ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI4326 good PD KOG0672 Cell cycle control, cell division, chromosome partitioning Halotolerance protein HAL3 (contains flavoprotein domain)
r_klactVI4326 good PD KOG0672 Inorganic ion transport and metabolism Halotolerance protein HAL3 (contains flavoprotein domain)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI4326 1508141 1506195 -649
(649 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YOR054c [PD] KOG0672 Halotolerance protein HAL3 (contains flavop... 409 e-114
YKR072c [PD] KOG0672 Halotolerance protein HAL3 (contains flavop... 359 8e-99
YKL088w [PD] KOG0672 Halotolerance protein HAL3 (contains flavop... 132 2e-30
At3g18030 [PD] KOG0672 Halotolerance protein HAL3 (contains flav... 131 4e-30
At1g48610 [PD] KOG0672 Halotolerance protein HAL3 (contains flav... 130 8e-30
SPAC15E1.04_1 [PD] KOG0672 Halotolerance protein HAL3 (contains ... 125 2e-28
Hs21361900 [PD] KOG0672 Halotolerance protein HAL3 (contains fla... 120 5e-27
CE09663 [PD] KOG0672 Halotolerance protein HAL3 (contains flavop... 116 9e-26
HsM11141897 [PD] KOG0672 Halotolerance protein HAL3 (contains fl... 108 2e-23
>YOR054c [PD] KOG0672 Halotolerance protein HAL3 (contains flavoprotein
domain)
Length = 674
Score = 409 bits (1052), Expect = e-114
Identities = 255/564 (45%), Positives = 315/564 (55%), Gaps = 55/564 (9%)
Query: 33 NSTGSAVGSSASQTTSPVNKPASPSVSITKSIMNASGTSGAVVSNTPASGLKRVPTVTFT 92
NSTG S +S T V K SP+ S TKSIMNASGTSGAVVSNTP GLKR+PTVTF+
Sbjct: 36 NSTGP-FSSVSSLDTPVVRKSTSPTGSQTKSIMNASGTSGAVVSNTPEPGLKRIPTVTFS 94
Query: 93 DAKHAVLKXXXXXXXXXXXXXXXXXXXKVASPVVSDKAGSPPPVELTTSVKQPTAGTAIE 152
D K L+ + + ++ A ++ + K P G A
Sbjct: 95 DPKLGSLRSDVEQTPPNQVARQSSEKKATSVHIAAEGANQGRNLK-DINTKVPKDGEASA 153
Query: 153 QRIQSPLSKSQEDLRVRKAPANVHKTSAVEQTAGGAETEPKTPLEATIQEGVEGINLGSQ 212
+P TS + G + + G + I L S
Sbjct: 154 SSFSTP-------------------TSILSNADMGNNISSLLAKKLSFTGGTDSI-LNSD 193
Query: 213 AETSKPQEEQHPHFVVNDELHXXXXXXXXXXXXXXXMPNGSQTNAAPTFKLNETTIPEDE 272
+ P++E HPHF V D LH P+ P E +I +
Sbjct: 194 NSSDSPRKE-HPHFYVEDPLHTPSVRSRSNSTSPR--PSVVVNTFNPINIEREGSISKTG 250
Query: 273 QVIASEPPVEIAQ---IVAPNIPKREAAKNVDPRLPQDDGKLHILFGATGSLSVLKIKSM 329
+ E +E A V+ + + N+DPRLPQDDGKLH+LFGATGSLSV K+K M
Sbjct: 251 EPTLLESVLEEAMSPNAVSNPLKRENIMTNMDPRLPQDDGKLHVLFGATGSLSVFKLKHM 310
Query: 330 IKKLEEIYGRDRVSIQVILTQAAAQFFANRTLNRKK-----------------GSISGQS 372
I+KLEEIYGRD++ IQVILT +A +FFA + + + K G+I+G
Sbjct: 311 IRKLEEIYGRDKICIQVILTNSATKFFAMKYMRKNKKQHNSIDTSFNSTNSNAGNITGNK 370
Query: 373 HTQGQTQV--AQTPSVSSPLSQ-------EPTVASTDIPSNTVPIGQETKSTDGNTISTA 423
+ Q S +S SQ E +AST +T+ G T S N +S
Sbjct: 371 KKVASLEKFSIQKTSSNSAASQTNNKQEEEKQMASTTGFPSTLG-GSRTYSNSSNVVSQH 429
Query: 424 AKIELPPHIQVWLDQDEWDAWKQRTDPVLHIELRRWADILVVAPLTANTLSKIALGLCDN 483
+IELP HIQ W DQDEWD W+QRTDPVLHIELRRWADILVVAPLTANTL+KIALGLCDN
Sbjct: 430 PQIELPAHIQFWTDQDEWDVWRQRTDPVLHIELRRWADILVVAPLTANTLAKIALGLCDN 489
Query: 484 LLTSVIRAWNPLFPIFLAPSMVSNSYNSSITKRHLNMIKEEMPWITVFKPSEKVVGIYGD 543
LLTSVIRAWNP FPIFLAPSM S ++NS +TK+H +I+EEMPW+TVFKPSEKV+GI GD
Sbjct: 490 LLTSVIRAWNPTFPIFLAPSMGSGTFNSIMTKKHFRIIQEEMPWVTVFKPSEKVMGINGD 549
Query: 544 IGLGGMMDGNEIVDKVVMKLGGYP 567
IGL GMMD NEIV K+V+KLGGYP
Sbjct: 550 IGLSGMMDANEIVGKIVVKLGGYP 573
>YKR072c [PD] KOG0672 Halotolerance protein HAL3 (contains flavoprotein
domain)
Length = 562
Score = 359 bits (921), Expect = 8e-99
Identities = 193/291 (66%), Positives = 218/291 (74%), Gaps = 31/291 (10%)
Query: 278 EPPVEIAQIVAPNI-PKREAAKNVDPRLPQDDGKLHILFGATGSLSVLKIKSMIKKLEEI 336
E PV+ Q V P+I PKRE +KN+DPRLPQDDGKLH+LFGATGSLSV KIK MIKKLEEI
Sbjct: 232 ETPVK--QSVIPSIIPKRENSKNLDPRLPQDDGKLHVLFGATGSLSVFKIKPMIKKLEEI 289
Query: 337 YGRDRVSIQVILTQAAAQFFANRTLNRKKGSISGQSHTQGQTQVAQTPSVSSPLSQEPTV 396
YGRDR+SIQVILTQ+A QFF R K I +Q TP+ +P++ P
Sbjct: 290 YGRDRISIQVILTQSATQFFEQRYT---KKIIKSSEKLNKMSQYESTPA--TPVTPTP-- 342
Query: 397 ASTDIPSNTVPIGQETKSTDGNTISTAAKIELPPHIQVWLDQDEWDAWKQRTDPVLHIEL 456
GQ + A +ELPPHIQ+W DQDEWDAWKQRTDPVLHIEL
Sbjct: 343 ------------GQ---------CNMAQVVELPPHIQLWTDQDEWDAWKQRTDPVLHIEL 381
Query: 457 RRWADILVVAPLTANTLSKIALGLCDNLLTSVIRAWNPLFPIFLAPSMVSNSYNSSITKR 516
RRWADILVVAPLTANTLSKIALGLCDNLLTSVIRAWNP +PI LAPSMVS+++NS +TK+
Sbjct: 382 RRWADILVVAPLTANTLSKIALGLCDNLLTSVIRAWNPSYPILLAPSMVSSTFNSMMTKK 441
Query: 517 HLNMIKEEMPWITVFKPSEKVVGIYGDIGLGGMMDGNEIVDKVVMKLGGYP 567
L IKEEM W+TVFKPSEKV+ I GDIGLGGMMD NEIV+K+VMKLGGYP
Sbjct: 442 QLQTIKEEMSWVTVFKPSEKVMDINGDIGLGGMMDWNEIVNKIVMKLGGYP 492
Score = 62.4 bits (150), Expect = 2e-09
Identities = 34/54 (62%), Positives = 39/54 (71%), Gaps = 2/54 (3%)
Query: 42 SASQTTSPVNKPASPSVSITKSIMNASGTSGAVVSNTPASGLKRVPTVTFTDAK 95
S Q+ SP A+ + TKSIMNA+GTSGAVVSNTP GLKRVP VTF+D K
Sbjct: 50 SGRQSISPTLSNATTTT--TKSIMNATGTSGAVVSNTPEPGLKRVPAVTFSDLK 101
>YKL088w [PD] KOG0672 Halotolerance protein HAL3 (contains flavoprotein
domain)
Length = 571
Score = 132 bits (331), Expect = 2e-30
Identities = 64/141 (45%), Positives = 100/141 (70%), Gaps = 8/141 (5%)
Query: 426 IELPPHIQVWLDQDEW--DAWKQRTDP-----VLHIELRRWADILVVAPLTANTLSKIAL 478
+++ H+++W ++D W DA + +LH ELR+WADI ++APL+ANTL+K+A
Sbjct: 357 LKMSTHVKIWREEDAWVFDAVNKNDTSLSLNLILHHELRKWADIFLIAPLSANTLAKLAN 416
Query: 479 GLCDNLLTSVIRAWNPLFPIFLAPSMVSNSYNSSITKRHLNMIKEEMPWITVFKPSEKVV 538
G+C+NLLTSV+R W+PL P+ +AP+M + Y + +TK+HL + ++ P+I V KP EKV+
Sbjct: 417 GICNNLLTSVMRDWSPLTPVLIAPAMNTFMYINPMTKKHLTSLVQDYPFIQVLKPVEKVL 476
Query: 539 GIYGDIGLGGMMDGNEIVDKV 559
I GDIG+GGM + +IV+ V
Sbjct: 477 -ICGDIGMGGMREWTDIVEIV 496
Score = 56.6 bits (135), Expect = 1e-07
Identities = 28/61 (45%), Positives = 42/61 (67%), Gaps = 7/61 (11%)
Query: 302 PRLP-------QDDGKLHILFGATGSLSVLKIKSMIKKLEEIYGRDRVSIQVILTQAAAQ 354
PR+P +DD K HIL GATGS++ +K+ +I KL +IYG +++SIQ+I+T+ A
Sbjct: 293 PRVPFTEFFQKEDDKKFHILIGATGSVATIKVPLIIDKLFKIYGPEKISIQLIVTKPAEH 352
Query: 355 F 355
F
Sbjct: 353 F 353
>At3g18030 [PD] KOG0672 Halotolerance protein HAL3 (contains flavoprotein
domain)
Length = 209
Score = 131 bits (329), Expect = 4e-30
Identities = 67/135 (49%), Positives = 92/135 (67%), Gaps = 3/135 (2%)
Query: 425 KIELPPHIQVWLDQDEWDAWKQRTDPVLHIELRRWADILVVAPLTANTLSKIALGLCDNL 484
K+ LP + ++ D+DEW +W + DPVLHIELRRWAD+LV+APL+ANTL KIA GLCDNL
Sbjct: 62 KLSLPQEVTLYTDEDEWSSWNKIGDPVLHIELRRWADVLVIAPLSANTLGKIAGGLCDNL 121
Query: 485 LTSVIRAWNPLFPIFLAPSMVSNSYNSSITKRHLNMIKEEMPWITVFKPSEKVVGIYGDI 544
LT +IRAW+ P+F+AP+M + +N+ T+RHL + E IT+ P +K + GD
Sbjct: 122 LTCIIRAWDYTKPLFVAPAMNTLMWNNPFTERHLLSLDE--LGITLIPPIKKRLAC-GDY 178
Query: 545 GLGGMMDGNEIVDKV 559
G G M + + I V
Sbjct: 179 GNGAMAEPSLIYSTV 193
>At1g48610 [PD] KOG0672 Halotolerance protein HAL3 (contains flavoprotein
domain)
Length = 389
Score = 130 bits (326), Expect = 8e-30
Identities = 64/142 (45%), Positives = 98/142 (68%), Gaps = 3/142 (2%)
Query: 418 NTISTAAKIELPPHIQVWLDQDEWDAWKQRTDPVLHIELRRWADILVVAPLTANTLSKIA 477
++++ K LP ++ ++ D+DEW +W + DPVLHIELRRWAD++++APL+ANTL+KIA
Sbjct: 235 SSLNFVDKPSLPQNVTLYTDEDEWSSWNKIGDPVLHIELRRWADVMIIAPLSANTLAKIA 294
Query: 478 LGLCDNLLTSVIRAWNPLFPIFLAPSMVSNSYNSSITKRHLNMIKEEMPWITVFKPSEKV 537
GLCDNLLT ++RAW+ P+F+AP+M + +N+ T+RHL ++ E IT+ P +K
Sbjct: 295 GGLCDNLLTCIVRAWDYSKPLFVAPAMNTLMWNNPFTERHLVLLDE--LGITLIPPIKKK 352
Query: 538 VGIYGDIGLGGMMDGNEIVDKV 559
+ GD G G M + + I V
Sbjct: 353 LAC-GDYGNGAMAEPSLIYSTV 373
>SPAC15E1.04_1 [PD] KOG0672 Halotolerance protein HAL3 (contains flavoprotein
domain)
Length = 326
Score = 125 bits (314), Expect = 2e-28
Identities = 64/132 (48%), Positives = 87/132 (65%), Gaps = 1/132 (0%)
Query: 432 IQVWLDQDEWDAWKQRTDPVLHIELRRWADILVVAPLTANTLSKIALGLCDNLLTSVIRA 491
+ V+ + D+W W P+ HIELRRWA +L++APL+ANT++K+A GLCDNLLTS+IRA
Sbjct: 83 VNVYNNADDWKNWDGLECPITHIELRRWAHLLLIAPLSANTMAKMANGLCDNLLTSLIRA 142
Query: 492 WNPLFPIFLAPSMVSNSYNSSITKRHLNMIKEEMPWITVFKPSEKVVGIYGDIGLGGMMD 551
W PL PI LAP+M + + + IT+ HL+ I P EKV+ GDIG+GGM +
Sbjct: 143 WAPLKPILLAPAMNTLMWTNPITQEHLSAISRIYKNSEFIMPIEKVLAC-GDIGMGGMAE 201
Query: 552 GNEIVDKVVMKL 563
IV +V KL
Sbjct: 202 WRNIVGRVADKL 213
>Hs21361900 [PD] KOG0672 Halotolerance protein HAL3 (contains flavoprotein
domain)
Length = 204
Score = 120 bits (302), Expect = 5e-27
Identities = 60/128 (46%), Positives = 87/128 (67%), Gaps = 3/128 (2%)
Query: 432 IQVWLDQDEWDAWKQRTDPVLHIELRRWADILVVAPLTANTLSKIALGLCDNLLTSVIRA 491
+ ++ D DEW+ WK R+DPVLHI+LRRWAD+L+VAPL ANTL K+A G+CDNLLT V+RA
Sbjct: 67 VTLYSDADEWEMWKSRSDPVLHIDLRRWADLLLVAPLDANTLGKVASGICDNLLTCVMRA 126
Query: 492 WNPLFPIFLAPSMVSNSYNSSITKRHLNMIKEEMPWITVFKPSEKVVGIYGDIGLGGMMD 551
W+ P+ P+M + + IT + ++ +K ++ + ++K+V GD GLG M +
Sbjct: 127 WDRSKPLLFCPAMNTAMWEHPITAQQVDQLK-AFGYVEIPCVAKKLV--CGDEGLGAMAE 183
Query: 552 GNEIVDKV 559
IVDKV
Sbjct: 184 VGTIVDKV 191
>CE09663 [PD] KOG0672 Halotolerance protein HAL3 (contains flavoprotein
domain)
Length = 237
Score = 116 bits (291), Expect = 9e-26
Identities = 57/126 (45%), Positives = 86/126 (68%), Gaps = 2/126 (1%)
Query: 434 VWLDQDEWDAWKQRTDPVLHIELRRWADILVVAPLTANTLSKIALGLCDNLLTSVIRAWN 493
V+ D+DEW W++R D VLHIELR+WAD ++APL ANT++KIA GLCDNL+TS+IRAW+
Sbjct: 99 VYEDRDEWSMWRERGDKVLHIELRKWADSALIAPLDANTMAKIANGLCDNLVTSIIRAWD 158
Query: 494 PLFPIFLAPSMVSNSYNSSITKRHLNMIKEEMPWITVFKPSEKVVGIYGDIGLGGMMDGN 553
P + AP+M ++ + + +T +H ++K ++ + + P +K + I GD+G G M
Sbjct: 159 LSKPCYFAPAMNTHMWENPLTMQHRTVLKSQLKFKEIC-PIQKEL-ICGDVGTGAMASIG 216
Query: 554 EIVDKV 559
IV V
Sbjct: 217 TIVSLV 222
>HsM11141897 [PD] KOG0672 Halotolerance protein HAL3 (contains flavoprotein
domain)
Length = 127
Score = 108 bits (271), Expect = 2e-23
Identities = 56/116 (48%), Positives = 79/116 (67%), Gaps = 3/116 (2%)
Query: 444 WKQRTDPVLHIELRRWADILVVAPLTANTLSKIALGLCDNLLTSVIRAWNPLFPIFLAPS 503
WK R+DPVLHI+LRRWAD+L+VAPL ANTL K+A G+CDNLLT V+RAW+ P+ P+
Sbjct: 2 WKSRSDPVLHIDLRRWADLLLVAPLDANTLGKVASGICDNLLTCVMRAWDRSKPLLFCPA 61
Query: 504 MVSNSYNSSITKRHLNMIKEEMPWITVFKPSEKVVGIYGDIGLGGMMDGNEIVDKV 559
M + + IT + ++ +K ++ + ++K+V GD GLG M + IVDKV
Sbjct: 62 MNTAMWEHPITAQQVDQLK-AFGYVEIPCVAKKLV--CGDEGLGAMAEVGTIVDKV 114
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.309 0.127 0.353
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,831,092
Number of Sequences: 60738
Number of extensions: 1337946
Number of successful extensions: 4705
Number of sequences better than 1.0e-05: 9
Number of HSP's better than 0.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4679
Number of HSP's gapped (non-prelim): 18
length of query: 649
length of database: 30,389,216
effective HSP length: 113
effective length of query: 536
effective length of database: 23,525,822
effective search space: 12609840592
effective search space used: 12609840592
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)