ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI4423 good C KOG2404 Energy production and conversion Fumarate reductase, flavoprotein subunit
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI4423 1543422 1541962 -487
(487 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YJR051w [C] KOG2404 Fumarate reductase flavoprotein subunit 561 e-160
YEL047c [C] KOG2404 Fumarate reductase flavoprotein subunit 539 e-153
SPAC17A2.05 [C] KOG2404 Fumarate reductase flavoprotein subunit 293 3e-79
CE01955 [C] KOG2404 Fumarate reductase flavoprotein subunit 256 7e-68
CE03917 [C] KOG2403 Succinate dehydrogenase flavoprotein subunit 97 5e-20
CE16895 [C] KOG2403 Succinate dehydrogenase flavoprotein subunit 94 4e-19
Hs4759080 [C] KOG2403 Succinate dehydrogenase flavoprotein subunit 91 5e-18
Hs16157047 [C] KOG2403 Succinate dehydrogenase flavoprotein subunit 91 5e-18
At5g66760 [C] KOG2403 Succinate dehydrogenase flavoprotein subunit 87 4e-17
At2g18450 [C] KOG2403 Succinate dehydrogenase flavoprotein subunit 87 7e-17
YKL148c [C] KOG2403 Succinate dehydrogenase flavoprotein subunit 84 6e-16
SPAC1556.02c [C] KOG2403 Succinate dehydrogenase flavoprotein su... 83 1e-15
7294652 [C] KOG2403 Succinate dehydrogenase flavoprotein subunit 81 4e-15
YJL045w [C] KOG2403 Succinate dehydrogenase flavoprotein subunit 77 4e-14
>YJR051w [C] KOG2404 Fumarate reductase flavoprotein subunit
Length = 501
Score = 561 bits (1446), Expect = e-160
Identities = 284/469 (60%), Positives = 367/469 (77%), Gaps = 10/469 (2%)
Query: 25 NQATMSKPVVVIGSGLAGLTTSTQLV-KFNIPIVLLEKTGSIGGNSIKASSGINGAGTDT 83
+Q +M +PVVVIGSGLAGLTTS +L+ K+ IP+VLL+K SIGGNSIKASSGINGA TDT
Sbjct: 29 DQTSMKQPVVVIGSGLAGLTTSNRLISKYRIPVVLLDKAASIGGNSIKASSGINGAHTDT 88
Query: 84 QEKLKIIDNPELFADDTIKSARGKGIVTLMEKLAKDSANAISWLQTEHQIPLDKLAQLGG 143
Q+ LK++D PELF DT+ SA+G+G+ +LM+KL K+S +AI WLQTE + LD LAQLGG
Sbjct: 89 QQNLKVMDTPELFLKDTLHSAKGRGVPSLMDKLTKESKSAIRWLQTEFDLKLDLLAQLGG 148
Query: 144 HSVSRTHRSSGKLPPGFQIVDTLKKSLQ---SYGADLVKIQLNSKVIDVKLDENNKVNGV 200
HSV RTHRSSGKLPPGF+IV L K L+ S ++LV+I LNS+V+D++LD V GV
Sbjct: 149 HSVPRTHRSSGKLPPGFEIVQALSKKLKDISSKDSNLVQIMLNSEVVDIELDNQGHVTGV 208
Query: 201 VYEDSEGTHSI-ETNNVVFCTGGFGFNKKLLEKYAPHLVDLPTTNGDQTLGEGQVLLERL 259
VY D G I ++++VVFC+GGFG++K++L++Y+P+L+ LPTTNG QT G+GQ +L +L
Sbjct: 209 VYMDENGNRKIMKSHHVVFCSGGFGYSKEMLKEYSPNLIHLPTTNGKQTTGDGQKILSKL 268
Query: 260 GAKLIDMDQIQVHPTGFVDPNDPESNWKFLAAEALRGLGGILLNPDTGLRFTNELNTRDT 319
GA+LIDMDQ+QVHPTGF+DPND E+NWKFLAAEALRGLGGILL+P TG RFTNEL+TRDT
Sbjct: 269 GAELIDMDQVQVHPTGFIDPNDRENNWKFLAAEALRGLGGILLHPTTGRRFTNELSTRDT 328
Query: 320 VTAAIQSKC--KSQTAWMVMSEDLYGNYKPNLDFYMFKKLVTKTTVADFAK--DLPIDAN 375
VT IQSKC A +VMS+ +Y NY N++FYM K L+ K ++ D + DL A+
Sbjct: 329 VTMEIQSKCPKNDNRALLVMSDKVYENYTNNINFYMSKNLIKKVSINDLIRQYDLQTTAS 388
Query: 376 TLISELVTYSDISKEDQFGRTHRENQFASTLSEDSTIFVGKITPVVHFTMGGAKIDEQSR 435
L++EL +YSD++ +D F R N F +S +ST++VG++TPVVHFTMGG KI+E+S+
Sbjct: 389 ELVTELKSYSDVNTKDTFDRPLIINAFDKDISTESTVYVGEVTPVVHFTMGGVKINEKSQ 448
Query: 436 VLNAEGNPI-ATGIYAAGEVSGGVHGANRLGGSSLLECVVFGRQAARSI 483
V+ + + GI+AAGEVSGGVHGANRLGGSSLLECVVFG+ AA +I
Sbjct: 449 VIKKNSESVLSNGIFAAGEVSGGVHGANRLGGSSLLECVVFGKTAADNI 497
>YEL047c [C] KOG2404 Fumarate reductase flavoprotein subunit
Length = 470
Score = 539 bits (1389), Expect = e-153
Identities = 282/462 (61%), Positives = 347/462 (75%), Gaps = 11/462 (2%)
Query: 32 PVVVIGSGLAGLTTSTQLV-KFNIPIVLLEKTGSIGGNSIKASSGINGAGTDTQEKLKII 90
PVVVIG+GLAGL + +LV K+NIP+ +LEK SIGGNSIKASSGINGA T+TQ I
Sbjct: 5 PVVVIGTGLAGLAAANELVNKYNIPVTILEKASSIGGNSIKASSGINGACTETQRHFHIE 64
Query: 91 DNPELFADDTIKSARGKGIVTLMEKLAKDSANAISWLQTEHQIPLDKLAQLGGHSVSRTH 150
D+P LF DDTIKSA+GKG+ LM KLA DS AI WL+ E + LD LAQLGGHSV+RTH
Sbjct: 65 DSPRLFEDDTIKSAKGKGVQELMAKLANDSPLAIEWLKNEFDLKLDLLAQLGGHSVARTH 124
Query: 151 RSSGKLPPGFQIVDTLKKSLQSYGA---DLVKIQLNSKVIDVKLDENNKVNGVVYEDSEG 207
RSSGKLPPGF+IV L +L+ +LVKI L+SKV+D+ +++ ++ VVYED G
Sbjct: 125 RSSGKLPPGFEIVSALSNNLKKLAETKPELVKINLDSKVVDIH-EKDGSISAVVYEDKNG 183
Query: 208 T-HSIETNNVVFCTGGFGFNKKLLEKYAPHLVDLPTTNGDQTLGEGQVLLERLGAKLIDM 266
H + N+VVFC+GGFGF+K++L++YAP LV+LPTTNG QT G+GQ LL++LGA LIDM
Sbjct: 184 EKHMVSANDVVFCSGGFGFSKEMLKEYAPELVNLPTTNGQQTTGDGQRLLQKLGADLIDM 243
Query: 267 DQIQVHPTGFVDPNDPESNWKFLAAEALRGLGGILLNPDTGLRFTNELNTRDTVTAAIQS 326
DQIQVHPTGF+DPND S+WKFLAAE+LRGLGGILLNP TG RF NEL TRD VTAAIQ
Sbjct: 244 DQIQVHPTGFIDPNDRSSSWKFLAAESLRGLGGILLNPITGRRFVNELTTRDVVTAAIQK 303
Query: 327 KC--KSQTAWMVMSEDLYGNYKPNLDFYMFKKLVTKTTVADFAKD--LPIDANTLISELV 382
C + A +VM E +Y + K NLDFYMFKKLV K T++ + LPI L EL
Sbjct: 304 VCPQEDNRALLVMGEKMYTDLKNNLDFYMFKKLVQKLTLSQVVSEYNLPITVAQLCEELQ 363
Query: 383 TYSDI-SKEDQFGRTHRENQFASTLSEDSTIFVGKITPVVHFTMGGAKIDEQSRVLNAEG 441
TYS +K D GRT N+F S ++ ++ +F+G++TPVVHFTMGGA+I+ +++V+
Sbjct: 364 TYSSFTTKADPLGRTVILNEFGSDVTPETVVFIGEVTPVVHFTMGGARINVKAQVIGKND 423
Query: 442 NPIATGIYAAGEVSGGVHGANRLGGSSLLECVVFGRQAARSI 483
+ G+YAAGEVSGGVHGANRLGGSSLLECVVFGR AA SI
Sbjct: 424 ERLLKGLYAAGEVSGGVHGANRLGGSSLLECVVFGRTAAESI 465
>SPAC17A2.05 [C] KOG2404 Fumarate reductase flavoprotein subunit
Length = 513
Score = 293 bits (751), Expect = 3e-79
Identities = 182/467 (38%), Positives = 266/467 (55%), Gaps = 22/467 (4%)
Query: 34 VVIGSGLAGLTTSTQLVKFNIPIVLLEKTGSIGGNSIKASSGINGAGTDTQEKLKIIDNP 93
+VIG GLAGL+ + ++ ++LL+K + GGNS+KA+SGIN A T Q + D+
Sbjct: 42 IVIGGGLAGLSATNTILDLGGNVLLLDKNTAFGGNSVKAASGINAAPTQLQFDQHVSDSV 101
Query: 94 ELFADDTIKSARGKGIVTLMEKLAKDSANAISWLQTEHQIPLDKLAQLGGHSVSRTHRSS 153
F +D+I SA+ K L+ L S++A+ WL + +D+L++L GHS RTHR +
Sbjct: 102 NTFYNDSILSAKSKAKPELLRTLTSKSSSAVDWLSERFGLQMDQLSRLAGHSEPRTHRGT 161
Query: 154 GK----LPPGFQIVDTLKKSLQSYGADLVKIQLNSKVIDVKLDEN-NKVNGVVYED-SEG 207
P F +VD +K S+ D ++I+ N++V + + N +KV GV Y D S+
Sbjct: 162 HPDYPFKPLAFVLVDQTEKFAASH-PDRLQIKKNARVTRLLTNPNHDKVFGVEYMDLSDK 220
Query: 208 THSIETNNVVFCTGGFG---FNKKLLEKYAPHLVDLPTTNGDQTLGEGQVLLERLGAKLI 264
++ VV TGG+ + LL+ Y P + L TTNG G+G ++ +G +
Sbjct: 221 SNHTVYGPVVLATGGYAADYSDDSLLKLYHPEALSLSTTNGPYCTGDGHKMVMSIGGSTV 280
Query: 265 DMDQIQVHPTGFVDPNDPESNWKFLAAEALRGLGGILLNPDTGLRFTNELNTRDTVTAAI 324
D+D +Q+HPTGFVDP DP + KFLAAEALRG G +LL G RF +EL RD VT +
Sbjct: 281 DLDLVQIHPTGFVDPKDPTALTKFLAAEALRGSGAVLLT-SQGRRFCDELGYRDYVTGEM 339
Query: 325 QSKCKSQTAWMVMSEDLYGNYKPNLDFYMFKKLVTKTTVADFAKDLPIDANTLISELVTY 384
K KS ++V++ + FY FK L+ K + L + L S Y
Sbjct: 340 M-KLKS-PVYLVLNSAAAEEVANFIKFYSFKGLMKKMKAEELCSTLNCTKDELASTFSEY 397
Query: 385 SDISK---EDQFGRTHRENQFAST-LSEDSTIFVGKITPVVHFTMGGAKIDEQSRVLNAE 440
+ +K D+FGR + F T L T VG++ PV+H+TMGG ++D QSRVL+
Sbjct: 398 NRAAKGEIPDEFGRKY----FGKTPLELTDTFTVGEVVPVLHYTMGGVQVDTQSRVLSTN 453
Query: 441 GNPIATGIYAAGEVSGGVHGANRLGGSSLLECVVFGRQAARSIKASL 487
GN + G++AAGE+ GG+HG NRLGGSSLL CVVFGR A + +++
Sbjct: 454 GN-VIDGLFAAGEIVGGIHGENRLGGSSLLACVVFGRLAGQGASSTM 499
>CE01955 [C] KOG2404 Fumarate reductase flavoprotein subunit
Length = 474
Score = 256 bits (653), Expect = 7e-68
Identities = 182/484 (37%), Positives = 260/484 (53%), Gaps = 58/484 (11%)
Query: 33 VVVIGSGLAGLTTSTQLVKFNIPIVLLEKTGSIGGNSIKASSGINGAGTDTQEKLKIIDN 92
VVV+G GLAGL+ S ++ ++L+E G+ GGNS KASSGINGAGT+TQEKL I D+
Sbjct: 11 VVVVGGGLAGLSASLDIINGGGRVILVEGEGNTGGNSAKASSGINGAGTETQEKLGIKDS 70
Query: 93 PELFADDTIKSARGKGIVTLMEKLAKDSANAISWLQTEHQIPLDKLAQLGGHSVSRTH-- 150
PEL DT+ + + L+E LA +SA+A+ +L+ ++ L + GGHSV RTH
Sbjct: 71 PELLVKDTLSAGDSENDKKLVEILAANSADAVEFLRGV-EVDLTDVNLCGGHSVPRTHWI 129
Query: 151 ---RSSGKLPPGFQIVDTLKKSL---QSYGADLVKIQLNSKVIDVKLDENNKVNGV-VYE 203
+ +P GF+I+ L+ L QS + K+ +K++ + L EN KV+G+ +
Sbjct: 130 PSPKEGRPIPAGFEIMKRLRTRLNEKQSENPEAFKLLTQTKMVGI-LRENGKVSGIEIVT 188
Query: 204 DSEGTHS-IETNNVVFCTGGFGFNKKLLEKYAPHLVDLPTTNGDQTLGEGQVLLERLGAK 262
+ G S I + V+ TGGF ++ LL+++ + PTTNG G+ +
Sbjct: 189 SASGEKSKIIGDAVILATGGFSADETLLKEFGAEIFGFPTTNGAFAKGDDSSYSVCRSKR 248
Query: 263 LIDMDQIQVHPTGFVDPNDPESNWKFLAAEALRGLGGILLNPDTGLRFTNELNTRDTVTA 322
I S K LAAEA+RG G +L+N G RF NEL RD +T
Sbjct: 249 SI-------------------SRNKVLAAEAIRGKGALLIN-SKGQRFGNELGRRDYLTG 288
Query: 323 AIQSKCK------------SQTAWMVMSE---DLYGNYKPNLDFY-MFKKLVTK-TTVAD 365
I + A M+M+E + +G +P +FY + KK K A+
Sbjct: 289 KILELAEPIEESFQGGSAGRNAAIMIMNEANVEAFG--RPAFNFYSIVKKFFAKYENSAE 346
Query: 366 FAKDLPIDANTLISELVTYS---DISKEDQFGRTHRENQFASTLSEDSTIFVGKITPVVH 422
AK L ID + + + L Y D ED FG+ S +S I+ + P +H
Sbjct: 347 LAKALGIDESAIKTTLEEYQKSFDGKSEDPFGKKVFP---VSAISPTEPIYAAIVVPAIH 403
Query: 423 FTMGGAKIDEQSRVLNAEGNPIATGIYAAGEVSGGVHGANRLGGSSLLECVVFGRQAARS 482
+TMGG KIDE +RV++ G PI G++AAGEV+GGVHG+NRL G+SLLECVVFGR A +S
Sbjct: 404 YTMGGLKIDEATRVIDEHGKPI-VGLFAAGEVTGGVHGSNRLAGNSLLECVVFGRIAGKS 462
Query: 483 IKAS 486
S
Sbjct: 463 AAQS 466
>CE03917 [C] KOG2403 Succinate dehydrogenase flavoprotein subunit
Length = 646
Score = 97.1 bits (240), Expect = 5e-20
Identities = 122/474 (25%), Positives = 183/474 (37%), Gaps = 90/474 (18%)
Query: 34 VVIGSGLAGLTTSTQLVKFNIPIVLLEKTGSIGGNSIKASSGINGAGTDTQEKLKIIDNP 93
VV+G+G AGL + L + + ++ K +++ A GIN A + DN
Sbjct: 46 VVVGAGGAGLRAAMGLAEGGLKTAVITKLFPTRSHTVAAQGGINAALGNMNP-----DNW 100
Query: 94 ELFADDTIKSARGKGIVTLMEKLAKDSANAISWLQTEHQIPLD-----KLAQLGGHSVSR 148
DT+K + G + + +++ A+ L+ + +P K+ Q S
Sbjct: 101 RWHFYDTVKGSDWLGDQDAIHYMTREAERAVIELEN-YGMPFSRTTDGKIYQRAFGGQSN 159
Query: 149 THRSSGKLPPGFQIVDTLKKSLQS--YGADLVKIQLNSKVIDVKLD---ENNKVNGVVYE 203
G+ + D SL YGA L + N V LD EN GV+
Sbjct: 160 DFGRGGQAHRTCCVADRTGHSLLHTLYGASL-QYNCNYFVEYFALDLIMENGVCVGVIAM 218
Query: 204 DSE-GT-HSIETNNVVFCTGGFGFNKKLLEKYAPHLVDLPTTNGDQTLGEGQVLLERLGA 261
D E GT H + N V TGG+G T+ G+G L R G
Sbjct: 219 DLEDGTIHRFRSKNTVLATGGYG------------RAFFSCTSAHTCTGDGTALTARAGI 266
Query: 262 KLIDMDQIQVHPTGFVDPNDPESNWKFLAAEALRGLGGILLNPDTGLRFTNELNTRDTVT 321
DM+ +Q HPTG L E RG GG L+N G RF
Sbjct: 267 NNSDMEFVQFHPTGIYGAG-------CLITEGSRGEGGYLVN-SAGERFMER-------- 310
Query: 322 AAIQSKCKSQTAWMVMSEDLYGNYKPNLDFYMFKKLVTKTTVADFAKDLPIDANTLISEL 381
Y PN + +V+++ + + + + L
Sbjct: 311 -----------------------YAPNAKDLASRDVVSRSMTVEIMEGRGVGPDKDHIYL 347
Query: 382 VTYSDISKEDQFGRTHRENQFASTLSEDSTIFVG--------KITPVVHFTMGGAKIDEQ 433
+ +++ Q Q +SE + IF G + P VH+ MGG + +
Sbjct: 348 QLHHLPAEQLQ--------QRLPGISETAMIFAGVDVTKEPIPVIPTVHYNMGGVPTNYK 399
Query: 434 SRVLN---AEGNPIATGIYAAGEVSG-GVHGANRLGGSSLLECVVFGRQAARSI 483
+VLN +G+ + G+YAAGE VHGANRLG +SLL+ V+FGR A I
Sbjct: 400 GQVLNYTPKKGDEVVPGLYAAGECGAHSVHGANRLGANSLLDLVIFGRACAIDI 453
>CE16895 [C] KOG2403 Succinate dehydrogenase flavoprotein subunit
Length = 640
Score = 94.4 bits (233), Expect = 4e-19
Identities = 121/468 (25%), Positives = 183/468 (38%), Gaps = 78/468 (16%)
Query: 34 VVIGSGLAGLTTSTQLVKFNIPIVLLEKTGSIGGNSIKASSGINGAGTDTQEKLKIIDNP 93
VV+G+G AGL + L + + ++ K +++ A G+N A + DN
Sbjct: 39 VVVGAGGAGLRAAMGLSEGGMKTAVITKLFPTRSHTVAAQGGVNAALGNMNP-----DNW 93
Query: 94 ELFADDTIKSARGKGIVTLMEKLAKDSANAISWLQTEHQIPLD-----KLAQLGGHSVSR 148
DT+K + G + + +++ AI L+ + +P K+ Q S
Sbjct: 94 RWHFYDTVKGSDWLGDQDAIHYMTREAERAIIELEN-YGMPFSRTTDGKIYQRAFGGQSN 152
Query: 149 THRSSGKLPPGFQIVDTLKKSLQS--YGADLVKIQLNSKVIDVKLD---ENNKVNGVVYE 203
G+ + D SL YGA L + N V LD + K GVV
Sbjct: 153 DFGRGGQAHRTCCVADRTGHSLLHTLYGASL-QYDCNYFVEYFALDLIMDKGKCIGVVAL 211
Query: 204 DSEG--THSIETNNVVFCTGGFGFNKKLLEKYAPHLVDLPTTNGDQTLGEGQVLLERLGA 261
D E H N V TGG+G T+ G+G L R G
Sbjct: 212 DIETGQIHRFRAKNTVLATGGYG------------RAYFSCTSAHTCTGDGTALTARAGI 259
Query: 262 KLIDMDQIQVHPTGFVDPNDPESNWKFLAAEALRGLGGILLNPDTGLRFTNEL--NTRDT 319
+ DM+ +Q HPTG L E RG GG L+N G RF N +D
Sbjct: 260 RNSDMEFVQFHPTGIYGVG-------CLITEGSRGEGGYLVNSQ-GERFMERYAPNAKDL 311
Query: 320 VTAAIQSKCKSQTAWMVMSEDLYGNYKPNLDFYMFKKLVTKTTVADFAKDLPIDANTLIS 379
+ + S+ M M + PN D + + + LP + T +
Sbjct: 312 ASRDVVSRA------MTMEINEGRGVGPNKDHIYLQ--LHHLPAEQLQQRLPGISET--A 361
Query: 380 ELVTYSDISKEDQFGRTHRENQFASTLSEDSTIFVGKITPVVHFTMGGAKIDEQSRVLNA 439
++ D++KE + P VH+ MGG + + +VL+
Sbjct: 362 QIFAGVDVTKEPI-----------------------PVIPTVHYNMGGVPTNYKGQVLDF 398
Query: 440 E---GNPIATGIYAAGEVSG-GVHGANRLGGSSLLECVVFGRQAARSI 483
G+ + G+YAAGE + VHGANRLG +SLL+ V+FGR A +I
Sbjct: 399 TPEGGDKVIPGLYAAGECAAHSVHGANRLGANSLLDLVIFGRSCALTI 446
>Hs4759080 [C] KOG2403 Succinate dehydrogenase flavoprotein subunit
Length = 664
Score = 90.5 bits (223), Expect = 5e-18
Identities = 121/483 (25%), Positives = 188/483 (38%), Gaps = 103/483 (21%)
Query: 34 VVIGSGLAGLTTSTQLVKFNIPIVLLEKTGSIGGNSIKASSGINGAGTDTQEKLKIIDNP 93
VV+G+G AGL + L + + K +++ A GIN A + +E DN
Sbjct: 65 VVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEE-----DNW 119
Query: 94 ELFADDTIKSARGKGIVTLMEKLAKDSANAISWLQTEHQIPLDKLAQ-------LGGHSV 146
DT+K + G + + + + A+ L+ + +P + GG S+
Sbjct: 120 RWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELEN-YGMPFSRTEDGKIYQRAFGGQSL 178
Query: 147 S-----RTHRSSGKLP-PGFQIVDTLK-KSLQ---SYGADLVKIQLNSKVIDVKLDENNK 196
+ HR G ++ TL +SL+ SY + + L L EN +
Sbjct: 179 KFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDL--------LMENGE 230
Query: 197 VNGVV---YEDSEGTHSIETNNVVFCTGGFGFNKKLLEKYAPHLVDLPTTNGDQTLGEGQ 253
GV+ ED H I N V TGG+G T+ + G+G
Sbjct: 231 CRGVIALCIEDGS-IHRIRAKNTVVATGGYGRTY------------FSCTSAHTSTGDGT 277
Query: 254 VLLERLGAKLIDMDQIQVHPTGFVDPNDPESNWKFLAAEALRGLGGILLNPDTGLRF--- 310
++ R G D++ +Q HPTG L E RG GGIL+N G RF
Sbjct: 278 AMITRAGLPCQDLEFVQFHPTGIYGAG-------CLITEGCRGEGGILIN-SQGERFMER 329
Query: 311 ----TNELNTRDTVTAAIQSKCKSQTAWMVMSEDLYGNYKPNLDFYMFKKLVTKTTVADF 366
+L +RD V+ ++ + + + +Y L + T +
Sbjct: 330 YAPVAKDLASRDVVSRSMTLEIREGRGCGPEKDHVY------LQLHHLPPEQLATRLPGI 383
Query: 367 AKDLPIDANTLISELVTYSDISKEDQFGRTHRENQFASTLSEDSTIFVGKITPVVHFTMG 426
++ I A D++KE + P VH+ MG
Sbjct: 384 SETAMIFAGV---------DVTKEPI-----------------------PVLPTVHYNMG 411
Query: 427 GAKIDEQSRVLNAEG--NPIATGIYAAGEVS-GGVHGANRLGGSSLLECVVFGRQAARSI 483
G + + +VL + I G+YA GE + VHGANRLG +SLL+ VVFGR A SI
Sbjct: 412 GIPTNYKGQVLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSI 471
Query: 484 KAS 486
+ S
Sbjct: 472 EES 474
>Hs16157047 [C] KOG2403 Succinate dehydrogenase flavoprotein subunit
Length = 664
Score = 90.5 bits (223), Expect = 5e-18
Identities = 121/483 (25%), Positives = 188/483 (38%), Gaps = 103/483 (21%)
Query: 34 VVIGSGLAGLTTSTQLVKFNIPIVLLEKTGSIGGNSIKASSGINGAGTDTQEKLKIIDNP 93
VV+G+G AGL + L + + K +++ A GIN A + +E DN
Sbjct: 65 VVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEE-----DNW 119
Query: 94 ELFADDTIKSARGKGIVTLMEKLAKDSANAISWLQTEHQIPLDKLAQ-------LGGHSV 146
DT+K + G + + + + A+ L+ + +P + GG S+
Sbjct: 120 RWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELEN-YGMPFSRTEDGKIYQRAFGGQSL 178
Query: 147 S-----RTHRSSGKLP-PGFQIVDTLK-KSLQ---SYGADLVKIQLNSKVIDVKLDENNK 196
+ HR G ++ TL +SL+ SY + + L L EN +
Sbjct: 179 KFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDL--------LMENGE 230
Query: 197 VNGVV---YEDSEGTHSIETNNVVFCTGGFGFNKKLLEKYAPHLVDLPTTNGDQTLGEGQ 253
GV+ ED H I N V TGG+G T+ + G+G
Sbjct: 231 CRGVIALCIEDGS-IHRIRAKNTVVATGGYGRTY------------FSCTSAHTSTGDGT 277
Query: 254 VLLERLGAKLIDMDQIQVHPTGFVDPNDPESNWKFLAAEALRGLGGILLNPDTGLRF--- 310
++ R G D++ +Q HPTG L E RG GGIL+N G RF
Sbjct: 278 AMITRAGLPCQDLEFVQFHPTGIYGAG-------CLITEGCRGEGGILIN-SQGERFMER 329
Query: 311 ----TNELNTRDTVTAAIQSKCKSQTAWMVMSEDLYGNYKPNLDFYMFKKLVTKTTVADF 366
+L +RD V+ ++ + + + +Y L + T +
Sbjct: 330 YAPVAKDLASRDVVSRSMTLEIREGRGCGPEKDHVY------LQLHHLPPEQLATRLPGI 383
Query: 367 AKDLPIDANTLISELVTYSDISKEDQFGRTHRENQFASTLSEDSTIFVGKITPVVHFTMG 426
++ I A D++KE + P VH+ MG
Sbjct: 384 SETAMIFAGV---------DVTKEPI-----------------------PVLPTVHYNMG 411
Query: 427 GAKIDEQSRVLNAEG--NPIATGIYAAGEVS-GGVHGANRLGGSSLLECVVFGRQAARSI 483
G + + +VL + I G+YA GE + VHGANRLG +SLL+ VVFGR A SI
Sbjct: 412 GIPTNYKGQVLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSI 471
Query: 484 KAS 486
+ S
Sbjct: 472 EES 474
>At5g66760 [C] KOG2403 Succinate dehydrogenase flavoprotein subunit
Length = 634
Score = 87.4 bits (215), Expect = 4e-17
Identities = 111/484 (22%), Positives = 189/484 (38%), Gaps = 109/484 (22%)
Query: 34 VVIGSGLAGLTTSTQLVKFNIPIVLLEKTGSIGGNSIKASSGINGAGTDTQEKLKIIDNP 93
VV+G+G AGL + L + + K +++ A GIN A + E D+
Sbjct: 53 VVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMSE-----DDW 107
Query: 94 ELFADDTIKSARGKGIVTLMEKLAKDSANAISWLQTEHQIPLDKLAQ-------LGGHSV 146
DT+K + G ++ + +++ A+ L+ + +P + + GG S+
Sbjct: 108 RWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELEN-YGLPFSRTEEGKIYQRAFGGQSL 166
Query: 147 S-----RTHRSSGKLP-PGFQIVDTLKKSLQSYGADLVKIQLNSKVIDVKLDENNKVNGV 200
+ +R + G ++ TL + + +D+ + + GV
Sbjct: 167 DFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFF---VEYFALDLLMASDGSCQGV 223
Query: 201 VYEDSE-GT-HSIETNNVVFCTGGFGFNKKLLEKYAPHLVDLPTTNGDQTLGEGQVLLER 258
+ + E GT H ++ + TGG+G T+ G+G ++ R
Sbjct: 224 IALNMEDGTLHRFRSSQTILATGGYG------------RAYFSATSAHTCTGDGNAMVAR 271
Query: 259 LGAKLIDMDQIQVHPTGFVDPNDPESNWKFLAAEALRGLGGILLNPDTGLRF-------T 311
G L D++ +Q HPTG L E RG GGIL N + G RF
Sbjct: 272 AGLPLQDLEFVQFHPTGIYGAG-------CLITEGSRGEGGILRNSE-GERFMERYAPTA 323
Query: 312 NELNTRDTVTAAIQSKCKSQTAWMVMSEDLYGNYKPNLDFYMFKKLVTKTTVADFAKDLP 371
+L +RD V+ ++ + + G +K ++ ++ LP
Sbjct: 324 KDLASRDVVSRSMTMEIREGRG--------VGPHKDHIYLHL--------------NHLP 361
Query: 372 IDANTLISELVTYSDISKEDQFGRTHRENQFASTLSEDSTIFVG--------KITPVVHF 423
++ KE G +SE + IF G + P VH+
Sbjct: 362 -------------PEVLKERLPG-----------ISETAAIFAGVDVTKEPIPVLPTVHY 397
Query: 424 TMGGAKIDEQSRVLNAEGNP---IATGIYAAGEVS-GGVHGANRLGGSSLLECVVFGRQA 479
MGG + V+ +G+ + G+ AAGE + VHGANRLG +SLL+ VVFGR
Sbjct: 398 NMGGIPTNYHGEVVTIKGDDPDAVIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRAC 457
Query: 480 ARSI 483
A +
Sbjct: 458 ANRV 461
>At2g18450 [C] KOG2403 Succinate dehydrogenase flavoprotein subunit
Length = 632
Score = 86.7 bits (213), Expect = 7e-17
Identities = 110/484 (22%), Positives = 186/484 (37%), Gaps = 109/484 (22%)
Query: 34 VVIGSGLAGLTTSTQLVKFNIPIVLLEKTGSIGGNSIKASSGINGAGTDTQEKLKIIDNP 93
VV+G+G AGL + L + + K +++ A GIN A + +D+
Sbjct: 51 VVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMS-----VDDW 105
Query: 94 ELFADDTIKSARGKGIVTLMEKLAKDSANAISWLQTEHQIPLDKLAQ-------LGGHSV 146
DT+K + G ++ + +++ A+ L+ + +P + GG S+
Sbjct: 106 RWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELEN-YGLPFSRTEDGKIYQRAFGGQSL 164
Query: 147 S-----RTHRSSGKLP-PGFQIVDTLKKSLQSYGADLVKIQLNSKVIDVKLDENNKVNGV 200
+ +R + G ++ TL + + +D+ ++ + GV
Sbjct: 165 EFGIGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFF---VEYFALDLIMNSDGTCQGV 221
Query: 201 VYEDSE-GT-HSIETNNVVFCTGGFGFNKKLLEKYAPHLVDLPTTNGDQTLGEGQVLLER 258
+ + E GT H + + TGG+G T+ G+G ++ R
Sbjct: 222 IALNMEDGTLHRFHAGSTILATGGYG------------RAYFSATSAHTCTGDGNAMVAR 269
Query: 259 LGAKLIDMDQIQVHPTGFVDPNDPESNWKFLAAEALRGLGGILLNPDTGLRFTN------ 312
G L D++ +Q HPTG L E RG GGIL N + G +F +
Sbjct: 270 AGLPLQDLEFVQFHPTGIYGAG-------CLITEGARGEGGILRNSE-GEKFMDRYAPTA 321
Query: 313 -ELNTRDTVTAAIQSKCKSQTAWMVMSEDLYGNYKPNLDFYMFKKLVTKTTVADFAKDLP 371
+L +RD V+ ++ + + M + LY + LP
Sbjct: 322 RDLASRDVVSRSMTMEIRQGRGAGPMKDYLYL----------------------YLNHLP 359
Query: 372 IDANTLISELVTYSDISKEDQFGRTHRENQFASTLSEDSTIFVG--------KITPVVHF 423
++ KE G +SE + IF G + P VH+
Sbjct: 360 -------------PEVLKERLPG-----------ISETAAIFAGVDVTREPIPVLPTVHY 395
Query: 424 TMGGAKIDEQSRVLNAEGNP---IATGIYAAGEVS-GGVHGANRLGGSSLLECVVFGRQA 479
MGG + V+ G+ + G+ AAGE + VHGANRLG +SLL+ VVFGR
Sbjct: 396 NMGGIPTNYHGEVITLRGDDPDAVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRAC 455
Query: 480 ARSI 483
A +
Sbjct: 456 ANRV 459
>YKL148c [C] KOG2403 Succinate dehydrogenase flavoprotein subunit
Length = 640
Score = 83.6 bits (205), Expect = 6e-16
Identities = 113/479 (23%), Positives = 182/479 (37%), Gaps = 91/479 (18%)
Query: 34 VVIGSGLAGLTTSTQLVKFNIPIVLLEKTGSIGGNSIKASSGINGAGTDTQEKLKIIDNP 93
VVIG+G AGL + L + + K +++ A GIN A + + DN
Sbjct: 56 VVIGAGGAGLRAAFGLAEAGYKTACISKLFPTRSHTVAAQGGINAALGNMHK-----DNW 110
Query: 94 ELFADDTIKSARGKGIVTLMEKLAKDSANAISWLQTEHQ-IPLD-----KLAQLGGHSVS 147
+ DT+K + G + + +++ +I ++ EH +P K+ Q +
Sbjct: 111 KWHMYDTVKGSDWLGDQDSIHYMTREAPKSI--IELEHYGVPFSRTENGKIYQRAFGGQT 168
Query: 148 RTHRSSGKLPPGFQIVDTLKKSLQS--YGADL---VKIQLNSKVIDVKLDENNKVNGVV- 201
+ + + + D +L YG L + +D+ L N +V GV+
Sbjct: 169 KEYGKGAQAYRTCAVADRTGHALLHTLYGQALRHDTHFFIEYFALDL-LTHNGEVVGVIA 227
Query: 202 YEDSEGT-HSIETNNVVFCTGGFGFNKKLLEKYAPHLVDLPTTNGDQTLGEGQVLLERLG 260
Y +GT H + + TGG+G T+ G+G ++ R G
Sbjct: 228 YNQEDGTIHRFRAHKTIIATGGYG------------RAYFSCTSAHTCTGDGNAMVSRAG 275
Query: 261 AKLIDMDQIQVHPTGFVDPNDPESNWKFLAAEALRGLGGILLNPDTGLRF-------TNE 313
L D++ +Q HP+G L E RG GG L+N + G RF +
Sbjct: 276 FPLQDLEFVQFHPSGIYGSG-------CLITEGARGEGGFLVNSE-GERFMERYAPTAKD 327
Query: 314 LNTRDTVTAAIQSKCKSQTAWMVMSEDLYGNYKPNLDFYMFKKLVTKTTVADFAKDLPID 373
L RD V+ AI + + + +Y L V K + ++ I
Sbjct: 328 LACRDVVSRAITMEIREGRGVGKKKDHMY------LQLSHLPPEVLKERLPGISETAAIF 381
Query: 374 ANTLISELVTYSDISKEDQFGRTHRENQFASTLSEDSTIFVGKITPVVHFTMGGAKIDEQ 433
A D++KE I P VH+ MGG
Sbjct: 382 AGV---------DVTKEPI-----------------------PIIPTVHYNMGGIPTKWN 409
Query: 434 SRVLNAEG----NPIATGIYAAGEVSG-GVHGANRLGGSSLLECVVFGRQAARSIKASL 487
L + + + G+ A GE + VHGANRLG +SLL+ VVFGR A ++ +L
Sbjct: 410 GEALTIDEETGEDKVIPGLMACGEAACVSVHGANRLGANSLLDLVVFGRAVAHTVADTL 468
>SPAC1556.02c [C] KOG2403 Succinate dehydrogenase flavoprotein subunit
Length = 641
Score = 82.8 bits (203), Expect = 1e-15
Identities = 117/485 (24%), Positives = 181/485 (37%), Gaps = 104/485 (21%)
Query: 34 VVIGSGLAGLTTSTQLVKFNIPIVLLEKTGSIGGNSIKASSGINGA-GTDTQEKLKIIDN 92
+V+G+G AGL + L + + K +++ A GIN A G T+ D+
Sbjct: 58 IVVGAGGAGLRATFGLAEAGFNTACITKLFPTRSHTVAAQGGINAALGNMTK------DD 111
Query: 93 PELFADDTIKSARGKGIVTLMEKLAKDSANAISWLQTEH-QIPLDKLAQ-------LGGH 144
DT+K + G + + K++ A+ L+ EH +P + + GG
Sbjct: 112 WRWHFYDTVKGSDWLGDQDAIHYMTKEAPKAV--LELEHFGVPFSRTKEGKIYQRAFGGQ 169
Query: 145 SVSRTHRSSGKLPPGFQIVDTLKKSLQS--YGADLVKIQLNSKVIDVKLD---ENNKVNG 199
S+ + G+ + D S+ YG L K N + +D E + G
Sbjct: 170 SLE--YGKGGQAYRCAAVADRTGHSILHTLYGQSL-KHNTNFFIEYFAMDLIMEGGECRG 226
Query: 200 VVYEDSE--GTHSIETNNVVFCTGGFGFNKKLLEKYAPHLVDLPTTNGDQTLGEGQVLLE 257
V+ + E H + + TGG+G T+ G+G ++
Sbjct: 227 VIAMNLEDGSIHRFRAHKTILATGGYG------------RAYFSCTSAHTCTGDGNAMVS 274
Query: 258 RLGAKLIDMDQIQVHPTGFVDPNDPESNWKFLAAEALRGLGGILLNPDTGLRFTNELNTR 317
R G L D++ +Q HPTG L E RG GG L LN++
Sbjct: 275 RAGLPLQDLEFVQFHPTGIYGAG-------CLITEGCRGEGGYL------------LNSK 315
Query: 318 DTVTAAIQSKCKSQTAWMVMSEDLYGNYKPNLDFYMFKKLVTKTTVADFAKDL---PIDA 374
E Y P + +V++ + + P
Sbjct: 316 --------------------GERFMERYAPTAKDLASRDVVSRAMTVEIREGRGVGPEKD 355
Query: 375 NTLISELVTYSDISKEDQFGRTHRENQFASTLSEDSTIFVG--------KITPVVHFTMG 426
+ + ++I KE G +SE + IF G + P VH+ MG
Sbjct: 356 HCYLQLSHLPAEILKERLPG-----------ISETAAIFAGVDVTKEPIPVLPTVHYNMG 404
Query: 427 GAKIDEQSRVLNAEGN---PIATGIYAAGEVSG-GVHGANRLGGSSLLECVVFGRQAARS 482
G VL + N I G+YAAGE + VHG NRLG +SLL+ VVFGR A
Sbjct: 405 GIPTRFTGEVLTIDENGKDKIVPGLYAAGEAACVSVHGGNRLGANSLLDIVVFGRACALH 464
Query: 483 IKASL 487
IK +L
Sbjct: 465 IKDTL 469
>7294652 [C] KOG2403 Succinate dehydrogenase flavoprotein subunit
Length = 525
Score = 80.9 bits (198), Expect = 4e-15
Identities = 80/313 (25%), Positives = 125/313 (39%), Gaps = 70/313 (22%)
Query: 186 VIDVKLDENNKVNGVVYEDSEGT-HSIETNNVVFCTGGFGFNKKLLEKYAPHLVDLPTTN 244
V+D+ + + V + ++ +GT H N V GG G V TT
Sbjct: 82 VLDLIMSQGACVGCLAWKLDDGTFHRFLAKNTVVAAGGCG------------RVYFSTTA 129
Query: 245 GDQTLGEGQVLLERLGAKLIDMDQIQVHPTGFVDPNDPESNWKFLAAEALRGLGGILLNP 304
G G+G + R L+DM+ +Q HPTG L E +RG GG LN
Sbjct: 130 GHTCTGDGNAWVSRQELPLMDMEFVQFHPTGIYGAG-------CLITEGVRGEGGFFLNC 182
Query: 305 DTGLRF-------TNELNTRDTVTAAIQSKCKSQTAWMVMSEDLYGNYKPNLDFYMFKKL 357
G RF +L +RD V A+ + + + + ++ ++D + K+
Sbjct: 183 K-GERFMERYAPKAKDLASRDVVARAMTMEVLAGNGCGPLKDHVHLQLH-HIDAKIIKQR 240
Query: 358 VTKTTVADFAKDLPIDANTLISELVTYSDISKEDQFGRTHRENQFASTLSEDSTIFVGKI 417
+ V + + D++KE +
Sbjct: 241 LPGIMVT--------------ARIFAKVDVTKEPV-----------------------PV 263
Query: 418 TPVVHFTMGGAKIDEQSRVLNAEGN---PIATGIYAAGEVS-GGVHGANRLGGSSLLECV 473
P VH+ MGG D + RV+ + N + G+Y+ GE S VHGANRLG +SLL+ +
Sbjct: 264 LPTVHYNMGGIPTDYKGRVVTIDENGKEQVVKGLYSCGETSCASVHGANRLGANSLLDLI 323
Query: 474 VFGRQAARSIKAS 486
+FGR A I A+
Sbjct: 324 IFGRVCALDIAAN 336
>YJL045w [C] KOG2403 Succinate dehydrogenase flavoprotein subunit
Length = 634
Score = 77.4 bits (189), Expect = 4e-14
Identities = 110/475 (23%), Positives = 177/475 (37%), Gaps = 83/475 (17%)
Query: 34 VVIGSGLAGLTTSTQLVKFNIPIVLLEKTGSIGGNSIKASSGINGAGTDTQEKLKIIDNP 93
VV+G+G AGL + L + L K +++ A GIN A + D+
Sbjct: 50 VVVGAGGAGLRAAFGLAEAGYKTACLSKLFPTRSHTVAAQGGINAALGNMHP-----DDW 104
Query: 94 ELFADDTIKSARGKGIVTLMEKLAKDSANAISWLQTEHQ-IPLDK-----LAQLGGHSVS 147
+ DT+K + G + + +++ ++ ++ EH +P + + Q S
Sbjct: 105 KSHMYDTVKGSDWLGDQDAIHYMTREAPKSV--IELEHYGMPFSRTEDGRIYQRAFGGQS 162
Query: 148 RTHRSSGKLPPGFQIVDTLKKSLQS--YGADL---VKIQLNSKVIDVKLDENNKVNGVV- 201
+ G+ + D ++ YG L + +D+ L N +V GV+
Sbjct: 163 KDFGKGGQAYRTCAVADRTGHAMLHTLYGQALKNNTHFFIEYFAMDL-LTHNGEVVGVIA 221
Query: 202 YEDSEGT-HSIETNNVVFCTGGFGFNKKLLEKYAPHLVDLPTTNGDQTLGEGQVLLERLG 260
Y +GT H + V TGG+G T+ G+G ++ R G
Sbjct: 222 YNQEDGTIHRFRAHKTVIATGGYG------------RAYFSCTSAHTCTGDGNAMVSRAG 269
Query: 261 AKLIDMDQIQVHPTGFVDPNDPESNWKFLAAEALRGLGGILLNPDTGLRFTNELNTRDTV 320
L D++ +Q HP+G L E RG GG LLN + G RF
Sbjct: 270 FPLEDLEFVQFHPSGIYGSG-------CLITEGARGEGGFLLNSE-GERFMER------- 314
Query: 321 TAAIQSKCKSQTAWMVMSEDLYGNYKPNLDFYMFKKLVTKTTVADFAKDLPIDANT---L 377
Y P + +V++ + + N L
Sbjct: 315 ------------------------YAPTAKDLASRDVVSRAITMEIRAGRGVGKNKDHIL 350
Query: 378 ISELVTYSDISKEDQFGRTHRENQFASTLSEDSTIFVGKITPVVHFTMGGAKIDEQSRVL 437
+ ++ KE G + FA D T + P VH+ MGG L
Sbjct: 351 LQLSHLPPEVLKERLPGISETAAVFAGV---DVTQEPIPVLPTVHYNMGGIPTKWTGEAL 407
Query: 438 NAEG----NPIATGIYAAGEVSG-GVHGANRLGGSSLLECVVFGRQAARSIKASL 487
+ + + G+ A GE + VHGANRLG +SLL+ VVFGR A +I +L
Sbjct: 408 TIDEETGEDKVIPGLMACGEAACVSVHGANRLGANSLLDLVVFGRAVANTIADTL 462
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.314 0.134 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,777,049
Number of Sequences: 60738
Number of extensions: 1223215
Number of successful extensions: 2549
Number of sequences better than 1.0e-05: 14
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 2489
Number of HSP's gapped (non-prelim): 26
length of query: 487
length of database: 30,389,216
effective HSP length: 110
effective length of query: 377
effective length of database: 23,708,036
effective search space: 8937929572
effective search space used: 8937929572
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)