G+ R +F + GDDKTVK W
Sbjct: 5 DGAVRIWNLTQLKCIRIIQAHEGFVQGI----------RAHFCGTSFFTVGDDKTVKQWK 54
Query: 145 VNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFVTGGAQIELWDTNRSKP 204
++ + +EG + T G+ + +DHH +++ F T G Q+++WD + P
Sbjct: 55 MDGPGYGE---------EEGPLHTILGKTVYTGIDHHWKEAVFATCGQQVDIWDEQITNP 105
Query: 205 ISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQTMRTNSIC 261
IS+++W D+I+ +FN E IL S SD + VLYD+R +P +K++ MRTN++C
Sbjct: 106 ISSMTWRFDSISSGKFNAIETFILGSCASDRTTVLYDMRQATPLKKVILDMRTNTVC 162
>Hs7661768 [A] KOG0268 Sof1-like rRNA processing protein (contains WD40
repeats)
Length = 96
Score = 91.7 bits (226), Expect = 2e-18
Identities = 47/90 (52%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 1 MKIKTISRSADDYVPVKSTQESQMPRNLNPALHPFERAREYTKALNATKLERMFAKPFVG 60
MK+K +SR+ D+YV ++PRN +PALHPFE REY +ALNATKLER+FAKPF+
Sbjct: 1 MKVKMLSRNPDNYVRETKLDLQRVPRNYDPALHPFEVPREYIRALNATKLERVFAKPFLA 60
Query: 61 QLGYGHRDGVYTIAKNYNVLNKLATASGDG 90
L GHRDGV +AK+ L + + + DG
Sbjct: 61 SLD-GHRDGVNCLAKHPEKLATVLSGACDG 89
>SPCC18.05c [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 502
Score = 74.3 bits (181), Expect = 4e-13
Identities = 69/299 (23%), Positives = 125/299 (41%), Gaps = 37/299 (12%)
Query: 83 LATASGDGVIKYWNMSTREELS-SFKAHYGMVTGLCVTPSYLSPQRENFMLSCGD-DKTV 140
+AT S D I++W+ + + + H + LC P +L+P ++L+ G D TV
Sbjct: 192 IATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTV 251
Query: 141 KLWSVNSDDFSNVKDDTRLNTDEG-----IIKTFHGEHAFQSLDHHRQKSNFVTGGAQIE 195
++W NVK T L T G + G++ S + + I
Sbjct: 252 RIW--------NVKLRTLLFTLSGHTAPITCVRWGGQNWIYSSSYDKT----------IR 293
Query: 196 LWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQTM 255
+WD K + L A +NH+ + V L S D++ D + S + + +
Sbjct: 294 IWDAKDGKCLHILKGHAARVNHLSLSTEHV--LRSGAYDHT----DFKPKSFSDERRKAK 347
Query: 256 RTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVT 315
C V A++D +D + +K + H V FSP G + T
Sbjct: 348 ERYEACLKQ-SGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIAT 406
Query: 316 GSYDKTIRIYQVKHGHSREIYHTKR--MQHIFQVKYTMDSKYIVSGSDDGNVRLWRAKA 372
S+D ++R++ K G + T R + ++Q ++ DS+ +VS S D +++W ++
Sbjct: 407 ASFDSSVRLWDGKTG---KFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRS 462
Score = 63.5 bits (153), Expect = 6e-10
Identities = 65/272 (23%), Positives = 117/272 (42%), Gaps = 42/272 (15%)
Query: 83 LATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVKL 142
LA+ S D ++ WN+ R L + H +T CV +N++ S DKT+++
Sbjct: 242 LASGSKDNTVRIWNVKLRTLLFTLSGHTAPIT--CVRWG-----GQNWIYSSSYDKTIRI 294
Query: 143 WSVNSDDFSNVKDD--TRLN----TDEGIIKTFHGEHAF---QSLDHHRQKSN------- 186
W ++ R+N + E ++++ +H +S R+K+
Sbjct: 295 WDAKDGKCLHILKGHAARVNHLSLSTEHVLRSGAYDHTDFKPKSFSDERRKAKERYEACL 354
Query: 187 --------FVTGGAQIELWDTNRS-KPISNLSWGADNINHVRFNQNEVDILASTGSDNSV 237
+ Q+ LWD +S KPI+ + +NH F+ + +A+ D+SV
Sbjct: 355 KQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDG-RCIATASFDSSV 413
Query: 238 VLYDLRTNSPTQKIVQTMRTNSI----CWNPVEAFNFVIANEDHNAYYYDMRNMSKALHV 293
L+D +T K + T+R + C ++ V +++D +D+R+ K
Sbjct: 414 RLWDGKTG----KFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRS-KKMKFD 468
Query: 294 FKDHVSAVMDVDFSPTGDEVVTGSYDKTIRIY 325
H V VD+SP G V +G DK +RI+
Sbjct: 469 LPGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
>Hs7108333_2 [R] KOG4155 FOG: WD40 repeat
Length = 668
Score = 73.9 bits (180), Expect = 5e-13
Identities = 75/371 (20%), Positives = 148/371 (39%), Gaps = 53/371 (14%)
Query: 40 EYTKALNATKLERMFAKPFVGQLGYGHRDGVYTIAKNYNVLNKLATASGDGVIKYWNMST 99
E+ N T L R+ +P H D VY + + ++A+ D ++ + T
Sbjct: 16 EWINKKNITNLSRLVVRP--------HTDAVYHACFSEDG-QRIASCGADKTLQVFKAET 66
Query: 100 REELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRL 159
E+L KAH V LC S + F+ +C DK VK+W+ + + + D+
Sbjct: 67 GEKLLEIKAHEDEV--LCCAFS----TDDRFIATCSVDKKVKIWNSMTGELVHTYDE--- 117
Query: 160 NTDEGIIKTFHGEHA----FQSLDHHRQKSNFVTGGAQ--IELWDTNRSKPISNLSWGAD 213
H E F + HH TG + ++LWD N+ + + + +
Sbjct: 118 ----------HSEQVNCCHFTNSSHHLL---LATGSSDCFLKLWDLNQKECRNTMFGHTN 164
Query: 214 NINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQTMRTNSICWNPVEAFNFVI- 272
++NH RF+ ++ +LAS +D ++ L+D T++ +K + + +P E ++
Sbjct: 165 SVNHCRFSPDD-KLLASCSADGTLKLWDA-TSANERKSINVKQFFLNLEDPQEDMEVIVK 222
Query: 273 ------------ANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYDK 320
+ + +D+ + H S + DFSP V
Sbjct: 223 CCSWSADGARIMVAAKNKIFLFDIHTSGLLGEIHTGHHSTIQYCDFSPQNHLAVVALSQY 282
Query: 321 TIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSKYIVSGSDDGNVRLWRAKAWERSNAKS 380
+ ++ S+ + + V ++ D ++ SDD +RLW K +++A
Sbjct: 283 CVELWNTD-SRSKVADCRGHLSWVHGVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSAVM 341
Query: 381 TREKNKLEYDE 391
+++ + + E
Sbjct: 342 LKQEVDVVFQE 352
>Hs4502123_2 [R] KOG4155 FOG: WD40 repeat
Length = 625
Score = 72.8 bits (177), Expect = 1e-12
Identities = 72/308 (23%), Positives = 132/308 (42%), Gaps = 53/308 (17%)
Query: 40 EYTKALNATKLERMFAKPFVGQLGYGHRDGVYTIAKNYNVLNKLATASGDGVIKYWNMST 99
E+ N T L R+ +P H D VY + + ++A+ D ++ + T
Sbjct: 16 EWINKKNITNLSRLVVRP--------HTDAVYHACFSEDG-QRIASCGADKTLQVFKAET 66
Query: 100 REELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRL 159
E+L KAH V LC S + F+ +C DK VK+W+ + + + D+
Sbjct: 67 GEKLLEIKAHEDEV--LCCAFS----TDDRFIATCSVDKKVKIWNSMTGELVHTYDE--- 117
Query: 160 NTDEGIIKTFHGEHA----FQSLDHHRQKSNFVTGGAQ--IELWDTNRSKPISNLSWGAD 213
H E F + HH TG + ++LWD N+ + + + +
Sbjct: 118 ----------HSEQVNCCHFTNSSHHLL---LATGSSDCFLKLWDLNQKECRNTMFGHTN 164
Query: 214 NINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQTMRTNSICWNPVEAFNFVI- 272
++NH RF+ ++ +LAS +D ++ L+D T++ +K + + +P E ++
Sbjct: 165 SVNHCRFSPDD-KLLASCSADGTLKLWDA-TSANERKSINVKQFFLNLEDPQEDMEVIVK 222
Query: 273 ------------ANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYDK 320
+ + ++ + SK + H+S V V FSP G +T S D+
Sbjct: 223 CCSWSADGARIMVAAKNKIFLWNTDSRSKVADC-RGHLSWVHGVMFSPDGSSFLTSSDDQ 281
Query: 321 TIRIYQVK 328
TIR+++ K
Sbjct: 282 TIRLWETK 289
>Hs4758560 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 357
Score = 70.5 bits (171), Expect = 5e-12
Identities = 60/275 (21%), Positives = 116/275 (41%), Gaps = 35/275 (12%)
Query: 65 GHRDGVYTIAKNYNVLNKLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLS 124
GH V + N + + L +AS D + W+ T E + K H V P+ S
Sbjct: 107 GHSGAVMELHYNTDG-SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS--CYPARKS 163
Query: 125 PQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQK 184
PQ + + DD TVKLW + + I+TF + ++ +
Sbjct: 164 PQ---LVCTGSDDGTVKLWDIRK---------------KAAIQTFQNTYQVLAVTFNDTS 205
Query: 185 SNFVTGGA--QIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDL 242
++GG I++WD ++K + AD++ + + +E L S DN+V ++D+
Sbjct: 206 DQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLS-SEGSYLLSNAMDNTVRVWDV 264
Query: 243 RTNSPTQKIVQTMRTN---------SICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHV 293
R +P ++ V+ + N W+P + + D Y +D + + L+
Sbjct: 265 RPFAPKERCVKIFQGNVHNFEKNLLRCSWSP-DGSKIAAGSADRFVYVWDTTS-RRILYK 322
Query: 294 FKDHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVK 328
H ++ +V F P +++ S DK + + +++
Sbjct: 323 LPGHAGSINEVAFHPDEPIIISASSDKRLYMGEIQ 357
Score = 51.6 bits (122), Expect = 3e-06
Identities = 43/251 (17%), Positives = 105/251 (41%), Gaps = 32/251 (12%)
Query: 131 MLSCGDDKTVKLWSV--NSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFV 188
+ S G D+ + LW+V + D+++ +K + A L ++ S
Sbjct: 81 LASAGFDRLILLWNVYGDCDNYATLKGHSG---------------AVMELHYNTDGSMLF 125
Query: 189 TGGAQ--IELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNS 246
+ + +WD+ + + L +N + ++ + D +V L+D+R +
Sbjct: 126 SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARKSPQLVCTGSDDGTVKLWDIRKKA 185
Query: 247 PTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDF 306
Q T + ++ +N + D++ +D+R +K + + H +V +
Sbjct: 186 AIQTFQNTYQVLAVTFNDTSD-QIISGGIDNDIKVWDLRQ-NKLTYTMRGHADSVTGLSL 243
Query: 307 SPTGDEVVTGSYDKTIRIYQVKHGHSRE---------IYHTKRMQHIFQVKYTMDSKYIV 357
S G +++ + D T+R++ V+ +E +++ ++ ++ + ++ D I
Sbjct: 244 SSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEK--NLLRCSWSPDGSKIA 301
Query: 358 SGSDDGNVRLW 368
+GS D V +W
Sbjct: 302 AGSADRFVYVW 312
>CE07020 [R] KOG0288 WD40 repeat protein TipD
Length = 578
Score = 70.5 bits (171), Expect = 5e-12
Identities = 59/290 (20%), Positives = 120/290 (41%), Gaps = 44/290 (15%)
Query: 125 PQRENFMLSC-------------------GDDKTVKLWSVNSDDFSNVKDDTRLNTDEGI 165
P R F+L C G D+ +K+W V+ TR+ T G
Sbjct: 281 PSRAEFVLECEEGEVNDVHWLDGETFATGGSDRNIKIWKVDGHG-----GYTRIGTLAG- 334
Query: 166 IKTFHGEHAFQSLDHHRQKSNFVTGG--AQIELWDTNRSKPISNLSWGADNINHVRFNQN 223
AF +D+ R + +F+ + +W+ + S+ +S LS +D + V+F Q+
Sbjct: 335 -----SNAAFTRIDYERDRKHFIASSNDKNVRIWNLDNSRLLSTLSGHSDQVTCVKFYQS 389
Query: 224 EVDILASTGSDNSVVLYDLRTNSPTQKIVQTMRTNSICWN-PVEAFNFVIANEDHNAYYY 282
+ S +D + ++D++ ++ + + + N F + D +Y
Sbjct: 390 HSAV--SGSADRVIKIWDIQNQRCSRSLFPASKVLDVATNMGASPSLFASGHFDKKLRFY 447
Query: 283 DMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYDKTI-----RIYQVKHGHSREIYH 337
D R+ V D + +D + +G E++ + D TI R +Q H +S E Y
Sbjct: 448 DGRSTDPVRTV--DMGGRITSLDVTMSGCELLVSTRDDTISLIDLRTFQTVHCYSAENYR 505
Query: 338 TKRMQHIFQVKYTMDSKYIVSGSDDGNVRLWRAKAWERSNAKSTREKNKL 387
T + +V + ++Y+ +GS +G++ +W + + + +N +
Sbjct: 506 TS--SDLSRVVLSSGNEYVAAGSSNGSIFVWNRNSTKLEKQLCSNSENAI 553
>At4g02730 [R] KOG0266 WD40 repeat-containing protein
Length = 333
Score = 70.5 bits (171), Expect = 5e-12
Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 4/158 (2%)
Query: 215 INHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIV-QTMRTNSICWNPVEAFNFVIA 273
I+ V+F+ N+ ++LAS D +++L+ S + + + + W+ + A
Sbjct: 46 ISCVKFS-NDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYT-CSA 103
Query: 274 NEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSR 333
++D +D R+ + L V + H + V V+F+P + +V+GS+D+TIRI++VK G
Sbjct: 104 SDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCV 163
Query: 334 EIYHTKRMQHIFQVKYTMDSKYIVSGSDDGNVRLWRAK 371
+ M I V + D IVS S DG+ ++W AK
Sbjct: 164 RMIKAHSMP-ISSVHFNRDGSLIVSASHDGSCKIWDAK 200
Score = 57.8 bits (138), Expect = 4e-08
Identities = 57/251 (22%), Positives = 105/251 (41%), Gaps = 24/251 (9%)
Query: 129 NFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFV 188
N + S DKT+ LWS T+ +I + G + S S++
Sbjct: 56 NLLASASVDKTMILWSA---------------TNYSLIHRYEGHSSGISDLAWSSDSHYT 100
Query: 189 TGGAQ---IELWDTNRSKPISNLSWGADN-INHVRFNQNEVDILASTGSDNSVVLYDLRT 244
+ + +WD + G N + V FN +++ S D ++ +++++T
Sbjct: 101 CSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPS-NLIVSGSFDETIRIWEVKT 159
Query: 245 NSPTQKI-VQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMD 303
+ I +M +S+ +N + V A+ D + +D + + + D AV
Sbjct: 160 GKCVRMIKAHSMPISSVHFNR-DGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSF 218
Query: 304 VDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIY--HTKRMQHIFQVKYTMDSKYIVSGSD 361
FSP G ++ + D T+++ G ++Y HT ++ I + KYIVSGS+
Sbjct: 219 AKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSE 278
Query: 362 DGNVRLWRAKA 372
D V LW +A
Sbjct: 279 DNCVYLWDLQA 289
>7302720 [R] KOG0266 WD40 repeat-containing protein
Length = 307
Score = 70.5 bits (171), Expect = 5e-12
Identities = 49/184 (26%), Positives = 89/184 (47%), Gaps = 5/184 (2%)
Query: 189 TGGAQIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPT 248
+G ++LWD + ++ I +L+ D +N V ++ ++AS D +V L+D R+
Sbjct: 75 SGDRLLKLWDLSATRCIQSLAGHGDGVNDVAWSA--AGLIASCSDDMTVRLWDARSKLCV 132
Query: 249 QKIVQTMRTN-SICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFS 307
+ + R + S C+NP +A + D +D+R K L + H + VDF
Sbjct: 133 KVLEGHSRYSFSCCFNP-QANLLASTSFDETVRLWDVRT-GKTLKIVHAHQDPITSVDFH 190
Query: 308 PTGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSKYIVSGSDDGNVRL 367
G+ VT SYD +R++ GH + + VK++ + +YI+S + + +RL
Sbjct: 191 RDGNIFVTSSYDGLVRLWDSSTGHVLKTLVDVDNIPVGYVKFSPNGRYILSSTLNNTLRL 250
Query: 368 WRAK 371
W K
Sbjct: 251 WNYK 254
Score = 49.7 bits (117), Expect = 1e-05
Identities = 52/254 (20%), Positives = 106/254 (41%), Gaps = 33/254 (12%)
Query: 83 LATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVKL 142
L ++SGD ++K W++S + S H V + + + L + SC DD TV+L
Sbjct: 71 LVSSSGDRLLKLWDLSATRCIQSLAGHGDGVNDVAWSAAGL-------IASCSDDMTVRL 123
Query: 143 WSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFVTGGA---QIELWDT 199
W S + +K G + ++N + + + LWD
Sbjct: 124 WDARS---------------KLCVKVLEGHSRYSFSCCFNPQANLLASTSFDETVRLWDV 168
Query: 200 NRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKI--VQTMRT 257
K + + D I V F++ + +I ++ D V L+D T + + V +
Sbjct: 169 RTGKTLKIVHAHQDPITSVDFHR-DGNIFVTSSYDGLVRLWDSSTGHVLKTLVDVDNIPV 227
Query: 258 NSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSA--VMDVDFSPTGD-EVV 314
+ ++P +++++ +N K + ++ H++ + +FS TG +V
Sbjct: 228 GYVKFSP--NGRYILSSTLNNTLRLWNYKKPKCMRTYRGHLNEFYCSNSNFSTTGGIWIV 285
Query: 315 TGSYDKTIRIYQVK 328
+GS D T+ I+ ++
Sbjct: 286 SGSEDNTLCIWNLQ 299
>Hs18544419 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 446
Score = 69.3 bits (168), Expect = 1e-11
Identities = 72/289 (24%), Positives = 121/289 (40%), Gaps = 46/289 (15%)
Query: 65 GHRDGVYTIAKNYNVLNKLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLS 124
GHR+ VY IA N +K+AT S D K W++ T + +F+ H + L P
Sbjct: 49 GHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNP---- 104
Query: 125 PQRENFMLSCGD-DKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHA-FQSLDHHR 182
++ +++ G D T KLW + N +E + T G A SL +
Sbjct: 105 ---QSTLVATGSMDTTAKLWDIQ-------------NGEE--VYTLRGHSAEIISLSFNT 146
Query: 183 QKSNFVTGGAQ--IELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLY 240
+TG + +WD + + ++ L I+ FN + ++ + D + L+
Sbjct: 147 SGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNW-DCSLILTGSMDKTCKLW 205
Query: 241 DLRTNSPTQKIVQTMRTN-----SICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFK 295
D TN K V T+ + C++ A+ D A + K + +
Sbjct: 206 D-ATNG---KCVATLTGHDDEILDSCFDYTGKL-IATASADGTARIFSAAT-RKCIAKLE 259
Query: 296 DHVSAVMDVDFSPTGDEVVTGSYDKTIRIY--------QVKHGHSREIY 336
H + + F+P G+ ++TGS DKT RI+ QV GH+ EI+
Sbjct: 260 GHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIF 308
Score = 62.8 bits (151), Expect = 1e-09
Identities = 69/299 (23%), Positives = 114/299 (38%), Gaps = 44/299 (14%)
Query: 85 TASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVKLWS 144
T S D K W+ ++ EEL++ + H +V + Y + + + DKT KLWS
Sbjct: 26 TGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPY-----GDKIATGSFDKTCKLWS 80
Query: 145 VNSDDFSNVKDDTRLNTDEGIIKTFHGEHA-FQSLDHHRQKSNFVTGG--AQIELWDTNR 201
V + TF G A L + Q + TG +LWD
Sbjct: 81 VETGK---------------CYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQN 125
Query: 202 SKPISNLSWGADNINHVRFNQNEVDILASTGS-DNSVVLYDLRTNSPTQKIVQTMRTNSI 260
+ + L + I + FN + I+ TGS D++VV++D T ++ S
Sbjct: 126 GEEVYTLRGHSAEIISLSFNTSGDRII--TGSFDHTVVVWDADTGRKVNILIGHCAEISS 183
Query: 261 CWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYDK 320
+ + + D +D N K + H ++D F TG + T S D
Sbjct: 184 ASFNWDCSLILTGSMDKTCKLWDATN-GKCVATLTGHDDEILDSCFDYTGKLIATASADG 242
Query: 321 TIRIYQVK--------HGHSREIYHTKRMQHIFQVKYTMDSKYIVSGSDDGNVRLWRAK 371
T RI+ GH E I ++ + ++++GS D R+W A+
Sbjct: 243 TARIFSAATRKCIAKLEGHEGE---------ISKISFNPQGNHLLTGSSDKTARIWDAQ 292
>Hs13629793 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 357
Score = 68.9 bits (167), Expect = 2e-11
Identities = 59/275 (21%), Positives = 115/275 (41%), Gaps = 35/275 (12%)
Query: 65 GHRDGVYTIAKNYNVLNKLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLS 124
GH V + N + + L +AS D + W+ T E + K H V P+
Sbjct: 107 GHSGAVMELHYNTDG-SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS--CYPARRG 163
Query: 125 PQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQK 184
PQ + + DD TVKLW + + I+TF + ++ +
Sbjct: 164 PQ---LVCTGSDDGTVKLWDIRK---------------KAAIQTFQNTYQVLAVTFNDTS 205
Query: 185 SNFVTGGA--QIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDL 242
++GG I++WD ++K + AD++ + + +E L S DN+V ++D+
Sbjct: 206 DQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLS-SEGSYLLSNAMDNTVRVWDV 264
Query: 243 RTNSPTQKIVQTMRTN---------SICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHV 293
R +P ++ V+ + N W+P + + D Y +D + + L+
Sbjct: 265 RPFAPKERCVKIFQGNVHNFEKNLLRCSWSP-DGSKIAAGSADRFVYVWDTTS-RRILYK 322
Query: 294 FKDHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVK 328
H ++ +V F P +++ S DK + + +++
Sbjct: 323 LPGHAGSINEVAFHPDEPIIISASSDKRLYMGEIQ 357
Score = 50.8 bits (120), Expect = 4e-06
Identities = 43/251 (17%), Positives = 105/251 (41%), Gaps = 32/251 (12%)
Query: 131 MLSCGDDKTVKLWSV--NSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFV 188
+ S G D+ + LW+V + D+++ +K + A L ++ S
Sbjct: 81 LASAGFDRLILLWNVYGDCDNYATLKGHSG---------------AVMELHYNTDGSMLF 125
Query: 189 TGGAQ--IELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNS 246
+ + +WD+ + + L +N + ++ + D +V L+D+R +
Sbjct: 126 SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA 185
Query: 247 PTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDF 306
Q T + ++ +N + D++ +D+R +K + + H +V +
Sbjct: 186 AIQTFQNTYQVLAVTFNDTSD-QIISGGIDNDIKVWDLRQ-NKLTYTMRGHADSVTGLSL 243
Query: 307 SPTGDEVVTGSYDKTIRIYQVKHGHSRE---------IYHTKRMQHIFQVKYTMDSKYIV 357
S G +++ + D T+R++ V+ +E +++ ++ ++ + ++ D I
Sbjct: 244 SSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEK--NLLRCSWSPDGSKIA 301
Query: 358 SGSDDGNVRLW 368
+GS D V +W
Sbjct: 302 AGSADRFVYVW 312
>SPBC713.05 [S] KOG0316 Conserved WD40 repeat-containing protein
Length = 297
Score = 68.2 bits (165), Expect = 3e-11
Identities = 61/242 (25%), Positives = 105/242 (43%), Gaps = 21/242 (8%)
Query: 130 FMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFVT 189
++L+ G+++ V+LW NVK ++ G HG H LD + F +
Sbjct: 28 YVLAAGNERVVRLW--------NVKSGACIHEYAG-----HG-HEILDLDLVYDSTKFAS 73
Query: 190 GGAQ--IELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSP 247
G I++WD N K L IN +R+N++ ILAS D+ V L+D R+NS
Sbjct: 74 CGGDKFIQVWDVNTGKVDRRLGGHLAQINTIRYNEDS-SILASGSFDSKVRLWDCRSNSF 132
Query: 248 TQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFS 307
+ V +S+ + V + D YD+R + + F +++V S
Sbjct: 133 SPIQVLADAKDSVSSIDIAEHLIVTGSTDGTLRTYDIRKGTLSSDYFSHPITSVKT---S 189
Query: 308 PTGDEVVTGSYDKTIRIYQVKHGHSREIY-HTKRMQHIFQVKYTMDSKYIVSGSDDGNVR 366
+ + S + +I + + G + Y K M++ + + + SGS+DG V
Sbjct: 190 KSASFSLISSLNSSIHLLDQETGKILKSYIGLKNMEYRVRSSFNQSETIVFSGSEDGKVY 249
Query: 367 LW 368
LW
Sbjct: 250 LW 251
>7296245 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 347
Score = 68.2 bits (165), Expect = 3e-11
Identities = 53/254 (20%), Positives = 112/254 (43%), Gaps = 34/254 (13%)
Query: 85 TASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVKLWS 144
T S D + +W+++T + FK H V + S + + + S DD+T+K+W
Sbjct: 115 TCSTDKTLAFWDIATGQRQRRFKGHGNFVNSV-----QGSRRGQQLLCSGSDDRTIKIWD 169
Query: 145 VNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFVTGGA--QIELWDTNRS 202
++ L + + G+ Q ++GG ++++WD +
Sbjct: 170 ARKKHAAHT-----LESPFQVTAVCFGDTGEQ----------VISGGIDNEVKIWDIRKQ 214
Query: 203 KPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQTMRTNS--- 259
+ +L +D I + + E D + + DN++ ++D+R +P ++ V+ + +
Sbjct: 215 AVLHHLRGHSDTITGMSLSP-EGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNF 273
Query: 260 ------ICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEV 313
W+P + + D + Y +D+ N + L+ H +V VDFSP +
Sbjct: 274 EKNLLRCAWSP-GSDKITSGSADRHVYIWDV-NTRRILYKLPGHNGSVNAVDFSPKEPLI 331
Query: 314 VTGSYDKTIRIYQV 327
++GS DKT+ + ++
Sbjct: 332 LSGSSDKTLYLGEI 345
Score = 58.2 bits (139), Expect = 3e-08
Identities = 50/256 (19%), Positives = 100/256 (38%), Gaps = 42/256 (16%)
Query: 131 MLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFH----GEHAFQSLDHHRQKSN 186
+LS G D+ + +W V +D NV ++ G + H G H F
Sbjct: 70 LLSSGFDRQIYIWQVY-EDCENVM---AMSGHSGAVMEAHFTPDGSHIFTC--------- 116
Query: 187 FVTGGAQIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNS 246
+ + WD + + +N V+ ++ +L S D ++ ++D R
Sbjct: 117 --STDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKH 174
Query: 247 PTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDF 306
+ + ++C+ + D+ +D+R + LH + H + +
Sbjct: 175 AAHTLESPFQVTAVCFGDTGE-QVISGGIDNEVKIWDIRKQA-VLHHLRGHSDTITGMSL 232
Query: 307 SPTGDEVVTGSYDKTIRIYQVK--------------HGHSREIYHTKRMQHIFQVKYTMD 352
SP GD ++T + D T+R++ V+ H H+ E +++ + ++
Sbjct: 233 SPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFE-------KNLLRCAWSPG 285
Query: 353 SKYIVSGSDDGNVRLW 368
S I SGS D +V +W
Sbjct: 286 SDKITSGSADRHVYIW 301
>Hs16117781 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 707
Score = 67.4 bits (163), Expect = 4e-11
Identities = 66/314 (21%), Positives = 126/314 (40%), Gaps = 40/314 (12%)
Query: 65 GHRDGVYTIAKNYNVLNKLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLS 124
GH D V T + N++ + S D +K W+ T + L + H G V + S
Sbjct: 378 GHDDHVITCLQFCG--NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV--------WSS 427
Query: 125 PQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQK 184
R+N ++S D+T+K+W+ + + I T +G H H +
Sbjct: 428 QMRDNIIISGSTDRTLKVWNAETGE---------------CIHTLYG-HTSTVRCMHLHE 471
Query: 185 SNFVTGG--AQIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDL 242
V+G A + +WD + + L + V+++ V S D V ++D
Sbjct: 472 KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRV---VSGAYDFMVKVWD- 527
Query: 243 RTNSPTQKIVQTMR--TNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSA 300
T+ + T++ TN + + + V + D + +D+ +H H S
Sbjct: 528 ---PETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVET-GNCIHTLTGHQSL 583
Query: 301 VMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSKYIVSGS 360
++ + +V+G+ D T++I+ +K G + + ++++ S
Sbjct: 584 TSGMELKD--NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSS 641
Query: 361 DDGNVRLWRAKAWE 374
DDG V+LW K E
Sbjct: 642 DDGTVKLWDLKTGE 655
>Hs16117779 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 627
Score = 67.4 bits (163), Expect = 4e-11
Identities = 66/314 (21%), Positives = 126/314 (40%), Gaps = 40/314 (12%)
Query: 65 GHRDGVYTIAKNYNVLNKLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLS 124
GH D V T + N++ + S D +K W+ T + L + H G V + S
Sbjct: 298 GHDDHVITCLQFCG--NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV--------WSS 347
Query: 125 PQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQK 184
R+N ++S D+T+K+W+ + + I T +G H H +
Sbjct: 348 QMRDNIIISGSTDRTLKVWNAETGE---------------CIHTLYG-HTSTVRCMHLHE 391
Query: 185 SNFVTGG--AQIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDL 242
V+G A + +WD + + L + V+++ V S D V ++D
Sbjct: 392 KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRV---VSGAYDFMVKVWD- 447
Query: 243 RTNSPTQKIVQTMR--TNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSA 300
T+ + T++ TN + + + V + D + +D+ +H H S
Sbjct: 448 ---PETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVET-GNCIHTLTGHQSL 503
Query: 301 VMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSKYIVSGS 360
++ + +V+G+ D T++I+ +K G + + ++++ S
Sbjct: 504 TSGMELKD--NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSS 561
Query: 361 DDGNVRLWRAKAWE 374
DDG V+LW K E
Sbjct: 562 DDGTVKLWDLKTGE 575
>SPBC1711.16 [S] KOG0270 WD40 repeat-containing protein
Length = 516
Score = 67.0 bits (162), Expect = 6e-11
Identities = 50/238 (21%), Positives = 102/238 (42%), Gaps = 18/238 (7%)
Query: 174 AFQSLDHHRQKSNFVTGGAQ---IELWDTNRSKPISNLSWGADNINHVRFNQNEVDILAS 230
A +L +R N + G+ ++LWD + + + ++ +D ++ + + +L S
Sbjct: 256 AVLALSSNRNAHNLLVSGSADTTLKLWDLSTCNCVKSFTYHSDKVSCLDWYSKAPSVLLS 315
Query: 231 TGSDNSVVLYDLRTNSPTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKA 290
D + + DLR T ++ W+ NF I ++ YY D RN+SK+
Sbjct: 316 GSYDKTAKIADLRLEEAPSSFQVTSDVENVAWDQHSENNFFIGTDNGIVYYCDARNLSKS 375
Query: 291 LHVFKDHVSAVMDVDFSPTGDE-VVTGSYDKTIRIYQVKHGHSREIY-HTKRMQHIFQVK 348
+ + H + + +P+ V TGS D+ ++++ + + + +F
Sbjct: 376 VWQLQAHDGPISCLSVNPSVPSFVATGSTDRVVKLWNTSDSSPKMVVSRDLDVGRVFTCS 435
Query: 349 YTMDSK---YIVSGSDDGNVRLWRA-------KAWERSNAKSTREKNKLEYDEKLKER 396
+T D ++ + G VR+W KA+E ++ T E K E +L++R
Sbjct: 436 FTTDESTAFHLAASGSKGVVRVWDTATNPGVRKAFE---SRVTEEVTKKERIVQLEDR 490
>At3g15610 [I] KOG0278 Serine/threonine kinase receptor-associated protein
Length = 341
Score = 67.0 bits (162), Expect = 6e-11
Identities = 70/292 (23%), Positives = 120/292 (40%), Gaps = 22/292 (7%)
Query: 65 GHRDGVYTIAKNYNVLNKLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLS 124
GH+ V++ + N L + A+AS D K W+ T + L SF+ H +V +
Sbjct: 59 GHKGAVWSSCLDNNAL-RAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFS----- 111
Query: 125 PQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQK 184
Q ++++ G +K ++++ +N D T ++ G I+T H Q++
Sbjct: 112 -QDTKYLITGGFEKILRVFDLNRLD----APPTEIDKSPGSIRTLTWLHGDQTI------ 160
Query: 185 SNFVTGGAQIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRT 244
+ T + LWD K + L + + +Q+ I + GS +V +D
Sbjct: 161 LSSCTDIGGVRLWDVRSGKIVQTLETKSP-VTSAEVSQDGRYITTADGS--TVKFWDANH 217
Query: 245 NSPTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDV 304
+ S P FV ED +D K + K H V V
Sbjct: 218 FGLVKSYDMPCNIESASLEPKSGNKFVAGGEDMWVRLFDFHT-GKEIGCNKGHHGPVHCV 276
Query: 305 DFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSKYI 356
F+PTG+ +GS D TIRI+Q + EI +K Q + +V ++ +I
Sbjct: 277 RFAPTGESYASGSEDGTIRIWQTGPVNPEEISESKPKQSVDEVARKIEGFHI 328
Score = 55.5 bits (132), Expect = 2e-07
Identities = 68/320 (21%), Positives = 123/320 (38%), Gaps = 50/320 (15%)
Query: 83 LATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVKL 142
L +AS D N T + + +F+ H G V C+ + L S D + KL
Sbjct: 34 LISASKDSQPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAA------SASADFSAKL 87
Query: 143 WSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFVTGGAQ--IELWDTN 200
W + D ++ +F +H ++ + +TGG + + ++D N
Sbjct: 88 WDALTGD---------------VLHSFEHKHIVRACAFSQDTKYLITGGFEKILRVFDLN 132
Query: 201 R-SKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQTMRTNS 259
R P + + +I + + + IL+S V L+D+R+ KIVQT+ T S
Sbjct: 133 RLDAPPTEIDKSPGSIRTLTWLHGDQTILSSCTDIGGVRLWDVRSG----KIVQTLETKS 188
Query: 260 ICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFS----------PT 309
PV + A + Y + S +H V D +
Sbjct: 189 ----PVTS-----AEVSQDGRYITTADGSTVKFWDANHFGLVKSYDMPCNIESASLEPKS 239
Query: 310 GDEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQH-IFQVKYTMDSKYIVSGSDDGNVRLW 368
G++ V G D +R++ G +EI K + V++ + SGS+DG +R+W
Sbjct: 240 GNKFVAGGEDMWVRLFDFHTG--KEIGCNKGHHGPVHCVRFAPTGESYASGSEDGTIRIW 297
Query: 369 RAKAWERSNAKSTREKNKLE 388
+ ++ K ++
Sbjct: 298 QTGPVNPEEISESKPKQSVD 317
>Hs5032159 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 577
Score = 65.9 bits (159), Expect = 1e-10
Identities = 68/324 (20%), Positives = 132/324 (39%), Gaps = 33/324 (10%)
Query: 65 GHRDGVYTIAKNYNVLNKLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLS 124
GH V+ A N V + LA+ SGD + WN++ S + +V C+
Sbjct: 230 GHESEVFICAWN-PVSDLLASGSGDSTARIWNLNENSNGGSTQ----LVLRHCI------ 278
Query: 125 PQRENFMLSCGDDKTVKLWSVNSDDFSNVKDD--TRLNTDEGIIKTFHGEHA--FQSLDH 180
+ + D T W+ N + D R+ T++G + + G+H +L
Sbjct: 279 -REGGHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKW 337
Query: 181 HRQKSNFVTGGAQIE--LWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVV 238
+R+ + ++ G +WD + + + + V + N AS +D +
Sbjct: 338 NRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTT--FASCSTDMCIH 395
Query: 239 LYDLRTNSPTQKIV-QTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDH 297
+ L + P + T N+I W+P ++D + M+ +H + H
Sbjct: 396 VCRLGCDRPVKTFQGHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSMKQ-EVCIHDLQAH 453
Query: 298 VSAVMDVDFSPTGDE---------VVTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVK 348
+ + +SPTG + + S+D T+R++ ++ G TK + ++ V
Sbjct: 454 NKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTL-TKHQEPVYSVA 512
Query: 349 YTMDSKYIVSGSDDGNVRLWRAKA 372
++ D KY+ SGS D V +W ++
Sbjct: 513 FSPDGKYLASGSFDKCVHIWNTQS 536
Score = 55.5 bits (132), Expect = 2e-07
Identities = 65/319 (20%), Positives = 122/319 (37%), Gaps = 47/319 (14%)
Query: 67 RDGVYTIAKNYNVLNK--------LATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCV 118
R+G + + N +V + LAT S DG + W S+ H G + L
Sbjct: 279 REGGHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKW 337
Query: 119 TPSYLSPQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSL 178
++ N++LS G DKT +W ++ G K H+ +L
Sbjct: 338 N------RKGNYILSAGVDKTTIIWDAHT----------------GEAKQQFPFHSAPAL 375
Query: 179 DHHRQKSNFVTGGAQ---IELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSD- 234
D Q + + I + +P+ + +N ++++ + + +LAS D
Sbjct: 376 DVDWQNNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGM-LLASCSDDM 434
Query: 235 --------NSVVLYDLRTNSPTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRN 286
V ++DL+ ++ ++ T NP A+ D +D+
Sbjct: 435 TLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIER 494
Query: 287 MSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQ 346
H H V V FSP G + +GS+DK + I+ + G+ ++ + IF+
Sbjct: 495 -GVCTHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGNL--VHSYRGTGGIFE 551
Query: 347 VKYTMDSKYIVSGSDDGNV 365
V + + + + DG+V
Sbjct: 552 VCWNARGDKVGASASDGSV 570
>SPAC29E6.01 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 506
Score = 65.5 bits (158), Expect = 2e-10
Identities = 46/182 (25%), Positives = 91/182 (49%), Gaps = 9/182 (4%)
Query: 194 IELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQ 253
+ +WD N + L + ++ + F + ++L S SD++++++D + P + V
Sbjct: 243 VSVWDVNSRFILYKLYGHSGSVLCLDFCRRR-NLLVSGSSDSTIIIWDWQNRRPLK--VY 299
Query: 254 TMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKA---LHVFKDHVSAVMDVDFSPTG 310
T+++ V + ++ DH A + + S A +HV + H+++V V +S
Sbjct: 300 FGHTDNVLGVVVSENYIISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSVQYSSKT 359
Query: 311 DEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSKYIVSGSDDGNVRLWRA 370
+VT S D+T+R + + GH I H + I +Y + K+IVSGS D +R++ A
Sbjct: 360 GLIVTASSDRTLRTWDITTGHCIRIIHA-HQRGIACAQY--NGKFIVSGSSDLTIRIFEA 416
Query: 371 KA 372
+
Sbjct: 417 SS 418
Score = 62.0 bits (149), Expect = 2e-09
Identities = 64/286 (22%), Positives = 122/286 (42%), Gaps = 34/286 (11%)
Query: 128 ENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNF 187
+ M+S D+TV +W VNS + K + + LD R+++
Sbjct: 231 DEIMVSGSKDRTVSVWDVNSRFI--------------LYKLYGHSGSVLCLDFCRRRNLL 276
Query: 188 VTGGAQ--IELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTN 245
V+G + I +WD +P+ DN+ V ++N + S+ D++ ++ L
Sbjct: 277 VSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGVVVSENYI---ISSSRDHTARVWRLDAT 333
Query: 246 SPTQKIVQTMRTNSICWNPVEAFN----FVIANEDHNAYYYDMRNMSKALHVFKDHVSAV 301
SP + + +R + N V+ + V A+ D +D+ + + H +
Sbjct: 334 SPAEACMHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITT-GHCIRIIHAHQRGI 392
Query: 302 MDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSKYIVSGSD 361
++ G +V+GS D TIRI++ G + + + + + + D K IVSG
Sbjct: 393 ACAQYN--GKFIVSGSSDLTIRIFEASSG--KLLRMLQGHEDLIRTVRFNDEK-IVSGGY 447
Query: 362 DGNVRLWRAKAWER----SNAKSTREKNKLEYDEKLKERFKHMPEV 403
DG VR+W E+ N++++R L++D + H E+
Sbjct: 448 DGTVRIWNFNTGEQHCVLHNSRNSRVFG-LQFDHRRIIACTHSSEI 492
>Hs14150114 [S] KOG0316 Conserved WD40 repeat-containing protein
Length = 315
Score = 65.1 bits (157), Expect = 2e-10
Identities = 59/246 (23%), Positives = 97/246 (38%), Gaps = 27/246 (10%)
Query: 129 NFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLD--HHRQKSN 186
N+ L+CG DKT+KLW N G + + H ++ LD S+
Sbjct: 38 NYCLTCGSDKTLKLW----------------NPLRGTLLRTYSGHGYEVLDAAGSFDNSS 81
Query: 187 FVTGGAQ--IELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRT 244
+GG + LWD + + A +N V+FN+ E ++ S D+S+ +D R+
Sbjct: 82 LCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNE-EATVILSGSIDSSIRCWDCRS 140
Query: 245 NSPTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHV-SAVMD 303
P + + V + + D YD+R +F D+V S +
Sbjct: 141 RRPEPVQTLDEARDGVSSVKVSDHEILAGSVDGRVRRYDLR----MGQLFSDYVGSPITC 196
Query: 304 VDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYH-TKRMQHIFQVKYTMDSKYIVSGSDD 362
FS G + S D T+R+ G Y K ++ + ++VS S+D
Sbjct: 197 TCFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYKGHKNQEYKLDCCLSERDTHVVSCSED 256
Query: 363 GNVRLW 368
G V W
Sbjct: 257 GKVFFW 262
>7302603 [R] KOG0289 mRNA splicing factor
Length = 505
Score = 64.7 bits (156), Expect = 3e-10
Identities = 61/248 (24%), Positives = 106/248 (42%), Gaps = 28/248 (11%)
Query: 85 TASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVKLWS 144
T S D I+ W++ T + + H G VTGL + P+ +++LS DK W+
Sbjct: 282 TGSPDMNIRIWHVPTSQTQLLLRCHEGPVTGLSLHPT------GDYLLSTSSDKH---WA 332
Query: 145 VNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFVTG--GAQIELWDTNRS 202
FS+++ L +I T E + H F TG +Q+++WD
Sbjct: 333 -----FSDIRTGRLLTK---VIDT--AEVGLTTAQFHPDGLIFGTGTVDSQVKIWDLKEQ 382
Query: 203 KPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLR--TNSPTQKIVQTMRTNSI 260
++N I+ + F++N LA+ D V L+DLR N T ++ +
Sbjct: 383 SNVANFPGHTGPISAISFSENGY-YLATAADDACVKLWDLRKLKNFKTIQLDDGYEVKDL 441
Query: 261 CWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYDK 320
C++ + IA D Y + + L VF DH + V F + + S D+
Sbjct: 442 CFDQSGTY-LAIAGSDVRVY---LCKQWQELKVFNDHTALATGVRFGKHAQYLASTSMDR 497
Query: 321 TIRIYQVK 328
T+++Y ++
Sbjct: 498 TLKLYAIE 505
>7292465 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 1326
Score = 64.7 bits (156), Expect = 3e-10
Identities = 73/349 (20%), Positives = 137/349 (38%), Gaps = 43/349 (12%)
Query: 27 NLNPALHPFERAREYTKALNATKLERMFAKPFVGQLGYGHRDGVYTIAKNYNVLNKLATA 86
N+ P P++ A + R KP V + GH D V T + N++ +
Sbjct: 957 NMPPIASPWKAAYMRQHIIEMNWRSRPVRKPKVLK---GHDDHVITCLQFSG--NRIVSG 1011
Query: 87 SGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVKLWSVN 146
S D +K W+ + L + H G V + S N ++S D+T+K+W ++
Sbjct: 1012 SDDNTLKVWSAVNGKCLRTLVGHTGGV--------WSSQMSGNIIISGSTDRTLKVWDMD 1063
Query: 147 SDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFVTGG--AQIELWDTNRSKP 204
S + T G H H S V+G A + +WD +
Sbjct: 1064 SG---------------ACVHTLQG-HTSTVRCMHLHGSKVVSGSRDATLRVWDIEQGSC 1107
Query: 205 ISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQTMR--TNSICW 262
+ L ++ VR Q + ++ S D V ++ + Q+ + T++ TN +
Sbjct: 1108 LHVL---VGHLAAVRCVQYDGKLIVSGAYDYMVKIW----HPERQECLHTLQGHTNRVYS 1160
Query: 263 NPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYDKTI 322
+ + V + D + +D+ H H S ++ + +V+G+ D T+
Sbjct: 1161 LQFDGLHVVSGSLDTSIRVWDVET-GNCKHTLMGHQSLTSGMELRQ--NILVSGNADSTV 1217
Query: 323 RIYQVKHGHSREIYHTKRMQHIFQVKYTMDSKYIVSGSDDGNVRLWRAK 371
+++ + G + H +S+++V+ SDDG V+LW K
Sbjct: 1218 KVWDITTGQCLQTLSGPNKHHSAVTCLQFNSRFVVTSSDDGTVKLWDVK 1266
>YNL317w [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 465
Score = 64.3 bits (155), Expect = 4e-10
Identities = 68/318 (21%), Positives = 133/318 (41%), Gaps = 26/318 (8%)
Query: 14 VPVKSTQ-ESQMPRNLNPALHPFERAREYTKALNATKLERMFAKPFVGQLGYGHRDGVYT 72
+P K T S +++ PA+ R A + + A F + D T
Sbjct: 80 LPSKFTHLSSNKVKHVIPAIQWTPEGRRLVVATYSGEFSLWNASSFTFETLMQAHDSAVT 139
Query: 73 IAKNYNVLNKLATASGDGVIKYW--NMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENF 130
K + + + + DG+IK W N S +E+ + AH + + + + ++
Sbjct: 140 TMKYSHDSDWMISGDADGMIKIWQPNFSMVKEIDA--AHTESIRDMAFSSN------DSK 191
Query: 131 MLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFVTG 190
++C DD +K+W+ FSN K + L+ +K+ H L K N V
Sbjct: 192 FVTCSDDNILKIWN-----FSNGKQERVLSGHHWDVKSCDW-HPEMGLIASASKDNLV-- 243
Query: 191 GAQIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQK 250
+LWD IS++ + RF + ++L + D S ++D+R +
Sbjct: 244 ----KLWDPRSGNCISSILKFKHTVLKTRFQPTKGNLLMAISKDKSCRVFDIRYSMKELM 299
Query: 251 IVQTMRT-NSICWNPVEAFNFVIANEDHNAYYYD-MRNMSK-ALHVFKDHVSAVMDVDFS 307
V+ ++ W+P+ F +A D + ++D ++N+++ L + H + + ++
Sbjct: 300 CVRDETDYMTLEWHPINESMFTLACYDGSLKHFDLLQNLNEPILTIPYAHDKCITSLSYN 359
Query: 308 PTGDEVVTGSYDKTIRIY 325
P G T + D+TIR +
Sbjct: 360 PVGHIFATAAKDRTIRFW 377
>At2g41500 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 554
Score = 64.3 bits (155), Expect = 4e-10
Identities = 75/316 (23%), Positives = 125/316 (38%), Gaps = 40/316 (12%)
Query: 83 LATASGDGVIKYWNM-STREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVK 141
LAT S GV K W M ++ K H T + +P ++ + + D+T K
Sbjct: 270 LATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPV------DDCLATASADRTAK 323
Query: 142 LWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFVTGGAQI-ELWDTN 200
LW D T L T EG H + + H K T + LWD N
Sbjct: 324 LWKT---------DGTLLQTFEG-----HLDRLARVAFHPSGKYLGTTSYDKTWRLWDIN 369
Query: 201 RSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQTMR-TNS 259
+ + ++ + F Q+ + AS G D+ ++DLRT ++ S
Sbjct: 370 TGAELLLQEGHSRSVYGIAFQQDGA-LAASCGLDSLARVWDLRTGRSILVFQGHIKPVFS 428
Query: 260 ICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSP-TGDEVVTGSY 318
+ ++P ++ ED+ +D+R M K+L++ H + V V + P G + T SY
Sbjct: 429 VNFSP-NGYHLASGGEDNQCRIWDLR-MRKSLYIIPAHANLVSQVKYEPQEGYFLATASY 486
Query: 319 DKTIRIYQVKHGHSREIYHTKRM----QHIFQVKYTMDSKYIVSGSDDGNVRLWRAKAWE 374
D + I+ R+ K + + + T DS I + S D ++LW +
Sbjct: 487 DMKVNIWS-----GRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTSS--- 538
Query: 375 RSNAKSTREKNKLEYD 390
N EK ++ D
Sbjct: 539 -GNDDEDEEKETMDID 553
>7293972 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 553
Score = 64.3 bits (155), Expect = 4e-10
Identities = 66/299 (22%), Positives = 114/299 (38%), Gaps = 68/299 (22%)
Query: 83 LATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENF--MLSCGDDKTV 140
L T+S G+ K W++ E + + H V G+ + P + EN M S G D V
Sbjct: 276 LLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRPG-VKADEENVVAMASGGHDGAV 334
Query: 141 KLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFVTG--GAQIELWD 198
KLW N+++ ++ D T H H + H T + LWD
Sbjct: 335 KLWGFNNEE--SIADITG-----------HMPHRVSKVAFHPSGRFLATACYDSSWRLWD 381
Query: 199 TNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQTMRTN 258
+ + + A ++ + ++ ++ +L + G D ++DLRT
Sbjct: 382 LEQKTEVLHQEGHAKPVHCLSYH-SDGSVLVTGGLDAFGRVWDLRTG------------- 427
Query: 259 SICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSY 318
+ + + H+ AV VDFSP G + TGS
Sbjct: 428 ------------------------------RCIMFLEGHLGAVFGVDFSPNGFHIATGSQ 457
Query: 319 DKTIRIYQVKHGHSREIYHT--KRMQHIFQVKYTMD-SKYIVSGSDDGNVRLWRAKAWE 374
D T +I+ ++ R+ +T I VKY + ++V+ S D ++W K W+
Sbjct: 458 DNTCKIWDLRR---RQPVYTIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQ 513
Score = 60.1 bits (144), Expect = 7e-09
Identities = 59/250 (23%), Positives = 98/250 (38%), Gaps = 26/250 (10%)
Query: 81 NKLATASG--DGVIKYWNMSTREELSSFKAHY-GMVTGLCVTPSYLSPQRENFMLSCGDD 137
N +A ASG DG +K W + E ++ H V+ + PS F+ + D
Sbjct: 321 NVVAMASGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPS------GRFLATACYD 374
Query: 138 KTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFVTGGAQI--E 195
+ +LW +++ T + EG K H L +H S VTGG
Sbjct: 375 SSWRLW--------DLEQKTEVLHQEGHAKPVH------CLSYHSDGSVLVTGGLDAFGR 420
Query: 196 LWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQTM 255
+WD + I L + V F+ N I A+ DN+ ++DLR P I
Sbjct: 421 VWDLRTGRCIMFLEGHLGAVFGVDFSPNGFHI-ATGSQDNTCKIWDLRRRQPVYTIPAHT 479
Query: 256 RTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVT 315
S E +F++ + + L + H + V+ VD +P + T
Sbjct: 480 NLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDIAPNSQYIAT 539
Query: 316 GSYDKTIRIY 325
S+D+T +++
Sbjct: 540 TSFDRTFKLW 549
>SPAC57A10.05c [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 605
Score = 63.9 bits (154), Expect = 5e-10
Identities = 71/312 (22%), Positives = 134/312 (42%), Gaps = 53/312 (16%)
Query: 65 GHRDGVYTIAKNYNVLNKLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLS 124
GH DGV + V N LA+ S D I+ WN++T ++++ + H VT L L
Sbjct: 271 GHSDGVMCLQL---VRNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFDQCKL- 326
Query: 125 PQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQK 184
+S DKT+++W+ + + ++ +TD + TF
Sbjct: 327 -------ISGSMDKTIRIWNYRTSECISILHG---HTDSVLCLTF-------------DS 363
Query: 185 SNFVTGGAQ--IELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVV-LYD 241
+ V+G A ++LW + K I+ L +N VR ++ +L+ GSD+S + ++
Sbjct: 364 TLLVSGSADCTVKLWHFSGGKRIT-LRGHTGPVNSVRIIRDRGLVLS--GSDDSTIKIWS 420
Query: 242 LRTNSPTQKIVQTMRTNSICWNPVEAF-----NFVIANEDHNAYYYDMRNMSKALHVFKD 296
L TN+ + T S PV++ + D +D+ K +H
Sbjct: 421 LETNT-------CLHTFSAHIGPVQSLALADSRLFSCSLDGTIKQWDIEK-KKCVHTLFG 472
Query: 297 HVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSKYI 356
H+ V ++ +++G++D +++++ + E HT + + +
Sbjct: 473 HIEGVWEIAADHL--RLISGAHDGVVKVWE-----ACECVHTLKNHSEPVTSVALGDCEV 525
Query: 357 VSGSDDGNVRLW 368
VSGS+DG + LW
Sbjct: 526 VSGSEDGKIYLW 537
>Hs20149592 [I] KOG0278 Serine/threonine kinase receptor-associated protein
Length = 350
Score = 63.9 bits (154), Expect = 5e-10
Identities = 62/266 (23%), Positives = 107/266 (39%), Gaps = 25/266 (9%)
Query: 65 GHRDGVYTIAKNYNVLNKLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLS 124
GH+ V+ N + K ATA+ D K W+ + +EL + AH +V + T
Sbjct: 57 GHKGAVWGATLNKDA-TKAATAAADFTAKVWDAVSGDELMTL-AHKHIVKTVDFT----- 109
Query: 125 PQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQK 184
Q N++L+ G DK ++++ +N K + G H ++L K
Sbjct: 110 -QDSNYLLTGGQDKLLRIYDLN-------KPEAEPKEISG-----HTSGIKKALWCSEDK 156
Query: 185 SNFVTGGAQIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRT 244
+ LWD + +L++ + + E+ ++ S+ + +
Sbjct: 157 QILSADDKTVRLWDHATMTEVKSLNFNMSVSSMEYIPEGEILVITY---GRSIAFHSAVS 213
Query: 245 NSPTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDV 304
P + NS +P + F V ED Y YD N + L +K H + V
Sbjct: 214 LDPIKSFEAPATINSASLHPEKEF-LVAGGEDFKLYKYDY-NSGEELESYKGHFGPIHCV 271
Query: 305 DFSPTGDEVVTGSYDKTIRIYQVKHG 330
FSP G+ +GS D T+R++Q G
Sbjct: 272 RFSPDGELYASGSEDGTLRLWQTVVG 297
>CE17294 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 473
Score = 63.9 bits (154), Expect = 5e-10
Identities = 66/313 (21%), Positives = 129/313 (41%), Gaps = 33/313 (10%)
Query: 66 HRDGVYTIAKNYNVLNKLATASGDGVIKYWNMSTREELS-SFKAHYGMVTGLCVTPSYLS 124
H+ V IA + + K+A+A +G I WN T E++ + K H +T L P +
Sbjct: 146 HKSWVLCIAWSPDA-TKIASACKNGEICIWNAKTGEQIGKTLKRHKQWITSLAWQPMHKD 204
Query: 125 PQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQK 184
P + SCG D + +W +T +G + H
Sbjct: 205 PTCR-LLASCGKDGNIFIW----------------DTVQGTVVRCLSGHTASVTCLRWGG 247
Query: 185 SNFVTGGAQ---IELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYD 241
+ G+Q +++W + N++ A IN + N + L ++ + S
Sbjct: 248 EGLIYSGSQDRTVKMWRADDGVMCRNMTGHAHWINTLALNTDYA--LRTSCFEPSKRCIK 305
Query: 242 LRTNSPTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAV 301
T QK+ QT ++ V ++D + ++ + ++++ H+ V
Sbjct: 306 PDTVEECQKVAQTRYEAAL--EIAGGERLVSGSDDFTLFMWNPKETKQSINRMTGHMQLV 363
Query: 302 MDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQHI---FQVKYTMDSKYIVS 358
V FSP + + S+DK+++++ + G Y H+ +QV ++ DS+ +VS
Sbjct: 364 NQVVFSPDTRYIASASFDKSVKLWCGRTGK----YLASLRGHVGPVYQVAWSADSRLLVS 419
Query: 359 GSDDGNVRLWRAK 371
GS D ++++ K
Sbjct: 420 GSADSTLKVFELK 432
>Hs16554627 [R] KOG0266 WD40 repeat-containing protein
Length = 334
Score = 63.2 bits (152), Expect = 8e-10
Identities = 62/297 (20%), Positives = 111/297 (36%), Gaps = 69/297 (23%)
Query: 83 LATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVKL 142
LA++S D +IK W + + H ++ + + N ++S DDKT+K+
Sbjct: 60 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD------SNLLVSASDDKTLKI 113
Query: 143 WSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFVTGGA---QIELWDT 199
W V+S +KT G + + +SN + G+ + +WD
Sbjct: 114 WDVSSGK---------------CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 200 NRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQTMRTNS 259
K + L +D ++ V FN+ + ++ S+ D ++D + Q ++T
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASG-------QCLKTLI 210
Query: 260 ICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYD 319
NP +F V FSP G ++ + D
Sbjct: 211 DDDNPPVSF-----------------------------------VKFSPNGKYILAATLD 235
Query: 320 KTIRIYQVKHGHSREIY--HTKRMQHIFQVKYTMDSKYIVSGSDDGNVRLWRAKAWE 374
T++++ G + Y H IF K+IVSGS+D V +W + E
Sbjct: 236 NTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE 292
Score = 53.1 bits (126), Expect = 9e-07
Identities = 39/155 (25%), Positives = 76/155 (48%), Gaps = 5/155 (3%)
Query: 215 INHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIV-QTMRTNSICWNPVEAFNFVIA 273
++ V+F+ N + LAS+ +D + ++ + I + + + W+ ++ V A
Sbjct: 48 VSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS-DSNLLVSA 105
Query: 274 NEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSR 333
++D +D+ + K L K H + V +F+P + +V+GS+D+++RI+ VK G
Sbjct: 106 SDDKTLKIWDVSS-GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCL 164
Query: 334 EIYHTKRMQHIFQVKYTMDSKYIVSGSDDGNVRLW 368
+ + V + D IVS S DG R+W
Sbjct: 165 KTL-PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 198
Score = 49.7 bits (117), Expect = 1e-05
Identities = 59/272 (21%), Positives = 114/272 (41%), Gaps = 35/272 (12%)
Query: 65 GHRDGVYTIAKNYNVLNKLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLS 124
GH+ G+ +A + + N L +AS D +K W++S+ + L + K H V C +
Sbjct: 85 GHKLGISDVAWSSDS-NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV--FCCN---FN 138
Query: 125 PQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQK 184
PQ N ++S D++V++W V + +KT S H +
Sbjct: 139 PQ-SNLIVSGSFDESVRIWDVKTGK---------------CLKTLPAHSDPVSAVHFNRD 182
Query: 185 SNFVTGGAQ---IELWDTNRSKPISNLSWGADN--INHVRFNQNEVDILASTGSDNSVVL 239
+ + + +WDT + + L DN ++ V+F+ N ILA+T DN++ L
Sbjct: 183 GSLIVSSSYDGLCRIWDTASGQCLKTLI-DDDNPPVSFVKFSPNGKYILAAT-LDNTLKL 240
Query: 240 YDLRTNSPTQKIVQTMRTNSICW---NPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKD 296
+D + K + C V ++++ + N Y + + +
Sbjct: 241 WDY-SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQG 299
Query: 297 HVSAVMDVDFSPTGDEVVTGSY--DKTIRIYQ 326
H V+ PT + + + + DKTI++++
Sbjct: 300 HTDVVISTACHPTENIIASAALENDKTIKLWK 331
>At3g49660 [R] KOG0266 WD40 repeat-containing protein
Length = 317
Score = 63.2 bits (152), Expect = 8e-10
Identities = 66/304 (21%), Positives = 131/304 (42%), Gaps = 42/304 (13%)
Query: 83 LATASGDGVIKYWNMST-----REELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDD 137
LA+AS D I+ + ++T E + F H ++ + + F++S DD
Sbjct: 39 LASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSD------ARFIVSASDD 92
Query: 138 KTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFVTGGA---QI 194
KT+KLW V + +IKT G + + +SN + G+ +
Sbjct: 93 KTLKLWDVETGS---------------LIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETV 137
Query: 195 ELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIV-- 252
+WD K + L +D + V FN++ ++ S+ D ++D T + ++
Sbjct: 138 RIWDVTTGKCLKVLPAHSDPVTAVDFNRDG-SLIVSSSYDGLCRIWDSGTGHCVKTLIDD 196
Query: 253 QTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVD--FSPT- 309
+ + + ++P F ++ D+ +++ + +K L + HV+A + FS T
Sbjct: 197 ENPPVSFVRFSPNGKF-ILVGTLDNTLRLWNISS-AKFLKTYTGHVNAQYCISSAFSVTN 254
Query: 310 GDEVVTGSYDKTIRIYQVKHGHSREIYHTKR--MQHIFQVKYTMDSKYIVSGSDDGNVRL 367
G +V+GS D + ++++ +S+++ + + V I SGS D VR+
Sbjct: 255 GKRIVSGSEDNCVHMWEL---NSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRI 311
Query: 368 WRAK 371
W K
Sbjct: 312 WTQK 315
Score = 54.3 bits (129), Expect = 4e-07
Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 8/159 (5%)
Query: 215 INHVRFNQNEVDILASTGSDNSVVLYDLRT-NSPTQKIVQTMRTNSICWNPV----EAFN 269
++ V+F+ ++ +LAS +D ++ Y + T N P + VQ + + V +A
Sbjct: 27 VSSVKFS-SDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARF 85
Query: 270 FVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKH 329
V A++D +D+ S + H + V+F+P + +V+GS+D+T+RI+ V
Sbjct: 86 IVSASDDKTLKLWDVETGS-LIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTT 144
Query: 330 GHSREIYHTKRMQHIFQVKYTMDSKYIVSGSDDGNVRLW 368
G ++ + V + D IVS S DG R+W
Sbjct: 145 GKCLKVL-PAHSDPVTAVDFNRDGSLIVSSSYDGLCRIW 182
>7296187 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 481
Score = 63.2 bits (152), Expect = 8e-10
Identities = 65/292 (22%), Positives = 116/292 (39%), Gaps = 75/292 (25%)
Query: 82 KLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVK 141
KLA+ASGDG + W++ + L + H VT + + L + + D+TVK
Sbjct: 216 KLASASGDGDCRIWDVKLGQCLMNIAGHTNAVTAVRWGGAGL-------IYTSSKDRTVK 268
Query: 142 LWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFVTGGAQIELWDTNR 201
+W D + +TF G HA
Sbjct: 269 MWRA---------------ADGILCRTFSG-HAH-------------------------- 286
Query: 202 SKPISNLSWGADNINHVRFNQNEVDILASTG-----SDNSVVLYDLRTNSPTQKIVQTMR 256
W +N++ + D + TG D S L T + ++ R
Sbjct: 287 --------W----VNNIALS---TDYVLRTGPFHPVKDRSKSHLSLSTEELQESALK--R 329
Query: 257 TNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTG 316
++C + VE+ +++ D N Y N +K + H + V DV +SP + +
Sbjct: 330 YQAVCPDEVES---LVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASA 386
Query: 317 SYDKTIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSKYIVSGSDDGNVRLW 368
S+DK++R+++ G + +Q ++ V ++ DS+ IVSGS D +++W
Sbjct: 387 SFDKSVRLWRASDGQYMATFR-GHVQAVYTVAWSADSRLIVSGSKDSTLKVW 437
>At2g43770 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 343
Score = 62.8 bits (151), Expect = 1e-09
Identities = 50/258 (19%), Positives = 103/258 (39%), Gaps = 34/258 (13%)
Query: 81 NKLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTV 140
+++ +AS D ++ W++ T +++ H V C P+ P ++S DD T
Sbjct: 109 SQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCC--PTRRGPP---LIISGSDDGTA 163
Query: 141 KLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFVTGGA--QIELWD 198
KLW + G I+TF ++ ++ TGG +++WD
Sbjct: 164 KLWDMR---------------QRGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWD 208
Query: 199 TNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQTMRTN 258
+ + L D I + + + L + G DN + ++D+R +P + V+ +
Sbjct: 209 LRKGEATMTLEGHQDTITGMSLSP-DGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGH 267
Query: 259 ---------SICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPT 309
W+P + + D + +D + + ++ H +V + F PT
Sbjct: 268 QHNFEKNLLKCSWSP-DGTKVTAGSSDRMVHIWDTTS-RRTIYKLPGHTGSVNECVFHPT 325
Query: 310 GDEVVTGSYDKTIRIYQV 327
+ + S DK I + ++
Sbjct: 326 EPIIGSCSSDKNIYLGEI 343
Score = 49.7 bits (117), Expect = 1e-05
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Query: 274 NEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSR 333
+ D + + + K V K H +A++D+ ++ G ++V+ S DKT+R + V+ G
Sbjct: 72 SHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQI 131
Query: 334 EIYHTKRMQHIFQVKYTMDSK----YIVSGSDDGNVRLW 368
+ K +H V ++ I+SGSDDG +LW
Sbjct: 132 K----KMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLW 166
>Hs9506645 [R] KOG0266 WD40 repeat-containing protein
Length = 330
Score = 62.4 bits (150), Expect = 1e-09
Identities = 39/157 (24%), Positives = 81/157 (50%), Gaps = 5/157 (3%)
Query: 215 INHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIV-QTMRTNSICWNPVEAFNFVIA 273
++ V+F+ N + LAS+ +D ++++ + + + + + W+ ++ V A
Sbjct: 44 VSSVKFSPNG-EWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSS-DSSRLVSA 101
Query: 274 NEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSR 333
++D +D+R+ K L K H + V +F+P + +++GS+D+T++I++VK G
Sbjct: 102 SDDKTLKLWDVRS-GKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEVKTGKCL 160
Query: 334 EIYHTKRMQHIFQVKYTMDSKYIVSGSDDGNVRLWRA 370
+ + + V + IVSGS DG R+W A
Sbjct: 161 KTL-SAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDA 196
Score = 53.9 bits (128), Expect = 5e-07
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 20/168 (11%)
Query: 205 ISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQTMRTNS---IC 261
IS+++W +D+ L S D ++ L+D+R+ K ++T++ +S C
Sbjct: 86 ISDVAWSSDSSR-----------LVSASDDKTLKLWDVRSG----KCLKTLKGHSNYVFC 130
Query: 262 WNPVEAFNFVIANE-DHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYDK 320
N N +I+ D ++++ K L H V V F+ +G +V+GSYD
Sbjct: 131 CNFNPPSNLIISGSFDETVKIWEVKT-GKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDG 189
Query: 321 TIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSKYIVSGSDDGNVRLW 368
RI+ G + + VK++ + KYI++ + D ++LW
Sbjct: 190 LCRIWDAASGQCLKTLVDDDNPPVSFVKFSPNGKYILTATLDNTLKLW 237
Score = 53.9 bits (128), Expect = 5e-07
Identities = 45/190 (23%), Positives = 85/190 (44%), Gaps = 17/190 (8%)
Query: 194 IELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQ 253
++LWD K + L ++ + FN +++ S D +V +++++T K ++
Sbjct: 107 LKLWDVRSGKCLKTLKGHSNYVFCCNFNPPS-NLIISGSFDETVKIWEVKTG----KCLK 161
Query: 254 TMRTNSICWNPVEAFNF-------VIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDF 306
T+ +S +PV A +F V + D +D + + D V V F
Sbjct: 162 TLSAHS---DPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNPPVSFVKF 218
Query: 307 SPTGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQH--IFQVKYTMDSKYIVSGSDDGN 364
SP G ++T + D T++++ G + Y ++ + IF K+IVSGS+D
Sbjct: 219 SPNGKYILTATLDNTLKLWDYSRGRCLKTYTGQKNEKYCIFANFSVTGGKWIVSGSEDNL 278
Query: 365 VRLWRAKAWE 374
V +W + E
Sbjct: 279 VYIWNLQTKE 288
>CE27713 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 331
Score = 62.4 bits (150), Expect = 1e-09
Identities = 52/253 (20%), Positives = 106/253 (41%), Gaps = 24/253 (9%)
Query: 129 NFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFV 188
+F+ S G D+ + LW+V F ++ L +G A + + S+ V
Sbjct: 49 SFLASAGYDQQIFLWNV----FGECENFAVLKGHKG---------AIMEVKFNADSSHLV 95
Query: 189 TGGAQ--IELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNS 246
+ G + +WD I N D +N V N+ ++ S D +V+++D+R+
Sbjct: 96 SAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVNRRGPQMICSASDDGTVMVHDMRSKE 155
Query: 247 PTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDF 306
+K + + ++ +N A N + D+ +DM + +V H + +
Sbjct: 156 AAKKFICKYQQTAVTFNDA-ADNVICGGIDNQIKVWDMLR-NDVRYVLSGHRDTITSLSV 213
Query: 307 SPTGDEVVTGSYDKTIRIYQVKH--GHSREIYHTKRMQHIFQVK-----YTMDSKYIVSG 359
S G+ +++ S D ++ + ++ R + + H F+ ++ YI +G
Sbjct: 214 SHNGNFLLSNSMDCSLMSWDIRPFVPAQRLVARYQGASHNFEKNLLKCGWSPRDNYITAG 273
Query: 360 SDDGNVRLWRAKA 372
S D V +W AK+
Sbjct: 274 SADRFVYVWNAKS 286
Score = 55.5 bits (132), Expect = 2e-07
Identities = 60/269 (22%), Positives = 110/269 (40%), Gaps = 35/269 (13%)
Query: 65 GHRDGVYTIAKNYNVLNKLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLS 124
GH+ + + N + + L +A D ++ W+M T + +FK+H +V + V +
Sbjct: 77 GHKGAIMEVKFNADS-SHLVSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDV--NRRG 133
Query: 125 PQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQK 184
PQ + S DD TV + + S + + K F ++ ++ +
Sbjct: 134 PQ---MICSASDDGTVMVHDMRSKEAA---------------KKFICKYQQTAVTFNDAA 175
Query: 185 SNFVTGGA--QIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDL 242
N + GG QI++WD R+ LS D I + + N + L S D S++ +D+
Sbjct: 176 DNVICGGIDNQIKVWDMLRNDVRYVLSGHRDTITSLSVSHNG-NFLLSNSMDCSLMSWDI 234
Query: 243 RTNSPTQKIVQTMRTNS---------ICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHV 293
R P Q++V + S W+P + N++ A Y ++
Sbjct: 235 RPFVPAQRLVARYQGASHNFEKNLLKCGWSPRD--NYITAGSADRFVYVWNAKSRACVYK 292
Query: 294 FKDHVSAVMDVDFSPTGDEVVTGSYDKTI 322
H+ +V PT +++ DKTI
Sbjct: 293 LPGHLGSVNCTALHPTQQILLSAGSDKTI 321
>CE11860 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 412
Score = 62.0 bits (149), Expect = 2e-09
Identities = 61/249 (24%), Positives = 98/249 (38%), Gaps = 31/249 (12%)
Query: 166 IKTFHGEHAFQSLDHHRQKSNFVTGG--AQIELWDTNRSK-------PISNLSWGADNIN 216
+K GE S + R+ + +T G I WD N ++ P S + N
Sbjct: 167 LKGHEGEGYGMSWSNTRE-GHLLTAGDDGMICHWDINANQTISGQIVPQSKFKGHSSNAE 225
Query: 217 HVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIV-QTMRTNSICWNPVEAFNFVIANE 275
V F+ + S G D + L+DLR + P V T N I +NP + +
Sbjct: 226 DVSFHALHNFVFGSVGDDRKLNLWDLRQSKPQLTAVGHTAEVNCITFNPFSEYILATGSV 285
Query: 276 DHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVV--TGSYDKTI--RIYQVKHGH 331
D +DMRNM K ++ K H + V FSP + V+ +GS D+ I I +++
Sbjct: 286 DKTVALWDMRNMRKKMYTLKHHNDEIFQVSFSPHYETVLASSGSDDRVIVWDISKIQDPS 345
Query: 332 SRE------------IYHTKRMQHIFQVKYTMDSKYIVSGSDDGNVRLWRAKAWERSNAK 379
S H + + + + + SD+ N + WE SN+
Sbjct: 346 SSSAASSDSVPPEVIFIHAGHTGKVADFSWNPNRPWTICSSDEFNA----LQVWEVSNSL 401
Query: 380 STREKNKLE 388
+ EK + E
Sbjct: 402 VSSEKWETE 410
>At1g10580 [S] KOG0282 mRNA splicing factor
Length = 616
Score = 62.0 bits (149), Expect = 2e-09
Identities = 57/258 (22%), Positives = 110/258 (42%), Gaps = 26/258 (10%)
Query: 125 PQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGE-HAFQSLDHHRQ 183
P++ + +LS G D VK+W V + ++T+ G A + +
Sbjct: 292 PKQGHLLLSAGMDCKVKIWDVYNSG--------------KCMRTYMGHAKAVRDICFSND 337
Query: 184 KSNFVTGG--AQIELWDTNRSKPISNLSWGA-DNINHVRFNQNEVDILASTGSDNSVVLY 240
S F+T G I+ WDT + IS S G + + + ++ +IL + SD +V +
Sbjct: 338 GSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQW 397
Query: 241 DLRTNSPTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSA 300
D+ T TQ+ Q + + FV +++D + ++ ++ + H+ +
Sbjct: 398 DINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHS 457
Query: 301 VMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQ-HIF-----QVKYTMDSK 354
+ + P G+ + S D I IY + ++ KR HI QV ++ D +
Sbjct: 458 MPSISVHPNGNWLAAQSLDNQILIYSTRERF--QLNKKKRFAGHIVAGYACQVNFSPDGR 515
Query: 355 YIVSGSDDGNVRLWRAKA 372
+++SG +G W K+
Sbjct: 516 FVMSGDGEGKCWFWDWKS 533
>YCR072c [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 515
Score = 61.6 bits (148), Expect = 2e-09
Identities = 68/299 (22%), Positives = 129/299 (42%), Gaps = 47/299 (15%)
Query: 82 KLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVK 141
+LA++S DG IK W+ +R + H V+ CV + + S D+TV+
Sbjct: 250 RLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVS--CVKWG-----GQGLLYSGSHDRTVR 302
Query: 142 LWSVNSDDFSNVKDDTRLNTDEGIIKTFHG--EHAFQSLDHHRQKSNFVTGGAQIELWDT 199
+W +NS I+K+ H S D+ + F G + +
Sbjct: 303 VWDINSQ-----------GRCINILKSHAHWVNHLSLSTDYALRIGAFDHTGKKPSTPEE 351
Query: 200 NRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYD-LRTNSPTQKIVQTMR-T 257
+ K + N + N N +++ + D ++ L++ L++ P ++ +
Sbjct: 352 AQKKALENYE------KICKKNGNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLV 405
Query: 258 NSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGS 317
N + ++P + V A+ D++ +D R+ K + F+ HV++V V +S +V+ S
Sbjct: 406 NHVAFSPDGRY-IVSASFDNSIKLWDGRD-GKFISTFRGHVASVYQVAWSSDCRLLVSCS 463
Query: 318 YDKTIRIYQVKH--------GHSREIYHTKRMQHIFQVKYTMDSKYIVSGSDDGNVRLW 368
D T++++ V+ GH E+Y V +++D K + SG D VRLW
Sbjct: 464 KDTTLKVWDVRTRKLSVDLPGHKDEVY---------TVDWSVDGKRVCSGGKDKMVRLW 513
Score = 61.2 bits (147), Expect = 3e-09
Identities = 66/293 (22%), Positives = 120/293 (40%), Gaps = 29/293 (9%)
Query: 83 LATASGDGVIKYWNMSTREELS-SFKAHYGMVTGLCVTPSYL-SPQRENFMLSCGDDKTV 140
+AT S D I+ W+ + + L + + H +T L P +L P + + S D T+
Sbjct: 201 IATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTI 260
Query: 141 KLWSVNSDDFSNVKDDTRL-NTDEGIIKTFHGEHAFQSLDHHRQKSNFVTGGAQIELWDT 199
K+W D S V T +T+ + G+ S H R + +WD
Sbjct: 261 KIW----DTVSRVCQYTMSGHTNSVSCVKWGGQGLLYSGSHDRT----------VRVWDI 306
Query: 200 N-RSKPISNLSWGADNINHVRFNQN---EVDILASTGSDNSVVLYDLRTNSPTQKIVQTM 255
N + + I+ L A +NH+ + + + TG S T QK
Sbjct: 307 NSQGRCINILKSHAHWVNHLSLSTDYALRIGAFDHTGKKPS-------TPEEAQKKALEN 359
Query: 256 RTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVT 315
N V A++D+ + ++ +K + H V V FSP G +V+
Sbjct: 360 YEKICKKNGNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVS 419
Query: 316 GSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSKYIVSGSDDGNVRLW 368
S+D +I+++ + G + + ++QV ++ D + +VS S D +++W
Sbjct: 420 ASFDNSIKLWDGRDGKFISTFR-GHVASVYQVAWSSDCRLLVSCSKDTTLKVW 471
>At5g50230 [R] KOG0288 WD40 repeat protein TipD
Length = 515
Score = 61.2 bits (147), Expect = 3e-09
Identities = 53/243 (21%), Positives = 97/243 (39%), Gaps = 29/243 (11%)
Query: 135 GDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAF---QSLDHHRQKSNFVTGG 191
G D+ VK+W NS +IK+ +G ++ H + T
Sbjct: 250 GQDRAVKMWDTNSGT---------------LIKSLYGSLGNILDMAVTHDNKSVIAATSS 294
Query: 192 AQIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKI 251
+ +WD + + L+ D + V ++ + S D ++ L+DL T +
Sbjct: 295 NNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTV 354
Query: 252 VQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGD 311
+ T N+IC + ++ + D N +D++ K L H SAV V S G+
Sbjct: 355 LFTSNCNAICLS-IDGLTVFSGHMDGNLRLWDIQT-GKLLSEVAGHSSAVTSVSLSRNGN 412
Query: 312 EVVTGSYDKTIRIYQVKHGHSREIYHTKR------MQHIFQVKYTMDSKYIVSGSDDGNV 365
++T D ++ + + EI T R + + + D Y+ +GS DG+V
Sbjct: 413 RILTSGRDNVHNVFDTR---TLEICGTLRASGNRLASNWSRSCISPDDDYVAAGSADGSV 469
Query: 366 RLW 368
+W
Sbjct: 470 HVW 472
>At5g67320 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 613
Score = 60.8 bits (146), Expect = 4e-09
Identities = 65/295 (22%), Positives = 124/295 (42%), Gaps = 39/295 (13%)
Query: 83 LATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVKL 142
LAT S DG + W ++ E +S+ H G + L ++ +++L+ D+T +
Sbjct: 339 LATGSCDGQARIWTLNG-ELISTLSKHKGPIFSLKWN------KKGDYLLTGSVDRTAVV 391
Query: 143 WSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLD-HHRQKSNFVTGG--AQIELWDT 199
W V ++++ K H+ +LD R +F T + I L
Sbjct: 392 WDVKAEEW----------------KQQFEFHSGPTLDVDWRNNVSFATSSTDSMIYLCKI 435
Query: 200 NRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQ-TMRTN 258
++P + +N V+++ +LAS D++ +++++ ++ + + T
Sbjct: 436 GETRPAKTFTGHQGEVNCVKWDPTG-SLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIY 494
Query: 259 SICW--------NPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTG 310
+I W NP + A+ D +D + K L F H V + FSP G
Sbjct: 495 TIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAE-LGKMLCSFNGHREPVYSLAFSPNG 553
Query: 311 DEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSKYIVSGSDDGNV 365
+ + +GS DK+I I+ +K G + Y IF+V + + I + D +V
Sbjct: 554 EYIASGSLDKSIHIWSIKEGKIVKTYTGN--GGIFEVCWNKEGNKIAACFADNSV 606
>At5g64730 [S] KOG0316 Conserved WD40 repeat-containing protein
Length = 343
Score = 60.5 bits (145), Expect = 5e-09
Identities = 60/251 (23%), Positives = 102/251 (39%), Gaps = 37/251 (14%)
Query: 129 NFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSN-- 186
N+ L+CG D+T++LW N GI+ + H + D H N
Sbjct: 31 NYALTCGKDRTIRLW----------------NPHRGILIKTYKSHGREVRDVHVTSDNAK 74
Query: 187 --FVTGGAQIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRT 244
G Q+ WD + + I +N V+FN + ++ S G D S+ ++D R+
Sbjct: 75 FCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSS-SVVVSAGFDRSLRVWDCRS 133
Query: 245 NS--PTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDM---RNMSKALHVFKDHVS 299
+S P Q I+ T +++ + + + D +DM R MS L
Sbjct: 134 HSVEPVQ-IIDTF-LDTVMSVVLTKTEIIGGSVDGTVRTFDMRIGREMSDNLG------Q 185
Query: 300 AVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVK--YTMDSKYIV 357
V + S G+ V+ G D T+R+ G ++Y + F+ T +++
Sbjct: 186 PVNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVY-KGHISKSFKTDCCLTNSDAHVI 244
Query: 358 SGSDDGNVRLW 368
GS+DG V W
Sbjct: 245 GGSEDGLVFFW 255
>Hs19913371 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 514
Score = 60.1 bits (144), Expect = 7e-09
Identities = 68/321 (21%), Positives = 124/321 (38%), Gaps = 29/321 (9%)
Query: 65 GHRDGVYTIAKNYNVLNKLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLS 124
GH V+ A N V + LA+ SGD + WN+S S + +V C+
Sbjct: 167 GHESEVFICAWN-PVSDLLASGSGDSTARIWNLSENSTSGSTQ----LVLRHCIREGGQD 221
Query: 125 PQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLD-HHRQ 183
+ S + L + S D R+ T +G + + G+H +
Sbjct: 222 VPSNKDVTSLDWNSEGTLLATGSYD-----GFARIWTKDGNLASTLGQHKGPIFALKWNK 276
Query: 184 KSNFVTGGAQIE---LWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLY 240
K NF+ + +WD + + + + V + N AS +D + +
Sbjct: 277 KGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNT--FASCSTDMCIHVC 334
Query: 241 DLRTNSPTQKIV-QTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVS 299
L + P + T N+I W+P ++D + M+ +H + H
Sbjct: 335 KLGQDRPIKTFQGHTNEVNAIKWDPTGNL-LASCSDDMTLKIWSMKQ-DNCVHDLQAHNK 392
Query: 300 AVMDVDFSPTGDE---------VVTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVKYT 350
+ + +SPTG + + S+D T+R++ V G TK + ++ V ++
Sbjct: 393 EIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTL-TKHQEPVYSVAFS 451
Query: 351 MDSKYIVSGSDDGNVRLWRAK 371
D +Y+ SGS D V +W +
Sbjct: 452 PDGRYLASGSFDKCVHIWNTQ 472
Score = 56.6 bits (135), Expect = 8e-08
Identities = 64/296 (21%), Positives = 120/296 (39%), Gaps = 41/296 (13%)
Query: 83 LATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVKL 142
LAT S DG + W S+ H G + L ++ NF+LS G DKT +
Sbjct: 240 LATGSYDGFARIWTKDGNLA-STLGQHKGPIFALKWN------KKGNFILSAGVDKTTII 292
Query: 143 WSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFVTGGAQ---IELWDT 199
W ++ G K H+ +LD Q +N + I +
Sbjct: 293 WDAHT----------------GEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKL 336
Query: 200 NRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKI-VQTMRTN 258
+ +PI + +N ++++ ++LAS D ++ ++ ++ ++ +
Sbjct: 337 GQDRPIKTFQGHTNEVNAIKWDPTG-NLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIY 395
Query: 259 SICWNPVEA------FNFVIANE--DHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTG 310
+I W+P N ++A+ D +D+ + +H H V V FSP G
Sbjct: 396 TIKWSPTGPGTNNPNANLMLASASFDSTVRLWDV-DRGICIHTLTKHQEPVYSVAFSPDG 454
Query: 311 DEVVTGSYDKTIRIYQVKHGHSREIYHTKR-MQHIFQVKYTMDSKYIVSGSDDGNV 365
+ +GS+DK + I+ + G + H+ R IF+V + + + + DG+V
Sbjct: 455 RYLASGSFDKCVHIWNTQTG---ALVHSYRGTGGIFEVCWNAAGDKVGASASDGSV 507
>At5g23430 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 922
Score = 60.1 bits (144), Expect = 7e-09
Identities = 51/194 (26%), Positives = 94/194 (48%), Gaps = 15/194 (7%)
Query: 188 VTGGA--QIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTN 245
VTGG ++ LW + I +L + I+ V F+ +EV ++A+ + ++ L+DL
Sbjct: 33 VTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEV-LVAAGAASGTIKLWDLEE- 90
Query: 246 SPTQKIVQTM---RTN--SICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSA 300
KIV+T+ R+N S+ ++P F F + D N +D+R +H +K H
Sbjct: 91 ---AKIVRTLTGHRSNCISVDFHPFGEF-FASGSLDTNLKIWDIRKKG-CIHTYKGHTRG 145
Query: 301 VMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSKYIVSGS 360
V + F+P G VV+G D ++++ + G + + Q I + + + +GS
Sbjct: 146 VNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQ-IQSLDFHPHEFLLATGS 204
Query: 361 DDGNVRLWRAKAWE 374
D V+ W + +E
Sbjct: 205 ADRTVKFWDLETFE 218
>At4g35050 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 424
Score = 60.1 bits (144), Expect = 7e-09
Identities = 44/213 (20%), Positives = 88/213 (40%), Gaps = 27/213 (12%)
Query: 184 KSNFVTGGAQ---IELWDTNRS------KPISNLSWGADNINHVRFNQNEVDILASTGSD 234
K ++ G+Q I LWD + + P+ I V ++ +I S G D
Sbjct: 181 KEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDD 240
Query: 235 NSVVLYDLRTNSPTQKI-VQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHV 293
+V++DLRTN ++ V N + +NP + A+ D +D+R ++ LHV
Sbjct: 241 CQLVIWDLRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHV 300
Query: 294 FKDHVSAVMDVDFSPTGDEVVTGS-YDKTIRIYQVKHGHSREI---------------YH 337
H V V++ P + V+ S D+ + ++ + ++ H
Sbjct: 301 LSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSH 360
Query: 338 TKRMQHIFQVKYTMDSKYIVSG-SDDGNVRLWR 369
I + D +++S ++D ++++W+
Sbjct: 361 GGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQ 393
>At1g15470 [I] KOG0278 Serine/threonine kinase receptor-associated protein
Length = 333
Score = 60.1 bits (144), Expect = 7e-09
Identities = 60/263 (22%), Positives = 109/263 (40%), Gaps = 22/263 (8%)
Query: 65 GHRDGVYTIAKNYNVLNKLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLS 124
GH+ V++ + + N + + A+AS D K WN T +EL SF+ H +V +
Sbjct: 54 GHKGAVWSCSLDKNAI-RAASASADFTAKIWNALTGDELHSFE-HKHIVRACAFS----- 106
Query: 125 PQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQK 184
+ + +L+ G +K ++++ +N D + G I+T H+ ++
Sbjct: 107 -EDTHRLLTGGMEKILRIFDLNRPD----APPKEVGNSPGSIRTVEWLHSDNTI------ 155
Query: 185 SNFVTGGAQIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRT 244
+ T I LWD K + L + + +Q+ I + GS SV +D +
Sbjct: 156 LSSCTDTGDIRLWDIRSDKIVHTLETKSP-VTSAEVSQDGRYITTADGS--SVKFWDAKN 212
Query: 245 NSPTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDV 304
+ S P F+ ED + +D + + + K H V V
Sbjct: 213 FGLLKSYDMPCNVESASLEPKHGNTFIAGGEDMWVHRFDFQT-GEEIGCNKGHHGPVHCV 271
Query: 305 DFSPTGDEVVTGSYDKTIRIYQV 327
++P G+ +GS D T+RI+ V
Sbjct: 272 RYAPGGESYTSGSEDGTVRIWVV 294
>Hs15150805 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 522
Score = 59.7 bits (143), Expect = 9e-09
Identities = 69/324 (21%), Positives = 128/324 (39%), Gaps = 33/324 (10%)
Query: 65 GHRDGVYTIAKNYNVLNKLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLS 124
GH V+ A N V + LA+ SGD + WN++ S + +V C+
Sbjct: 177 GHESEVFICAWN-PVSDLLASGSGDSTARIWNLNENSNGGSTQ----LVLRHCIREGGHD 231
Query: 125 PQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLD-HHRQ 183
+ S + L ++ S D R+ T+ G + + G+H +
Sbjct: 232 VPSNKDVTSLDWNSDGTLLAMGSYD-----GFARIWTENGNLASTLGQHKGPIFALKWNK 286
Query: 184 KSNFVTGGAQIE---LWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLY 240
K N+V + +WD + + + + V + N AS +D + +
Sbjct: 287 KGNYVLSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMT--FASCSTDMCIHVC 344
Query: 241 DLRTNSPTQKIV-QTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVS 299
L + P + T N+I W+P ++D + M+ +H + H
Sbjct: 345 RLGCDHPVKTFQGHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSMKQ-DACVHDLQAHSK 402
Query: 300 AVMDVDFSPTGDE---------VVTGSYDKTIRIYQVKHGHSREIYHT--KRMQHIFQVK 348
+ + +SPTG + + S+D T+R++ V+ G HT K + ++ V
Sbjct: 403 EIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCT---HTLMKHQEPVYSVA 459
Query: 349 YTMDSKYIVSGSDDGNVRLWRAKA 372
++ D KY+ SGS D V +W ++
Sbjct: 460 FSPDGKYLASGSFDKYVHIWNTQS 483
>7296209 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 700
Score = 59.7 bits (143), Expect = 9e-09
Identities = 68/320 (21%), Positives = 130/320 (40%), Gaps = 34/320 (10%)
Query: 65 GHRDGVYTIAKNYNVLNKLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLS 124
GH V+ A N + + LA+ SGD + W+MS S+ +V C+
Sbjct: 353 GHESEVFICAWNPS-RDLLASGSGDSTARIWDMSDANTNSN-----QLVLRHCI------ 400
Query: 125 PQRENFMLSCGDDKTVKLWSVNSDDFSNVKDD--TRLNTDEGIIKTFHGEHA--FQSLDH 180
Q+ + D T W+ + + D R+ +G + + G+H +L
Sbjct: 401 -QKGGAEVPSNKDVTSLDWNCDGSLLATGSYDGYARIWKTDGRLASTLGQHKGPIFALKW 459
Query: 181 HRQKSNFVTGGAQIE--LWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVV 238
++ + ++ G +WD + + ++ + V + N+ AS +D +
Sbjct: 460 NKCGNYILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTNQA--FASCSTDQRIH 517
Query: 239 LYDLRTNSPTQKIV-QTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDH 297
+ L N P + T N+I W P + ++D + M N + H + H
Sbjct: 518 VCRLGVNEPIKTFKGHTNEVNAIKWCP-QGQLLASCSDDMTLKIWSM-NRDRCCHDLQAH 575
Query: 298 VSAVMDVDFSPTGDE---------VVTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVK 348
+ + +SPTG + + S+D T+R++ V+ G TK + ++ V
Sbjct: 576 SKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDVERGSCIHTL-TKHTEPVYSVA 634
Query: 349 YTMDSKYIVSGSDDGNVRLW 368
++ D K++ SGS D V +W
Sbjct: 635 FSPDGKHLASGSFDKCVHIW 654
Score = 55.5 bits (132), Expect = 2e-07
Identities = 63/292 (21%), Positives = 111/292 (37%), Gaps = 33/292 (11%)
Query: 83 LATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVKL 142
LAT S DG + W R S+ H G + L N++LS G DKT +
Sbjct: 425 LATGSYDGYARIWKTDGRLA-STLGQHKGPIFALKWNKC------GNYILSAGVDKTTII 477
Query: 143 WSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFVTGGAQIELWDTNRS 202
W ++ + FH A Q + +I + +
Sbjct: 478 WDASTGQCTQQF-------------AFHSAPALDVDWQTNQAFASCSTDQRIHVCRLGVN 524
Query: 203 KPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLY---------DLRTNSPTQKIVQ 253
+PI + +N +++ + +LAS D ++ ++ DL+ +S ++
Sbjct: 525 EPIKTFKGHTNEVNAIKWCP-QGQLLASCSDDMTLKIWSMNRDRCCHDLQAHSKEIYTIK 583
Query: 254 TMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEV 313
T NP A+ D +D+ S +H H V V FSP G +
Sbjct: 584 WSPTGPGTNNPNTNLILASASFDSTVRLWDVERGS-CIHTLTKHTEPVYSVAFSPDGKHL 642
Query: 314 VTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSKYIVSGSDDGNV 365
+GS+DK + I+ + G + ++ K IF+V + + + + DG+V
Sbjct: 643 ASGSFDKCVHIWSTQTG--QLVHSYKGTGGIFEVCWNSKGTKVGASASDGSV 692
>7293188 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 296
Score = 59.7 bits (143), Expect = 9e-09
Identities = 37/142 (26%), Positives = 68/142 (47%), Gaps = 1/142 (0%)
Query: 227 ILASTGSDNSVVLYDLRTNSPTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRN 286
+L + G D +V L+ + N + R+ C NFV + +D N
Sbjct: 32 VLVTGGEDRNVNLWAIGQNECFMSLTGHNRSID-CVRFAYKDNFVYSADDIGIIRRWDLN 90
Query: 287 MSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQ 346
K H+ +V +DF+P+G+ VV+GS D T+R++ V++ ++ M H+
Sbjct: 91 SQKIYSTLNGHMKSVRTLDFNPSGEYVVSGSNDTTVRLWDVQNENNCIKVCRGHMSHVNS 150
Query: 347 VKYTMDSKYIVSGSDDGNVRLW 368
VK++ D +I S +G++ +W
Sbjct: 151 VKFSPDGLWIASAGLEGSILIW 172
>7290331 [R] KOG0266 WD40 repeat-containing protein
Length = 361
Score = 59.7 bits (143), Expect = 9e-09
Identities = 61/263 (23%), Positives = 106/263 (40%), Gaps = 36/263 (13%)
Query: 124 SPQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQ 183
SP E ++ S DK +K+W F KT G S
Sbjct: 81 SPNGE-WLASSSADKLIKIWGAYDGKFE---------------KTISGHKLGISDVAWSS 124
Query: 184 KSNFVTGGAQ---IELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLY 240
S + G+ +++W+ + K + L ++ + FN +++ S D SV ++
Sbjct: 125 DSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIW 183
Query: 241 DLRTNSPTQKIVQTMRTNSICWNPVEAFNF-------VIANEDHNAYYYDMRNMSKALHV 293
D+RT K ++T+ +S +PV A +F V ++ D +D + +
Sbjct: 184 DVRTG----KCLKTLPAHS---DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 236
Query: 294 FKDHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIY--HTKRMQHIFQVKYTM 351
D V V FSP G ++ + D T++++ G + Y H IF
Sbjct: 237 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT 296
Query: 352 DSKYIVSGSDDGNVRLWRAKAWE 374
K+IVSGS+D V +W ++ E
Sbjct: 297 GGKWIVSGSEDNMVYIWNLQSKE 319
>At5g52820 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 473
Score = 59.3 bits (142), Expect = 1e-08
Identities = 71/314 (22%), Positives = 127/314 (39%), Gaps = 37/314 (11%)
Query: 65 GHRDGVYTIAKNYNVLNKLATASGDGVIKYWNMSTRE-ELSSFKAHYGMVTGLCVTPSYL 123
GH++ V T+A + + + L + S G I WN E E S H +TG+ P +L
Sbjct: 149 GHKNWVLTVAWSPDGKH-LVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHL 207
Query: 124 SPQRENFMLSCGDDKTVKLWSVN-SDDFSNVKDDTRLNT-----DEGIIKTFHGEHAFQS 177
S F+ S D ++W + + T T +GII T +
Sbjct: 208 SSPCRRFVTS-SKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDGIIYTGSQD----- 261
Query: 178 LDHHRQKSNFVTGGAQIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSV 237
I++W+T + K I L IN + + V L + D++
Sbjct: 262 --------------CTIKMWETTQGKLIRELKGHGHWINSLALSTEYV--LRTGAFDHTG 305
Query: 238 VLYDLRTNSPTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDH 297
Y N QK ++ R N + E V ++D + ++ + H
Sbjct: 306 RQYP--PNEEKQKALE--RYNKTKGDSPE--RLVSGSDDFTMFLWEPSVSKQPKKRLTGH 359
Query: 298 VSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSKYIV 357
V V FSP G + + S+DK++R++ G ++ + ++QV ++ DS+ ++
Sbjct: 360 QQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRG-HVGPVYQVSWSADSRLLL 418
Query: 358 SGSDDGNVRLWRAK 371
SGS D +++W +
Sbjct: 419 SGSKDSTLKIWEIR 432
Score = 49.7 bits (117), Expect = 1e-05
Identities = 28/104 (26%), Positives = 52/104 (49%), Gaps = 3/104 (2%)
Query: 282 YDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRM 341
+ +R +++ H AV+ V FSP G ++ +GS D T+R++ + ++ K
Sbjct: 93 FRIRPVNRCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLY--TETPLFTCKGH 150
Query: 342 QH-IFQVKYTMDSKYIVSGSDDGNVRLWRAKAWERSNAKSTREK 384
++ + V ++ D K++VSGS G + W K E + T K
Sbjct: 151 KNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHK 194
>At3g18140 [R] KOG0315 G-protein beta subunit-like protein (contains WD40
repeats)
Length = 305
Score = 59.3 bits (142), Expect = 1e-08
Identities = 66/304 (21%), Positives = 128/304 (41%), Gaps = 41/304 (13%)
Query: 83 LATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVKL 142
LATAS D I++W T + + V L +TP + L+ + ++L
Sbjct: 8 LATASYDHTIRFWEAETGRCYRTIQYPDSHVNRLEITP-------DKHYLAAACNPHIRL 60
Query: 143 WSVNSDDFSNVKD-DTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFVTGGAQ---IELWD 198
+ VNS+ V D+ N + FQ + ++ G++ +++WD
Sbjct: 61 FDVNSNSPQPVMTYDSHTNNVMAV--------GFQC------DAKWMYSGSEDGTVKIWD 106
Query: 199 TNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQ----T 254
R+ +N V + N+ ++++ + N + ++DLR NS + ++V
Sbjct: 107 L-RAPGCQKEYESVAAVNTVVLHPNQTELISGDQNGN-IRVWDLRANSCSCELVPEVDTA 164
Query: 255 MRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKA------LHVFKDHVSAVMDVDFSP 308
+R+ ++ W+ V AN Y + + + LH + H ++ SP
Sbjct: 165 VRSLTVMWDGTMV---VAANNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSP 221
Query: 309 TGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSKYIVSGSDDGNVRLW 368
+ T S DKT++I+ V G E T + ++ +++D +++V+ S D RLW
Sbjct: 222 ANKYLATASSDKTVKIWNV-DGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLW 280
Query: 369 RAKA 372
A
Sbjct: 281 SMPA 284
>At2g22040 [R] KOG0315 G-protein beta subunit-like protein (contains WD40
repeats)
Length = 312
Score = 58.2 bits (139), Expect = 3e-08
Identities = 64/300 (21%), Positives = 131/300 (43%), Gaps = 32/300 (10%)
Query: 83 LATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVKL 142
LATAS D I+ W T SF+ L V L+P++ + +C ++L
Sbjct: 13 LATASHDQTIRLWQARTGRCYFSFR-----YPDLHVNRLELTPEKGKLVAACNPH--IRL 65
Query: 143 WSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFVTGGAQIELWDTNRS 202
+ + S + ++ ++ + ++ FQ H + +++WD R
Sbjct: 66 FDLRSYN-PHIPVRNFVSHTKNVMAV-----GFQYTGHMMYSGS---EDGSVKIWDL-RV 115
Query: 203 KPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQTM----RTN 258
+ +N V + N+ ++++ + N + ++DLR + + ++V + R+
Sbjct: 116 RECQREFRSVSPVNTVVLHPNQTELISGDQNGN-IRVWDLRADLCSCELVPEVGTPIRSL 174
Query: 259 SICWNPVEAFNFVIANEDHNAYYY----DMRNMSK--ALHVFKDHVSAVMDVDFSPTGDE 312
++ W+ V AN+ Y + + + M++ LH + H S ++ SP
Sbjct: 175 TVMWDGTMV---VAANDRGTCYVWRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGNKY 231
Query: 313 VVTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSKYIVSGSDDGNVRLWRAKA 372
+ T S DKT++I+ + G E T + ++ ++MD +Y+V+ S D RLW +A
Sbjct: 232 LATASSDKTVKIWNLD-GFKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRA 290
>7303631 [S] KOG0308 Conserved WD40 repeat-containing protein
Length = 680
Score = 58.2 bits (139), Expect = 3e-08
Identities = 70/309 (22%), Positives = 126/309 (40%), Gaps = 70/309 (22%)
Query: 66 HRDGVYTIAKNYNVLNKLATASGDGVIKYWNM---STREELSSFKAHYGMVTGLCVTPSY 122
HR+GV + + N KL +A D +I+ WN S+ + + S + H V + + +
Sbjct: 27 HRNGVNALQLDANN-GKLYSAGRDAIIRVWNTRTDSSEKYIQSMEHHNDWVNDIVLCCNG 85
Query: 123 LSPQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHA--FQSLDH 180
+ ++S D TVK+W N +G + H Q+L +
Sbjct: 86 RN------LISASCDTTVKVW----------------NAQKGFCMSTLRTHRDYVQALAY 123
Query: 181 HRQKSNFVTGGAQ--IELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVV 238
+ + + G I LWD N + + + N V + TGS +S+
Sbjct: 124 AKDREQVASAGLDKAIFLWDVN-------------TLTALTASNNTVTTSSLTGSKDSI- 169
Query: 239 LYDLRTNSPTQKIVQTMRTNSIC--WNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKD 296
Y L N P+ ++ + T +I W+P MR M +
Sbjct: 170 -YSLAMN-PSGTVIVSGSTENILRIWDPRTC----------------MRRMK-----LRG 206
Query: 297 HVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSKYI 356
H V + SP G++VV+GS D TI+++ + + H + + ++ + + + +YI
Sbjct: 207 HTENVRCLVVSPDGNQVVSGSSDGTIKVWNLGQQRCVQTIHVHK-EGVWSLLMSENFQYI 265
Query: 357 VSGSDDGNV 365
+SGS D N+
Sbjct: 266 ISGSRDRNI 274
>7302979 [S] KOG0295 WD40 repeat-containing protein
Length = 411
Score = 58.2 bits (139), Expect = 3e-08
Identities = 73/338 (21%), Positives = 130/338 (37%), Gaps = 63/338 (18%)
Query: 65 GHRDGVYTIAKNYNVLNKLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLS 124
GHR + + + + + +AS D I+ W+ T E S K H V +
Sbjct: 106 GHRASITRVIF-HPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDA---- 160
Query: 125 PQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQK 184
+ + SC D ++KLW DF + IKT HG DH+
Sbjct: 161 --QGKLLASCSADLSIKLW-----DFQQSYE---------CIKTMHGH------DHNVSS 198
Query: 185 SNFVTGG---------AQIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDN 235
FV G I++W+ + + + + VR + E I A+ +D
Sbjct: 199 VAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHI-EGSIFATCSNDQ 257
Query: 236 SVVLYDLRTNSPTQKIVQTMRTNS---ICWNPVEAFNFV--IANED-----HNAYYYDMR 285
++ ++ TNS K+ ++ I W P A + + A D H +
Sbjct: 258 TIRVW--LTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASG 315
Query: 286 NMSKALHVF-----------KDHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSRE 334
+ K + ++ H + V + F P G +V+ S DKTIR++ +++ +
Sbjct: 316 SRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMK 375
Query: 335 IYHTKRMQHI-FQVKYTMDSKYIVSGSDDGNVRLWRAK 371
+ QH + + Y++SGS D V++W +
Sbjct: 376 TLYAH--QHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
>SPAC4D7.03 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 703
Score = 57.8 bits (138), Expect = 4e-08
Identities = 64/270 (23%), Positives = 119/270 (43%), Gaps = 47/270 (17%)
Query: 23 QMPRNLNPALHPFERAREYTKALNATKLERMFAKPFVGQLGYGHRDGVYTIAKNYNVLNK 82
++P+N +P P N ++R P+ GH D V TI+ ++L
Sbjct: 473 KLPKNTDPPYLPD----------NTNSIDRWEKNPYFVHTLIGHTDSVRTISGYGDIL-- 520
Query: 83 LATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVKL 142
+ S D I+ W +ST E L + H L + P+R N +S DK++++
Sbjct: 521 -VSGSYDSSIRIWRVSTGECLYHLRGH-----SLRIYSVLYEPER-NICISGSMDKSIRV 573
Query: 143 WSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFVTGGAQ--IELWDTN 200
W +++ V + G AF +L + Q + ++G A I +WD N
Sbjct: 574 WDLSTGTCKYVLE---------------GHDAFVTLLNVFQ-NRLISGSADSTIRIWDLN 617
Query: 201 RSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQTMRTN-S 259
KP+ L + I+ +++++ +G+D SV L+D+RT K+++ + T+ +
Sbjct: 618 TGKPLMVLPSNSGYISSFVSDEHKI----ISGNDGSVKLWDVRTG----KLLRFLLTDLT 669
Query: 260 ICWN-PVEAFNFVIANEDHNAYYYDMRNMS 288
W+ +A V A + + Y ++ N S
Sbjct: 670 KIWHVDFDAMRCVAAVQRDDQAYLEVINFS 699
>Hs7019573 [D] KOG0642 Cell-cycle nuclear protein contains WD-40 repeats
Length = 753
Score = 57.8 bits (138), Expect = 4e-08
Identities = 58/286 (20%), Positives = 116/286 (40%), Gaps = 38/286 (13%)
Query: 66 HRDGVYTIAKNYNVLNKLATASGDGVIKYWNMSTR-----------EELSSFKAHYGMVT 114
H DG+ ++A +++ + L TAS DG +K WN+ E + +F+AH G V
Sbjct: 437 HYDGIRSLAFHHSQ-SALLTASEDGTLKLWNLQKAVTAKKNAALDVEPIHAFRAHRGPVL 495
Query: 115 GLCVTPSYLSPQRENFMLSCGDDKTVKLWSV---NSDDFSNVKDDTRLNTDEGIIKTFHG 171
+ + + + S G D + W + + D + + EG HG
Sbjct: 496 AVAMGSN------SEYCYSGGADACIHSWKIPDLSMDPYDGYDPSVLSHVLEG-----HG 544
Query: 172 EHAFQ-SLDHHRQKSNFVTGGAQIELWDTNRSKPISNLSWGADNIN----HVRFNQNEVD 226
+ + + Q+ + + +WD + S P ++ + + V F E
Sbjct: 545 DAVWGLAFSPTSQRLASCSADGTVRIWDPSSSSPACLCTFPTASEHGVPTSVAFTSTEPA 604
Query: 227 ILASTGSDNSVVLYDLRTNSPTQKIVQT-----MRTNSICWNPVEAFNFVIANEDHNAYY 281
+ ++ VLYD+ S + + N + +P + + A++D +
Sbjct: 605 HIVASFRSGDTVLYDMEVGSALLTLESRGSSGPTQINQVVSHPNQPLT-ITAHDDRGIRF 663
Query: 282 YDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQV 327
D R K +H H+ AV + P G +++GS+D ++R++ +
Sbjct: 664 LDNRT-GKPVHSMVAHLDAVTCLAVDPNGAFLMSGSHDCSLRLWSL 708
>CE16234 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 417
Score = 57.8 bits (138), Expect = 4e-08
Identities = 42/206 (20%), Positives = 83/206 (39%), Gaps = 49/206 (23%)
Query: 124 SPQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQ 183
+P +E +LS DD+TV W +N++ Q++ Q
Sbjct: 181 NPNKEGLILSASDDQTVCHWDINAN---------------------------QNVAGELQ 213
Query: 184 KSNFVTGGAQIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLR 243
+ G + + +++W HV + + S G D ++++D+R
Sbjct: 214 AKDVFKGHESV----------VEDVAW------HVLHD----GVFGSVGDDKKLLIWDVR 253
Query: 244 TNSPTQKI-VQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVM 302
T++P I + N + +NP F + D +D+RN+ LH F+ H +
Sbjct: 254 TSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMKLHSFESHRDEIF 313
Query: 303 DVDFSPTGDEVVTGS-YDKTIRIYQV 327
V +SP + ++ S DK + ++ +
Sbjct: 314 QVQWSPHNETILASSGTDKRLHVWDL 339
>Hs5902034 [S] KOG0270 WD40 repeat-containing protein
Length = 501
Score = 57.4 bits (137), Expect = 5e-08
Identities = 44/178 (24%), Positives = 82/178 (45%), Gaps = 7/178 (3%)
Query: 196 LWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQ-T 254
LWD + KP ++L+ D + ++F+ E L S D SV LYD R+ + ++ + +
Sbjct: 283 LWDMSLGKPAASLAVHTDKVQTLQFHPFEAQTLISGSYDKSVALYDCRSPDESHRMWRFS 342
Query: 255 MRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDF-SPTGDEV 313
+ + WN +F+ + +D Y D R+ K + H + +D S +
Sbjct: 343 GQIERVTWNHFSPCHFLASTDDGFVYNLDARS-DKPIFTLNAHNDEISGLDLSSQIKGCL 401
Query: 314 VTGSYDKTIRIYQVKHGHSREIYHTK--RMQHIFQVKYTMDSKYIVS-GSDDGNVRLW 368
VT S DK ++I+ + G + H++ +M +F D +I + G +R+W
Sbjct: 402 VTASADKYVKIWDIL-GDRPSLVHSRDMKMGVLFCSSCCPDLPFIYAFGGQKEGLRVW 458
>Hs4557741 [S] KOG0295 WD40 repeat-containing protein
Length = 410
Score = 57.4 bits (137), Expect = 5e-08
Identities = 66/330 (20%), Positives = 129/330 (39%), Gaps = 48/330 (14%)
Query: 65 GHRDGVYTIAKNYNVLNKLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLS 124
GHR V + + V + + +AS D IK W+ T + + K H V + S
Sbjct: 106 GHRSPVTRVIF-HPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS--- 161
Query: 125 PQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHG-EHAFQSLDHHRQ 183
+ SC D T+KLW DF + I+T HG +H S+
Sbjct: 162 ---GKLLASCSADMTIKLW-----DFQGFE----------CIRTMHGHDHNVSSVAIMPN 203
Query: 184 KSNFVTGGAQ--IELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYD 241
+ V+ I++W+ + + + + VR NQ+ ++AS +D +V ++
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT-LIASCSNDQTVRVWV 262
Query: 242 LRTNSPTQKIVQTMR-TNSICWNPVEAFN-------------------FVIANEDHNAYY 281
+ T ++ + I W P +++ + + D
Sbjct: 263 VATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKM 322
Query: 282 YDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRM 341
+D+ + L H + V V F G +++ + DKT+R++ K+ + +
Sbjct: 323 WDV-STGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHE- 380
Query: 342 QHIFQVKYTMDSKYIVSGSDDGNVRLWRAK 371
+ + + + Y+V+GS D V++W +
Sbjct: 381 HFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>7303687 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 704
Score = 57.4 bits (137), Expect = 5e-08
Identities = 60/246 (24%), Positives = 104/246 (41%), Gaps = 35/246 (14%)
Query: 128 ENFMLSCG-DDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSN 186
++ ML+CG D +V++WS+ +KD L + LD N
Sbjct: 388 DSTMLACGFGDSSVRIWSLTPAKLRTLKDADSL----------------RELDKESADIN 431
Query: 187 FVTGGAQIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNS 246
+ + D + +L + F E+++L S D+++ L+ L T S
Sbjct: 432 -------VRMLDDRSGEVTRSLMGHTGPVYRCAFAP-EMNLLLSCSEDSTIRLWSLLTWS 483
Query: 247 PTQKIVQTMRTNSI-CWN---PVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVM 302
V T R + W+ + FV + D A + + ++AL VF H+S V
Sbjct: 484 ----CVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLW-ATDSNQALRVFVGHLSDVD 538
Query: 303 DVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSKYIVSGSDD 362
V F P + V TGS D+T+R++ G S + T + + ++ +Y+ SGS D
Sbjct: 539 CVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLM-TGHKGSVSSLAFSACGRYLASGSVD 597
Query: 363 GNVRLW 368
N+ +W
Sbjct: 598 HNIIIW 603
>At3g16650 [A] KOG0285 Pleiotropic regulator 1
Length = 477
Score = 57.0 bits (136), Expect = 6e-08
Identities = 74/320 (23%), Positives = 128/320 (39%), Gaps = 46/320 (14%)
Query: 65 GHRDGVYTIAKNYNVLNK-LATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYL 123
GH V ++A ++ N+ T S D IK W+++T + H G V GL V+
Sbjct: 166 GHLGWVRSVA--FDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVS---- 219
Query: 124 SPQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGE-HAFQSLDHHR 182
R +M S GDDK VK W + + +I+++HG H L H
Sbjct: 220 --NRHTYMFSAGDDKQVKCWDLEQNK---------------VIRSYHGHLHGVYCLALHP 262
Query: 183 QKSNFVTGG--AQIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGS-DNSVVL 239
+TGG + +WD I L +D + + D TGS D+++
Sbjct: 263 TLDVVLTGGRDSVCRVWDIRTKMQIFVLPHDSDVFSVL---ARPTDPQVITGSHDSTIKF 319
Query: 240 YDLRTNSPTQKIVQTMRT-NSICWNPVEAFNFVIANEDHNAYYYDMRN--MSKALHVFKD 296
+DLR I +T ++ +P E +FV A+ D+ + + L + +D
Sbjct: 320 WDLRYGKSMATITNHKKTVRAMALHPKEN-DFVSASADNIKKFSLPKGEFCHNMLSLQRD 378
Query: 297 HVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYHT-------KRMQHIFQVKY 349
++AV + +VTG + + K GH+ + T + I+ Y
Sbjct: 379 IINAVAVNE----DGVMVTGGDKGGLWFWDWKSGHNFQRAETIVQPGSLESEAGIYAACY 434
Query: 350 TMDSKYIVSGSDDGNVRLWR 369
+V+ D +++W+
Sbjct: 435 DQTGSRLVTCEGDKTIKMWK 454
>At5g58230 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 424
Score = 56.6 bits (135), Expect = 8e-08
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 14/135 (10%)
Query: 192 AQIELWDTNRSKPISNLSWGADNI--------NHVRFNQNEVDILASTGSDNSVVLYDLR 243
AQI LWD N + N S A I V ++ + S G D ++++DLR
Sbjct: 201 AQICLWDINATP--KNKSLDAQQIFKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR 258
Query: 244 TNS---PTQKIV-QTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVS 299
+ S P Q +V +M N + +NP + + D +D+R +S ALH F H
Sbjct: 259 SPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKLSTALHTFDSHKE 318
Query: 300 AVMDVDFSPTGDEVV 314
V V ++P + ++
Sbjct: 319 EVFQVGWNPKNETIL 333
>At5g08390 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 823
Score = 56.6 bits (135), Expect = 8e-08
Identities = 49/197 (24%), Positives = 94/197 (46%), Gaps = 21/197 (10%)
Query: 188 VTGGA--QIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTN 245
VTGG ++ LW + I +L + I+ V F+ +E ++A+ + ++ L+DL
Sbjct: 126 VTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASE-GLVAAGAASGTIKLWDLEE- 183
Query: 246 SPTQKIVQTM---RTN--SICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSA 300
K+V+T+ R+N S+ ++P F F + D N +D+R +H +K H
Sbjct: 184 ---AKVVRTLTGHRSNCVSVNFHPFGEF-FASGSLDTNLKIWDIRKKG-CIHTYKGHTRG 238
Query: 301 VMDVDFSPTGDEVVTGSYDKTIRIYQVKHG---HSREIYHTKRMQHIFQVKYTMDSKYIV 357
V + F+P G +V+G D ++++ + G H + + K I + + +
Sbjct: 239 VNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGK----IQSLDFHPHEFLLA 294
Query: 358 SGSDDGNVRLWRAKAWE 374
+GS D V+ W + +E
Sbjct: 295 TGSADKTVKFWDLETFE 311
Score = 52.4 bits (124), Expect = 1e-06
Identities = 43/200 (21%), Positives = 79/200 (39%), Gaps = 18/200 (9%)
Query: 131 MLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFVTG 190
+++ G+D V LW++ + I+ + S+ + G
Sbjct: 125 LVTGGEDHKVNLWAIGKPN--------------AILSLYGHSSGIDSVTFDASEGLVAAG 170
Query: 191 GAQ--IELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPT 248
A I+LWD +K + L+ N V F+ + AS D ++ ++D+R
Sbjct: 171 AASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFG-EFFASGSLDTNLKIWDIRKKGCI 229
Query: 249 QKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSP 308
R ++ + V ED+ +D+ K LH FK H + +DF P
Sbjct: 230 HTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDL-TAGKLLHEFKSHEGKIQSLDFHP 288
Query: 309 TGDEVVTGSYDKTIRIYQVK 328
+ TGS DKT++ + ++
Sbjct: 289 HEFLLATGSADKTVKFWDLE 308
>7301821 [S] KOG0269 WD40 repeat-containing protein
Length = 776
Score = 56.6 bits (135), Expect = 8e-08
Identities = 47/213 (22%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 123 LSPQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHR 182
L+ ++N ++ +K++S+NS+ F+ + + + + A+ +LD +
Sbjct: 24 LALNKDNNQIALAGRSLLKVYSINSNGFT---ESCNMRGKNQNLSYSANDVAWSTLDSNL 80
Query: 183 QKSNFVTGGAQIELWDTN---RSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVL 239
+ G + +WD + R K + + + V F+ +E +IL S D ++
Sbjct: 81 LATAATNG--VVSVWDLSKFGRQKQLLVYNEHERTAHTVTFHSSEPNILISGSQDGTIKC 138
Query: 240 YDLRTNSPTQKIVQTMRTNS-----ICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVF 294
+D+R++ K + T NS + ++P F +E+ +DMR K + F
Sbjct: 139 FDIRSD----KSINTYFCNSESVRDVKFSPHTQNIFSAVSENGTVQLWDMRKWDKCMVQF 194
Query: 295 KDHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQV 327
H V D+ PT + + TGS DK I+++ +
Sbjct: 195 TAHYGPVYTCDWHPTRNWLATGSRDKQIKVWNM 227
>YNL006w [R] KOG0315 G-protein beta subunit-like protein (contains WD40
repeats)
Length = 303
Score = 56.2 bits (134), Expect = 1e-07
Identities = 58/295 (19%), Positives = 118/295 (39%), Gaps = 31/295 (10%)
Query: 83 LATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVKL 142
L +A D I++W T + + V L +T + +L+ + V+L
Sbjct: 5 LVSAGYDHTIRFWEALTGVCSRTIQHSDSQVNRLEIT-------NDKKLLATAGHQNVRL 57
Query: 143 WSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFVTGGAQ---IELWDT 199
+ + + T+ + +F G + +Q + ++ ++ I++WD
Sbjct: 58 YDIRT-------------TNPNPVASFEGHRGNVTSVSFQQDNRWMVTSSEDGTIKVWDV 104
Query: 200 NRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQTMRTNS 259
N A +N V + N+ +++ S D ++ ++DL N T ++ T+
Sbjct: 105 RSPSIPRNYKHNAP-VNEVVIHPNQGELI-SCDRDGNIRIWDLGENQCTHQLTPEDDTSL 162
Query: 260 ICWNPV-EAFNFVIANEDHNAYYYDMRNMSKALHV-----FKDHVSAVMDVDFSPTGDEV 313
+ + AN N Y ++M N + A H+ F+ H + + + S +
Sbjct: 163 QSLSMASDGSMLAAANTKGNCYVWEMPNHTDASHLKPVTKFRAHSTYITRILLSSDVKHL 222
Query: 314 VTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSKYIVSGSDDGNVRLW 368
T S D T R++ + E + ++ ++ DS Y+V+ S D VRLW
Sbjct: 223 ATCSADHTARVWSIDDDFKLETTLDGHQRWVWDCAFSADSAYLVTASSDHYVRLW 277
>Hs11128017 [D] KOG0642 Cell-cycle nuclear protein contains WD-40 repeats
Length = 713
Score = 56.2 bits (134), Expect = 1e-07
Identities = 71/334 (21%), Positives = 141/334 (41%), Gaps = 47/334 (14%)
Query: 66 HRDGVYTIAKNYNVLNKLATASGDGVIKYWNMSTR-----------EELSSFKAHYGMVT 114
H DGV +A + V L TAS D +K WN+ E + +F+AH G V
Sbjct: 395 HFDGVRALAF-HPVEPVLVTASEDHTLKLWNLQKTVPAKKSASLDVEPIYTFRAHIGPVL 453
Query: 115 GLCVTPSYLSPQRENFMLSCGDDKTVKLWSVNS---DDFSNVKDDTRLNTDEGIIKTFHG 171
L ++ + S G D T++ W++ S D + + + T G G
Sbjct: 454 SLAISSN------GEQCFSGGIDATIQWWNMPSPSVDPYDTYEPNVLAGTLVGHTDAVWG 507
Query: 172 EHAFQSLDHHRQKSNFVTGGAQ--IELWDTNRSKPISNLSWGADNINHVRFNQNEVDI-- 227
L + K+ ++ A + LW+ P ++ D + + + + +
Sbjct: 508 ------LAYSGIKNQLLSCSADGTVRLWNPQEKLPCI-CTYNGDKKHGIPTSVDFIGCDP 560
Query: 228 --LASTGSDNSVVLYDLRTNSP----TQKIVQTMRTNS----ICWNPVEAFNFVIANEDH 277
+ ++ + S V+YDL T+ + ++ +++N+ + +P + A+ED
Sbjct: 561 AHMVTSFNTGSAVIYDLETSQSLVILSSQVDSGLQSNNHINRVVSHPTLPVT-ITAHEDR 619
Query: 278 NAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQV--KHGHSREI 335
+ ++D + K +H H+ AV + P G +++GS+D +IR++ + K
Sbjct: 620 HIKFFDNKT-GKMIHSMVAHLDAVTSLAVDPNGIYLMSGSHDCSIRLWNLDSKTCVQEIT 678
Query: 336 YHTKRM-QHIFQVKYTMDSKYIVSGSDDGNVRLW 368
H K++ + I+ V + YI S D +++
Sbjct: 679 AHRKKLDESIYDVAFHSSKAYIASAGADALAKVF 712
>CE27149 [S] KOG0316 Conserved WD40 repeat-containing protein
Length = 305
Score = 56.2 bits (134), Expect = 1e-07
Identities = 58/282 (20%), Positives = 109/282 (38%), Gaps = 31/282 (10%)
Query: 129 NFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGE-HAFQSLDHHRQKSNF 187
N+ ++CG DKTVKLW+ ++KT+ G + S
Sbjct: 29 NYCVTCGSDKTVKLWN---------------PLKSSLLKTYSGTGNEVLDAASSSDNSQI 73
Query: 188 VTGGAQ--IELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTN 245
GGA ++D K + +N V FN+ E ++ S D ++ +D R+
Sbjct: 74 AAGGADRACTVFDVETGKQLRRWRTHGAQVNAVAFNE-ESSVVFSGSMDCTMQAFDCRSR 132
Query: 246 SPTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVD 305
S + T+ I V V + D N Y +R+ + + D V++ V
Sbjct: 133 SEKPIQIFNESTDGILSIDVNGHEIVAGSADGNYRVYSIRDGNMTVDYMGDSVNS---VS 189
Query: 306 FSPTGDEVVTGSYDKTIRIYQVKHGHSREIYH-TKRMQHIFQVKYTMDSKYIVSGSDDGN 364
F+P + ++ G +R+ G Y + ++ + +++ SGS+DG
Sbjct: 190 FTPDSNCLLAGVMGGIVRLIDKSSGKLLASYKGHQNTEYKLDCRVLQSIEHVASGSEDGF 249
Query: 365 VRLWRAKAWERSNAKSTREKNKLEYDEKLKERFKHMPEVRRI 406
V ++ + + +KLE+ K+ P+ R+
Sbjct: 250 VYVY--------SLLDSHIVSKLEHPSKVIHSLTAHPKKERL 283
>CE05372 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 496
Score = 56.2 bits (134), Expect = 1e-07
Identities = 44/185 (23%), Positives = 82/185 (43%), Gaps = 15/185 (8%)
Query: 196 LWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQTM 255
LW ++ PI L ++ V F+ N LA+ D++ +YDL T + + Q
Sbjct: 280 LWSLSQESPIGELEQHPQRVSKVAFHPNGHH-LATACFDSTWRMYDLTTKK--ELLYQEG 336
Query: 256 RTNSICWNPVEAFNFVIANEDHNAY--YYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEV 313
+ S+ V H+ Y +DMR + + H + V++ P G E+
Sbjct: 337 HSKSVADVAFHPDGSVALTGGHDCYGRVWDMRT-GRCIMFLDGHTKEIHSVEWMPNGYEM 395
Query: 314 VTGSYDKTIRIYQVKHGHSREIY----HTKRMQHIFQVKYTMDSKYIVSGSDDGNVRLWR 369
+TGS D +++++ ++ R Y HT + +V+ +Y+VS S D +++W
Sbjct: 396 ITGSSDNSMKVWDLR--MRRNTYTMPAHT---SVVTRVRADAAGQYLVSASFDCTLKMWS 450
Query: 370 AKAWE 374
W+
Sbjct: 451 TTGWQ 455
>SPAC26H5.03 [BL] KOG1009 Chromatin assembly complex 1 subunit B/CAC2 (contains
WD40 repeats)
Length = 512
Score = 55.8 bits (133), Expect = 1e-07
Identities = 56/254 (22%), Positives = 99/254 (38%), Gaps = 51/254 (20%)
Query: 70 VYTIAKNYNVLNKLATASGDGVIKYWNMSTREE------LSSFKAHYGMVTGLCVTPSYL 123
+Y++ N LNK AT GD I+ W + T E LS+ H V + P
Sbjct: 21 IYSVDFQKNSLNKFATCGGDSKIRIWQLITSESSTKVEYLSTLSRHTQAVNVVRFNP--- 77
Query: 124 SPQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQ 183
N + + GD+ T+ LW + + + DD + + K +
Sbjct: 78 ---EGNILATAGDEGTIMLWVPTNTPITTLADDAE---ELALAKEY-------------W 118
Query: 184 KSNFVTGGAQIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLR 243
K V E++D L W D+ + L + DNS+ LYD
Sbjct: 119 KVKIVCRSMGSEIYD---------LCWSVDS-----------NFLIAGAMDNSLRLYDAH 158
Query: 244 TNS-PTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHV-SAV 301
T TQK + +CW+P+ + V + D + Y+++ K F+ + S +
Sbjct: 159 TGQLLTQKFDHSHYVQGVCWDPLNQY-IVSESSDRSICLYEIQEEKKNPKKFQLVLKSRI 217
Query: 302 MDVDFSPTGDEVVT 315
++++ T E+++
Sbjct: 218 CRIEYNVTKFELIS 231
>CE29339 [S] KOG0295 WD40 repeat-containing protein
Length = 404
Score = 55.8 bits (133), Expect = 1e-07
Identities = 63/310 (20%), Positives = 124/310 (39%), Gaps = 47/310 (15%)
Query: 83 LATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVKL 142
+A+ S D IK W+ T + + K H V + + + ++SC D ++KL
Sbjct: 121 MASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQ------LVSCSSDLSIKL 174
Query: 143 WSVNSDDFSNVKDDTRLNTDEGIIKTFHG-EHAFQSLDHHRQKSNFVTGGAQ---IELWD 198
W DF D +K+ G EH S+ +FV ++ I+ WD
Sbjct: 175 W-----DFGQTYD---------CLKSLKGHEHTVSSVTF-LPTGDFVLSASRDHTIKQWD 219
Query: 199 TNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQTMRTN 258
+ + D + +R + N+ + AS D +V ++ T S K+V +
Sbjct: 220 ISTGYCVYTFRGHNDWVRMIRIS-NDGTLFASASLDQTVTVWSFATKSA--KLVLRDHEH 276
Query: 259 SI-C--WNPVEAFNFVIANE--------------DHNAYYYDMRNMSKALHVFKDHVSAV 301
++ C W P A+ V + D + +++ N L H + V
Sbjct: 277 AVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNI-NTGDVLFTLLAHENWV 335
Query: 302 MDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSKYIVSGSD 361
+ F P G +++ + DKT+R++++ + + V + S ++++GS
Sbjct: 336 RGLAFHPKGKYLISVADDKTLRVWELSAQRCMKAIEAHE-HFVSTVAFHQTSPFVITGSV 394
Query: 362 DGNVRLWRAK 371
D + ++W +
Sbjct: 395 DMSCKVWECR 404
>7297332 [D] KOG0642 Cell-cycle nuclear protein contains WD-40 repeats
Length = 734
Score = 55.8 bits (133), Expect = 1e-07
Identities = 76/318 (23%), Positives = 130/318 (39%), Gaps = 50/318 (15%)
Query: 83 LATASGDGVIKYWNMSTR-----------EELSSFKAHYGMVTGLCVTPSYLSPQRENFM 131
L TAS D +K WN+ E L +F+AH G V LC+ S
Sbjct: 434 LITASEDHTLKLWNLQKTVQAKKSASLDVEPLYTFRAHTGPV--LCLGMS----SSGETC 487
Query: 132 LSCGDDKTVKLW---SVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFV 188
S G D ++ W S N D + + T EG G Q SN V
Sbjct: 488 YSGGLDGNIECWQLPSPNIDPYDCYDPNVHSGTLEGHTDAVWGLTTMQ--------SNIV 539
Query: 189 TGGAQ--IELWDTNRSKPI--SNLSWGADNI-NHVRFNQNEVDILASTGSDNSVVLYDLR 243
+ A ++LW +P+ + + A+ + + V F +NEVD + + ++YD
Sbjct: 540 SCSADGTVKLWSPYNKEPLLRTYTASEAEGVPSSVDFVRNEVDHIVVAYNSAHCIVYDTE 599
Query: 244 TNSPTQKIVQTMRTNSICWNPVEAFNFVI----------ANEDHNAYYYDMRNMSKALHV 293
T +++V+ + N + N V+ A+ED + ++D +H
Sbjct: 600 TG---KQVVRLEAAQEMSGNTGKFINKVVSHPTLPITITAHEDRHIRFWD-NTSGTLVHS 655
Query: 294 FKDHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHS-REI-YHTKRM-QHIFQVKYT 350
H+ V + G +++GS+D +IR++ + + +EI H K+ + IF V +
Sbjct: 656 MVAHLEPVTSLAVDAHGLYLLSGSHDCSIRLWNLDNKTCVQEITAHRKKFDESIFDVAFH 715
Query: 351 MDSKYIVSGSDDGNVRLW 368
YI S DG +++
Sbjct: 716 ATKPYIASAGADGLAKVF 733
>YJL112w [R] KOG4155 FOG: WD40 repeat
Length = 714
Score = 55.5 bits (132), Expect = 2e-07
Identities = 67/314 (21%), Positives = 127/314 (40%), Gaps = 55/314 (17%)
Query: 89 DGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVKLWSVNS- 147
D +K W++S + ++ H + + + Y +++ G D +KLW++N
Sbjct: 420 DHTVKIWDLSKQNKIGELAGHLATINCMQINRDY------GTLVTGGRDAALKLWNLNLA 473
Query: 148 ----DDFSNVKDDTRLNTDEGIIKTFHG---EHAFQSLDHHRQKSNFVTGGAQ---IELW 197
+ N+ T + D + TF E SLD +F+ G+Q I W
Sbjct: 474 QQLYQETQNLTSPTN-HIDSPCVHTFEAHTDEVTALSLD-----PSFLVSGSQDRTIRQW 527
Query: 198 DTNRSKPISNLSWGADNINHVRFN-----------QNE---------VDILASTGSDNSV 237
D K + + N+ N +NE D +TG+ + V
Sbjct: 528 DLRSGKCLQTIDLSFANVLTTSTNVDLSKSTLLTQRNERPSIGALQSFDAALATGTKDGV 587
Query: 238 V-LYDLRTNSPTQKIVQTMR--TNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVF 294
V L+DLR+ K+++T++ T++I ++ V + D +D+R + L+ F
Sbjct: 588 VRLWDLRSG----KVIRTLKGHTDAITSLKFDSACLVTGSYDRTVRIWDLR--TGLLNKF 641
Query: 295 KDHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSK 354
+ + V+ +D VV + +++IY + S + VKY
Sbjct: 642 HAYSAPVLSLDLFQENAAVVVAD-EPSVQIYDSEKDESWSCVEQGNETSVSTVKYK--EN 698
Query: 355 YIVSGSDDGNVRLW 368
Y+V G ++G+V +W
Sbjct: 699 YMVEGRENGDVNIW 712
>SPAC227.12 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 462
Score = 55.5 bits (132), Expect = 2e-07
Identities = 60/251 (23%), Positives = 103/251 (40%), Gaps = 21/251 (8%)
Query: 81 NKLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTP--SYLSPQRENFMLSCG-DD 137
N A+ S G +K WN E+ F+ H V+GL P E L+ G D
Sbjct: 185 NHFASGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAAD 244
Query: 138 KTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFVTGGAQIELW 197
TV LW + T L EG + G AF + ++F T LW
Sbjct: 245 NTVCLWKAS--------QSTPLLRLEGHLARV-GRVAFHPSGDYLVSASFDT---TWRLW 292
Query: 198 DTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQTMR- 256
D + + ++ I + Q + +++S G+D ++DLR+ + + +R
Sbjct: 293 DVHTGVELLMQEGHSEGIFSIAC-QPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQ 351
Query: 257 TNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDE--VV 314
++ W+P + ++ D +D+R +S A H H S V DV + +G +
Sbjct: 352 IVAMAWSP-NGYQLATSSADDTVKIWDLRKVSLA-HTIPAHSSLVSDVRYIESGVNRFIA 409
Query: 315 TGSYDKTIRIY 325
T YD ++++
Sbjct: 410 TSGYDGCVKLW 420
Score = 55.1 bits (131), Expect = 2e-07
Identities = 56/237 (23%), Positives = 111/237 (46%), Gaps = 20/237 (8%)
Query: 140 VKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFVTGGAQ--IELW 197
VK+W NSD+ S V+ R +TD + Q+ D ++ TG A + LW
Sbjct: 196 VKVW--NSDNLSEVQL-FRGHTDR--VSGLDWYPLCQAWDADSEQLTLATGAADNTVCLW 250
Query: 198 DTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQTMRT 257
++S P+ L + V F+ + D L S D + L+D+ T + ++Q +
Sbjct: 251 KASQSTPLLRLEGHLARVGRVAFHPSG-DYLVSASFDTTWRLWDVHTG--VELLMQEGHS 307
Query: 258 NSICWNPVEAFNFVIANEDHNAY--YYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVT 315
I + ++++ ++A +D+R+ K++ V +H+ ++ + +SP G ++ T
Sbjct: 308 EGIFSIACQPDGSLVSSGGNDAIGRIWDLRS-GKSIMVLDEHIRQIVAMAWSPNGYQLAT 366
Query: 316 GSYDKTIRIYQVKHGHSREIYHT--KRMQHIFQVKYTMD--SKYIVSGSDDGNVRLW 368
S D T++I+ ++ + HT + V+Y +++I + DG V+LW
Sbjct: 367 SSADDTVKIWDLR---KVSLAHTIPAHSSLVSDVRYIESGVNRFIATSGYDGCVKLW 420
>CE29560 [S] KOG0300 WD40 repeat-containing protein
Length = 486
Score = 55.5 bits (132), Expect = 2e-07
Identities = 57/286 (19%), Positives = 121/286 (41%), Gaps = 40/286 (13%)
Query: 44 ALNATKLERMFAKPFVGQLGYGHRDGVYTIAKNYNVLNKLATASGDGVIKYWNMSTREEL 103
AL + R +K + +L GH+DGV+ +A + + N A+AS D + W++ + L
Sbjct: 117 ALRGPPVFRDGSKFRLSRLLEGHKDGVWHVAAD-STRNICASASADQTARIWSLESGACL 175
Query: 104 SSFKAHYGMVTGLCVTPSYLSPQREN-------FMLSCGDDKTVKLWSVNSD----DFSN 152
+++ H G V + ++ + E + + D++ +W V S+ D S+
Sbjct: 176 ATYTGHTGSVNCVAISNNCAVDSTEGSGPASGLLLATASGDESTHIWKVPSNNAPSDHSS 235
Query: 153 VKDDTR---LNTDEGIIKTFHGEHAFQSLDHHRQK---------------SNFVTGGAQI 194
+++ N G+++ + + D HR + ++ GG Q+
Sbjct: 236 EEEEEHHRDPNNLLGVVEHNRFTSSSEKSDGHRIRVPVMRLTGHRAPVSCCEWLAGGQQM 295
Query: 195 ---------ELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTN 245
+WD + + ++ LS +NH + N+ +L S+ D++ L+D R
Sbjct: 296 VTASWDRTANVWDVEKGEVVNILSGHESELNHCSTHSNQKLVLTSS-KDSTFRLWDFREA 354
Query: 246 SPTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKAL 291
+ + Q + + + + V +++D +D+RNM L
Sbjct: 355 IQSVAVFQGHQDSVTSVSFNTDYRIVSSSDDATVKIWDLRNMRTPL 400
>CE26861 [S] KOG0300 WD40 repeat-containing protein
Length = 484
Score = 55.5 bits (132), Expect = 2e-07
Identities = 57/286 (19%), Positives = 121/286 (41%), Gaps = 40/286 (13%)
Query: 44 ALNATKLERMFAKPFVGQLGYGHRDGVYTIAKNYNVLNKLATASGDGVIKYWNMSTREEL 103
AL + R +K + +L GH+DGV+ +A + + N A+AS D + W++ + L
Sbjct: 115 ALRGPPVFRDGSKFRLSRLLEGHKDGVWHVAAD-STRNICASASADQTARIWSLESGACL 173
Query: 104 SSFKAHYGMVTGLCVTPSYLSPQREN-------FMLSCGDDKTVKLWSVNSD----DFSN 152
+++ H G V + ++ + E + + D++ +W V S+ D S+
Sbjct: 174 ATYTGHTGSVNCVAISNNCAVDSTEGSGPASGLLLATASGDESTHIWKVPSNNAPSDHSS 233
Query: 153 VKDDTR---LNTDEGIIKTFHGEHAFQSLDHHRQK---------------SNFVTGGAQI 194
+++ N G+++ + + D HR + ++ GG Q+
Sbjct: 234 EEEEEHHRDPNNLLGVVEHNRFTSSSEKSDGHRIRVPVMRLTGHRAPVSCCEWLAGGQQM 293
Query: 195 ---------ELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTN 245
+WD + + ++ LS +NH + N+ +L S+ D++ L+D R
Sbjct: 294 VTASWDRTANVWDVEKGEVVNILSGHESELNHCSTHSNQKLVLTSS-KDSTFRLWDFREA 352
Query: 246 SPTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKAL 291
+ + Q + + + + V +++D +D+RNM L
Sbjct: 353 IQSVAVFQGHQDSVTSVSFNTDYRIVSSSDDATVKIWDLRNMRTPL 398
>At2g16780 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 415
Score = 55.5 bits (132), Expect = 2e-07
Identities = 46/195 (23%), Positives = 74/195 (37%), Gaps = 49/195 (25%)
Query: 124 SPQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQ 183
SP +E ++LS D+ + LW D S D LN
Sbjct: 177 SPFKEGYLLSGSQDQKICLW-----DVSATPQDKVLN----------------------- 208
Query: 184 KSNFVTGGAQIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLR 243
+ FV G + I+++SW N N + S G D +V++D R
Sbjct: 209 -AMFVYEGHE---------SAIADVSWHMKNEN----------LFGSAGEDGRLVIWDTR 248
Query: 244 TNSPTQKI-VQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVM 302
TN ++ V N + +NP + A+ D +D+R ++ LHV H V
Sbjct: 249 TNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAPLHVMSSHEGEVF 308
Query: 303 DVDFSPTGDEVVTGS 317
V++ P + V+ S
Sbjct: 309 QVEWDPNHETVLASS 323
>7302600 [R] KOG4155 FOG: WD40 repeat
Length = 1240
Score = 55.5 bits (132), Expect = 2e-07
Identities = 50/249 (20%), Positives = 105/249 (42%), Gaps = 25/249 (10%)
Query: 83 LATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVKL 142
LAT S D ++ WN++ E +SFK H V + V L ++S D + +
Sbjct: 799 LATGSEDRLVHIWNLALGEICNSFKGHTAPVVKVVVLMDSLR------VISTDRDSMLLV 852
Query: 143 WSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFVTGGAQIELWDTNRS 202
W +S + +++T G + S+ ++ + + G +++W +
Sbjct: 853 WMAHSGN---------------LLQTIQGPYKSLSVTNNMRFAVSTNGDNTLKIWSLTQE 897
Query: 203 KPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIV-QTMRTNSIC 261
++S +D I + + V I++ + D S+ ++ +Q +V + +
Sbjct: 898 DEKYSVSH-SDEITCFEISADSVHIISGS-RDMSLKVWQATGGKLSQVLVGHSDAVTCVA 955
Query: 262 WNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYDKT 321
+ + ++D N +D+ + +H H+ V+ V S G V+GS DKT
Sbjct: 956 VSVTNKTQVLSGSKDMNLILWDLLT-GEEVHTLAGHLGPVIGVKVSADGSTAVSGSDDKT 1014
Query: 322 IRIYQVKHG 330
+ +++ K G
Sbjct: 1015 LIVWETKRG 1023
>SPCC1672.10 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 430
Score = 55.1 bits (131), Expect = 2e-07
Identities = 49/214 (22%), Positives = 92/214 (42%), Gaps = 31/214 (14%)
Query: 186 NFVTGGAQ--IELWD----------TNRSKPISNLSWGADNINHVRFNQNEVDILASTGS 233
N TG I LWD T PI+ D +N V+F+ +LAS
Sbjct: 197 NLATGAEDQVICLWDVQTQSFTSSETKVISPIAKYHRHTDIVNDVQFHPQHEALLASVSD 256
Query: 234 DNSVVLYDLRTNSPTQ--KIVQ--TMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSK 289
D ++ ++D R N + K++Q + N++ NP + A+ D +D+RN +
Sbjct: 257 DCTLQIHDTRLNPEEEAPKVIQAHSKAINAVAINPFNDYLLATASADKTVALWDLRNPYQ 316
Query: 290 ALHVFKDHVSAVMDVDFSPTGDEVV-TGSYDKTIRIYQV-KHGHSRE------------I 335
LH + H V +++SP + ++ + S D+ + I+ + K G +
Sbjct: 317 RLHTLEGHEDEVYGLEWSPHDEPILASSSTDRRVCIWDLEKIGEEQTPEDAEDGSPELLF 376
Query: 336 YHTKRMQHIFQVKYTMDSKYIV-SGSDDGNVRLW 368
H I + + + +++V S +DD +++W
Sbjct: 377 MHGGHTNRISEFSWCPNERWVVGSLADDNILQIW 410
>Hs13129110 [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 342
Score = 55.1 bits (131), Expect = 2e-07
Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 21/222 (9%)
Query: 64 YGHRDGVYTIAKNYNVLNKLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYL 123
Y H D V T++ + + + S D IK W+++ + LSS++AH VT CV
Sbjct: 122 YEHDDIVSTVSV-LSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVT--CVA---A 175
Query: 124 SPQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQ 183
SP +++ LSC +D + LW DTR I + SL H Q
Sbjct: 176 SPHKDSVFLSCSEDNRILLW------------DTRCPKPASQIGCSAPGYLPTSLAWHPQ 223
Query: 184 KSN-FVTG--GAQIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLY 240
+S FV G + L DT + + + + + + + F+ + V LAS D S+ +
Sbjct: 224 QSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVL 283
Query: 241 DLRTNSPTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYY 282
D + + W+P+ DH ++
Sbjct: 284 DSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHH 325
>At5g25150 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 700
Score = 55.1 bits (131), Expect = 2e-07
Identities = 37/146 (25%), Positives = 70/146 (47%), Gaps = 11/146 (7%)
Query: 226 DILASTGSDNSVVLYDLRTNSPTQKIVQTMRTNSICWNPVEA---FNFVIANEDHNAYYY 282
D + S+ +D ++ L+ + N+ +V N W+ + F + D A +
Sbjct: 431 DFVLSSSADTTIRLWSTKLNA---NLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIW 487
Query: 283 DMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQ 342
M + + L + H+S DVD+ P + + TGS DKT+R++ V+ G I+ R
Sbjct: 488 SMDRI-QPLRIMAGHLS---DVDWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSM 543
Query: 343 HIFQVKYTMDSKYIVSGSDDGNVRLW 368
+ + + D +Y+ SG +DG + +W
Sbjct: 544 -VLSLAMSPDGRYMASGDEDGTIMMW 568
>SPBC1289.11 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 340
Score = 54.7 bits (130), Expect = 3e-07
Identities = 57/251 (22%), Positives = 104/251 (40%), Gaps = 24/251 (9%)
Query: 129 NFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFV 188
++ S G D+ + LW+V F +VK+ LN +G A L R
Sbjct: 63 SYFASGGMDRQILLWNV----FGDVKNYGVLNGCKG---------AITDLQWSRDSRVVY 109
Query: 189 TGGAQIEL--WDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNS 246
+ L WD + I A +N + + ++L S D ++ ++D R+
Sbjct: 110 CSSSDTHLMSWDAVSGQKIRKHKGHAGVVNALDVLKVGSELLTSVSDDCTMKVWDSRSKD 169
Query: 247 PTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDF 306
+ I + ++ + I D +D+RN + HV K H + +
Sbjct: 170 CIKTIEEKYPLTAVAIAQ-QGTQVFIGGIDGAIKIWDLRN-NHCSHVLKGHKDIITSLAI 227
Query: 307 SPTGDEVVTGSYDKTIRIYQVKHGHS--REIYHTKRMQH-----IFQVKYTMDSKYIVSG 359
S G +++ S D T+RI+ VK S R++ + H + V ++ +S+++ +G
Sbjct: 228 SKDGSSLLSNSMDNTVRIFDVKPFASAQRQLQIFEGAIHGQEHNLLGVAWSRNSRFVGAG 287
Query: 360 SDDGNVRLWRA 370
S D NV +W A
Sbjct: 288 SSDKNVYVWSA 298
Score = 53.5 bits (127), Expect = 7e-07
Identities = 62/280 (22%), Positives = 106/280 (37%), Gaps = 51/280 (18%)
Query: 70 VYTIAKNYNVLNKLATA----------------SGDGVIKYWNMSTREELSSFKAHYGMV 113
V+ KNY VLN A S D + W+ + +++ K H G+V
Sbjct: 79 VFGDVKNYGVLNGCKGAITDLQWSRDSRVVYCSSSDTHLMSWDAVSGQKIRKHKGHAGVV 138
Query: 114 TGLCVTPSYLSPQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEH 173
L V + S DD T+K+W S D IKT ++
Sbjct: 139 NALDVLKV-----GSELLTSVSDDCTMKVWDSRSKD---------------CIKTIEEKY 178
Query: 174 AFQSLDHHRQKSNFVTGGAQ--IELWDTNRSKPISNLSWGADNINHVRFNQNEVDILAST 231
++ +Q + GG I++WD + L D I + +++ +L S
Sbjct: 179 PLTAVAIAQQGTQVFIGGIDGAIKIWDLRNNHCSHVLKGHKDIITSLAISKDGSSLL-SN 237
Query: 232 GSDNSVVLYDLRTNSPTQKIVQTMRTN---------SICWNPVEAFNFVIANEDHNAYYY 282
DN+V ++D++ + Q+ +Q + W+ F + D N Y +
Sbjct: 238 SMDNTVRIFDVKPFASAQRQLQIFEGAIHGQEHNLLGVAWSRNSRF-VGAGSSDKNVYVW 296
Query: 283 DMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYDKTI 322
+ +V H +V VDF P D +++ S D+TI
Sbjct: 297 SATGDLR--YVLPGHEGSVNHVDFHPHQDIILSCSSDRTI 334
>Hs5031817 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 655
Score = 54.7 bits (130), Expect = 3e-07
Identities = 48/188 (25%), Positives = 87/188 (45%), Gaps = 17/188 (9%)
Query: 189 TGG--AQIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNS 246
TGG ++ LW N+ I +L+ + VR N E I+A + S S+ ++DL
Sbjct: 38 TGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQS-GSIRVWDLEA-- 94
Query: 247 PTQKIVQTMR--TNSICWNPVEAFNFVIAN--EDHNAYYYDMRNMSKALHVFKDHVSAVM 302
KI++T+ +IC + +A+ +D N +D+R ++ H AV
Sbjct: 95 --AKILRTLMGLKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFR-YRGHSQAVR 151
Query: 303 DVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIY--HTKRMQHIFQVKYTMDSKYIVSGS 360
+ FSP G + + + D T++++ + G + HT + V++ + + SGS
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVN---VVEFHPNEYLLASGS 208
Query: 361 DDGNVRLW 368
DG +R W
Sbjct: 209 SDGTIRFW 216
>ECU02g1400 [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 408
Score = 54.7 bits (130), Expect = 3e-07
Identities = 51/244 (20%), Positives = 100/244 (40%), Gaps = 21/244 (8%)
Query: 83 LATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVKL 142
L ++ G+IKYW+ S + + H V L + ++ S DD T+K+
Sbjct: 154 LISSDNFGIIKYWHPSMNN-IQIIQGHTEAVRDLSFS------HNDSKFCSASDDSTIKI 206
Query: 143 WSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFVTGGAQIELWDTNRS 202
W D K+++ L ++ H ++SL K N V ++WD +
Sbjct: 207 W-----DSIEAKEESVLRGHNWDVRAAQW-HKYKSLIASAGKDNLV------KMWDPRTA 254
Query: 203 KPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQTMR-TNSIC 261
+ + L + I +++ +E + L + G D + + D+RT + + SI
Sbjct: 255 EELCTLHHHKNTILALKWMGDE-NYLLTGGKDQVIKMVDIRTMTDVFTYKNHKKEVTSIG 313
Query: 262 WNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYDKT 321
+P FV + Y++ + + H V +D+ P G + +GS D++
Sbjct: 314 THPCIPDIFVSGGTEGGIYFWQAYTQVPLEVIEEGHEGTVWSLDYHPVGHILASGSVDQS 373
Query: 322 IRIY 325
+R +
Sbjct: 374 VRFW 377
Score = 50.1 bits (118), Expect = 7e-06
Identities = 59/289 (20%), Positives = 115/289 (39%), Gaps = 24/289 (8%)
Query: 82 KLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVK 141
+L + + G WN + +AH V G+ +PS L F++S + +K
Sbjct: 111 RLMSGTATGEFTLWNGYGCNFETILQAHESPVRGMEWSPSGL------FLISSDNFGIIK 164
Query: 142 LWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFVTGGAQIELWDTNR 201
W + ++ ++ T D S H+ K + + I++WD+
Sbjct: 165 YWHPSMNNIQIIQGHTEAVRD-------------LSFSHNDSKFCSASDDSTIKIWDSIE 211
Query: 202 SKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQTMRTN-SI 260
+K S L ++ ++++ + ++AS G DN V ++D RT + T ++
Sbjct: 212 AKEESVLRGHNWDVRAAQWHKYK-SLIASAGKDNLVKMWDPRTAEELCTLHHHKNTILAL 270
Query: 261 CWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEV-VTGSYD 319
W E + + +D D+R M+ +K+H V + P ++ V+G +
Sbjct: 271 KWMGDENY-LLTGGKDQVIKMVDIRTMTDVF-TYKNHKKEVTSIGTHPCIPDIFVSGGTE 328
Query: 320 KTIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSKYIVSGSDDGNVRLW 368
I +Q E+ ++ + Y + SGS D +VR W
Sbjct: 329 GGIYFWQAYTQVPLEVIEEGHEGTVWSLDYHPVGHILASGSVDQSVRFW 377
>CE27762 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 585
Score = 54.7 bits (130), Expect = 3e-07
Identities = 76/344 (22%), Positives = 145/344 (42%), Gaps = 45/344 (13%)
Query: 35 FERAREYTKALNATKLERMF-AKPFVGQLGY-GHRDGVYTIAKNYNVLNKLATASGDGVI 92
FERA + ++ L A K+E+ + A P +G GH D V T + ++ + L T S D +
Sbjct: 219 FERAADKSRYLRADKIEKNWNANPIMGSAVLRGHEDHVITCMQIHD--DVLVTGSDDNTL 276
Query: 93 KYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVKLWSVNSDDFSN 152
K W + E + + H G V ++ Q +++S D+TVK+WS
Sbjct: 277 KVWCIDKGEVMYTLVGHTGGVWTSQIS------QCGRYIVSGSTDRTVKVWST------- 323
Query: 153 VKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFVTGGAQ--IELWDTNRSKPISNLSW 210
D + L+T +G T S+ VTG + +WD + ++ L
Sbjct: 324 -VDGSLLHTLQGHTSTVRCMAMAGSI--------LVTGSRDTTLRVWDVESGRHLATLHG 374
Query: 211 GADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQTM--RTNSICWNPVEAF 268
+ V+F+ V S G D +V ++ N+ T + ++T+ N + E+
Sbjct: 375 HHAAVRCVQFDGTTV---VSGGYDFTVKIW----NAHTGRCIRTLTGHNNRVYSLLFESE 427
Query: 269 NFVIANE--DHNAYYYDMRNMS--KALHVFKDHVSAVMDVDFSPTGDEVVTGSYDKTIRI 324
++ + D + +D + + + + H S + G+ +V+ + D +R+
Sbjct: 428 RSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLR--GNILVSCNADSHVRV 485
Query: 325 YQVKHGHSREIYHTKRMQHIFQVKYTMDSKYIVSGSDDGNVRLW 368
+ + G + R I +++ + + SDDG V+LW
Sbjct: 486 WDIHEGTCVHMLSGHRSA-ITSLQW-FGRNMVATSSDDGTVKLW 527
>CE25007 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 587
Score = 54.7 bits (130), Expect = 3e-07
Identities = 76/344 (22%), Positives = 145/344 (42%), Gaps = 45/344 (13%)
Query: 35 FERAREYTKALNATKLERMF-AKPFVGQLGY-GHRDGVYTIAKNYNVLNKLATASGDGVI 92
FERA + ++ L A K+E+ + A P +G GH D V T + ++ + L T S D +
Sbjct: 221 FERAADKSRYLRADKIEKNWNANPIMGSAVLRGHEDHVITCMQIHD--DVLVTGSDDNTL 278
Query: 93 KYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVKLWSVNSDDFSN 152
K W + E + + H G V ++ Q +++S D+TVK+WS
Sbjct: 279 KVWCIDKGEVMYTLVGHTGGVWTSQIS------QCGRYIVSGSTDRTVKVWST------- 325
Query: 153 VKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFVTGGAQ--IELWDTNRSKPISNLSW 210
D + L+T +G T S+ VTG + +WD + ++ L
Sbjct: 326 -VDGSLLHTLQGHTSTVRCMAMAGSI--------LVTGSRDTTLRVWDVESGRHLATLHG 376
Query: 211 GADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQTM--RTNSICWNPVEAF 268
+ V+F+ V S G D +V ++ N+ T + ++T+ N + E+
Sbjct: 377 HHAAVRCVQFDGTTV---VSGGYDFTVKIW----NAHTGRCIRTLTGHNNRVYSLLFESE 429
Query: 269 NFVIANE--DHNAYYYDMRNMS--KALHVFKDHVSAVMDVDFSPTGDEVVTGSYDKTIRI 324
++ + D + +D + + + + H S + G+ +V+ + D +R+
Sbjct: 430 RSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLR--GNILVSCNADSHVRV 487
Query: 325 YQVKHGHSREIYHTKRMQHIFQVKYTMDSKYIVSGSDDGNVRLW 368
+ + G + R I +++ + + SDDG V+LW
Sbjct: 488 WDIHEGTCVHMLSGHRSA-ITSLQW-FGRNMVATSSDDGTVKLW 529
>At4g34460 [R] KOG0286 G-protein beta subunit
Length = 377
Score = 54.7 bits (130), Expect = 3e-07
Identities = 39/146 (26%), Positives = 66/146 (44%), Gaps = 7/146 (4%)
Query: 198 DTNRSKPISNLSWGADN-INHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKI---VQ 253
D + + P+S + G ++ ++ NE L ++ D + +L+D+ T T Q
Sbjct: 141 DKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQ 200
Query: 254 TMRTNSICWNPVEAFN---FVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTG 310
+ T + + N F+ + D A +D R S+A+ F H V V F P G
Sbjct: 201 SGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDG 260
Query: 311 DEVVTGSYDKTIRIYQVKHGHSREIY 336
TGS D T R+Y ++ GH ++Y
Sbjct: 261 YRFGTGSDDGTCRLYDIRTGHQLQVY 286
>YPL151c [A] KOG0285 Pleiotropic regulator 1
Length = 451
Score = 54.3 bits (129), Expect = 4e-07
Identities = 62/272 (22%), Positives = 103/272 (37%), Gaps = 58/272 (21%)
Query: 64 YGHRDGVYTIAKNYNVLNKLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYL 123
YGH GV T++ + L+ +ATA D VIK W+M TR + + H G + + TP +
Sbjct: 221 YGHLSGVRTVSI-HPTLDLIATAGRDSVIKLWDMRTRIPVITLVGHKGPINQVQCTP--V 277
Query: 124 SPQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQ 183
PQ ++S D TV+LW V + V T H + H ++
Sbjct: 278 DPQ----VVSSSTDATVRLWDVVAGKTMKV-------------LTHHKRSVRATALHPKE 320
Query: 184 KSNFVTGGAQIELWDTNRSKPISNL-SWGADNINHVRFNQNEVDILASTGSDNSVVLYDL 242
S I W ++N S IN + NQ+ D+L + G + + YD
Sbjct: 321 FSVASACTDDIRSWGLAEGSLLTNFESEKTGIINTLSINQD--DVLFAGGDNGVLSFYDY 378
Query: 243 RTNSPTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVM 302
++ Q + S+ + +V+
Sbjct: 379 KSGHKYQSLATREMVGSL-----------------------------------EGERSVL 403
Query: 303 DVDFSPTGDEVVTGSYDKTIRIYQVKHGHSRE 334
F TG ++TG DK+I+I++ ++E
Sbjct: 404 CSTFDKTGLRLITGEADKSIKIWKQDETATKE 435
Score = 53.9 bits (128), Expect = 5e-07
Identities = 60/299 (20%), Positives = 122/299 (40%), Gaps = 42/299 (14%)
Query: 85 TASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVKLWS 144
T S D +K W+++T + ++ H V + V+ R ++ S +DKTVK W
Sbjct: 157 TGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVAVS------DRHPYLFSVSEDKTVKCWD 210
Query: 145 VNSDDFSNVKDDTRLNTDEGIIKTFHGE-HAFQSLDHHRQKSNFVTGG--AQIELWDTNR 201
+ + II+ ++G +++ H T G + I+LWD
Sbjct: 211 LEKNQ---------------IIRDYYGHLSGVRTVSIHPTLDLIATAGRDSVIKLWDMRT 255
Query: 202 SKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQTMRTNSIC 261
P+ L IN V+ + +++S+ +D +V L+D+ T K++ T S+
Sbjct: 256 RIPVITLVGHKGPINQVQCTPVDPQVVSSS-TDATVRLWDV-VAGKTMKVL-THHKRSVR 312
Query: 262 WNPVEAFNFVIANEDHNAYYYDMRNMSKA----LHVFKDHVSAVMDVDFSPTGDEVVTGS 317
+ F +A +A D+R+ A L F+ + +++ D + G
Sbjct: 313 ATALHPKEFSVA----SACTDDIRSWGLAEGSLLTNFESEKTGIINTLSINQDDVLFAGG 368
Query: 318 YDKTIRIYQVKHGHSREIYHTKRM-------QHIFQVKYTMDSKYIVSGSDDGNVRLWR 369
+ + Y K GH + T+ M + + + +++G D ++++W+
Sbjct: 369 DNGVLSFYDYKSGHKYQSLATREMVGSLEGERSVLCSTFDKTGLRLITGEADKSIKIWK 427
>Hs8922679 [R] KOG0275 Conserved WD40 repeat-containing protein
Length = 513
Score = 54.3 bits (129), Expect = 4e-07
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 297 HVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSKYI 356
H V + FS ++++ S+D+TIRI+ +K G + + + + + +T D YI
Sbjct: 306 HSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRG-HSSFVNEATFTQDGHYI 364
Query: 357 VSGSDDGNVRLWRAKAWERSN 377
+S S DG V++W K E SN
Sbjct: 365 ISASSDGTVKIWNMKTTECSN 385
>7302082 [A] KOG0640 mRNA cleavage stimulating factor complex; subunit 1
Length = 424
Score = 54.3 bits (129), Expect = 4e-07
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 16/166 (9%)
Query: 213 DNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQTMRTNS---ICWNPVEAFN 269
D ++++ F+ E ILAS D +V L+D+ P+ K + T+ +C + +
Sbjct: 167 DEVSYLEFHPKE-HILASASRDGTVKLFDIA--KPSVKKAHKVFTDCEPVLCLSFHPTGD 223
Query: 270 FVIANEDHNAY-YYDMRNMSKALHVF--KDHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQ 326
+V +HN YD+ + + H + V V +SPTG TGSYD I+I+
Sbjct: 224 YVAIGTEHNVLRVYDVATTQCFVSAIPSQQHKAGVTCVKYSPTGKLYATGSYDGDIKIWD 283
Query: 327 VKHGHSREIYHTKRMQH----IFQVKYTMDSKYIVSGSDDGNVRLW 368
G S +T H I +++T + KY++S D V LW
Sbjct: 284 ---GISGRCINTIAEAHGGAAICSLEFTRNGKYLLSSGMDSLVYLW 326
>Hs7657439 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 589
Score = 53.9 bits (128), Expect = 5e-07
Identities = 29/98 (29%), Positives = 53/98 (53%), Gaps = 2/98 (2%)
Query: 274 NEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSR 333
+ED + Y+D+ + + + +++ H V D+D SP +GS+D+T R++ +
Sbjct: 361 SEDMSIRYWDLGSFTNTV-LYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPL 419
Query: 334 EIYHTKRMQHIFQVKYTMDSKYIVSGSDDGNVRLWRAK 371
IY + + VK+ +S Y+ +GS D VRLW A+
Sbjct: 420 RIY-AGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQ 456
Score = 50.1 bits (118), Expect = 7e-06
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 291 LHVFKDHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVKYT 350
L ++ H++ V V F P + + TGS DKT+R++ + G+S ++ T + + ++
Sbjct: 419 LRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLF-TGHRGPVLSLAFS 477
Query: 351 MDSKYIVSGSDDGNVRLW 368
+ KY+ S +D ++LW
Sbjct: 478 PNGKYLASAGEDQRLKLW 495
>At1g62020 [U] KOG0292 Vesicle coat complex COPI alpha subunit
Length = 1216
Score = 53.9 bits (128), Expect = 5e-07
Identities = 64/288 (22%), Positives = 115/288 (39%), Gaps = 48/288 (16%)
Query: 90 GVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVKLWSVNSDD 149
GVI+ W+ + F H G V G+ S + +S GDD +K+W
Sbjct: 31 GVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNS------QPLFVSGGDDYKIKVW------ 78
Query: 150 FSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFVTGGAQ-IELWDTNRSKPISNL 208
N K+ L T G H ++ HH Q I +W+ +S L
Sbjct: 79 --NYKNHRCLFTLLG-----HLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVL 131
Query: 209 SWGADNINHVRFNQNEVDILASTGSDNSVVLYDL-----RTNSPTQKIVQTMRTNSICWN 263
+ + F+ E D++ S D +V ++D+ +T SP I++ + NS +
Sbjct: 132 TGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGALRKKTVSPADDIMRLTQMNSDLFG 190
Query: 264 PVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYDKTIR 323
V+A +V + H V F PT +V+G+ D+ ++
Sbjct: 191 GVDAI---------------------VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVK 229
Query: 324 IYQVKHGHSREIYHTK-RMQHIFQVKYTMDSKYIVSGSDDGNVRLWRA 370
++++ + E+ + M ++ V + IVS S+D ++R+W A
Sbjct: 230 LWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDA 277
>7291678 [R] KOG0641 WD40 repeat protein
Length = 348
Score = 53.9 bits (128), Expect = 5e-07
Identities = 56/258 (21%), Positives = 107/258 (40%), Gaps = 26/258 (10%)
Query: 127 RENFMLSCG-DDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKS 185
R+ +++ G +DKT+K N+D V + LN +G ++ + F LD KS
Sbjct: 96 RDGELIATGSNDKTIKYMRFNNDTNQLVGHEMELNMHDGTVR----DMCF--LDDSSTKS 149
Query: 186 NFVTGGA----QIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYD 241
+ G +I + D P S +I + N + + S D ++ +D
Sbjct: 150 RLLASGGAGDCKIYITDCGTGTPFQAYSGHTGHILSLYSWNNAMFVSGS--QDQTIRFWD 207
Query: 242 LRTNSPTQKI--------VQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHV 293
LR N + +++ ++C +P V + D + YD+R ++ +
Sbjct: 208 LRVNVSVNTLDNDRKDGGLESSAVTAVCVDPTGRL-LVSGHADSSCTLYDIRG-NRPIQR 265
Query: 294 FKDHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQH---IFQVKYT 350
F H + + V FSP+ ++T SYD +IR+ ++ + E+ +H +++
Sbjct: 266 FYPHTAEIRCVRFSPSAYYMLTCSYDNSIRLTDLQGDLAHELSSVVVAEHKDKAITIRWH 325
Query: 351 MDSKYIVSGSDDGNVRLW 368
+S S D LW
Sbjct: 326 PTEFSFISTSADKTATLW 343
>7290895 [R] KOG0286 G-protein beta subunit
Length = 358
Score = 53.9 bits (128), Expect = 5e-07
Identities = 61/260 (23%), Positives = 109/260 (41%), Gaps = 42/260 (16%)
Query: 81 NKLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLS----PQRENFMLSCGD 136
N +A D + + +++ EE+++ K G T SY+S P + +L+
Sbjct: 125 NFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHT------SYMSCCIYPNSDQQILTGSG 178
Query: 137 DKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQ---SLDHHRQKSNFVTGGAQ 193
D T LW V S ++++FHG L + + FV+G
Sbjct: 179 DSTCALWDVESGQ---------------LLQSFHGHSGDVMAIDLAPNETGNTFVSGSCD 223
Query: 194 --IELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKI 251
+WD + + ++N V+F+ D +A+ D+S LYD+R + +
Sbjct: 224 RMAFIWDMRSGHVVQSFEGHQSDVNSVKFHPCG-DAIATGSDDSSCRLYDMRAD----RE 278
Query: 252 VQTMRTNSICWNPVEAFNFVIANE----DHNAYYYDMRNMSKALHV--FKDHVSAVMDVD 305
V SI + V + +F ++ +N Y ++ + K+ V H + V V
Sbjct: 279 VAVFAKESIIFG-VNSVDFSVSGRLLFAGYNDYTVNLWDTLKSERVCLLYGHENKVSCVQ 337
Query: 306 FSPTGDEVVTGSYDKTIRIY 325
SP G + TGS+D TIR++
Sbjct: 338 VSPDGTALSTGSWDYTIRVW 357
Score = 53.5 bits (127), Expect = 7e-07
Identities = 46/165 (27%), Positives = 80/165 (47%), Gaps = 17/165 (10%)
Query: 220 FNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQTMRTNS-----ICWNPVEAFN-FVIA 273
+ ++ IL +G D++ L+D+ + +++Q+ +S I P E N FV
Sbjct: 166 YPNSDQQILTGSG-DSTCALWDVESG----QLLQSFHGHSGDVMAIDLAPNETGNTFVSG 220
Query: 274 NEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSR 333
+ D A+ +DMR+ + F+ H S V V F P GD + TGS D + R+Y ++ R
Sbjct: 221 SCDRMAFIWDMRS-GHVVQSFEGHQSDVNSVKFHPCGDAIATGSDDSSCRLYDMR--ADR 277
Query: 334 EIYHTKRMQHIF---QVKYTMDSKYIVSGSDDGNVRLWRAKAWER 375
E+ + IF V +++ + + +G +D V LW ER
Sbjct: 278 EVAVFAKESIIFGVNSVDFSVSGRLLFAGYNDYTVNLWDTLKSER 322
>YEL056w [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 401
Score = 53.5 bits (127), Expect = 7e-07
Identities = 51/222 (22%), Positives = 95/222 (41%), Gaps = 27/222 (12%)
Query: 118 VTPSYLSPQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQS 177
+T + PQ N + + TV L+S + S +K FH ++ +
Sbjct: 121 ITRARYMPQDPNIVATINGQGTVFLYSRSEGLQSTLK--------------FHKDNGYAL 166
Query: 178 LDHHRQKSNFVTGGAQ--IELWDTNR----SKPISNLSWG---ADNINHVRFNQNEVDIL 228
K ++G + LW+ +KP+ +W +D IN +++ D+
Sbjct: 167 SFSTLVKGRLLSGSDDHTVALWEVGSGGDPTKPVR--TWNDLHSDIINDNKWHNFNKDLF 224
Query: 229 ASTGSDNSVVLYDLRTNSPTQKIVQTMRT-NSICWNPVEAFNFVIANEDHNAYYYDMRNM 287
+ D+ + + D+R N+ T V+ + N++ ++ + A D Y YD+RNM
Sbjct: 225 GTVSEDSLLKINDVRANNTTIDTVKCPQPFNTLAFSHHSSNLLAAAGMDSYVYLYDLRNM 284
Query: 288 SKALHVFKDHVSAVMDVDFSPTGDEVVTGS-YDKTIRIYQVK 328
+ LH H AV +++FS D VV S D + ++ +K
Sbjct: 285 KEPLHHMSGHEDAVNNLEFSTHVDGVVVSSGSDNRLMMWDLK 326
>SPBP22H7.07 [A] KOG0285 Pleiotropic regulator 1
Length = 473
Score = 53.5 bits (127), Expect = 7e-07
Identities = 49/198 (24%), Positives = 82/198 (40%), Gaps = 29/198 (14%)
Query: 85 TASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVKLWS 144
T +GD IK W++++ + H V GL V+P R ++ SCG+DK VK W
Sbjct: 180 TGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSP------RHPYLFSCGEDKMVKCWD 233
Query: 145 VNSDDFSNVKDDTRLNTDEGIIKTFHGE-HAFQSLDHHRQKSNFVTGG--AQIELWDTNR 201
+ ++ +I+ +HG +L H VT G A +WD
Sbjct: 234 LETNK---------------VIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRT 278
Query: 202 SKPISNLSWGADNINHVRFNQNEVDILASTGS-DNSVVLYDLRTNSPTQKIVQTMRT-NS 259
+ + LS + + E D TGS D+++ L+DL + +T +
Sbjct: 279 RQNVHVLSGHKSTVASLAV--QEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVRA 336
Query: 260 ICWNPVEAFNFVIANEDH 277
+ +P E F F + D+
Sbjct: 337 LSLHPDE-FTFASGSSDN 353
Score = 51.2 bits (121), Expect = 3e-06
Identities = 57/265 (21%), Positives = 101/265 (37%), Gaps = 61/265 (23%)
Query: 64 YGHRDGVYTIAKNYNVLNKLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYL 123
+GH GVY + K + L+ L TA D V + W+M TR+ + H V L V
Sbjct: 244 HGHLSGVYAL-KLHPTLDVLVTAGRDAVARVWDMRTRQNVHVLSGHKSTVASLAV--QEF 300
Query: 124 SPQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQ 183
PQ +++ D T++LW D + K T L H + ++L H
Sbjct: 301 DPQ----VVTGSMDSTIRLW-----DLAAGKTLTTLT---------HHKKTVRALSLHPD 342
Query: 184 KSNFVTGGA-QIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDN-SVVLYD 241
+ F +G + I+ W + N +N + N + V +G+DN S+ +D
Sbjct: 343 EFTFASGSSDNIKHWKFPEGAFMGNFEGHNAIVNTLSINSDNV---MFSGADNGSMCFWD 399
Query: 242 LRTNSPTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAV 301
++ Q++ ++ S+ D + +
Sbjct: 400 WKSGHKYQELQSVVQPGSL-----------------------------------DSEAGI 424
Query: 302 MDVDFSPTGDEVVTGSYDKTIRIYQ 326
F TG ++T DK+++IY+
Sbjct: 425 FASSFDKTGLRLITCEADKSVKIYK 449
>SPAC29A4.18 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 431
Score = 53.5 bits (127), Expect = 7e-07
Identities = 34/148 (22%), Positives = 65/148 (42%), Gaps = 14/148 (9%)
Query: 184 KSNFVTGG--AQIELWDTNRSKPISN-------LSWGADNINHVRFNQNEVDILASTGSD 234
K V+G A + WD N + +S ++ VRF+ D+LAS D
Sbjct: 197 KGTLVSGSQDATLSCWDLNAYNESDSASVLKVHISSHEKQVSDVRFHYKHQDLLASVSYD 256
Query: 235 NSVVLYDLRTNSPTQKIVQTMRTNS-----ICWNPVEAFNFVIANEDHNAYYYDMRNMSK 289
+ ++D+R + K +++ +S + +NP F + D +D+RN+++
Sbjct: 257 QYLHVHDIRRPDASTKPARSVHAHSGPIHSVAFNPHNDFILATCSTDKTIALWDLRNLNQ 316
Query: 290 ALHVFKDHVSAVMDVDFSPTGDEVVTGS 317
LH + H V + FSP + ++ +
Sbjct: 317 RLHTLEGHEDIVTKISFSPHEEPILAST 344
>Hs8923881 [R] KOG0266 WD40 repeat-containing protein
Length = 404
Score = 53.5 bits (127), Expect = 7e-07
Identities = 40/188 (21%), Positives = 85/188 (44%), Gaps = 13/188 (6%)
Query: 193 QIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIV 252
QI++W+ + NLS D + + F + IL S D ++ ++DL + +++
Sbjct: 134 QIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVL 193
Query: 253 QT-MRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGD 311
++ C + A + + + + MR+ + + + H S+V+ DFSP
Sbjct: 194 SGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYT-LIRKLEGHQSSVVSCDFSPDSA 252
Query: 312 EVVTGSYDKTIRIYQVKHGHS-REIYHTK----------RMQHIFQVKYTMDSKYIVSGS 360
+VT SYD + ++ G R ++HT+ + + V ++ + Y+ + +
Sbjct: 253 LLVTASYDTNVIMWDPYTGERLRSLHHTQVDPAMDDSDVHISSLRSVCFSPEGLYLATVA 312
Query: 361 DDGNVRLW 368
DD +R+W
Sbjct: 313 DDRLLRIW 320
>Hs7705258 [U] KOG0307 Vesicle coat complex COPII subunit SEC31
Length = 1181
Score = 53.5 bits (127), Expect = 7e-07
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 16/153 (10%)
Query: 176 QSLDHHRQKSNFVTGGA---QIELWDTNRSKPISNLSWGA-----DNINHVRFNQNEVDI 227
++LD + ++N V GA +I +WD N + ++ GA ++I+ + +N+ I
Sbjct: 126 RALDVNIFQTNLVASGANESEIYIWDLNNFA--TPMTPGAKTQPPEDISCIAWNRQVQHI 183
Query: 228 LASTGSDNSVVLYDLRTNSPTQKI---VQTMRTNSICWNPVEAFNFVIANEDHN---AYY 281
LAS ++DLR N P K+ M + + W+P A V+A+ED
Sbjct: 184 LASASPSGRATVWDLRENEPIIKVSDHSNRMHCSGLAWHPDVATQMVLASEDDRLPVIQM 243
Query: 282 YDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVV 314
+D+R S L V ++H ++ + +S E++
Sbjct: 244 WDLRFASSPLRVLENHARGILAIAWSMADPELL 276
>Hs7662370 [U] KOG0307 Vesicle coat complex COPII subunit SEC31
Length = 1220
Score = 53.5 bits (127), Expect = 7e-07
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 16/153 (10%)
Query: 176 QSLDHHRQKSNFVTGGA---QIELWDTNRSKPISNLSWGA-----DNINHVRFNQNEVDI 227
++LD + ++N V GA +I +WD N + ++ GA ++I+ + +N+ I
Sbjct: 126 RALDVNIFQTNLVASGANESEIYIWDLNNFA--TPMTPGAKTQPPEDISCIAWNRQVQHI 183
Query: 228 LASTGSDNSVVLYDLRTNSPTQKI---VQTMRTNSICWNPVEAFNFVIANEDHN---AYY 281
LAS ++DLR N P K+ M + + W+P A V+A+ED
Sbjct: 184 LASASPSGRATVWDLRKNEPIIKVSDHSNRMHCSGLAWHPDVATQMVLASEDDRLPVIQM 243
Query: 282 YDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVV 314
+D+R S L V ++H ++ + +S E++
Sbjct: 244 WDLRFASSPLRVLENHARGILAIAWSMADPELL 276
>Hs14784298 [R] KOG4227 WD40 repeat protein
Length = 942
Score = 53.5 bits (127), Expect = 7e-07
Identities = 69/279 (24%), Positives = 114/279 (40%), Gaps = 34/279 (12%)
Query: 109 HYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKT 168
H+G CV S +++S GDD+ V LW + S VK +K
Sbjct: 52 HFG-----CVNAIEFSNNGGQWLVSGGDDRRVLLWHMEQAIHSRVKPIQ--------LKG 98
Query: 169 FHGEHAFQSLDHHRQKSNFVTGG--AQIELWDTNRSKPISNLSWGADNINHVRFNQNEVD 226
H + F L + + +GG Q+ L D S+ + + D + + + +
Sbjct: 99 EHHSNIF-CLAFNSGNTKVFSGGNDEQVILHDVESSETLDVFAH-EDAVYGLSVSPVNDN 156
Query: 227 ILASTGSDNSVVLYDLRTN---SPTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYD 283
I AS+ D V+++D+R + P +S+ +NPVE AN +D
Sbjct: 157 IFASSSDDGRVLIWDIRESPHGEPFCLANYPSAFHSVMFNPVEPRLLATANSKEGVGLWD 216
Query: 284 MRNMSKALHVFKDHVS--AVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRM 341
+R +L + ++S + M V F+ G +++ +Y + HSR
Sbjct: 217 IRKPQSSLLRYGGNLSLQSAMSVRFNSNGTQLLALRRRLPPVLYDI---HSRLPVFQFDN 273
Query: 342 QHIFQVKYTMDS--------KYIVSGSDDGNVRLWRAKA 372
Q F TM S +YI+SGSDD N+ +WR A
Sbjct: 274 QGYFN-SCTMKSCCFAGDRDQYILSGSDDFNLYMWRIPA 311
>Hs4758558 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 522
Score = 53.1 bits (126), Expect = 9e-07
Identities = 54/249 (21%), Positives = 92/249 (36%), Gaps = 25/249 (10%)
Query: 83 LATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVKL 142
LA+ + DG +K W++ + E ++ + H V + PS F+ + D++ +L
Sbjct: 296 LASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPS------GRFLGTTCYDRSWRL 349
Query: 143 WSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFVTGGAQI--ELWDTN 200
W L E I+ + H+ S TGG +WD
Sbjct: 350 WD--------------LEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLR 395
Query: 201 RSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKI-VQTMRTNS 259
+ I L I + F+ N I +G DN+ ++DLR I
Sbjct: 396 TGRCIMFLEGHLKEIYGINFSPNGYHIATGSG-DNTCKVWDLRQRRCVYTIPAHQNLVTG 454
Query: 260 ICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYD 319
+ + P+ NF++ N L H VM +D S G + T SYD
Sbjct: 455 VKFEPIHG-NFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYD 513
Query: 320 KTIRIYQVK 328
+T +++ +
Sbjct: 514 RTFKLWMAE 522
>CE18578 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 331
Score = 53.1 bits (126), Expect = 9e-07
Identities = 46/256 (17%), Positives = 101/256 (38%), Gaps = 42/256 (16%)
Query: 131 MLSCGDDKTVKLWSV--NSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFV 188
+ + G D+ + W+V ++FS +K + A L S+ V
Sbjct: 53 LATSGYDQKIFFWNVYGECENFSTIKGHSG---------------AVMDLKFTTDSSSLV 97
Query: 189 TGGAQ--IELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNS 246
+ G + +WD D +N V ++ V ++AS D + ++D+RT
Sbjct: 98 SCGTDKSVRVWDMETGTCARRFRTHTDFVNAVHPSRRGVTLVASASDDGTCRVHDMRTKE 157
Query: 247 PTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDF 306
P + + ++ +N + + D+ +DMR + + H + +
Sbjct: 158 PVKTYTNRYQQTAVTFND-SSDQVISGGIDNVLKVWDMRR-DEITYTLTGHRDTITGISL 215
Query: 307 SPTGDEVVTGSYDKTIRIYQVK--------------HGHSREIYHTKRMQHIFQVKYTMD 352
SP+G +++ S D T+R + ++ H H+ E +++ + ++
Sbjct: 216 SPSGKFIISNSMDCTVRQWDIRPFVPGQRSVGVFAGHNHNFE-------KNLLKCSWSPC 268
Query: 353 SKYIVSGSDDGNVRLW 368
++I +GS D + +W
Sbjct: 269 ERFITAGSSDRFLYVW 284
>At1g61210 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 282
Score = 53.1 bits (126), Expect = 9e-07
Identities = 66/278 (23%), Positives = 106/278 (37%), Gaps = 50/278 (17%)
Query: 63 GYGHRDGVYTIAKNYNVLNKLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSY 122
GY R + TI +N+N + E L F AH V L +
Sbjct: 5 GYKLRILILTILRNFN-----------------SFFITESLGEFLAHSANVNCLSI---- 43
Query: 123 LSPQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHR 182
+ ++ GDD V LW++ T L ++ I F+ +QSL H
Sbjct: 44 -GKKTSRLFITGGDDYKVNLWAIGKP--------TSLMKNDAI--AFY----WQSLCGHT 88
Query: 183 QKSN---------FVTGGAQ---IELWDTNRSKPISNLSWGADNINHVRFNQNEVDILAS 230
+ V GA I+LWD +K + + N + V F+ + LAS
Sbjct: 89 SAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFG-EFLAS 147
Query: 231 TGSDNSVVLYDLRTNSPTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKA 290
SD ++ ++D+R Q R S + V D+ +D+ K
Sbjct: 148 GSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDL-TAGKL 206
Query: 291 LHVFKDHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVK 328
LH FK H + +DF P + TGS D+T++ + ++
Sbjct: 207 LHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWDLE 244
>7297759 [Z] KOG0313 Microtubule binding protein YTM1 (contains WD40
repeats)
Length = 420
Score = 53.1 bits (126), Expect = 9e-07
Identities = 56/251 (22%), Positives = 104/251 (41%), Gaps = 22/251 (8%)
Query: 95 WNMSTR--EELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVKLWSVNSDDFSN 152
WN+ + E +S K H V + V+P L ++ D +K+WS DD
Sbjct: 177 WNVGSNSVECVSVCKGHERGVDSVSVSPDGLRFATGSW------DTMLKVWSAELDDA-- 228
Query: 153 VKDDTRLNTDEGIIK---TFHGEHAFQSLDHHRQKSNFVTGGAQ--IELWDTNRSKPISN 207
V+ ++ + G+ T G S + +TG +++WD + +
Sbjct: 229 VEGSSKRMKESGVRTPKITLQGHRESVSAVQWMDATTLLTGSWDHTLKVWDLSLEGIKTE 288
Query: 208 LSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPT----QKIVQTMRTNSICWN 263
+S + N + + AS +D ++ LYD RTN + + ++ W+
Sbjct: 289 ISTNKSIFDASYSKLNRLILTAS--ADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWS 346
Query: 264 PVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYDKTIR 323
E F FV D+ +D R+ L+ H V+D+D+S +V+G D T+R
Sbjct: 347 TTEEFLFVSGAYDNQNKLWDCRSPKAPLYDLLGHGEKVLDIDWS-NPKYIVSGGVDNTVR 405
Query: 324 IYQVKHGHSRE 334
+++ + + E
Sbjct: 406 VFKSRKALAEE 416
>YBR198c [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 798
Score = 52.8 bits (125), Expect = 1e-06
Identities = 44/166 (26%), Positives = 75/166 (44%), Gaps = 14/166 (8%)
Query: 228 LASTGSDNSVVLYDLRTNSPTQKIVQTMRTNSICWN----PVEAFNFVIANEDHNAYYYD 283
L S D +V L+ + T++ +V N W+ P+ + F A+ D A +
Sbjct: 540 LLSGSEDKTVRLWSMDTHTA---LVSYKGHNHPVWDVSFSPLGHY-FATASHDQTARLWS 595
Query: 284 MRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIY--HTKRM 341
++ L +F H++ V V F P G V TGS DKT R++ V G S ++ HT
Sbjct: 596 CDHIYP-LRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAP- 653
Query: 342 QHIFQVKYTMDSKYIVSGSDDGNVRLWRAKAWERSNAKSTREKNKL 387
+ + D +++ +GS+DG + +W +R KN +
Sbjct: 654 --VISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAI 697
>SPCC5E4.03c [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 643
Score = 52.8 bits (125), Expect = 1e-06
Identities = 53/242 (21%), Positives = 95/242 (38%), Gaps = 45/242 (18%)
Query: 128 ENFMLSCG-DDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSN 186
++ M++CG + ++LWS+ +D S K T + +G ++
Sbjct: 335 DSTMIACGFQESYIRLWSIKADKKSLPKS-TSVEDSDGSVRLL----------------- 376
Query: 187 FVTGGAQIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNS 246
+ S P+ ++ DN + +++ L S + ++V Y T
Sbjct: 377 -------------SHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGP 423
Query: 247 PTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDF 306
+ + P + F A+ D A + ++ L VF H+S V V F
Sbjct: 424 VWD----------VAFGPFGHY-FATASHDQTAQLWSCDHIYP-LRVFAGHLSDVDCVTF 471
Query: 307 SPTGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSKYIVSGSDDGNVR 366
P V+TGS DKT R++ V GHS +++ Q + V D + S +G +
Sbjct: 472 HPNSAYVLTGSSDKTCRLWDVHRGHSVRVFN-GHTQPVTAVAIAPDGHTMASADSEGLIH 530
Query: 367 LW 368
LW
Sbjct: 531 LW 532
>SPAC630.14c [R] KOG0266 WD40 repeat-containing protein
Length = 586
Score = 52.8 bits (125), Expect = 1e-06
Identities = 42/187 (22%), Positives = 81/187 (42%), Gaps = 15/187 (8%)
Query: 193 QIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIV 252
QI +WD + + L+ I + F+++ +++ +G D +V L+D+ +
Sbjct: 357 QIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSG-DRTVCLWDVEAGEQKLILH 415
Query: 253 QTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDE 312
++ ++P F + + + + + LH H +V V FSP G
Sbjct: 416 TDDGVTTVMFSPDGQFIAAGSLDKVIRIWTSSGTLVEQLH---GHEESVYSVAFSPDGKY 472
Query: 313 VVTGSYDKTIRIYQV-----------KHGHSREIYHTKRMQHIFQVKYTMDSKYIVSGSD 361
+V+GS D TI+++++ K G + T I V + D K+I+SGS
Sbjct: 473 LVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSK 532
Query: 362 DGNVRLW 368
D ++ W
Sbjct: 533 DRTIQFW 539
Score = 49.7 bits (117), Expect = 1e-05
Identities = 36/161 (22%), Positives = 76/161 (46%), Gaps = 13/161 (8%)
Query: 215 INHVRFNQNEVDILASTGSDNSVVLYDLRTNS-------PTQKIVQTMRTNSICWNPVEA 267
I +VRF+ + + +TG + + +++++ T + K + S+ ++P
Sbjct: 290 ICYVRFSADGKFL--ATGCNRAAMVFNVETGKLITLLQEESSKREGDLYVRSVAFSPDGK 347
Query: 268 FNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQV 327
+ ED +D+ + + H + +DFS G +V+GS D+T+ ++ V
Sbjct: 348 Y-LATGVEDQQIRIWDIAQ-KRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDV 405
Query: 328 KHGHSREIYHTKRMQHIFQVKYTMDSKYIVSGSDDGNVRLW 368
+ G + I HT + V ++ D ++I +GS D +R+W
Sbjct: 406 EAGEQKLILHTD--DGVTTVMFSPDGQFIAAGSLDKVIRIW 444
>Hs5729852 [R] KOG0286 G-protein beta subunit
Length = 353
Score = 52.8 bits (125), Expect = 1e-06
Identities = 40/155 (25%), Positives = 75/155 (47%), Gaps = 11/155 (7%)
Query: 220 FNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQTMRTNSICWN--PVEAFN-FVIANED 276
F +++ IL ++G D + L+D+ + Q + +C + P E N FV D
Sbjct: 161 FTNSDMQILTASG-DGTCALWDVESGQLLQSF-HGHGADVLCLDLAPSETGNTFVSGGCD 218
Query: 277 HNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIY 336
A +DMR+ + + F+ H S + V + P+GD +GS D T R+Y ++ IY
Sbjct: 219 KKAMVWDMRS-GQCVQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDLRADREVAIY 277
Query: 337 HTKRMQHIF---QVKYTMDSKYIVSGSDDGNVRLW 368
+ + IF V +++ + + +G +D + +W
Sbjct: 278 SKESI--IFGASSVDFSLSGRLLFAGYNDYTINVW 310
>Hs22048320 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 345
Score = 52.8 bits (125), Expect = 1e-06
Identities = 47/192 (24%), Positives = 88/192 (45%), Gaps = 20/192 (10%)
Query: 220 FNQNEVDILASTGSDNSVVLYDL-------RTNSPTQKIVQTMRTNSICWNPVEAFNFVI 272
+N N L S D++V L+D+ + ++ T T + WN + F +
Sbjct: 100 WNPNLSGHLLSASDDHTVCLWDISAIPKEGKVDARTIFTGHTAVVEDVFWNLLHESLFRL 159
Query: 273 ANEDHNAYYYDMR--NMSKALHVFKDHVSAVMDVDFSPTGDEVV-TGSYDKTIRIYQVKH 329
+D +D R N SK H + + V + F+P G+ ++ TGS DKT+ ++ +++
Sbjct: 160 VADDQKLMIWDTRSKNTSKPSHSVDAYTAEVNCLSFNPYGEFILATGSADKTVALWDLRN 219
Query: 330 GHSREIYHTKRMQHIFQVKYTMDSKYIV--SGSDDGNVRLWRAKAWERSNAKSTREKNKL 387
+ IFQV+++ ++ I+ SG+D G W+ S K T E++
Sbjct: 220 LKLKVHSFESHKDEIFQVQWSPHNETILASSGTDHG------LNVWDLS--KITEEQSPE 271
Query: 388 EYDEKLKERFKH 399
+ +++ E F H
Sbjct: 272 DAEDRPPELFIH 283
>Hs20336270 [R] KOG0286 G-protein beta subunit
Length = 395
Score = 52.8 bits (125), Expect = 1e-06
Identities = 40/155 (25%), Positives = 75/155 (47%), Gaps = 11/155 (7%)
Query: 220 FNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQTMRTNSICWN--PVEAFN-FVIANED 276
F +++ IL ++G D + L+D+ + Q + +C + P E N FV D
Sbjct: 203 FTNSDMQILTASG-DGTCALWDVESGQLLQSF-HGHGADVLCLDLAPSETGNTFVSGGCD 260
Query: 277 HNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIY 336
A +DMR+ + + F+ H S + V + P+GD +GS D T R+Y ++ IY
Sbjct: 261 KKAMVWDMRS-GQCVQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDLRADREVAIY 319
Query: 337 HTKRMQHIF---QVKYTMDSKYIVSGSDDGNVRLW 368
+ + IF V +++ + + +G +D + +W
Sbjct: 320 SKESI--IFGASSVDFSLSGRLLFAGYNDYTINVW 352
>Hs14149696 [U] KOG0307 Vesicle coat complex COPII subunit SEC31
Length = 1179
Score = 52.8 bits (125), Expect = 1e-06
Identities = 54/218 (24%), Positives = 96/218 (43%), Gaps = 18/218 (8%)
Query: 174 AFQSLDHHRQKSNFVTGGA---QIELWDTNR-SKPI---SNLSWGADNINHVRFNQNEVD 226
A ++LD + + N + GA +I +WD N + P+ S ++I + +N+
Sbjct: 123 AVRALDLNPFQGNLLASGASDSEIFIWDLNNLNVPMTLGSKSQQPPEDIKALSWNRQAQH 182
Query: 227 ILASTGSDNSVVLYDLRTNSPTQKI---VQTMRTNSICWNPVEAFNFVIANEDHN---AY 280
IL+S V++DLR N P K+ M + + W+P A V+ +ED
Sbjct: 183 ILSSAHPSGKAVVWDLRKNEPIIKVSDHSNRMHCSGLAWHPDIATQLVLCSEDDRLPVIQ 242
Query: 281 YYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYH-TK 339
+D+R S L V + H ++ V +S E++ S K +I G S +Y
Sbjct: 243 LWDLRFASSPLKVLESHSRGILSVSWSQADAELLLTS-AKDSQILCRNLGSSEVVYKLPT 301
Query: 340 RMQHIFQVKY-TMDSKYIVSGSDDGNVRLW--RAKAWE 374
+ F V++ D + S +G + L+ ++WE
Sbjct: 302 QSSWCFDVQWCPRDPSVFSAASFNGWISLYSVMGRSWE 339
>At2g21390 [U] KOG0292 Vesicle coat complex COPI alpha subunit
Length = 1218
Score = 52.8 bits (125), Expect = 1e-06
Identities = 62/289 (21%), Positives = 118/289 (40%), Gaps = 50/289 (17%)
Query: 90 GVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVKLWSVNSDD 149
GVI+ W+ + F H G V G+ S + +S GDD +K+W
Sbjct: 31 GVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNS------QPLFVSGGDDYKIKVW------ 78
Query: 150 FSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFVTGGAQ--IELWDTNRSKPISN 207
N K L T G H ++ +++ H + V+ I +W+ IS
Sbjct: 79 --NYKTHRCLFTLLG-----HLDY-IRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISV 130
Query: 208 LSWGADNINHVRFNQNEVDILASTGSDNSVVLYDL-----RTNSPTQKIVQTMRTNSICW 262
L+ + F+ E D++ S D +V ++D+ ++ SP +++ + NS +
Sbjct: 131 LTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGALKKKSASPADDLMRFSQMNSDLF 189
Query: 263 NPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYDKTI 322
V+A +V + H V F PT +V+G+ D+ +
Sbjct: 190 GGVDAI---------------------VKYVLEGHDRGVNWASFHPTLPLIVSGADDRQV 228
Query: 323 RIYQVKHGHSREIYHTK-RMQHIFQVKYTMDSKYIVSGSDDGNVRLWRA 370
+++++ + E+ + M ++ V + IVS S+D ++R+W A
Sbjct: 229 KLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDA 277
>7298279 [S] KOG0316 Conserved WD40 repeat-containing protein
Length = 277
Score = 52.8 bits (125), Expect = 1e-06
Identities = 60/244 (24%), Positives = 96/244 (38%), Gaps = 33/244 (13%)
Query: 130 FMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQ-KSNFV 188
+ LSCG DK +KLW N G++ +G HA + D S+++
Sbjct: 31 YCLSCGSDKKIKLW----------------NPASGLLLKTYGGHADEVTDAAGSCDSSYI 74
Query: 189 TGGA---QIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTN 245
+ I WD + P+ L A + V FN++ I S G DN+V+ +D+RT
Sbjct: 75 VSASLDKSIIYWDVSTGAPVRRLRSHAGGVRCVCFNEDS-SIAISGGRDNAVMCWDIRTR 133
Query: 246 SPTQKIVQTMRTNSICWNPV--EAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMD 303
VQ M+ C V A+ D YD+R + ++ +
Sbjct: 134 RLDP--VQVMKEARDCITTVATNENRIYAASLDGCVRTYDIRVGELTCDKIGEPITYL-- 189
Query: 304 VDFSPTGDE--VVTGSYDKTIRIYQVKHGHSREIYHTKR-MQHIFQVKYTMDSKYIVSGS 360
+ T DE +V G D +R+ + G Y R + + + IV+GS
Sbjct: 190 ---AQTRDEQCLVAGCQDSVVRLLDCETGGLLSEYRGHRGDDYHIECGILSNDAQIVTGS 246
Query: 361 DDGN 364
DG+
Sbjct: 247 SDGD 250
>7296910 [JT] KOG0643 Translation initiation factor 3 subunit i
(eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1)
Length = 326
Score = 52.8 bits (125), Expect = 1e-06
Identities = 60/295 (20%), Positives = 111/295 (37%), Gaps = 35/295 (11%)
Query: 129 NFMLSCGDDKTVKLW-SVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNF 187
+ + SC D+ +W S+N + RL T +G + A LD +
Sbjct: 23 DLLFSCSKDQKPNVWYSLNGE---------RLGTYDG------HQGAVWCLDVDWESRKL 67
Query: 188 VTGGAQI--ELWDTNRSKPISNLSWGAD-NINHVRFNQNEVDILASTGSDNSVVLY---- 240
+TG + ++WD I+++ + ++ F+ N+ S L+
Sbjct: 68 ITGAGDMTAKIWDVEYGTVIASIPTKSSVRTSNFSFSGNQAAYSTDKAMGQSCELFLIDV 127
Query: 241 -----DLRTNSPTQKIVQT-MRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVF 294
L PT +I T + S+ W P++ + +++ N +D+R K +
Sbjct: 128 RNADSSLSEQEPTLRIPMTESKITSMLWGPLDE-TIITGHDNGNIAIWDIRKGQKVVDSG 186
Query: 295 KDHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSK 354
DH + + D+ S G VT S D T +++ + + Y T+R + + MD
Sbjct: 187 TDHSAGINDMQLSKDGTMFVTASKDTTAKLFDSESLMCLKTYKTERPVNSAAISPIMDHV 246
Query: 355 YIVSGSDDGNVRLWRAKAWERSNAKSTREKNKLEYDEKLKERFKHMPEVRRISRH 409
+ G D V KA K L Y+E+ H + ++ H
Sbjct: 247 VLGGGQDAMEVTTTSTKA-----GKFDSRFFHLIYEEEFARLKGHFGPINSLAFH 296
>YCR084c [R] KOG0266 WD40 repeat-containing protein
Length = 713
Score = 52.4 bits (124), Expect = 1e-06
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 259 SICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSY 318
S+C++P F ED +D+ N K + + + H + +D+ P+GD++V+GS
Sbjct: 448 SVCFSPDGKF-LATGAEDRLIRIWDIENR-KIVMILQGHEQDIYSLDYFPSGDKLVSGSG 505
Query: 319 DKTIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSKYIVSGSDDGNVRLW 368
D+T+RI+ ++ G + V D KYI +GS D VR+W
Sbjct: 506 DRTVRIWDLRTGQCSLTLSIEDGVTTVAVS-PGDGKYIAAGSLDRAVRVW 554
Score = 52.0 bits (123), Expect = 2e-06
Identities = 43/206 (20%), Positives = 86/206 (40%), Gaps = 21/206 (10%)
Query: 187 FVTGGAQ---IELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLR 243
F+ GA+ I +WD K + L +I + + + D L S D +V ++DLR
Sbjct: 457 FLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSG-DKLVSGSGDRTVRIWDLR 515
Query: 244 TNSPTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYD------MRNMSKALHVFKDH 297
T + + ++ +P + + D +D + + H
Sbjct: 516 TGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGH 575
Query: 298 VSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSR-----------EIYHTKRMQHIFQ 346
+V V F+ G VV+GS D++++++ +++ +++ E+ + +
Sbjct: 576 KDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLS 635
Query: 347 VKYTMDSKYIVSGSDDGNVRLWRAKA 372
V T + +YI+SGS D V W K+
Sbjct: 636 VATTQNDEYILSGSKDRGVLFWDKKS 661
>Hs4507283 [D] KOG0642 Cell-cycle nuclear protein contains WD-40 repeats
Length = 780
Score = 52.4 bits (124), Expect = 1e-06
Identities = 78/335 (23%), Positives = 135/335 (40%), Gaps = 49/335 (14%)
Query: 66 HRDGVYTIAKNYNVLNKLATASGDGVIKYWNMSTR-----------EELSSFKAHYGMVT 114
H DG+ +A + + L TAS D +K WN+ E + +F+AH G V
Sbjct: 462 HFDGIRALAF-HPIEPVLITASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAHKGPV- 519
Query: 115 GLCVTPSYLSPQRENFMLSCGDDKTVKLWSV---NSDDFSNVKDDTRLNTDEGIIKTFHG 171
LCV S Q S G D ++ W+ N D + + G G
Sbjct: 520 -LCVVMSSNGEQ----CYSGGTDGLIQGWNTTNPNIDPYDSYDPSVLRGPLLGHTDAVWG 574
Query: 172 EHAFQSLDHHRQKSNFVTGGAQIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILAST 231
S H R S G + LW+T P ++ ++I + + VD+++S
Sbjct: 575 --LAYSAAHQRLLSCSADG--TLRLWNTTEVAPALSVF---NDIKELGIPAS-VDLVSSD 626
Query: 232 GSDNSVVL---YDLRTNSPTQKIVQTMRTN------------SICWNPVEAFNFVIANED 276
S Y N TQ+ + T+ +N + +P + + + A+ED
Sbjct: 627 PSHMVASFSKGYTSIFNMETQQRILTLESNVDTTANSSCQINRVISHPTLSIS-ITAHED 685
Query: 277 HNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIY 336
+ +YD N K +H H+ AV + P G +++GS+D +IR++ ++ + +
Sbjct: 686 RHIKFYD-NNTGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSHDCSIRLWNLESKTCIQEF 744
Query: 337 --HTKRMQH-IFQVKYTMDSKYIVSGSDDGNVRLW 368
H K+ + I V + YI S D +++
Sbjct: 745 TAHRKKFEESIHDVAFHPSKCYIASAGADALAKVF 779
>At4g15900 [A] KOG0285 Pleiotropic regulator 1
Length = 486
Score = 52.0 bits (123), Expect = 2e-06
Identities = 68/317 (21%), Positives = 120/317 (37%), Gaps = 39/317 (12%)
Query: 65 GHRDGVYTIAKNYNVLNK-LATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYL 123
GH V ++A ++ N+ T S D IK W+++T + H V GL V+
Sbjct: 174 GHLGWVRSVA--FDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVS---- 227
Query: 124 SPQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGE-HAFQSLDHHR 182
R +M S GDDK VK W + + +I+++HG L H
Sbjct: 228 --NRHTYMFSAGDDKQVKCWDLEQNK---------------VIRSYHGHLSGVYCLALHP 270
Query: 183 QKSNFVTGG--AQIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLY 240
+TGG + +WD I LS G DN F + + + D ++ +
Sbjct: 271 TLDVLLTGGRDSVCRVWDIRTKMQIFALS-GHDNTVCSVFTRPTDPQVVTGSHDTTIKFW 329
Query: 241 DLRTNSPTQKIVQTMRT-NSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVS 299
DLR + ++ ++ +P E F A+ D+ + + H
Sbjct: 330 DLRYGKTMSTLTHHKKSVRAMTLHPKEN-AFASASADNTKKF--SLPKGEFCHNMLSQQK 386
Query: 300 AVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYHT-------KRMQHIFQVKYTMD 352
+++ +VTG + +I + K GHS + T + I+ Y
Sbjct: 387 TIINAMAVNEDGVMVTGGDNGSIWFWDWKSGHSFQQSETIVQPGSLESEAGIYAACYDNT 446
Query: 353 SKYIVSGSDDGNVRLWR 369
+V+ D +++W+
Sbjct: 447 GSRLVTCEADKTIKMWK 463
>7292151 [R] KOG1334 WD40 repeat protein
Length = 748
Score = 52.0 bits (123), Expect = 2e-06
Identities = 72/342 (21%), Positives = 141/342 (41%), Gaps = 75/342 (21%)
Query: 73 IAKNYNVLNKL------ATASGDGVIKYWNMSTREE---LSSFKAHYGMVTGLCVTPSYL 123
+ + +N++N++ +AS G Y + E+ LSS H+G V L
Sbjct: 280 LQREHNIINRIDWRGGHTSASSFGQGYYGSRQVVEQMTLLSSLNVHHGCVNSLNFN---- 335
Query: 124 SPQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQ 183
+ + + S DD T+ +W D++ K R + H + FQ+
Sbjct: 336 --RAGDLICSGSDDLTIVVW-----DWAKEKQLHRFRSG-------HNMNIFQT------ 375
Query: 184 KSNFVTGGAQIELWDTNRS---------------KPISNLSWGADNINHVRFNQNEVDIL 228
F+ +++ ++R KPI L +++++ + + L
Sbjct: 376 --KFIDSAGCLDIVSSSRDGQVRRSVIPPSGGVIKPI-RLYTHSESVHKIIVVPHSRHEL 432
Query: 229 ASTGSDNSVVLYDLRTNSPTQKIVQTM----------RTNSICWNPVEAFNFVIANEDHN 278
S G D +V +DLR ++ +++ + R SI +P A F ++ D
Sbjct: 433 MSAGEDAAVKHFDLRASNAATTMMRCVYNDENERGRVRLFSIAHHPY-APEFCVSGSDDI 491
Query: 279 AYYYDMRNMSKALH------VFKDHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHS 332
YD RN++KA+H + + ++ + ++ +G E++ D I ++ ++ +
Sbjct: 492 LRVYDKRNLAKAIHQMAPRNLLEAQITQITCAVYNHSGSEILASYSDAGIYLFDSRNYNR 551
Query: 333 REIYHTKRMQHIFQ--VK----YTMDSKYIVSGSDDGNVRLW 368
+ H + HI +K + S+YIVSGSD GN+ W
Sbjct: 552 GDYLHCYK-GHINSRTIKGVNFFGPRSEYIVSGSDCGNIFFW 592
>YIL046w [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 640
Score = 51.6 bits (122), Expect = 3e-06
Identities = 69/315 (21%), Positives = 127/315 (39%), Gaps = 48/315 (15%)
Query: 65 GHRDGVYTIAKNYNVLNKLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLS 124
GH DGV T+ NY +L T S D I W++ T + + H V L Y
Sbjct: 300 GHMDGVLTLQFNYRLL---FTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTL-----YFD 351
Query: 125 PQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQK 184
++ +++ DKT+++W+ + + I T+ G H+ L +
Sbjct: 352 DRK---LITGSLDKTIRVWNYITGE---------------CISTYRG-HSDSVLSVDSYQ 392
Query: 185 SNFVTGGAQ--IELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDL 242
V+G A +++W S+ L + +N V+ + S D ++ ++D+
Sbjct: 393 KVIVSGSADKTVKVWHVE-SRTCYTLRGHTEWVNCVKLHPKSFSCF-SCSDDTTIRMWDI 450
Query: 243 RTNSPTQ----KIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVF---K 295
RTNS + + Q + + VE N N + D M+
Sbjct: 451 RTNSCLKVFRGHVGQVQKIIPLTIKDVE--NLATDNTSDGSSPQDDPTMTDGADESDTPS 508
Query: 296 DHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHS--REIYHTKRMQHIFQVKYTMDS 353
+ V+D + P +++ D TI+++ VK G + H + + I D+
Sbjct: 509 NEQETVLDENI-PYPTHLLSCGLDNTIKLWDVKTGKCIRTQFGHVEGVWDI-----AADN 562
Query: 354 KYIVSGSDDGNVRLW 368
I+SGS DG++++W
Sbjct: 563 FRIISGSHDGSIKVW 577
>Hs4505895 [A] KOG0285 Pleiotropic regulator 1
Length = 514
Score = 51.6 bits (122), Expect = 3e-06
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 27/162 (16%)
Query: 85 TASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVKLWS 144
T S D IK W++++ + S H V G+ V+ R ++ SCG+DK VK W
Sbjct: 221 TGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVST------RSPYLFSCGEDKQVKCWD 274
Query: 145 VNSDDFSNVKDDTRLNTDEGIIKTFHGE-HAFQSLDHHRQKSNFVT--GGAQIELWDTNR 201
+ + +I+ +HG A LD H VT + +WD
Sbjct: 275 LEYNK---------------VIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRT 319
Query: 202 SKPISNLSWGADNINHVRFNQNEVDILASTGS-DNSVVLYDL 242
+ LS + + VR E I+ TGS D ++ L+DL
Sbjct: 320 KASVHTLSGHTNAVATVRCQAAEPQII--TGSHDTTIRLWDL 359
>Hs21071067 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 800
Score = 51.6 bits (122), Expect = 3e-06
Identities = 54/235 (22%), Positives = 99/235 (41%), Gaps = 32/235 (13%)
Query: 137 DKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFVTGGAQIEL 196
D TV++WSV +VK + L+ +I + + +D + G
Sbjct: 491 DSTVRVWSVTPKKLRSVKQASDLS----LIDKESDDVLERIMDEKTASELKILYG----- 541
Query: 197 WDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQTMR 256
S P+ S+ D + L S+ D +V L+ L+T + +V
Sbjct: 542 ----HSGPVYGASFSPDR-----------NYLLSSSEDGTVRLWSLQTFTC---LVGYKG 583
Query: 257 TNSICWNPVEA---FNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEV 313
N W+ + + FV D A + + + L +F H++ V F P + V
Sbjct: 584 HNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHY-QPLRIFAGHLADVNCTRFHPNSNYV 642
Query: 314 VTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSKYIVSGSDDGNVRLW 368
TGS D+T+R++ V +G+ I+ T I + ++ + +++ +G+ DG V LW
Sbjct: 643 ATGSADRTVRLWDVLNGNCVRIF-TGHKGPIHSLTFSPNGRFLATGATDGRVLLW 696
>At3g27640 [S] KOG0321 WD40 repeat-containing protein L2DTL
Length = 516
Score = 51.6 bits (122), Expect = 3e-06
Identities = 62/278 (22%), Positives = 112/278 (39%), Gaps = 38/278 (13%)
Query: 83 LATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVKL 142
L TASGD IK W++ + H G V +C P+ + ++S D L
Sbjct: 124 LLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPT-----NSDLLVSGSRDGCFAL 178
Query: 143 WSVNSDDFSNVKDDTRLNTDEGIIKTFH-------------GEHAFQSLDHHRQKSNFVT 189
W + S+ K++ +N+ G++K H + S+ + + + T
Sbjct: 179 WDLRCKSSSH-KEEFCINS-TGMVKGAHLSPLSKRIRRRKAASSSITSVLYVKDEITIAT 236
Query: 190 GGA---QIELWDTNRSK-PISNLSWGADNINHVRFNQNEVDILASTGS---------DNS 236
GA ++ WD + K P + S +D N + + L+ S DN
Sbjct: 237 AGAPDSALKFWDIRKLKAPFAQASPQSDPTNTKEKRSHGIVSLSQDSSGTYLTASCKDNR 296
Query: 237 VVLYD-LRTNSPTQKIVQTMRTNSICWNPV---EAFNFVIANEDHNAYYYDMRNMSKALH 292
+ LY+ LR + + R +S + + + + D NAY + +
Sbjct: 297 IYLYNTLRLDKGPVQSFSGCRIDSFFVRTMISPDGEYVLSGSSDGNAYIWQVNKPQVDPI 356
Query: 293 VFKDHVSAVMDVDFSPTG-DEVVTGSYDKTIRIYQVKH 329
+ K H V VD+SP+ +V T S D T+R++ +++
Sbjct: 357 ILKGHDFEVTAVDWSPSEIGKVATASDDFTVRLWNIEN 394
>At1g52730 [I] KOG0278 Serine/threonine kinase receptor-associated protein
Length = 381
Score = 51.6 bits (122), Expect = 3e-06
Identities = 79/376 (21%), Positives = 138/376 (36%), Gaps = 85/376 (22%)
Query: 68 DGVYTIA--KNYNVLNKLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSP 125
DG + I+ K Y+ L+ L D N T + + +F+ H G V C+ + L
Sbjct: 30 DGFFLISASKEYSCLDGL-----DSHPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRA 84
Query: 126 QRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKS 185
S D + KLW + D ++ +F +H ++
Sbjct: 85 A------SASADFSAKLWDALTGD---------------VLHSFEHKHIVRACAFSEDTK 123
Query: 186 NFVTGGAQ--IELWDTNR-SKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDL 242
+ +TGG + + ++D NR P + + +I + + ++ IL+S V L+D+
Sbjct: 124 SLLTGGFEKILRVFDMNRLDAPPTEVDKSPGSIRTLTWLHSDQTILSSCTDIGGVRLWDV 183
Query: 243 RTNSPTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVM 302
R+ KIVQT+ T S PV + A + Y + S +H V
Sbjct: 184 RSG----KIVQTLETKS----PVTS-----AEVSQDGRYITTADGSTVKFWDANHFGLVK 230
Query: 303 DVDFS----------PTGDEVVTGSYDKTIRIYQVKHGH--------------------- 331
D +G++ V G D +R++ G
Sbjct: 231 SYDMPCNIESASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIVKFQIASSLIGVSDSVINS 290
Query: 332 -----SREIYHTKRMQH---IFQVKYTMDSKYIVSGSDDGNVRLWRAKAW--ERSNAKST 381
+R + H H + V++T SGS+DG +R+W+ E + S
Sbjct: 291 MSEELNRSLKHGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIWQTTPANPEENETSSR 350
Query: 382 REKNKLEYDEKLKERF 397
R K+ ++ K E F
Sbjct: 351 RVKHSVDEVSKKIEGF 366
>SPAC18B11.10 [R] KOG0266 WD40 repeat-containing protein
Length = 614
Score = 51.2 bits (121), Expect = 3e-06
Identities = 43/191 (22%), Positives = 85/191 (43%), Gaps = 15/191 (7%)
Query: 189 TGGAQIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPT 248
T QI+LWD + K S +I + F+ N I++ +G D + L+D+ T
Sbjct: 379 TEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSG-DRTARLWDVETGQCI 437
Query: 249 QKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSP 308
K+ +I +P + F + + D + + + + H +V + FSP
Sbjct: 438 LKLEIENGVTAIAISPNDQF-IAVGSLDQIIRVWSVSGT--LVERLEGHKESVYSIAFSP 494
Query: 309 TGDEVVTGSYDKTIRIYQVKHGHS-----------REIYHTKRMQHIFQVKYTMDSKYIV 357
+++GS DKTI++++++ S + +T + V + DS++ +
Sbjct: 495 DSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGL 554
Query: 358 SGSDDGNVRLW 368
SGS D +++ W
Sbjct: 555 SGSKDRSMQFW 565
>ECU03g0430 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 414
Score = 51.2 bits (121), Expect = 3e-06
Identities = 63/291 (21%), Positives = 121/291 (40%), Gaps = 46/291 (15%)
Query: 83 LATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVKL 142
+ T GD +++W+ TR + K H V L ++P ++ S D +V L
Sbjct: 126 IVTGGGDSTVRFWDPMTRTQSKVVKRHDHWVQSLDISPD------GKWIASGALDGSVNL 179
Query: 143 WSVNSDDFSNVKDDTRLNTDEGIIKTFHGEH-AFQSLDHHRQKSNFVTGGAQ--IELWDT 199
+S +D I++F G +L HR N VTG + +W
Sbjct: 180 YS----------------SDGEYIRSFPGHRKGIVALAFHR--GNLVTGSRDNSVVVWSL 221
Query: 200 NRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQTMRTNS 259
N +S + V + D +AS D + +Y + + +R +S
Sbjct: 222 NGEVLLSYA-----HTMPVTCICSGEDYMASGSKDGRIKVYK------NLRFAEELRGHS 270
Query: 260 ICWNPVEAF-NFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSY 318
N ++ N++++ D ALH H + V+ V SP V +GS+
Sbjct: 271 SGINAIDCNGNYMVSGCDGGDVIVWK---GFALHKRMKHSAEVISVSISPNKLYVASGSF 327
Query: 319 DKTIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSKYIVSGSDDGNVRLWR 369
DK+++++ + G +++ + M ++++K M + +VS S D ++++R
Sbjct: 328 DKSVKLWSMDSG--QQLSSFRHMDLVYKIK--MMNDLVVSCSKDKTIKMFR 374
>CE06090 [T] KOG0279 G protein beta subunit-like protein
Length = 325
Score = 51.2 bits (121), Expect = 3e-06
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 297 HVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSRE--IYHTKRMQHIFQVKYTMDSK 354
H V DV S G ++GS+DKT+R++ + G S I HTK + V ++ D++
Sbjct: 68 HNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTK---DVLSVAFSADNR 124
Query: 355 YIVSGSDDGNVRLWRAKA 372
IVSGS D +++LW A
Sbjct: 125 QIVSGSRDKSIKLWNTLA 142
>SPAP17D4.01 [U] KOG0277 Peroxisomal targeting signal type 2 receptor
Length = 297
Score = 50.8 bits (120), Expect = 4e-06
Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 7/189 (3%)
Query: 188 VTGG--AQIELWDTNRSKPISNLSWGADN-INHVRFNQNEVDILASTGSDNSVVLYDLRT 244
VTG I+LW N + L+ G+++ I V + + ++L T SD +D R+
Sbjct: 109 VTGSWDGTIKLWLGNLPNSVQTLNNGSNSRILTVATHYSSPNLLGYTSSDGLCKFWDFRS 168
Query: 245 NSPTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDV 304
+ I + + W+ A+ ++ Y YD+ N+ L V H AV +
Sbjct: 169 SDKFMSIEIPNQITCMNWSKSNHRMVYTADNNNLVYCYDIANLKTPLSVLSGHQLAVRSI 228
Query: 305 DFSPTG-DEVVTGSYDKTIRIYQ-VKHGHSREI-YHTKRMQHIFQVKYTMDSKYIVSGSD 361
S + D + T SYD T RI+ +H R++ H++ ++ + + D +I S
Sbjct: 229 KSSNSAHDLLATASYDMTSRIFDPEQHSCIRKVDLHSEFVRDVDWSDFG-DGSWIASVGW 287
Query: 362 DGNVRLWRA 370
D ++ +W A
Sbjct: 288 DESLYIWNA 296
>Hs4885105 [BL] KOG1009 Chromatin assembly complex 1 subunit B/CAC2 (contains
WD40 repeats)
Length = 559
Score = 50.8 bits (120), Expect = 4e-06
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 25/146 (17%)
Query: 205 ISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKI------------- 251
+SNL+ +N VRF+ +ILAS G D ++L+ + N ++I
Sbjct: 59 LSNLARHTKAVNVVRFSPTG-EILASGGDDAVILLWKVNDNKEPEQIAFQDEDEAQLNKE 117
Query: 252 ----VQTMRTN-----SICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVM 302
V+T+R + ICW + A+ D+ A +D+ K + +F +H S V
Sbjct: 118 NWTVVKTLRGHLEDVYDICW-ATDGNLMASASVDNTAIIWDVSKGQK-ISIFNEHKSYVQ 175
Query: 303 DVDFSPTGDEVVTGSYDKTIRIYQVK 328
V + P G V T S D+ +R+Y ++
Sbjct: 176 GVTWDPLGQYVATLSCDRVLRVYSIQ 201
>CE06118 [D] KOG0642 Cell-cycle nuclear protein contains WD-40 repeats
Length = 638
Score = 50.8 bits (120), Expect = 4e-06
Identities = 64/263 (24%), Positives = 108/263 (40%), Gaps = 41/263 (15%)
Query: 83 LATASGDGVIKYWNMSTR------------EELSSFKAHYGMVTGLCVTPSYLSPQRENF 130
L TAS DG+IK WN+ + E + +F+ H G V L ++P+ +
Sbjct: 374 LFTASEDGLIKLWNLDQKKDEKHNSGGTELEPVYTFRGHKGPVLCLVLSPT------GDH 427
Query: 131 MLSCGDDKTVKLWSV---NSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNF 187
+ + G D + ++V N D F + D R+ T+ T H + A S+ +H S
Sbjct: 428 LYTGGIDGNICCFNVPSSNGDPFDSY--DPRVLTE---TLTGHTD-AIWSVAYHSSNSRL 481
Query: 188 VTGGAQ--IELWDTNRSKPISNLSWGADNI----NHVRFNQNEVDILASTGSDNSVVLYD 241
V+ + + LW+ +P+ + GA V F E L + ++ + D
Sbjct: 482 VSASSDSTVRLWEPGNGEPLIR-TIGAPKSGILPTSVDFVSTETSHLLAAYTNCYAQIID 540
Query: 242 LRTNSPTQ-----KIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKD 296
+ T S + + N I +P +I ED Y+D N S +H
Sbjct: 541 IDTGSTVMVFDFGAVTGSPTMNKIVSHPTMPLT-LIGGEDRTIRYFDNTNGS-IIHEAIA 598
Query: 297 HVSAVMDVDFSPTGDEVVTGSYD 319
HV V + P G +++GS+D
Sbjct: 599 HVEGVSSLAIDPNGLYLLSGSHD 621
>At5g60940 [A] KOG0640 mRNA cleavage stimulating factor complex; subunit 1
Length = 429
Score = 50.8 bits (120), Expect = 4e-06
Identities = 61/244 (25%), Positives = 97/244 (39%), Gaps = 35/244 (14%)
Query: 156 DTRLNTDEGIIKTFHGEHAFQSLDHHRQKSN----------FVTGGAQIEL--------- 196
D +N +G KT +H ++L H+ F TGGA +
Sbjct: 98 DFSVNHAKGSSKTIP-KHESKTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVK 156
Query: 197 ----WDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQ--K 250
DT I A+ IN + F+ IL S+ DN + +D + + K
Sbjct: 157 QMISGDTQARPLIRTFYDHAEPINDLDFHPRST-ILISSAKDNCIKFFDFSKTTAKRAFK 215
Query: 251 IVQ-TMRTNSICWNPVEAFNFVIANEDHNA-YYYDMRNMSKALHV-FKDH--VSAVMDVD 305
+ Q T SI ++P + F++A DH + YD+ L F D A+ V
Sbjct: 216 VFQDTHNVRSISFHP--SGEFLLAGTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVR 273
Query: 306 FSPTGDEVVTGSYDKTIRIYQ-VKHGHSREIYHTKRMQHIFQVKYTMDSKYIVSGSDDGN 364
+S TG +T S D IR++ V R I + + +T D ++++S D
Sbjct: 274 YSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDST 333
Query: 365 VRLW 368
V+LW
Sbjct: 334 VKLW 337
>7292737 [A] KOG0285 Pleiotropic regulator 1
Length = 482
Score = 50.8 bits (120), Expect = 4e-06
Identities = 62/302 (20%), Positives = 110/302 (35%), Gaps = 74/302 (24%)
Query: 84 ATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVKLW 143
AT +GD VIK W++++ + S H V G+ V+ + ++ SCG+D+ VK W
Sbjct: 188 ATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVS------TKHPYLFSCGEDRQVKCW 241
Query: 144 SVNSDDFSNVKDDTRLNTDEGIIKTFHGE-HAFQSLDHHRQKSNFVTGG--AQIELWDTN 200
+ + +I+ +HG A SL H T G + +WD
Sbjct: 242 DLEYNK---------------VIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIWDMR 286
Query: 201 RSKPISNLSWGADNINHVRFNQNEVDILASTGS-DNSVVLYDLRTNS------------- 246
+ L+ + + V I+ TGS D++V L+DL
Sbjct: 287 TKANVHTLTGHTNTVASVVAQATNPQII--TGSHDSTVRLWDLAAGKSVCTLTNHKKSVR 344
Query: 247 ------------------------PTQKIVQTMRTNSICWNPVEAFN---FVIANEDHNA 279
P K VQ + ++ N + A + V ++
Sbjct: 345 SIVLHPSLYMFASASPDNIKQWRCPEGKFVQNISGHTSIVNCMAANSEGVLVSGGDNGTM 404
Query: 280 YYYDMRN-------MSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHS 332
+++D R + D + + + F +G ++T DKTI++Y+ S
Sbjct: 405 FFWDWRTGYNFQRFQAPVQPGSMDSEAGIFAMCFDQSGSRLITAEADKTIKVYKEDDEAS 464
Query: 333 RE 334
E
Sbjct: 465 EE 466
>Hs7706657 [S] KOG0282 mRNA splicing factor
Length = 579
Score = 50.4 bits (119), Expect = 6e-06
Identities = 52/255 (20%), Positives = 109/255 (42%), Gaps = 24/255 (9%)
Query: 123 LSPQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEH-AFQSLDHH 181
L P + +LSC D +KLW V + ++TF G A + + +
Sbjct: 296 LFPLSGHLLLSCSMDCKIKLWEVYGE--------------RRCLRTFIGHSKAVRDICFN 341
Query: 182 RQKSNFVTGGAQ--IELWDTNRSKPISNLSWGADNINHVRFNQNE--VDILASTGSDNSV 237
+ F++ ++LWDT + IS + V+FN +E ++ + SD +
Sbjct: 342 TAGTQFLSAAYDRYLKLWDTETGQCISRFT-NRKVPYCVKFNPDEDKQNLFVAGMSDKKI 400
Query: 238 VLYDLRTNSPTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDH 297
V +D+R+ Q+ + + + E FV ++D + ++ ++ +
Sbjct: 401 VQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPS 460
Query: 298 VSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHG---HSREIYHTKRMQ-HIFQVKYTMDS 353
+ ++ V SP G + S D I I+ ++ + ++I+ + + QV ++ D
Sbjct: 461 MHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDM 520
Query: 354 KYIVSGSDDGNVRLW 368
Y++SG +G + +W
Sbjct: 521 SYVISGDGNGKLNIW 535
>At5g54520 [S] KOG0282 mRNA splicing factor
Length = 404
Score = 50.4 bits (119), Expect = 6e-06
Identities = 65/280 (23%), Positives = 118/280 (41%), Gaps = 37/280 (13%)
Query: 65 GHRDGVYTIAKNYNVLNKLATASGDGVIKYWNM--STREELSSFKAHYGMVTGLCVTPSY 122
GH V I + + ++ LA+A DG + WN+ + ++++ +F H V + +
Sbjct: 105 GHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKKKVRAFLHHNAPVKDVKWSKQG 164
Query: 123 LSPQRENFMLSCGDDKTVKLWSVNSD-DFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHH 181
LS +LSCG D T +L+ V + + K+D + G++K FH ++
Sbjct: 165 LS------LLSCGYDCTSRLFDVERGVETQSFKEDEVV----GVVK-FHPDNC------- 206
Query: 182 RQKSNFVTGGAQ--IELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTG------S 233
+ F++GG++ + LWD +K + I V F ++S+ S
Sbjct: 207 ---NVFLSGGSKGSLRLWDIRANKFVHEYVRDLGPILDVEFIAGGKQFISSSDVSGRNIS 263
Query: 234 DNSVVLYDLRTNSPTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHV 293
+N+V+++D+ P V C IA N N L+
Sbjct: 264 ENAVIVWDISREVPLSNQVYVEAYTCPCIKRHPQDPVFIAQSHGNYTAIFSTNPPFKLNK 323
Query: 294 FK---DHVSAVMDV--DFSPTGDEVVTGSYDKTIRIYQVK 328
+K H A + +FSP G+ + +GS D ++ +Y K
Sbjct: 324 YKRFEGHWVAGFPIKCNFSPDGETLASGSSDGSVYMYDYK 363
>7302218 [R] KOG0302 Ribosome Assembly protein
Length = 422
Score = 50.4 bits (119), Expect = 6e-06
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 19/144 (13%)
Query: 124 SPQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHA--FQSLDHH 181
SP + + SC DKT+++W D R + + + T H + +
Sbjct: 244 SPNERSVLASCSVDKTIRIW------------DCRASPQKACMLTCEDAHQSDVNVISWN 291
Query: 182 RQKSNFVTGG--AQIELWDTNR---SKPISNLSWGADNINHVRFNQNEVDILASTGSDNS 236
R + +GG + +WD + KPI+ D+I V ++ E +LAS G D+
Sbjct: 292 RNEPFIASGGDDGYLHIWDLRQFQSKKPIATFKHHTDHITTVEWSPAEATVLASGGDDDQ 351
Query: 237 VVLYDLRTNSPTQKIVQTMRTNSI 260
+ L+DL + V + +
Sbjct: 352 IALWDLAVEKDIDQAVDPAQNEDV 375
>7299974 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 430
Score = 50.4 bits (119), Expect = 6e-06
Identities = 45/224 (20%), Positives = 87/224 (38%), Gaps = 25/224 (11%)
Query: 124 SPQRENFMLSCGDDKTVKLWSVNSDDFSN-VKDDTRLNTDEGIIKTFHGEHAFQSLDHHR 182
+P ++LS DD T+ LW +N+ + V D + T + H H
Sbjct: 190 NPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLL-----HE 244
Query: 183 QKSNFVTGGAQIELWDT---NRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVL 239
V ++ +WDT N SKP + +N + FN ILA+ +D +V L
Sbjct: 245 SLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 304
Query: 240 YDLRTNSPTQKIVQTMRTN--SICWNPVEAFNFVIANEDHNAYYYDMRNMS--------- 288
+DLR ++ + + W+P + D + +D+ +
Sbjct: 305 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAE 364
Query: 289 ----KALHVFKDHVSAVMDVDFSPTGDEVVTG-SYDKTIRIYQV 327
+ L + H + + D ++P ++ S D ++++Q+
Sbjct: 365 DGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQM 408
>SPBC1198.12 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and Ama1
subunits
Length = 421
Score = 50.1 bits (118), Expect = 7e-06
Identities = 53/261 (20%), Positives = 102/261 (38%), Gaps = 33/261 (12%)
Query: 82 KLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVK 141
+LA + GVI W++ + + + S K H V L +N + S G D+ +
Sbjct: 180 QLAVGTDSGVIYIWDIESTKSVRSLKGHSERVAALA--------WNDNTLTSGGKDEVI- 230
Query: 142 LWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFVTGGAQIEL--WDT 199
+ D R + H E L R +GG L WD
Sbjct: 231 -----------LHHDLRAPGCCAEMMKVH-EQEICGLQWDRSLGQLASGGNDNNLFVWDY 278
Query: 200 NRSKPISNLSWGADNINHVRFNQNEVDILASTGS--DNSVVLYDLRTNSPTQKIVQTMRT 257
S+P+ + + ++ ++ ILAS G D + +++ T K+ +
Sbjct: 279 RSSRPLHKFEEHTAAVKAIGWSPHQRGILASGGGTIDRCLTIHNTLTGRLQNKLDTGSQV 338
Query: 258 NSICW----NPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEV 313
++ W N + + N+ Y ++N++ H + V+ + SP G +
Sbjct: 339 CNMAWSKTSNEIVTTHGFAKNQVSLWKYPSLKNIAN----LTAHTNRVLYLSMSPDGQSI 394
Query: 314 VTGSYDKTIRIYQVKHGHSRE 334
VTG+ D+T+R +++ + +E
Sbjct: 395 VTGAGDETLRFWKLFNKKPKE 415
>Hs22057346 [R] KOG1334 WD40 repeat protein
Length = 779
Score = 50.1 bits (118), Expect = 7e-06
Identities = 47/165 (28%), Positives = 70/165 (41%), Gaps = 29/165 (17%)
Query: 230 STGSDNSVVLYDLRTNSPTQKIVQTMRTN------SICWNPVEAFNFVIANEDHNAYYYD 283
++G D V DLR + P K+V T + +I NP + F + +D YD
Sbjct: 484 TSGEDAVVFTIDLRQDRPASKVVVTRENDKKVGLYTITVNPANTYQFAVGGQDQFVRIYD 543
Query: 284 MRNMSK-----ALHVFKDHVSAVMDVDFSPTGDEVVTGSYDKT--------IRIYQVKHG 330
R + K L F H +++ DF PT V S+D T IY
Sbjct: 544 QRKIDKKENNGVLKKFTPH--HLVNCDF-PTNITCVVYSHDGTELLASYNDDDIYLFNSS 600
Query: 331 HSREIYHTKRM---QHIFQVK----YTMDSKYIVSGSDDGNVRLW 368
HS ++KR ++ VK Y S+++VSGSD G++ W
Sbjct: 601 HSDGAQYSKRFKGHRNNTTVKGVNFYGPRSEFVVSGSDCGHIFFW 645
>ECU07g0750 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 384
Score = 50.1 bits (118), Expect = 7e-06
Identities = 29/116 (25%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
Query: 215 INHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQTMRTN--SICWNPVEAFNFVI 272
+N F+ + +L+S G VVL+D R+ I + ++ S+ ++P++
Sbjct: 208 VNDCAFSFFDKKLLSSAGDGGMVVLWDTRSEDCIHAIEEAHTSDILSVRFSPLDGNVIAT 267
Query: 273 ANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVV-TGSYDKTIRIYQV 327
++ D + +D R++S+ LH+ H V+ V++SP D+V+ +GS D+ + ++ +
Sbjct: 268 SSCDGSVKVWDRRSLSQPLHILLGHSKDVVSVEWSPHNDKVLASGSTDRRVIVWDL 323
>CE02043 [R] KOG0289 mRNA splicing factor
Length = 509
Score = 50.1 bits (118), Expect = 7e-06
Identities = 60/288 (20%), Positives = 116/288 (39%), Gaps = 27/288 (9%)
Query: 42 TKALNATKLERMFAKPFVGQLGYGHRDGVYTIAKNYNVLNKLATASGDGVIKYWNMSTRE 101
T ++ T + + K V Q GH + + + + + ++ AS D I+ W+ +
Sbjct: 243 TGGIDKTVVLYDYEKEQVMQTFKGHNKKINAVVLHPDNITAIS-ASADSHIRVWSATDSS 301
Query: 102 ELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVKLWSVNSDDFSNVKDDTRLNT 161
+ H VT + + S +++LS DD W+ + D + K +++
Sbjct: 302 SKAIIDVHQAPVTDISLNAS------GDYILSASDDS---YWAFS--DIRSGKSLCKVSV 350
Query: 162 DEGIIKTFHGEHAFQSLDHHRQKSNFVTGGAQ--IELWDTNRSKPISNLSWGADNINHVR 219
+ G + A S++ H F TG A +++WD + + +
Sbjct: 351 EPG------SQIAVHSIEFHPDGLIFGTGAADAVVKIWDLKNQTVAAAFPGHTAAVRSIA 404
Query: 220 FNQNEVDILASTGSDNSVVLYDLRT--NSPTQKIVQTMRTNSICWNPVEAFNFVIANEDH 277
F++N LA+ D V L+DLR N T + NS+ ++ F +
Sbjct: 405 FSENGY-YLATGSEDGEVKLWDLRKLKNLKTFANEEKQPINSLSFDMTGTF---LGIGGQ 460
Query: 278 NAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYDKTIRIY 325
+++ S+ + + DH V V F +VT S DK++R++
Sbjct: 461 KVQVLHVKSWSEVVSL-SDHSGPVTGVRFGENARSLVTCSLDKSLRVF 507
>CE00901 [R] KOG0266 WD40 repeat-containing protein
Length = 376
Score = 50.1 bits (118), Expect = 7e-06
Identities = 33/111 (29%), Positives = 55/111 (48%), Gaps = 3/111 (2%)
Query: 258 NSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEVVTGS 317
N I W+ ++ V A++D +++ S+ K H + V +F+P VV+GS
Sbjct: 133 NDIAWSS-DSRCVVSASDDKTLKIFEIVT-SRMTKTLKGHNNYVFCCNFNPQSSLVVSGS 190
Query: 318 YDKTIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSKYIVSGSDDGNVRLW 368
+D+++RI+ VK G + + V + D I SGS DG VR+W
Sbjct: 191 FDESVRIWDVKTGMCIKTL-PAHSDPVSAVSFNRDGSLIASGSYDGLVRIW 240
>At5g05970 [T] KOG4378 Nuclear protein COP1
Length = 787
Score = 50.1 bits (118), Expect = 7e-06
Identities = 56/295 (18%), Positives = 110/295 (36%), Gaps = 22/295 (7%)
Query: 82 KLATASGDGVIKYWNMSTREELSSFKAHYGMVTGLCVTPSYLSPQRENFMLSCGDDKTVK 141
+L ASG +K +++S + Y G C S + S G+DK +
Sbjct: 11 RLLAASGGDTVKLFDVSA-DSGDPCVLSYTPSPG-CAVNSVKWNHTNLVVASTGEDKKIS 68
Query: 142 LWSVNSDDFSNVKDDTRLNTDEGIIKTFHGEHAFQSLDHHRQKSNFVTGGAQ---IELWD 198
LW N V + D E ++ ++ S ++ G +++WD
Sbjct: 69 LWRKNGQSLGTVPVTGKDGGDSA-------EECLSAISFSKKGSRYICSGGTGQIVKIWD 121
Query: 199 TNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNS-------PTQKI 251
R I L I V +N + + LAS +++++L + + P ++
Sbjct: 122 LQRKLCIKKLKGHTSTITGVMYNCKD-EHLASVSVGGDLIVHNLASGARATELKDPNGQV 180
Query: 252 VQTMRTNSIC-WNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTG 310
VQ + + ++ V A +D + +D S + K H + V FSP+
Sbjct: 181 VQFVHVLRLLDYSRSSRHLLVTAGDDGTVHLWDTTGRSPKMSWLKQHSAPTAGVCFSPSN 240
Query: 311 DEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVKYTMDSKYIVSGSDDGNV 365
++++ S ++Y G R + + + +V+G+ +G V
Sbjct: 241 EKII-ASVGMDKKLYTYDSGSRRSSSCIAYEAPFSSLAFGDNGYILVAGTSNGRV 294
>At3g63460 [U] KOG0307 Vesicle coat complex COPII subunit SEC31
Length = 1097
Score = 50.1 bits (118), Expect = 7e-06
Identities = 36/149 (24%), Positives = 70/149 (46%), Gaps = 15/149 (10%)
Query: 176 QSLDHHRQKSNFVTGGA---QIELWDTNRSKPISNL-------SWGADNINHVRFNQNEV 225
+ L+ + SN + GA +I +WD + S+ S I+ + +N+
Sbjct: 126 RGLEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQGEISFISWNRKVQ 185
Query: 226 DILASTGSDNSVVLYDLRTNSPTQKIVQTM--RTNSICWNPVEAFNFVIANEDHNA---Y 280
ILAST + + V++DLR P ++ R + + WNP ++A++D ++
Sbjct: 186 QILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPNVTTQIMVASDDDSSPTLK 245
Query: 281 YYDMRNMSKALHVFKDHVSAVMDVDFSPT 309
+DMRN+ + F H V+ +++ P+
Sbjct: 246 LWDMRNIMSPVREFTGHQRGVIAMEWCPS 274
>At1g11160 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 974
Score = 50.1 bits (118), Expect = 7e-06
Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 7/172 (4%)
Query: 194 IELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLYDLRTNSPTQKIVQ 253
I+LWD SK + + N + V F+ + LAS SD ++ ++D R Q
Sbjct: 31 IKLWDLEESKMVRAFTGHRSNCSAVEFHPFG-EFLASGSSDTNLRVWDTRKKGCIQTYKG 89
Query: 254 TMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSKALHVFKDHVSAVMDVDFSPTGDEV 313
R S + V D+ +D+ K LH FK H + +DF P +
Sbjct: 90 HTRGISTIEFSPDGRWVVSGGLDNVVKVWDL-TAGKLLHEFKCHEGPIRSLDFHPLEFLL 148
Query: 314 VTGSYDKTIRIYQVKHGHSREIYHTKRMQ--HIFQVKYTMDSKYIVSGSDDG 363
TGS D+T++ + ++ + E+ T R + + + + D + + G DDG
Sbjct: 149 ATGSADRTVKFWDLE---TFELIGTTRPEATGVRAIAFHPDGQTLFCGLDDG 197
>7299285 [R] KOG4155 FOG: WD40 repeat
Length = 331
Score = 50.1 bits (118), Expect = 7e-06
Identities = 68/279 (24%), Positives = 110/279 (39%), Gaps = 46/279 (16%)
Query: 83 LATASGDGVIKYWNMSTREELS---SFKAH-YGMVT------GLCVTPSYLSPQRENFML 132
L T D ++K W++ L K H G+V+ G + S L +
Sbjct: 55 LVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLWDA 114
Query: 133 SCGDDK------TVKLWSVNSDDFSNVKDDTRLNTDEGIIKTFHGE--HAFQSLDHHRQK 184
GD K V LW+V FS ++G I + E A Q+LD K
Sbjct: 115 RSGDKKHLLSFGPVDLWTVQ---FSPCNKYVISGLNDGKISMYSVETGKAEQTLDAQNGK 171
Query: 185 ----------SNFVTGGAQ---IELWDTNRSKPISNLSWGADNINHVRFNQNEVDILAST 231
++ GA I ++D K + L A + + F+ N +L +
Sbjct: 172 YTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNS-QLLLTA 230
Query: 232 GSDNSVVLYDLRTNSPTQKIVQTMRTNSICWNPVEAFN-----FVIANEDHNAYYYDMRN 286
D + LYD+ + +V T+ ++ W AF+ F ++ D++ +D
Sbjct: 231 SDDGHMKLYDVTHSD----VVGTLSGHA-SWVLCVAFSEDGKHFASSSSDNSVKIWDTSE 285
Query: 287 MSKALHVFKDHVSAVMDVDFSPTGDEVVTGSYDKTIRIY 325
K LH F +H V V +SP D+V + S DK++ IY
Sbjct: 286 R-KCLHTFAEHTDQVWGVRYSPGNDKVASASEDKSLNIY 323
>Hs21071065 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 745
Score = 49.7 bits (117), Expect = 1e-05
Identities = 24/78 (30%), Positives = 44/78 (55%), Gaps = 1/78 (1%)
Query: 291 LHVFKDHVSAVMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQHIFQVKYT 350
L +F H++ V F P + V TGS D+T+R++ V +G+ I+ T I + ++
Sbjct: 565 LRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIF-TGHKGPIHSLTFS 623
Query: 351 MDSKYIVSGSDDGNVRLW 368
+ +++ +G+ DG V LW
Sbjct: 624 PNGRFLATGATDGRVLLW 641
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.132 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,807,539
Number of Sequences: 60738
Number of extensions: 1212751
Number of successful extensions: 8282
Number of sequences better than 1.0e-05: 151
Number of HSP's better than 0.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 153
Number of HSP's that attempted gapping in prelim test: 7028
Number of HSP's gapped (non-prelim): 725
length of query: 478
length of database: 30,389,216
effective HSP length: 110
effective length of query: 368
effective length of database: 23,708,036
effective search space: 8724557248
effective search space used: 8724557248
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)