ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI4380 good C KOG3052 Energy production and conversion Cytochrome c1
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI4380 1526892 1527767 292
(292 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YOR065w [C] KOG3052 Cytochrome c1 478 e-135
SPBC29A3.18 [C] KOG3052 Cytochrome c1 307 1e-83
Hs21359867 [C] KOG3052 Cytochrome c1 296 2e-80
7295470 [C] KOG3052 Cytochrome c1 296 2e-80
HsM4503185 [C] KOG3052 Cytochrome c1 295 5e-80
At5g40810 [C] KOG3052 Cytochrome c1 282 5e-76
At3g27240 [C] KOG3052 Cytochrome c1 282 5e-76
7301764 [C] KOG3052 Cytochrome c1 250 1e-66
CE05514 [C] KOG3052 Cytochrome c1 239 3e-63
>YOR065w [C] KOG3052 Cytochrome c1
Length = 309
Score = 478 bits (1230), Expect = e-135
Identities = 227/288 (78%), Positives = 244/288 (83%), Gaps = 1/288 (0%)
Query: 5 FSTAAKQAVK-GTYVQRXXXXXXXXXXXXXSTMLYADSLTADAMTAAEHGLHAPGYGWSH 63
+STA A K G Q+ ST+LYADSLTA+AMTAAEHGLHAP Y WSH
Sbjct: 19 YSTATGAASKSGKLTQKLVTAGVAAAGITASTLLYADSLTAEAMTAAEHGLHAPAYAWSH 78
Query: 64 NGPLETFDHSSIRRGYQVYREVCAACHSLDRVAWRTMVGVSHTNAEVRAMAEEFEYDDEP 123
NGP ETFDH+SIRRGYQVYREVCAACHSLDRVAWRT+VGVSHTN EVR MAEEFEYDDEP
Sbjct: 79 NGPFETFDHASIRRGYQVYREVCAACHSLDRVAWRTLVGVSHTNEEVRNMAEEFEYDDEP 138
Query: 124 DDQGNPKKRPGKLADYVPGPYPNEQAARAANQGALPPDLSLIVKARHGGPDYIFALLTGY 183
D+QGNPKKRPGKL+DY+PGPYPNEQAARAANQGALPPDLSLIVKARHGG DYIF+LLTGY
Sbjct: 139 DEQGNPKKRPGKLSDYIPGPYPNEQAARAANQGALPPDLSLIVKARHGGCDYIFSLLTGY 198
Query: 184 PEEPPAGVVLPPGANYNPYFPGGSIAMGRVLFDDLVEYEDGTPATTSQMAKDVTTFLHWC 243
P+EPPAGV LPPG+NYNPYFPGGSIAM RVLFDD+VEYEDGTPATTSQMAKDVTTFL+WC
Sbjct: 199 PDEPPAGVALPPGSNYNPYFPGGSIAMARVLFDDMVEYEDGTPATTSQMAKDVTTFLNWC 258
Query: 244 SEPEHDERKRLGLKAMIXXXXXXXXXXXXKKFKWASIKSRKIVFNPPK 291
+EPEHDERKRLGLK +I KKFKWA IK+RK VFNPPK
Sbjct: 259 AEPEHDERKRLGLKTVIILSSLYLLSIWVKKFKWAGIKTRKFVFNPPK 306
>SPBC29A3.18 [C] KOG3052 Cytochrome c1
Length = 307
Score = 307 bits (787), Expect = 1e-83
Identities = 147/256 (57%), Positives = 183/256 (71%), Gaps = 3/256 (1%)
Query: 37 LYADSLTADAMTAAEHGLHAPGYGWSHNGPLETFDHSSIRRGYQVYREVCAACHSLDRVA 96
+Y SL+A T E GLH + W + L FDH+S+RRG+QVYREVC+ACHSL+ +A
Sbjct: 55 VYGPSLSAG--TPKEEGLHFIQHDWPQSKVLSGFDHASLRRGFQVYREVCSACHSLNLIA 112
Query: 97 WRTMVGVSHTNAEVRAMAEEFEYDDEPDDQGNPKKRPGKLADYVPGPYPNEQAARAANQG 156
WR +VGV+HT E + MA E EY+D PDD+GN KRPGKL+D++P PYPN +AARA+N G
Sbjct: 113 WRHLVGVTHTADEAKQMASEVEYEDGPDDEGNMFKRPGKLSDFLPPPYPNVEAARASNNG 172
Query: 157 ALPPDLSLIVKARHGGPDYIFALLTGYPEEPPAGVVLPPGANYNPYFPGGSIAMGRVLFD 216
A PPDLS +V+ RHGG DYI++LLTGY EPPAGV +P G N+NP+FPG IAM R LFD
Sbjct: 173 AAPPDLSCVVRGRHGGQDYIYSLLTGY-TEPPAGVEVPDGMNFNPFFPGTQIAMARPLFD 231
Query: 217 DLVEYEDGTPATTSQMAKDVTTFLHWCSEPEHDERKRLGLKAMIXXXXXXXXXXXXKKFK 276
D VE+EDGTPATT+Q AKDV FLHW SEPE D RK++G + + K+FK
Sbjct: 232 DAVEFEDGTPATTAQAAKDVVNFLHWASEPELDIRKKMGFQVITVLTILTALSMWYKRFK 291
Query: 277 WASIKSRKIVFNPPKK 292
W IK+RKI + P K
Sbjct: 292 WTPIKNRKIFYQRPIK 307
>Hs21359867 [C] KOG3052 Cytochrome c1
Length = 325
Score = 296 bits (758), Expect = 2e-80
Identities = 139/246 (56%), Positives = 178/246 (71%), Gaps = 1/246 (0%)
Query: 46 AMTAAEHGLHAPGYGWSHNGPLETFDHSSIRRGYQVYREVCAACHSLDRVAWRTMVGVSH 105
A++A++ LH P Y WSH G L + DH+SIRRG+QVY++VCA+CHS+D VA+R +VGV +
Sbjct: 81 AVSASDLELHPPSYPWSHRGLLSSLDHTSIRRGFQVYKQVCASCHSMDFVAYRHLVGVCY 140
Query: 106 TNAEVRAMAEEFEYDDEPDDQGNPKKRPGKLADYVPGPYPNEQAARAANQGALPPDLSLI 165
T E + +A E E D P++ G RPGKL DY P PYPN +AARAAN GALPPDLS I
Sbjct: 141 TEDEAKELAAEVEVQDGPNEDGEMFMRPGKLFDYFPKPYPNSEAARAANNGALPPDLSYI 200
Query: 166 VKARHGGPDYIFALLTGYPEEPPAGVVLPPGANYNPYFPGGSIAMGRVLFDDLVEYEDGT 225
V+ARHGG DY+F+LLTGY EPP GV L G +NPYFPG +IAM ++ D++E++DGT
Sbjct: 201 VRARHGGEDYVFSLLTGYC-EPPTGVSLREGLYFNPYFPGQAIAMAPPIYTDVLEFDDGT 259
Query: 226 PATTSQMAKDVTTFLHWCSEPEHDERKRLGLKAMIXXXXXXXXXXXXKKFKWASIKSRKI 285
PAT SQ+AKDV TFL W SEPEHD RKR+GLK ++ K+ KW+ +KSRK+
Sbjct: 260 PATMSQIAKDVCTFLRWASEPEHDHRKRMGLKMLMMMALLVPLVYTIKRHKWSVLKSRKL 319
Query: 286 VFNPPK 291
+ PPK
Sbjct: 320 AYRPPK 325
>7295470 [C] KOG3052 Cytochrome c1
Length = 307
Score = 296 bits (758), Expect = 2e-80
Identities = 138/239 (57%), Positives = 176/239 (72%), Gaps = 1/239 (0%)
Query: 54 LHAPGYGWSHNGPLETFDHSSIRRGYQVYREVCAACHSLDRVAWRTMVGVSHTNAEVRAM 113
+H+P W+H G + DH S+RRGY+VY++VC+ACHS+ +A+R +VGV+HT AE +A
Sbjct: 70 VHSPAQLWNHKGLFDALDHQSVRRGYEVYKQVCSACHSMQYIAYRNLVGVTHTEAEAKAE 129
Query: 114 AEEFEYDDEPDDQGNPKKRPGKLADYVPGPYPNEQAARAANQGALPPDLSLIVKARHGGP 173
AE+ D PDD GN RPGKL+DY P PYPNE+AARAAN GA PPDLS IV AR GG
Sbjct: 130 AEQITVKDGPDDTGNYYTRPGKLSDYFPSPYPNEEAARAANNGAYPPDLSYIVSARKGGE 189
Query: 174 DYIFALLTGYPEEPPAGVVLPPGANYNPYFPGGSIAMGRVLFDDLVEYEDGTPATTSQMA 233
DYIF+LLTGY + PAGVVL G +NPYFPGG+I+M +VL+++++EYEDGTP T SQ+A
Sbjct: 190 DYIFSLLTGY-HDAPAGVVLREGQYFNPYFPGGAISMAQVLYNEVIEYEDGTPPTQSQLA 248
Query: 234 KDVTTFLHWCSEPEHDERKRLGLKAMIXXXXXXXXXXXXKKFKWASIKSRKIVFNPPKK 292
KDV TFL W SEPEHD+RK+L +K + K+ KW+S+KSRKIVF P +K
Sbjct: 249 KDVATFLKWTSEPEHDDRKQLLIKVIGILGFLTVISYYIKRHKWSSLKSRKIVFVPKEK 307
>HsM4503185 [C] KOG3052 Cytochrome c1
Length = 325
Score = 295 bits (755), Expect = 5e-80
Identities = 138/246 (56%), Positives = 178/246 (72%), Gaps = 1/246 (0%)
Query: 46 AMTAAEHGLHAPGYGWSHNGPLETFDHSSIRRGYQVYREVCAACHSLDRVAWRTMVGVSH 105
A++A++ +H P Y WSH G L + DH+SIRRG+QVY++VCA+CHS+D VA+R +VGV +
Sbjct: 81 AVSASDLEVHPPSYPWSHRGLLSSLDHTSIRRGFQVYKQVCASCHSMDFVAYRHLVGVCY 140
Query: 106 TNAEVRAMAEEFEYDDEPDDQGNPKKRPGKLADYVPGPYPNEQAARAANQGALPPDLSLI 165
T E + +A E E D P++ G RPGKL DY P PYPN +AARAAN GALPPDLS I
Sbjct: 141 TEDEAKELAAEVEVQDGPNEDGEMFMRPGKLFDYFPKPYPNSEAARAANNGALPPDLSYI 200
Query: 166 VKARHGGPDYIFALLTGYPEEPPAGVVLPPGANYNPYFPGGSIAMGRVLFDDLVEYEDGT 225
V+ARHGG DY+F+LLTGY EPP GV L G +NPYFPG +IAM ++ D++E++DGT
Sbjct: 201 VRARHGGEDYVFSLLTGYC-EPPTGVSLREGLYFNPYFPGQAIAMAPPIYTDVLEFDDGT 259
Query: 226 PATTSQMAKDVTTFLHWCSEPEHDERKRLGLKAMIXXXXXXXXXXXXKKFKWASIKSRKI 285
PAT SQ+AKDV TFL W SEPEHD RKR+GLK ++ K+ KW+ +KSRK+
Sbjct: 260 PATMSQIAKDVCTFLRWASEPEHDHRKRMGLKMLMMMALLVPLVYTIKRHKWSVLKSRKL 319
Query: 286 VFNPPK 291
+ PPK
Sbjct: 320 AYRPPK 325
>At5g40810 [C] KOG3052 Cytochrome c1
Length = 307
Score = 282 bits (721), Expect = 5e-76
Identities = 131/246 (53%), Positives = 174/246 (70%), Gaps = 1/246 (0%)
Query: 43 TADAMTAAEHGLHAPGYGWSHNGPLETFDHSSIRRGYQVYREVCAACHSLDRVAWRTMVG 102
T + AEHGL P Y W H G L ++DH+SIRRG+QVY++VCA+CHS+ +++R +VG
Sbjct: 60 TVASADEAEHGLECPNYPWPHEGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVG 119
Query: 103 VSHTNAEVRAMAEEFEYDDEPDDQGNPKKRPGKLADYVPGPYPNEQAARAANQGALPPDL 162
V++T E +AMA E E D P+D+G RPGKL+D +P PY NE AAR AN GA PPDL
Sbjct: 120 VAYTEEEAKAMAAEIEVVDGPNDEGEMFTRPGKLSDRLPEPYSNESAARFANGGAYPPDL 179
Query: 163 SLIVKARHGGPDYIFALLTGYPEEPPAGVVLPPGANYNPYFPGGSIAMGRVLFDDLVEYE 222
SL+ KARH G +Y+FALLTGY +PPAG+ + G +YNPYFPGG+IAM ++L D+ VEYE
Sbjct: 180 SLVTKARHNGQNYVFALLTGY-RDPPAGISIREGLHYNPYFPGGAIAMPKMLNDEAVEYE 238
Query: 223 DGTPATTSQMAKDVTTFLHWCSEPEHDERKRLGLKAMIXXXXXXXXXXXXKKFKWASIKS 282
DGTPAT +QM KDV +FL W +EPE +ERK +G K + ++ KW+ +KS
Sbjct: 239 DGTPATEAQMGKDVVSFLSWAAEPEMEERKLMGFKWIFLLSLALLQAAYYRRLKWSVLKS 298
Query: 283 RKIVFN 288
RK+V +
Sbjct: 299 RKLVLD 304
>At3g27240 [C] KOG3052 Cytochrome c1
Length = 307
Score = 282 bits (721), Expect = 5e-76
Identities = 131/246 (53%), Positives = 175/246 (70%), Gaps = 1/246 (0%)
Query: 43 TADAMTAAEHGLHAPGYGWSHNGPLETFDHSSIRRGYQVYREVCAACHSLDRVAWRTMVG 102
T + AEHGL +P Y W H+G L ++DH+SIRRG+QVY++VCA+CHS+ +++R +VG
Sbjct: 60 TVASADEAEHGLESPEYPWPHDGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVG 119
Query: 103 VSHTNAEVRAMAEEFEYDDEPDDQGNPKKRPGKLADYVPGPYPNEQAARAANQGALPPDL 162
V++T E +AMA E E D P+D+G RPGKL+D P PY NE AAR AN GA PPDL
Sbjct: 120 VAYTEEEAKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYANESAARFANGGAYPPDL 179
Query: 163 SLIVKARHGGPDYIFALLTGYPEEPPAGVVLPPGANYNPYFPGGSIAMGRVLFDDLVEYE 222
SLI KARH GP+Y+FALLTGY +PPAG+ + G +YNPYFPGG+IAM ++L D+ VEYE
Sbjct: 180 SLITKARHNGPNYVFALLTGY-RDPPAGISIREGLHYNPYFPGGAIAMPKMLNDEAVEYE 238
Query: 223 DGTPATTSQMAKDVTTFLHWCSEPEHDERKRLGLKAMIXXXXXXXXXXXXKKFKWASIKS 282
DG PAT +QM KD+ +FL W +EPE +ERK +G K + ++ KW+ +KS
Sbjct: 239 DGVPATEAQMGKDIVSFLAWAAEPEMEERKLMGFKWIFLLSLALLQAAYYRRLKWSVLKS 298
Query: 283 RKIVFN 288
RK+V +
Sbjct: 299 RKLVLD 304
>7301764 [C] KOG3052 Cytochrome c1
Length = 344
Score = 250 bits (639), Expect = 1e-66
Identities = 125/255 (49%), Positives = 168/255 (65%), Gaps = 5/255 (1%)
Query: 36 MLYADSLTADAMTAAEHGLHAPGYGWSHNGPLETFDHSSIRRGYQVYREVCAACHSLDRV 95
++YA + DA + H H W+H G L D S+RRGY VY+EVC++CHSL +
Sbjct: 58 LIYALETSVDASSDCVHPAHQH---WNHKGLLSALDKESVRRGYTVYKEVCSSCHSLQYM 114
Query: 96 AWRTMVGVSHTNAEVRAMAEEFEYDDEPDDQGNPKKRPGKLADYVPGPYPNEQAARAANQ 155
A+R +VGV T AE +A AE D P+++G +RPGKL+D+ P PY NE+AAR+AN
Sbjct: 115 AYRNLVGVCMTEAEAKAEAEAITVRDGPNEEGEYYERPGKLSDHFPSPYANEEAARSANN 174
Query: 156 GALPPDLSLIVKARHGGPDYIFALLTGYPEEPPAGVVLPPGANYNPYFPGGSIAMGRVLF 215
G+ PPDLS IV AR GG DY+F+LLTGY +PPAG L G +NPYF GG+IAMG+V+
Sbjct: 175 GSYPPDLSYIVSARKGGEDYVFSLLTGYC-DPPAGFALRDGLYFNPYFSGGAIAMGKVVD 233
Query: 216 DDLVEYED-GTPATTSQMAKDVTTFLHWCSEPEHDERKRLGLKAMIXXXXXXXXXXXXKK 274
+++V +ED PA+ +Q+AKDV FL W SEPE DER+ L +K + K+
Sbjct: 234 NEVVSFEDPNVPASAAQIAKDVCVFLKWTSEPETDERRLLLIKVTLISTFLIGISYYIKR 293
Query: 275 FKWASIKSRKIVFNP 289
FKW+++KSRKI F P
Sbjct: 294 FKWSTLKSRKIFFIP 308
>CE05514 [C] KOG3052 Cytochrome c1
Length = 285
Score = 239 bits (610), Expect = 3e-63
Identities = 119/247 (48%), Positives = 161/247 (65%), Gaps = 2/247 (0%)
Query: 45 DAMTAAEHGLHAPGYGWSHNGPLETFDHSSIRRGYQVYREVCAACHSLDRVAWRTMVGVS 104
++++A+ +H W+H+GP +FD +S+RRGY+VY++VCAACHS+ + +R V
Sbjct: 33 NSVSASGDNVHPYALPWAHSGPFSSFDIASVRRGYEVYKQVCAACHSMKFLHYRHFVDTI 92
Query: 105 HTNAEVRAMAEEFEYDDEPDDQGNPKKRPGKLADYVPGPYPNEQAARAANQGALPPDLSL 164
T E +A A + +D DD+G +RPG L D +P PYPN++AA AAN GA PPDLSL
Sbjct: 93 MTEEEAKAEAADALINDV-DDKGASIQRPGMLTDKLPNPYPNKKAAAAANNGAAPPDLSL 151
Query: 165 IVKARHGGPDYIFALLTGYPEEPPAGVVLPPGANYNPYFPGGSIAMGRVLFDDLVEYEDG 224
+ ARHGG DY+F+LLTGY E P AGV + G YNPYFPGG I+M + LFD+ +EY+DG
Sbjct: 152 MALARHGGDDYVFSLLTGYLEAP-AGVKVDDGKAYNPYFPGGIISMPQQLFDEGIEYKDG 210
Query: 225 TPATTSQMAKDVTTFLHWCSEPEHDERKRLGLKAMIXXXXXXXXXXXXKKFKWASIKSRK 284
TPAT SQ AKDV+ F+HW +EP HD RK+ LK K+ W+ KS+K
Sbjct: 211 TPATMSQQAKDVSAFMHWAAEPFHDTRKKWALKIAALIPFVAVVLIYGKRHIWSFTKSQK 270
Query: 285 IVFNPPK 291
+F K
Sbjct: 271 FLFKTVK 277
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.134 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,572,355
Number of Sequences: 60738
Number of extensions: 871113
Number of successful extensions: 2184
Number of sequences better than 1.0e-05: 9
Number of HSP's better than 0.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2165
Number of HSP's gapped (non-prelim): 9
length of query: 292
length of database: 30,389,216
effective HSP length: 105
effective length of query: 187
effective length of database: 24,011,726
effective search space: 4490192762
effective search space used: 4490192762
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)