ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI4369 good J KOG0746 Translation, ribosomal structure and biogenesis 60S ribosomal protein L3 and related proteins
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI4369 1523895 1525055 387
(387 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YOR063w [J] KOG0746 60S ribosomal protein L3 and related proteins 701 0.0
SPAPB8E5.06c [J] KOG0746 60S ribosomal protein L3 and related pr... 582 e-166
SPAC17A5.03 [J] KOG0746 60S ribosomal protein L3 and related pro... 582 e-166
Hs4506649 [J] KOG0746 60S ribosomal protein L3 and related proteins 507 e-143
CE05598 [J] KOG0746 60S ribosomal protein L3 and related proteins 505 e-143
At1g43170 [J] KOG0746 60S ribosomal protein L3 and related proteins 484 e-136
At1g61580 [J] KOG0746 60S ribosomal protein L3 and related proteins 481 e-135
Hs4826988 [J] KOG0746 60S ribosomal protein L3 and related proteins 476 e-134
7299419 [J] KOG0746 60S ribosomal protein L3 and related proteins 466 e-131
Hs22050357 [J] KOG0746 60S ribosomal protein L3 and related prot... 400 e-111
ECU09g1000 [J] KOG0746 60S ribosomal protein L3 and related prot... 348 6e-96
ECU03g1220 [J] KOG0746 60S ribosomal protein L3 and related prot... 348 6e-96
Hs22055156 [J] KOG0746 60S ribosomal protein L3 and related prot... 223 4e-58
Hs17466365 [J] KOG0746 60S ribosomal protein L3 and related prot... 222 8e-58
Hs18583607 [J] KOG0746 60S ribosomal protein L3 and related prot... 165 9e-41
7299422 [J] KOG0746 60S ribosomal protein L3 and related proteins 134 3e-31
7299421 [J] KOG0746 60S ribosomal protein L3 and related proteins 125 8e-29
Hs18596957 [J] KOG0746 60S ribosomal protein L3 and related prot... 98 2e-20
Hs18564863 [J] KOG0746 60S ribosomal protein L3 and related prot... 91 2e-18
Hs18566516 [J] KOG0746 60S ribosomal protein L3 and related prot... 89 1e-17
Hs17452839 [J] KOG0746 60S ribosomal protein L3 and related prot... 83 8e-16
Hs17472282 [J] KOG0746 60S ribosomal protein L3 and related prot... 74 4e-13
Hs20472413 [J] KOG0746 60S ribosomal protein L3 and related prot... 51 3e-06
>YOR063w [J] KOG0746 60S ribosomal protein L3 and related proteins
Length = 387
Score = 701 bits (1810), Expect = 0.0
Identities = 337/387 (87%), Positives = 359/387 (92%)
Query: 1 MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDQTKPVALTSFLGYKAGMSTIVRDL 60
MSHRKYEAPRHGHLGFLPRKRAAS+R RVK+FPKDD++KPVALTSFLGYKAGM+TIVRDL
Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDL 60
Query: 61 DRPGSKFHKREVVEAXXXXXXXXXXXXXXXXXXETPRGLRSLTTVWAEHLSDEVKRRFYK 120
DRPGSKFHKREVVEA ETPRGLRSLTTVWAEHLSDEVKRRFYK
Sbjct: 61 DRPGSKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWYKSKKKAFTKYSAKYAENGAQVDRELARIKKYASVVRVLVHTQVRKTPLSQKKAHLAE 180
NWYKSKKKAFTKYSAKYA++GA ++RELARIKKYASVVRVLVHTQ+RKTPL+QKKAHLAE
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGAGIERELARIKKYASVVRVLVHTQIRKTPLAQKKAHLAE 180
Query: 181 IQLNGGSVSDKVDWAKEHFEKTVAVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKKLPR 240
IQLNGGS+S+KVDWA+EHFEKTVAVDSVFEQNEMID +AVTKGHGFEGVTHRWGTKKLPR
Sbjct: 181 IQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLPR 240
Query: 241 KTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKVYRVGKGDDEANAATEFDR 300
KTHRGLRKVACIGAWHPAHVMWSVARAGQRGYH RTSINHK+YRVGKGDDEAN AT FDR
Sbjct: 241 KTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHKIYRVGKGDDEANGATSFDR 300
Query: 301 TKKTITPMGGFVHYGAINNDFVILKGSIPGTRKRVVTLRKSLYTNTSRKALEEVTLKWID 360
TKKTITPMGGFVHYG I NDF+++KG IPG RKR+VTLRKSLYTNTSRKALEEV+LKWID
Sbjct: 301 TKKTITPMGGFVHYGEIKNDFIMVKGCIPGNRKRIVTLRKSLYTNTSRKALEEVSLKWID 360
Query: 361 TASKFGKGRFQTPAEKHAFLGTLKKDL 387
TASKFGKGRFQTPAEKHAF+GTLKKDL
Sbjct: 361 TASKFGKGRFQTPAEKHAFMGTLKKDL 387
>SPAPB8E5.06c [J] KOG0746 60S ribosomal protein L3 and related proteins
Length = 388
Score = 582 bits (1500), Expect = e-166
Identities = 280/387 (72%), Positives = 320/387 (82%)
Query: 1 MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDQTKPVALTSFLGYKAGMSTIVRDL 60
MSH K+E PRHG LGFLPRKRA+ RG+VK+FPKDD +KPV LT+FLGYKAGM+ IVRDL
Sbjct: 1 MSHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDL 60
Query: 61 DRPGSKFHKREVVEAXXXXXXXXXXXXXXXXXXETPRGLRSLTTVWAEHLSDEVKRRFYK 120
DRPGSK HKRE++EA ETPRGLRSLTTVWAEHLS+EVKRRFYK
Sbjct: 61 DRPGSKMHKREILEAVTIIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYK 120
Query: 121 NWYKSKKKAFTKYSAKYAENGAQVDRELARIKKYASVVRVLVHTQVRKTPLSQKKAHLAE 180
NW+KSKKKAFTKY+ KYAE+ ++REL RIKKY SVVRVL HTQ+RKTPL+QKKAHL E
Sbjct: 121 NWFKSKKKAFTKYAKKYAESTQSINRELERIKKYCSVVRVLAHTQIRKTPLAQKKAHLME 180
Query: 181 IQLNGGSVSDKVDWAKEHFEKTVAVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKKLPR 240
IQ+NGGSV+DKV+WA+EHFEKTV + S FEQNEMIDV+ VT+G G EG T RWGTK+LPR
Sbjct: 181 IQVNGGSVADKVEWAREHFEKTVDIKSTFEQNEMIDVIGVTRGKGNEGTTARWGTKRLPR 240
Query: 241 KTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKVYRVGKGDDEANAATEFDR 300
KTHRGLRKVACIGAWHPA+V W+VARAG GY HRT +N K+YR+G GDD NA+T+FD
Sbjct: 241 KTHRGLRKVACIGAWHPANVQWTVARAGNAGYMHRTQLNSKIYRIGAGDDAKNASTDFDA 300
Query: 301 TKKTITPMGGFVHYGAINNDFVILKGSIPGTRKRVVTLRKSLYTNTSRKALEEVTLKWID 360
T+K ITPMGGFV YG + NDFV+L G+ PG KRV+TLRKSL T+TSRKALE V+LKWID
Sbjct: 301 TEKRITPMGGFVRYGVVENDFVMLNGATPGPVKRVLTLRKSLLTHTSRKALEPVSLKWID 360
Query: 361 TASKFGKGRFQTPAEKHAFLGTLKKDL 387
TASKFG GRFQTPAE FLGTLKKD+
Sbjct: 361 TASKFGHGRFQTPAEAKQFLGTLKKDV 387
>SPAC17A5.03 [J] KOG0746 60S ribosomal protein L3 and related proteins
Length = 388
Score = 582 bits (1500), Expect = e-166
Identities = 280/387 (72%), Positives = 320/387 (82%)
Query: 1 MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDQTKPVALTSFLGYKAGMSTIVRDL 60
MSH K+E PRHG LGFLPRKRA+ RG+VK+FPKDD +KPV LT+FLGYKAGM+ IVRDL
Sbjct: 1 MSHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDL 60
Query: 61 DRPGSKFHKREVVEAXXXXXXXXXXXXXXXXXXETPRGLRSLTTVWAEHLSDEVKRRFYK 120
DRPGSK HKRE++EA ETPRGLRSLTTVWAEHLS+EVKRRFYK
Sbjct: 61 DRPGSKMHKREILEAVTVIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYK 120
Query: 121 NWYKSKKKAFTKYSAKYAENGAQVDRELARIKKYASVVRVLVHTQVRKTPLSQKKAHLAE 180
NW+KSKKKAFTKY+ KYAE+ ++REL RIKKY SVVRVL HTQ+RKTPL+QKKAHL E
Sbjct: 121 NWFKSKKKAFTKYAKKYAESTQSINRELERIKKYCSVVRVLAHTQIRKTPLAQKKAHLME 180
Query: 181 IQLNGGSVSDKVDWAKEHFEKTVAVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKKLPR 240
IQ+NGGSV+DKV+WA+EHFEKTV + S FEQNEMIDV+ VT+G G EG T RWGTK+LPR
Sbjct: 181 IQVNGGSVADKVEWAREHFEKTVDIKSTFEQNEMIDVIGVTRGKGNEGTTARWGTKRLPR 240
Query: 241 KTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKVYRVGKGDDEANAATEFDR 300
KTHRGLRKVACIGAWHPA+V W+VARAG GY HRT +N K+YR+G GDD NA+T+FD
Sbjct: 241 KTHRGLRKVACIGAWHPANVQWTVARAGNAGYMHRTQLNSKIYRIGAGDDAKNASTDFDA 300
Query: 301 TKKTITPMGGFVHYGAINNDFVILKGSIPGTRKRVVTLRKSLYTNTSRKALEEVTLKWID 360
T+K ITPMGGFV YG + NDFV+L G+ PG KRV+TLRKSL T+TSRKALE V+LKWID
Sbjct: 301 TEKRITPMGGFVRYGVVENDFVMLNGATPGPVKRVLTLRKSLLTHTSRKALEPVSLKWID 360
Query: 361 TASKFGKGRFQTPAEKHAFLGTLKKDL 387
TASKFG GRFQTPAE FLGTLKKD+
Sbjct: 361 TASKFGHGRFQTPAEAKQFLGTLKKDV 387
>Hs4506649 [J] KOG0746 60S ribosomal protein L3 and related proteins
Length = 403
Score = 507 bits (1305), Expect = e-143
Identities = 247/395 (62%), Positives = 308/395 (77%), Gaps = 9/395 (2%)
Query: 1 MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDQTKPVALTSFLGYKAGMSTIVRDL 60
MSHRK+ APRHG LGFLPRKR++ RG+VKSFPKDD +KPV LT+FLGYKAGM+ IVR++
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 DRPGSKFHKREVVEAXXXXXXXXXXXXXXXXXXETPRGLRSLTTVWAEHLSDEVKRRFYK 120
DRPGSK +K+EVVEA ETPRGLR+ TV+AEH+SDE KRRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWYKSKKKAFTKYSAKYAENGA--QVDRELARIKKYASVVRVLVHTQVRKTPLSQKKAHL 178
NW+KSKKKAFTKY K+ + Q++++ + +KKY V+RV+ HTQ+R PL QKKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180
Query: 179 AEIQLNGGSVSDKVDWAKEHFEKTVAVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKKL 238
EIQ+NGG+V++K+DWA+E E+ V V+ VF Q+EMIDV+ VTKG G++GVT RW TKKL
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240
Query: 239 PRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKVYRVGKG----DDEA-- 292
PRKTHRGLRKVACIGAWHPA V +SVARAGQ+GYHHRT IN K+Y++G+G D +
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 300
Query: 293 -NAATEFDRTKKTITPMGGFVHYGAINNDFVILKGSIPGTRKRVVTLRKSLYTNTSRKAL 351
NA+T++D + K+I P+GGFVHYG + NDFV+LKG + GT+KRV+TLRKSL T R+AL
Sbjct: 301 NNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRAL 360
Query: 352 EEVTLKWIDTASKFGKGRFQTPAEKHAFLGTLKKD 386
E++ LK+IDT SKFG GRFQT EK AF+G LKKD
Sbjct: 361 EKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLKKD 395
>CE05598 [J] KOG0746 60S ribosomal protein L3 and related proteins
Length = 401
Score = 505 bits (1300), Expect = e-143
Identities = 234/392 (59%), Positives = 306/392 (77%), Gaps = 6/392 (1%)
Query: 1 MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDQTKPVALTSFLGYKAGMSTIVRDL 60
MSHRK+ APRHGH+GF P+KR+ + RGR+K+FPKDD++KP+ LT+FLGYKAGM+ IVRD+
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60
Query: 61 DRPGSKFHKREVVEAXXXXXXXXXXXXXXXXXXETPRGLRSLTTVWAEHLSDEVKRRFYK 120
D+PGSK +K+EVVEA +TP+G R+LTT+WAEHLS+E +RRFY
Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 121 NWYKSKKKAFTKYSAKYAENGAQ--VDRELARIKKYASVVRVLVHTQVRKTPLSQKKAHL 178
NW KSKKKAFTKY+ K+ + + ++ + A++KKY S +RV+ HTQ++ QKKAHL
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHL 180
Query: 179 AEIQLNGGSVSDKVDWAKEHFEKTVAVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKKL 238
EIQ+NGG++ KVDWA+EH EK V VD+VF Q+EMID + VT+GHGF+GVT RW TKKL
Sbjct: 181 VEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKL 240
Query: 239 PRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKVYRVGKG----DDEANA 294
PRKTH+GLRKVACIGAWHP+ V ++VARAGQ+G+HHRT IN+K+YR+GK + + N
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNG 300
Query: 295 ATEFDRTKKTITPMGGFVHYGAINNDFVILKGSIPGTRKRVVTLRKSLYTNTSRKALEEV 354
+TEFD T+KTITPMGGF YG +N D+++L+G++ G +KR++TLRKSL T T R A E++
Sbjct: 301 STEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKI 360
Query: 355 TLKWIDTASKFGKGRFQTPAEKHAFLGTLKKD 386
LKWIDT+SK G GRFQT AEK AF+G LK+D
Sbjct: 361 NLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRD 392
>At1g43170 [J] KOG0746 60S ribosomal protein L3 and related proteins
Length = 389
Score = 484 bits (1245), Expect = e-136
Identities = 235/389 (60%), Positives = 299/389 (76%), Gaps = 4/389 (1%)
Query: 1 MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDQTKPVALTSFLGYKAGMSTIVRDL 60
MSHRK+E PRHG LGFLPRKRA RG+VK+FPKDDQTKP T+F+GYKAGM+ IVR++
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60
Query: 61 DRPGSKFHKREVVEAXXXXXXXXXXXXXXXXXXETPRGLRSLTTVWAEHLSDEVKRRFYK 120
++PGSK HK+E EA +TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120
Query: 121 NWYKSKKKAFTKYSAKY-AENGAQ-VDRELARIKKYASVVRVLVHTQVRKTP-LSQKKAH 177
NW KSKKKAFT Y+ +Y +E+G + + +L ++KKYA+V+RVL HTQ+RK L QKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180
Query: 178 LAEIQLNGGSVSDKVDWAKEHFEKTVAVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKK 237
+ EIQ+NGG+++ KVD+A FEK + +++VF+++EMID++ VTKG G+EGV RWG +
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 238 LPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKVYRVGKGDDEANAA-T 296
LPRKTHRGLRKVACIGAWHPA V ++VARAGQ GYHHRT +N K+YR+GK EA+ A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300
Query: 297 EFDRTKKTITPMGGFVHYGAINNDFVILKGSIPGTRKRVVTLRKSLYTNTSRKALEEVTL 356
E+DRT+K +TPMGGF HYG + +D++++KG G +KRVVTLR+SL T TSR ALEE+ L
Sbjct: 301 EYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKL 360
Query: 357 KWIDTASKFGKGRFQTPAEKHAFLGTLKK 385
K+IDTAS FG GRFQT EK F + K
Sbjct: 361 KFIDTASIFGHGRFQTSLEKMRFYNRVTK 389
>At1g61580 [J] KOG0746 60S ribosomal protein L3 and related proteins
Length = 390
Score = 481 bits (1237), Expect = e-135
Identities = 237/385 (61%), Positives = 290/385 (74%), Gaps = 4/385 (1%)
Query: 1 MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDQTKPVALTSFLGYKAGMSTIVRDL 60
MSHRK+E PRHG LGFLPRKRA+ RG+VK+FPKDD TKP LTSFLGYKAGM+ IVRD+
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDV 60
Query: 61 DRPGSKFHKREVVEAXXXXXXXXXXXXXXXXXXETPRGLRSLTTVWAEHLSDEVKRRFYK 120
++PGSK HK+E EA +TPRGLRSL TVWA+HLS+E++RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYK 120
Query: 121 NWYKSKKKAFTKYSAKYA--ENGAQVDRELARIKKYASVVRVLVHTQVRKTP-LSQKKAH 177
NW KSKKKAFT+YS K+ E + +L ++KKY SV+RVL HTQ+RK L QKKAH
Sbjct: 121 NWAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAH 180
Query: 178 LAEIQLNGGSVSDKVDWAKEHFEKTVAVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKK 237
L EIQ+NGG ++ KVD+A FEK V VD++F+++EMID++ VTKG G+EGV RWG +
Sbjct: 181 LNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 238 LPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKVYRVGK-GDDEANAAT 296
LPRKTHRGLRKVACIGAWHPA V ++VARAGQ GYHHRT +N KVYRVGK G + +A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMT 300
Query: 297 EFDRTKKTITPMGGFVHYGAINNDFVILKGSIPGTRKRVVTLRKSLYTNTSRKALEEVTL 356
E+DRT+K ITPMGGF HYG + D++++KG G +KRVVTLR++L TSR A+EE+ L
Sbjct: 301 EYDRTEKDITPMGGFPHYGIVKEDYLMIKGCCVGPKKRVVTLRQTLLKQTSRLAMEEIKL 360
Query: 357 KWIDTASKFGKGRFQTPAEKHAFLG 381
K+ID AS G GRFQT EK F G
Sbjct: 361 KFIDAASNGGHGRFQTSQEKAKFYG 385
>Hs4826988 [J] KOG0746 60S ribosomal protein L3 and related proteins
Length = 407
Score = 476 bits (1224), Expect = e-134
Identities = 233/396 (58%), Positives = 294/396 (73%), Gaps = 9/396 (2%)
Query: 1 MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDQTKPVALTSFLGYKAGMSTIVRDL 60
MSHRK+ APRHGHLGFLP KR+ RG+VK++P+DD ++PV LT+FLGYKAGM+ +R++
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60
Query: 61 DRPGSKFHKREVVEAXXXXXXXXXXXXXXXXXXETPRGLRSLTTVWAEHLSDEVKRRFYK 120
RPG K KRE VEA TPRGLRS T++AEHLSDE +RRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120
Query: 121 NWYKSKKKAFTKYSAKYAENGA--QVDRELARIKKYASVVRVLVHTQVRKTPLSQKKAHL 178
+W+KSKKKAFTK ++ + Q+ ++ A +KKY V+RV+VHTQ++ P QKKAH+
Sbjct: 121 DWHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHI 180
Query: 179 AEIQLNGGSVSDKVDWAKEHFEKTVAVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKKL 238
EIQLNGG+V++KV WA+ EK V V SVF Q+E+IDV+AVTKG G +GVT RW TKKL
Sbjct: 181 MEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKL 240
Query: 239 PRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKVYRVGKGDD-------E 291
PRKTH+GLRKVACIGAWHPA V S+ARAGQ+GYHHRT +N K++R+G+G +
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIFRIGRGPHMEDGKLVK 300
Query: 292 ANAATEFDRTKKTITPMGGFVHYGAINNDFVILKGSIPGTRKRVVTLRKSLYTNTSRKAL 351
NA+T +D T K+ITP+GGF HYG +NNDFV+LKG I GT+KRV+TLRKSL + SR+A+
Sbjct: 301 NNASTSYDVTAKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQAV 360
Query: 352 EEVTLKWIDTASKFGKGRFQTPAEKHAFLGTLKKDL 387
E + LK+IDT SKFG GRFQT EK AF+G KK L
Sbjct: 361 ENIELKFIDTTSKFGHGRFQTAQEKRAFMGPQKKHL 396
>7299419 [J] KOG0746 60S ribosomal protein L3 and related proteins
Length = 403
Score = 466 bits (1200), Expect = e-131
Identities = 226/382 (59%), Positives = 286/382 (74%), Gaps = 9/382 (2%)
Query: 14 LGFLPRKRAASVRGRVKSFPKDDQTKPVALTSFLGYKAGMSTIVRDLDRPGSKFHKREVV 73
+ F P+KR+A RG+VK+FPKDD +KPV LT F+GYKAGM+ IVR+ DRPGSK +K+EVV
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 74 EAXXXXXXXXXXXXXXXXXXETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAFTKY 133
EA ETP GLR+L VWA+HLS+E +RRFYKNWYKSKKKAFTK
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKA 120
Query: 134 SAKYAENGAQ--VDRELARIKKYASVVRVLVHTQVRKTPLSQKKAHLAEIQLNGGSVSDK 191
S K+ ++ + ++ + ++ +Y V+RV+ H+Q+R QKKAH+ EIQLNGGS+ DK
Sbjct: 121 SKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDK 180
Query: 192 VDWAKEHFEKTVAVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVAC 251
V WA+EH EK + V +VF Q+EMID V VTKG GF+GVT RW TKKLPRKTH+GLRKVAC
Sbjct: 181 VKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVAC 240
Query: 252 IGAWHPAHVMWSVARAGQRGYHHRTSINHKVYRVGKGDD-------EANAATEFDRTKKT 304
IGAWHP+ V +VARAGQ+GYHHRT IN K+YR+G G + NA+TE+D T K+
Sbjct: 241 IGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKS 300
Query: 305 ITPMGGFVHYGAINNDFVILKGSIPGTRKRVVTLRKSLYTNTSRKALEEVTLKWIDTASK 364
ITPMGGF HYG +NNDFV++KG G++KR++TLRKSL +T R ALE++ LK+IDT+SK
Sbjct: 301 ITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSK 360
Query: 365 FGKGRFQTPAEKHAFLGTLKKD 386
G GRFQTPA+K AF+G LKKD
Sbjct: 361 MGHGRFQTPADKLAFMGPLKKD 382
>Hs22050357 [J] KOG0746 60S ribosomal protein L3 and related proteins
Length = 432
Score = 400 bits (1027), Expect = e-111
Identities = 206/395 (52%), Positives = 275/395 (69%), Gaps = 15/395 (3%)
Query: 1 MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDQTKPVALTSFLGYKAGMSTIVRDL 60
MSHR++ APRHG LGFLP++R+ G+VKSFPKDD +K V LT+FLGYKAGM+ I+R++
Sbjct: 36 MSHRRFSAPRHGSLGFLPQQRSRKHHGKVKSFPKDDPSKLVHLTAFLGYKAGMTNIMREV 95
Query: 61 DRPGSKFHKREVVEAXXXXXXXXXXXXXXXXXXETPRGLRSLTTVWAEHLSDEVKRRFYK 120
DRPGSK +K+EV+EA ETPRGL++ TV+AEH+SD KR FYK
Sbjct: 96 DRPGSKVNKKEVIEAVTIVEIPPMVVVAIVGFVETPRGLQTFNTVFAEHISDACKRHFYK 155
Query: 121 NWYKSKKKAFTKYSAKYAENGA--QVDRELARIKKYASVVRVLVHTQVRKTPLSQKKAHL 178
N +KSKKKAFTKY K + Q++++ + +KKY V+ ++ +TQ+ PL Q+KAHL
Sbjct: 156 NRHKSKKKAFTKYCKKCQDEDGKKQLEKDFSSMKKYRQVICIIAYTQMCLLPLHQRKAHL 215
Query: 179 AEIQLNGGSVSDKVDWAKEHFEKTVAVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKKL 238
EIQ+ GG+++ K+DWA E E+ V V+ VFEQ++MIDV+ +TKG+G++GVT RW TKKL
Sbjct: 216 MEIQVKGGTMAKKLDWAHERLEQQVPVNQVFEQDKMIDVIRLTKGNGYKGVTSRWHTKKL 275
Query: 239 PRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKVYRVGKG----DDEA-- 292
P KTHRGL KVAC G HPA V VA Q+GY H T IN K+Y++ +G D +
Sbjct: 276 PHKTHRGLCKVACTGTQHPAPVALPVACIWQKGYCHSTEIN-KIYKISQGYFVRDSKLIK 334
Query: 293 -NAATEFDRTKKTITPMGGFVHYGAINNDFVILKGSIPGTRKRVVTLRKSLYTNTSRKAL 351
NA+T++D + P+G FVHYG + NDFV+LK + T+K+V+TL KSL T R+ L
Sbjct: 335 NNASTDYD-----LHPLGAFVHYGEVTNDFVMLKDCVVDTKKQVLTLHKSLPVPTKRRPL 389
Query: 352 EEVTLKWIDTASKFGKGRFQTPAEKHAFLGTLKKD 386
E++ LK+IDT SKFG G FQT EK AF+ LKKD
Sbjct: 390 EKIDLKFIDTTSKFGHGCFQTMEEKTAFMAPLKKD 424
>ECU09g1000 [J] KOG0746 60S ribosomal protein L3 and related proteins
Length = 383
Score = 348 bits (894), Expect = 6e-96
Identities = 190/391 (48%), Positives = 252/391 (63%), Gaps = 17/391 (4%)
Query: 1 MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDQTKPVALTSFLGYKAGMSTIVRDL 60
MS RK+ APRHG L F PRKR+ ++R +FP DD+++PV LT F+ YKAGM+ +VR
Sbjct: 1 MSCRKFNAPRHGSLQFCPRKRSKTIRPAAGAFPADDRSQPVHLTGFMAYKAGMTHVVRTK 60
Query: 61 DRPG-SKFHKREVVEAXXXXXXXXXXXXXXXXXXETPRGLRSLTTVWAEHLSDEVKRRFY 119
+ +K RE+++A +T GLR L V A ++SD V RR +
Sbjct: 61 TQVAKNKQLSREIMDAVTVLEAPPMVVYGIVGYEKTVTGLRRLPIVTAAYVSDGVLRRMF 120
Query: 120 KNWYKSKKKA--FTKYSAKYAENGAQVDRELARIKKYASVVRVLVHTQVRKTP-LSQKKA 176
N Y SK+ A F K G+ + + IK+ A VRVLV TQ L KKA
Sbjct: 121 GNRYASKESAGQFCK--------GSVCESRVEMIKERAHCVRVLVQTQPTLIKGLGLKKA 172
Query: 177 HLAEIQLNGGSVSDKVDWAKEHFEKTVAVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTK 236
H+AEIQ+NGGS+S+KV+WA EK +A+ VF NE ID + VTKG GF+G R+G +
Sbjct: 173 HIAEIQVNGGSISEKVEWALGRLEKEIAIGEVFGVNENIDTIGVTKGKGFQGTVKRFGVR 232
Query: 237 KLPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKVYRVGKGDDEANAAT 296
K PRK+ +G+RKVACIGAWHP+ VM+S+ARAGQ G+H RT N +VY +G G +N T
Sbjct: 233 KQPRKSRKGIRKVACIGAWHPSRVMYSIARAGQMGFHRRTEKNKRVYMIGNG--SSNIKT 290
Query: 297 EFDRTKKTITPMGGFVHYGAINNDFVILKGSIPGTRKRVVTLRKSLYTNTSRKALEEVTL 356
EFD T+K I+PMGGF HYG + NDF+++KG++ G RKRVVTLRKSL ++A EE+ +
Sbjct: 291 EFDLTEKPISPMGGFPHYGEVRNDFIMVKGAVVGARKRVVTLRKSL---LRQRAGEELVI 347
Query: 357 KWIDTASKFGKGRFQTPAEKHAFLGTLKKDL 387
K++DT+SK G GRFQT AEK AF G K D+
Sbjct: 348 KFVDTSSKIGHGRFQTSAEKKAFYGARKADI 378
>ECU03g1220 [J] KOG0746 60S ribosomal protein L3 and related proteins
Length = 383
Score = 348 bits (894), Expect = 6e-96
Identities = 190/391 (48%), Positives = 252/391 (63%), Gaps = 17/391 (4%)
Query: 1 MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDQTKPVALTSFLGYKAGMSTIVRDL 60
MS RK+ APRHG L F PRKR+ ++R +FP DD+++PV LT F+ YKAGM+ +VR
Sbjct: 1 MSCRKFNAPRHGSLQFCPRKRSKTIRPAAGAFPADDRSQPVHLTGFMAYKAGMTHVVRTK 60
Query: 61 DRPG-SKFHKREVVEAXXXXXXXXXXXXXXXXXXETPRGLRSLTTVWAEHLSDEVKRRFY 119
+ +K RE+++A +T GLR L V A ++SD V RR +
Sbjct: 61 TQVAKNKQLSREIMDAVTVLEAPPMVVYGIVGYEKTVTGLRRLPIVTAAYVSDGVLRRMF 120
Query: 120 KNWYKSKKKA--FTKYSAKYAENGAQVDRELARIKKYASVVRVLVHTQVRKTP-LSQKKA 176
N Y SK+ A F K G+ + + IK+ A VRVLV TQ L KKA
Sbjct: 121 GNRYASKESAGQFCK--------GSVCESRVEMIKERAHCVRVLVQTQPTLIKGLGLKKA 172
Query: 177 HLAEIQLNGGSVSDKVDWAKEHFEKTVAVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTK 236
H+AEIQ+NGGS+S+KV+WA EK +A+ VF NE ID + VTKG GF+G R+G +
Sbjct: 173 HIAEIQVNGGSISEKVEWALGRLEKEIAIGEVFGVNENIDTIGVTKGKGFQGTVKRFGVR 232
Query: 237 KLPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKVYRVGKGDDEANAAT 296
K PRK+ +G+RKVACIGAWHP+ VM+S+ARAGQ G+H RT N +VY +G G +N T
Sbjct: 233 KQPRKSRKGIRKVACIGAWHPSRVMYSIARAGQMGFHRRTEKNKRVYMIGNG--SSNIKT 290
Query: 297 EFDRTKKTITPMGGFVHYGAINNDFVILKGSIPGTRKRVVTLRKSLYTNTSRKALEEVTL 356
EFD T+K I+PMGGF HYG + NDF+++KG++ G RKRVVTLRKSL ++A EE+ +
Sbjct: 291 EFDLTEKPISPMGGFPHYGEVRNDFIMVKGAVVGARKRVVTLRKSL---LRQRAGEELVI 347
Query: 357 KWIDTASKFGKGRFQTPAEKHAFLGTLKKDL 387
K++DT+SK G GRFQT AEK AF G K D+
Sbjct: 348 KFVDTSSKIGHGRFQTSAEKKAFYGARKADI 378
>Hs22055156 [J] KOG0746 60S ribosomal protein L3 and related proteins
Length = 222
Score = 223 bits (568), Expect = 4e-58
Identities = 112/211 (53%), Positives = 150/211 (71%), Gaps = 8/211 (3%)
Query: 183 LNGGSVSDKVDWAKEHFEKTVAVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKKLPRKT 242
+N G+V++K+DWA++ E+ V V+ VF Q+EMI V+ VTKG G++GVT W T KLP KT
Sbjct: 5 VNRGTVAEKLDWAQKRLEQQVPVNQVFGQDEMIKVIGVTKGKGYKGVTSCWHTTKLPHKT 64
Query: 243 HRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKVYRVGKGDD-------EANAA 295
HRGL KVACIGAWH AHV +SV+ AGQ+GYHH T IN K+Y++G+G + NA+
Sbjct: 65 HRGLCKVACIGAWHLAHVAFSVSHAGQKGYHHGTEINKKIYKIGQGYPIMDGKLIKNNAS 124
Query: 296 TEFDRTKKTITPMGGFVHYGAINNDFVILKGSIPGTRKRVVTLRKSLYTNTSRKALEEVT 355
++D + K+I +GGFVH G + NDFV+LKG + GT+K+V+TL KSL T +ALE+
Sbjct: 125 IDYDLSDKSINSLGGFVHCGKVTNDFVMLKGYVVGTKKQVLTLCKSLLVQTKWQALEKTD 184
Query: 356 LKWIDTASKFGKGRFQTPAEKHAFLGTLKKD 386
LK+ DT S FG FQT +K AF+ LKKD
Sbjct: 185 LKFTDTTSNFGHCHFQT-MKKKAFVRPLKKD 214
>Hs17466365 [J] KOG0746 60S ribosomal protein L3 and related proteins
Length = 251
Score = 222 bits (565), Expect = 8e-58
Identities = 128/303 (42%), Positives = 173/303 (56%), Gaps = 62/303 (20%)
Query: 53 MSTIVRDLDRPGSKFHKREVVEAXXXXXXXXXXXXXXXXXXETPRGLRSLTTVWAEHLSD 112
M+ IV ++DRPGSK +K+EVVEA TPRGL + TV+ EH+SD
Sbjct: 1 MTHIVWEVDRPGSKVNKKEVVEAVTIVEITMVVAGIVGYVG-TPRGLWTFKTVFTEHISD 59
Query: 113 EVKRRFYKNWYKSKKKAFTKYSAKYAENGA--QVDRELARIKKYASVVRVLVHTQVRKTP 170
E KR FYKNW+KSKKKAFTKY K+ + Q++++ + +KKY
Sbjct: 60 ECKRHFYKNWHKSKKKAFTKYCKKWLDEDGKKQLEKDFSSMKKYC--------------- 104
Query: 171 LSQKKAHLAEIQLNGGSVSDKVDWAKEHFEKTVAVDSVFEQNEMIDVVAVTKGHGFEGVT 230
+KAH+ EIQ+N G+V++K+DWA+E E+ V V+ VF Q+EMIDV
Sbjct: 105 ---QKAHVMEIQVNRGTVAEKLDWARERLEQQVPVNQVFGQDEMIDV------------- 148
Query: 231 HRWGTKKLPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKVYRVG---- 286
IGAWHP V +S AR GQ+ YHH T IN K+Y++G
Sbjct: 149 ---------------------IGAWHPDRVAFSGARTGQKEYHHCTKINKKIYKIGQSYL 187
Query: 287 -KGDD--EANAATEFDRTKKTITPMGGFVHYGAINNDFVILKGSIPGTRKRVVTLRKSLY 343
KG + NA+T++D + K+I P+GGFVHYG + NDFV+LKG + T+KRV+TL KSL
Sbjct: 188 IKGGKLIKNNASTDYDLSVKSINPLGGFVHYGEVTNDFVMLKGCVVVTKKRVLTLHKSLL 247
Query: 344 TNT 346
T
Sbjct: 248 VQT 250
>Hs18583607 [J] KOG0746 60S ribosomal protein L3 and related proteins
Length = 169
Score = 165 bits (418), Expect = 9e-41
Identities = 80/134 (59%), Positives = 104/134 (76%), Gaps = 7/134 (5%)
Query: 260 VMWSVARAGQRGYHHRTSINHKVYRVGKG----DDEA---NAATEFDRTKKTITPMGGFV 312
+ +SVARAGQ+GYHHRT IN K+Y++G+G D + NA+T++D + K+I P+GGFV
Sbjct: 28 IKFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFV 87
Query: 313 HYGAINNDFVILKGSIPGTRKRVVTLRKSLYTNTSRKALEEVTLKWIDTASKFGKGRFQT 372
HYG + NDFV+LKG + GT+KRV+TLRKSL T R+ALE++ LK+IDT SKFG GRFQT
Sbjct: 88 HYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQT 147
Query: 373 PAEKHAFLGTLKKD 386
EK AF+G LKKD
Sbjct: 148 MEEKKAFMGPLKKD 161
>7299422 [J] KOG0746 60S ribosomal protein L3 and related proteins
Length = 148
Score = 134 bits (336), Expect = 3e-31
Identities = 64/113 (56%), Positives = 80/113 (70%)
Query: 14 LGFLPRKRAASVRGRVKSFPKDDQTKPVALTSFLGYKAGMSTIVRDLDRPGSKFHKREVV 73
+ F P+KR+A RG+VK+FPKDD +KPV LT F+GYKAGM+ IVR+ DRPGSK +K+EVV
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 74 EAXXXXXXXXXXXXXXXXXXETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSK 126
EA ETP GLR+L VWA+HLS+E +RRFYKNWY S+
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYVSE 113
>7299421 [J] KOG0746 60S ribosomal protein L3 and related proteins
Length = 125
Score = 125 bits (315), Expect = 8e-29
Identities = 61/108 (56%), Positives = 76/108 (69%)
Query: 14 LGFLPRKRAASVRGRVKSFPKDDQTKPVALTSFLGYKAGMSTIVRDLDRPGSKFHKREVV 73
+ F P+KR+A RG+VK+FPKDD +KPV LT F+GYKAGM+ IVR+ DRPGSK +K+EVV
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 74 EAXXXXXXXXXXXXXXXXXXETPRGLRSLTTVWAEHLSDEVKRRFYKN 121
EA ETP GLR+L VWA+HLS+E +RRFYKN
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 108
>Hs18596957 [J] KOG0746 60S ribosomal protein L3 and related proteins
Length = 133
Score = 97.8 bits (242), Expect = 2e-20
Identities = 46/82 (56%), Positives = 63/82 (76%), Gaps = 2/82 (2%)
Query: 94 ETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAFTKYSAKYA-ENG-AQVDRELARI 151
ETP+GLR+ TV+AEH+SDE KRRFYKNW+KSKKKAFTKY K+ ENG Q++++ + +
Sbjct: 11 ETPQGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAFTKYRKKWQDENGKKQLEKDFSSM 70
Query: 152 KKYASVVRVLVHTQVRKTPLSQ 173
KKY V+ V+ HTQ+ + L +
Sbjct: 71 KKYCQVIHVIAHTQMHRRALQK 92
Score = 50.1 bits (118), Expect = 6e-06
Identities = 24/44 (54%), Positives = 30/44 (67%)
Query: 343 YTNTSRKALEEVTLKWIDTASKFGKGRFQTPAEKHAFLGTLKKD 386
+T R+AL++ LK+ DT SKFG GR QT EK A +G LKKD
Sbjct: 82 HTQMHRRALQKTDLKFTDTTSKFGHGRLQTMEEKKASMGRLKKD 125
>Hs18564863 [J] KOG0746 60S ribosomal protein L3 and related proteins
Length = 103
Score = 91.3 bits (225), Expect = 2e-18
Identities = 44/67 (65%), Positives = 53/67 (78%)
Query: 1 MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDQTKPVALTSFLGYKAGMSTIVRDL 60
MSHRK+ PRHG LGFLP KR++ G+VKSFPKDD +KPV LT+FLGYKAGM+ IVR L
Sbjct: 1 MSHRKFSTPRHGSLGFLPWKRSSRHCGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVRAL 60
Query: 61 DRPGSKF 67
++ KF
Sbjct: 61 EKIDLKF 67
Score = 53.5 bits (127), Expect = 5e-07
Identities = 25/38 (65%), Positives = 30/38 (78%)
Query: 349 KALEEVTLKWIDTASKFGKGRFQTPAEKHAFLGTLKKD 386
+ALE++ LK+IDT SKFG G FQT EK AF+G LKKD
Sbjct: 58 RALEKIDLKFIDTPSKFGHGHFQTMEEKKAFMGPLKKD 95
>Hs18566516 [J] KOG0746 60S ribosomal protein L3 and related proteins
Length = 364
Score = 88.6 bits (218), Expect = 1e-17
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 24/116 (20%)
Query: 269 QRGYHHRTSINHKVYRVGKG---DDEA----NAATEFDRTKKTITPMGGFVHYGAINNDF 321
Q+GYHH T N K+ +G G DE NA+T+ D + K+I P+GGFVHY +NNDF
Sbjct: 265 QKGYHHCTENNKKICNIGHGYLTKDEKWIKNNASTDGDLSDKSINPLGGFVHYNEMNNDF 324
Query: 322 VILKGSIPGTRKRVVTLRKSLYTNTSRKALEEVTLKWIDTASKFGKGRFQTPAEKH 377
V+LKG + T R ALE+ LK+I+T S+FG+ FQT EK+
Sbjct: 325 VMLKGCV-----------------TKRPALEKTDLKFINTVSRFGRDHFQTMEEKN 363
Score = 54.7 bits (130), Expect = 2e-07
Identities = 24/37 (64%), Positives = 31/37 (82%)
Query: 15 GFLPRKRAASVRGRVKSFPKDDQTKPVALTSFLGYKA 51
GFLP KR++ + G+VKSFPKD+ +KP LT+FLGYKA
Sbjct: 190 GFLPWKRSSRLHGKVKSFPKDEPSKPFHLTAFLGYKA 226
>Hs17452839 [J] KOG0746 60S ribosomal protein L3 and related proteins
Length = 180
Score = 82.8 bits (203), Expect = 8e-16
Identities = 57/176 (32%), Positives = 78/176 (43%), Gaps = 56/176 (31%)
Query: 1 MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDQTKPVALTSFLGYKAGMSTIVRDL 60
MSHRK+ APR G L FLP + + G+VKSF K D ++ V FL YKAGM+ I
Sbjct: 1 MSHRKFSAPRQGSLSFLPGRHGSRHHGKVKSFSKLDPSQSVHFMVFLVYKAGMTYI---- 56
Query: 61 DRPGSKFHKREVVEAXXXXXXXXXXXXXXXXXXETPRGLRSLTTVWAEHLSDEVKRRFYK 120
VW EV R K
Sbjct: 57 --------------------------------------------VW------EVCRPGSK 66
Query: 121 NWYKSKKKAFTKYSAKYAENGA--QVDRELARIKKYASVVRVLVHTQVRKTPLSQK 174
NW+KS+KKAFT+Y K+ + Q+++ +KKY V+ ++ HTQ+ PL +K
Sbjct: 67 NWHKSEKKAFTEYCKKWQDEDGEKQLEKNFNSMKKYCQVICIIAHTQMCLLPLCRK 122
>Hs17472282 [J] KOG0746 60S ribosomal protein L3 and related proteins
Length = 168
Score = 73.9 bits (180), Expect = 4e-13
Identities = 35/57 (61%), Positives = 43/57 (75%)
Query: 1 MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDQTKPVALTSFLGYKAGMSTIV 57
MSHRK+ PR G GFLP+K + G+VKSFPKDD +KPV LT+ LGYKAGM+ I+
Sbjct: 1 MSHRKFSTPRQGAPGFLPQKCSGRHPGKVKSFPKDDPSKPVHLTALLGYKAGMTHIL 57
>Hs20472413 [J] KOG0746 60S ribosomal protein L3 and related proteins
Length = 132
Score = 50.8 bits (120), Expect = 3e-06
Identities = 27/51 (52%), Positives = 33/51 (63%)
Query: 336 VTLRKSLYTNTSRKALEEVTLKWIDTASKFGKGRFQTPAEKHAFLGTLKKD 386
V L+K T + LE++ LK+IDT SKFG G FQT EK AF+ LKKD
Sbjct: 76 VKLKKLNLHQTKWRVLEKIDLKFIDTTSKFGHGCFQTIEEKKAFMEPLKKD 126
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.318 0.133 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,490,157
Number of Sequences: 60738
Number of extensions: 892849
Number of successful extensions: 2084
Number of sequences better than 1.0e-05: 23
Number of HSP's better than 0.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2012
Number of HSP's gapped (non-prelim): 28
length of query: 387
length of database: 30,389,216
effective HSP length: 108
effective length of query: 279
effective length of database: 23,829,512
effective search space: 6648433848
effective search space used: 6648433848
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)