ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI4485 good EH KOG1184 Amino acid transport and metabolism Thiamine pyrophosphate-requiring enzyme
r_klactVI4485 good EH KOG1184 Coenzyme transport and metabolism Thiamine pyrophosphate-requiring enzyme
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI4485 1561190 1559457 -578
(578 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YDL080c [EH] KOG1184 Thiamine pyrophosphate-requiring enzyme 381 e-105
YLR044c [EH] KOG1184 Thiamine pyrophosphate-requiring enzyme 339 8e-93
YLR134w [EH] KOG1184 Thiamine pyrophosphate-requiring enzyme 328 1e-89
YGR087c [EH] KOG1184 Thiamine pyrophosphate-requiring enzyme 312 8e-85
SPAC3G9.11c [EH] KOG1184 Thiamine pyrophosphate-requiring enzyme 250 4e-66
YDR380w [EH] KOG1184 Thiamine pyrophosphate-requiring enzyme 190 4e-48
At5g01320 [EH] KOG1184 Thiamine pyrophosphate-requiring enzyme 138 2e-32
At5g54960 [EH] KOG1184 Thiamine pyrophosphate-requiring enzyme 134 3e-31
At4g33070 [EH] KOG1184 Thiamine pyrophosphate-requiring enzyme 132 2e-30
At5g01330 [EH] KOG1184 Thiamine pyrophosphate-requiring enzyme 131 2e-30
SPAC1F8.07c [EH] KOG1184 Thiamine pyrophosphate-requiring enzyme 108 3e-23
SPAC186.09 [EH] KOG1184 Thiamine pyrophosphate-requiring enzyme 102 2e-21
SPAC13A11.06 [EH] KOG1184 Thiamine pyrophosphate-requiring enzyme 66 2e-10
>YDL080c [EH] KOG1184 Thiamine pyrophosphate-requiring enzyme
Length = 609
Score = 381 bits (979), Expect = e-105
Identities = 218/574 (37%), Positives = 332/574 (56%), Gaps = 38/574 (6%)
Query: 16 SYTERYNVAPLIPLPEYLFHRLFQLNCRTVFGVAN-YSTAKLYQAIAASGIQWIQTINQL 74
SYT+RY + I + +YLFHRL QLN T+FG++ +S L + ++W N+L
Sbjct: 4 SYTQRYALPKCIAISDYLFHRLNQLNIHTIFGLSGEFSMPLLDKLYNIPNLRWAGNSNEL 63
Query: 75 NTSFAVDAYGRAIGVSCYVTSESA-ELGHVNGFFGSFCEYVPILQVVVLEQ-SHDLERLI 132
N ++A D Y R G+ C +T+ EL +NG GS+ E+V IL +V + S ++L+
Sbjct: 64 NAAYAADGYSRLKGLGCLITTFGVGELSAINGVAGSYAEHVGILHIVGMPPTSAQTKQLL 123
Query: 133 -------GDVSIFHDVVDDPS--------------EIDSCVRTLFWGKRPVYMGLRSKDA 171
GD ++FH + D + E+D C++ + +RPVYMG+
Sbjct: 124 LHHTLGNGDFTVFHRIASDVACYTTLIIDSELCADEVDKCIKKAWIEQRPVYMGMPVNQV 183
Query: 172 TKLVPSSSLNGNIADKMGIKNTFFQTDTIKRVIDKIIAEVYASSRPLIVVDALIDRYNYN 231
+ S+ LN + D KN D K VI +I++ +Y S P I+VDA R N
Sbjct: 184 NLPIESARLNTPL-DLQLHKN---DPDVEKEVISRILSFIYKSQNPAIIVDACTSRQNLI 239
Query: 232 STIQNFLTETGIPFVTTLMSKGSIDESLPNFVGTFLGTMSQPIVREYMNNADCTLILGCM 291
+ P T M KG+++E+ P F G F G++S P VRE ++ AD +++GCM
Sbjct: 240 EETKELCNRLKFPVFVTPMGKGTVNETDPQFGGVFTGSISAPEVREVVDFADFIIVIGCM 299
Query: 292 IENFKNSYCRFNYKSKNQILLWNDRVKIENNIIPDILLHELLPQLIASLDTTKIVNSRPV 351
+ F S F YK+KN LL++ VK++N PD+ + LL +++A+LD +K+ + +P
Sbjct: 300 LSEFSTSTFHFQYKTKNCALLYSTSVKLKNATYPDLSIKLLLQKILANLDESKL-SYQPS 358
Query: 352 TIPN-MIPRVEPQPVTFLRQEYLWFKMSTWLKQGDVIISESGTSAIGLLQQKFPDNTRLV 410
P+ M+PR P LRQE++W ++S W + GD+II+E+G SA G+ Q +FP NT +
Sbjct: 359 EQPSMMVPRPYPAGNVLLRQEWVWNEISHWFQPGDIIITETGASAFGVNQTRFPVNTLGI 418
Query: 411 SQAIWNSSGYSIGACLG----ILAAYRDMGTLDKHRIILMVGDGSLQFTFQELSTILTHG 466
SQA+W S GY++GACLG + +D KHR+IL +GDG+ Q T QELSTI+ G
Sbjct: 419 SQALWGSVGYTMGACLGAEFAVQEINKDKFPATKHRVILFMGDGAFQLTVQELSTIVKWG 478
Query: 467 FKPYIFVINNQGYTVDRTLNREKTHLNATYFDIQPWELLKLPSLFYSQEYFKRRCMSVGE 526
PYIFV+NNQGY+VDR L+ +A+Y+DIQPW L L +F Y ++ ++VGE
Sbjct: 479 LTPYIFVMNNQGYSVDRFLHHRS---DASYYDIQPWNYLGLLRVFGCTNYETKKIITVGE 535
Query: 527 LNSLLSDKEFNKSDQLKIVELILPSMDVP-VLLD 559
S++SD F +D+++++E++LP DVP LLD
Sbjct: 536 FRSMISDPNFATNDKIRMIEIMLPPRDVPQALLD 569
>YLR044c [EH] KOG1184 Thiamine pyrophosphate-requiring enzyme
Length = 563
Score = 339 bits (869), Expect = 8e-93
Identities = 198/555 (35%), Positives = 317/555 (56%), Gaps = 38/555 (6%)
Query: 27 IPLPEYLFHRLFQLNCRTVFGV-ANYSTAKLYQAIAASGIQWIQTINQLNTSFAVDAYGR 85
I L +YLF RL Q+N TVFG+ +++ + L + G++W N+LN ++A D Y R
Sbjct: 4 ITLGKYLFERLKQVNVNTVFGLPGDFNLSLLDKIYEVEGMRWAGNANELNAAYAADGYAR 63
Query: 86 AIGVSCYVTSESA-ELGHVNGFFGSFCEYVPILQVV-VLEQSHDLERLI-------GDVS 136
G+SC +T+ EL +NG GS+ E+V +L VV V S ++L+ GD +
Sbjct: 64 IKGMSCIITTFGVGELSALNGIAGSYAEHVGVLHVVGVPSISAQAKQLLLHHTLGNGDFT 123
Query: 137 IFH--------------DVVDDPSEIDSCVRTLFWGKRPVYMGLRSKDATKLVPSSSLNG 182
+FH D+ P+EID C+RT + +RPVY+GL + VP+ L
Sbjct: 124 VFHRMSANISETTAMITDIATAPAEIDRCIRTTYVTQRPVYLGLPANLVDLNVPAKLLQT 183
Query: 183 NIADKMGIKNTFFQTDTIKRVIDKIIAEVYASSRPLIVVDALIDRYNYNSTIQNFLTETG 242
I M +K +++ K VID I+A V + P+I+ DA R++ + + + T
Sbjct: 184 PI--DMSLKPNDAESE--KEVIDTILALVKDAKNPVILADACCSRHDVKAETKKLIDLTQ 239
Query: 243 IPFVTTLMSKGSIDESLPNFVGTFLGTMSQPIVREYMNNADCTLILGCMIENFKNSYCRF 302
P T M KGSIDE P + G ++GT+S+P V+E + +AD L +G ++ +F +
Sbjct: 240 FPAFVTPMGKGSIDEQHPRYGGVYVGTLSKPEVKEAVESADLILSVGALLSDFNTGSFSY 299
Query: 303 NYKSKNQILLWNDRVKIENNIIPDILLHELLPQLIASL-DTTKIVNSRPVTIPNMIPRVE 361
+YK+KN + +D +KI N P + + +L +L+ ++ D K +PV +P P
Sbjct: 300 SYKTKNIVEFHSDHMKIRNATFPGVQMKFVLQKLLTTIADAAK--GYKPVAVPARTPANA 357
Query: 362 PQPV-TFLRQEYLWFKMSTWLKQGDVIISESGTSAIGLLQQKFPDNTRLVSQAIWNSSGY 420
P T L+QE++W ++ +L++GDV+I+E+GTSA G+ Q FP+NT +SQ +W S G+
Sbjct: 358 AVPASTPLKQEWMWNQLGNFLQEGDVVIAETGTSAFGINQTTFPNNTYGISQVLWGSIGF 417
Query: 421 SIGACLGILAAYRDMGTLDKHRIILMVGDGSLQFTFQELSTILTHGFKPYIFVINNQGYT 480
+ GA LG A ++ K R+IL +GDGSLQ T QE+ST++ G KPY+FV+NN GYT
Sbjct: 418 TTGATLGAAFAAEEID--PKKRVILFIGDGSLQLTVQEISTMIRWGLKPYLFVLNNDGYT 475
Query: 481 VDRTLNREKTHLNATYFDIQPWELLKLPSLFYSQEYFKRRCMSVGELNSLLSDKEFNKSD 540
+++ ++ K A Y +IQ W+ L L F +++Y R + GE + L DK FN +
Sbjct: 476 IEKLIHGPK----AQYNEIQGWDHLSLLPTFGAKDYETHRVATTGEWDKLTQDKSFNDNS 531
Query: 541 QLKIVELILPSMDVP 555
+++++E++LP D P
Sbjct: 532 KIRMIEIMLPVFDAP 546
>YLR134w [EH] KOG1184 Thiamine pyrophosphate-requiring enzyme
Length = 563
Score = 328 bits (842), Expect = 1e-89
Identities = 182/554 (32%), Positives = 311/554 (55%), Gaps = 36/554 (6%)
Query: 27 IPLPEYLFHRLFQLNCRTVFGV-ANYSTAKLYQAIAASGIQWIQTINQLNTSFAVDAYGR 85
I L +YLF RL Q+NC TVFG+ +++ + L + G++W N+LN ++A D Y R
Sbjct: 4 ITLGKYLFERLSQVNCNTVFGLPGDFNLSLLDKLYEVKGMRWAGNANELNAAYAADGYAR 63
Query: 86 AIGVSCYVTSESA-ELGHVNGFFGSFCEYVPILQVV-VLEQSHDLERLI-------GDVS 136
G+SC +T+ EL +NG GS+ E+V +L VV V S ++L+ GD +
Sbjct: 64 IKGMSCIITTFGVGELSALNGIAGSYAEHVGVLHVVGVPSISSQAKQLLLHHTLGNGDFT 123
Query: 137 IFH--------------DVVDDPSEIDSCVRTLFWGKRPVYMGLRSKDATKLVPSSSLNG 182
+FH D+ + P+EID C+RT + +RPVY+GL + VP+ L
Sbjct: 124 VFHRMSANISETTAMITDIANAPAEIDRCIRTTYTTQRPVYLGLPANLVDLNVPAKLLET 183
Query: 183 NIADKMGIKNTFFQTDTIKRVIDKIIAEVYASSRPLIVVDALIDRYNYNSTIQNFLTETG 242
I + + + + ++ V++ I + P+I+ DA R++ + + + T
Sbjct: 184 PIDLSLKPNDAEAEAEVVRTVVELI----KDAKNPVILADACASRHDVKAETKKLMDLTQ 239
Query: 243 IPFVTTLMSKGSIDESLPNFVGTFLGTMSQPIVREYMNNADCTLILGCMIENFKNSYCRF 302
P T M KG+IDE P + G ++GT+S+P V++ + +AD L +G ++ +F +
Sbjct: 240 FPVYVTPMGKGAIDEQHPRYGGVYVGTLSRPEVKKAVESADLILSIGALLSDFNTGSFSY 299
Query: 303 NYKSKNQILLWNDRVKIENNIIPDILLHELLPQLIASLDTTKIVNSRPVTIPNMIPRVEP 362
+YK+KN + +D +KI N P + + L +L+ ++ + + +PV +P +P +
Sbjct: 300 SYKTKNIVEFHSDHIKIRNATFPGVQMKFALQKLLDAIPEV-VKDYKPVAVPARVPITKS 358
Query: 363 QPV-TFLRQEYLWFKMSTWLKQGDVIISESGTSAIGLLQQKFPDNTRLVSQAIWNSSGYS 421
P T ++QE++W + +L++GD++I+E+GTSA G+ Q FP + + Q +W S G++
Sbjct: 359 TPANTPMKQEWMWNHLGNFLREGDIVIAETGTSAFGINQTTFPTDVYAIVQVLWGSIGFT 418
Query: 422 IGACLGILAAYRDMGTLDKHRIILMVGDGSLQFTFQELSTILTHGFKPYIFVINNQGYTV 481
+GA LG A ++ K R+IL +GDGSLQ T QE+ST++ G KPYIFV+NN GYT+
Sbjct: 419 VGALLGATMAAEELD--PKKRVILFIGDGSLQLTVQEISTMIRWGLKPYIFVLNNNGYTI 476
Query: 482 DRTLNREKTHLNATYFDIQPWELLKLPSLFYSQEYFKRRCMSVGELNSLLSDKEFNKSDQ 541
++ ++ +A Y +IQ W+ L L F ++ Y R + GE L DK+F + +
Sbjct: 477 EKLIHGP----HAEYNEIQGWDHLALLPTFGARNYETHRVATTGEWEKLTQDKDFQDNSK 532
Query: 542 LKIVELILPSMDVP 555
++++E++LP D P
Sbjct: 533 IRMIEVMLPVFDAP 546
>YGR087c [EH] KOG1184 Thiamine pyrophosphate-requiring enzyme
Length = 563
Score = 312 bits (800), Expect = 8e-85
Identities = 194/555 (34%), Positives = 304/555 (53%), Gaps = 38/555 (6%)
Query: 27 IPLPEYLFHRLFQLNCRTVFGV-ANYSTAKLYQAIAASGIQWIQTINQLNTSFAVDAYGR 85
I L +YLF RL Q+N T+FG+ +++ + L + G++W N+LN ++A D Y R
Sbjct: 4 ITLGKYLFERLKQVNVNTIFGLPGDFNLSLLDKIYEVDGLRWAGNANELNAAYAADGYAR 63
Query: 86 AIGVSCYVTSESA-ELGHVNGFFGSFCEYVPILQVV-VLEQSHDLERLI-------GDVS 136
G+S VT+ EL +NG GS+ E+V +L VV V S ++L+ GD +
Sbjct: 64 IKGLSVLVTTFGVGELSALNGIAGSYAEHVGVLHVVGVPSISAQAKQLLLHHTLGNGDFT 123
Query: 137 IFH--------------DVVDDPSEIDSCVRTLFWGKRPVYMGLRSKDATKLVPSSSLNG 182
+FH D+ PSEID +RT F +RP Y+GL + VP S L
Sbjct: 124 VFHRMSANISETTSMITDIATAPSEIDRLIRTTFITQRPSYLGLPANLVDLKVPGSLLEK 183
Query: 183 NIADKMGIKNTFFQTDTIKRVIDKIIAEVYASSRPLIVVDALIDRYNYNSTIQNFLTETG 242
I + +K + K VID ++ + S P+I+ DA R+N Q + T
Sbjct: 184 PI--DLSLKPN--DPEAEKEVIDTVLELIQNSKNPVILSDACASRHNVKKETQKLIDLTQ 239
Query: 243 IPFVTTLMSKGSIDESLPNFVGTFLGTMSQPIVREYMNNADCTLILGCMIENFKNSYCRF 302
P T + KGSIDE P + G ++GT+S+ V++ + +AD L +G ++ +F +
Sbjct: 240 FPAFVTPLGKGSIDEQHPRYGGVYVGTLSKQDVKQAVESADLILSVGALLSDFNTGSFSY 299
Query: 303 NYKSKNQILLWNDRVKIENNIIPDILLHELLPQLIASL-DTTKIVNSRPVTIPNMIPRVE 361
+YK+KN + +D VK++N + + L L+ + D K S PV P P +
Sbjct: 300 SYKTKNVVEFHSDYVKVKNATFLGVQMKFALQNLLKVIPDVVKGYKSVPV--PTKTPANK 357
Query: 362 PQPV-TFLRQEYLWFKMSTWLKQGDVIISESGTSAIGLLQQKFPDNTRLVSQAIWNSSGY 420
P T L+QE+LW ++S +L++GDVIISE+GTSA G+ Q FP + +SQ +W S G+
Sbjct: 358 GVPASTPLKQEWLWNELSKFLQEGDVIISETGTSAFGINQTIFPKDAYGISQVLWGSIGF 417
Query: 421 SIGACLGILAAYRDMGTLDKHRIILMVGDGSLQFTFQELSTILTHGFKPYIFVINNQGYT 480
+ GA LG A ++ R+IL +GDGSLQ T QE+ST++ G KPY+FV+NN GYT
Sbjct: 418 TTGATLGAAFAAEEID--PNKRVILFIGDGSLQLTVQEISTMIRWGLKPYLFVLNNDGYT 475
Query: 481 VDRTLNREKTHLNATYFDIQPWELLKLPSLFYSQEYFKRRCMSVGELNSLLSDKEFNKSD 540
+++ ++ +A Y +IQ W+ L L F +++Y + + GE ++L +D EF K+
Sbjct: 476 IEKLIHGP----HAEYNEIQTWDHLALLPAFGAKKYENHKIATTGEWDALTTDSEFQKNS 531
Query: 541 QLKIVELILPSMDVP 555
++++EL LP D P
Sbjct: 532 VIRLIELKLPVFDAP 546
>SPAC3G9.11c [EH] KOG1184 Thiamine pyrophosphate-requiring enzyme
Length = 570
Score = 250 bits (639), Expect = 4e-66
Identities = 167/563 (29%), Positives = 279/563 (48%), Gaps = 50/563 (8%)
Query: 31 EYLFHRLFQLNCRTVFGVA---NYSTAKLYQAIAASGIQWIQTINQLNTSFAVDAYGRAI 87
EYLF RL QL +++ GV N + L + + +W+ N+LN ++A DAY R
Sbjct: 10 EYLFTRLLQLGIKSILGVPGDFNLALLDLIEKVGDETFRWVGNENELNGAYAADAYARVK 69
Query: 88 GVSCYVTSESA-ELGHVNGFFGSFCEYVPILQVVVLEQS----------HDLERLIGDVS 136
G+S VT+ EL +NGF G++ E +P++ +V + + H L GD
Sbjct: 70 GISAIVTTFGVGELSALNGFAGAYSERIPVVHIVGVPNTKAQATRPLLHHTLGN--GDFK 127
Query: 137 IFHDVVDDPSE------------------IDSCVRTLFWGKRPVYMGLRSKDATKLVPSS 178
+F + + S +++CVRT RPVY+ + S +S
Sbjct: 128 VFQRMSSELSADVAFLDSGDSAGRLIDNLLETCVRT----SRPVYLAVPSDAGYFYTDAS 183
Query: 179 SLNGNIADKMGIKNTFFQTDTIKRVIDKIIAEVYASSRPLIVVDALIDRYNYNSTIQNFL 238
L + + N + + V+ +I+ + S P I+VDA + R++ Q+F+
Sbjct: 184 PLKTPLVFPVPENNKEIEHE----VVSEILELIEKSKNPSILVDACVSRFHIQQETQDFI 239
Query: 239 TETGIPFVTTLMSKGSIDESLPNFVGTFLGTMSQPIVREYMNNADCTLILGCMIENFKNS 298
T P T M K +I+ES P F G ++G++++P ++E + D LI+G + +F +
Sbjct: 240 DATHFPTYVTPMGKTAINESSPYFDGVYIGSLTEPSIKERAESTDLLLIIGGLRSDFNSG 299
Query: 299 YCRFNYKSKNQILLWNDRVKIENNIIPDILLHELLPQLIASLDTTKI-VNSRPVTI-PNM 356
+ + I +D KI + + I + LLP+L A++D + +RPV P
Sbjct: 300 TFTYATPASQTIEFHSDYTKIRSGVYEGISMKHLLPKLTAAIDKKSVQAKARPVHFEPPK 359
Query: 357 IPRVEPQPVTFLRQEYLWFKMSTWLKQGDVIISESGTSAIGLLQQKFPDNTRLVSQAIWN 416
E + ++ W +++L++ DV+ +E+GTS G+L FP + +SQ +W
Sbjct: 360 AVAAEGYAEGTITHKWFWPTFASFLRESDVVTTETGTSNFGILDCIFPKGCQNLSQVLWG 419
Query: 417 SSGYSIGACLGILAAYRDMGTLDKHRIILMVGDGSLQFTFQELSTILTHGFKPYIFVINN 476
S G+S+GA G +D R IL+VGDGSL T QE+S + +G P IFVINN
Sbjct: 420 SIGWSVGAMFGATLGIKD-SDAPHRRSILIVGDGSLHLTVQEISATIRNGLTPIIFVINN 478
Query: 477 QGYTVDRTLNREKTHLNATYFDIQ-PWELLKLPSLFYSQEYFKRRCMSVGELNSLLSDKE 535
+GYT++R ++ L+A Y DI W+ L + ++ S EL L D+E
Sbjct: 479 KGYTIERLIH----GLHAVYNDINTEWDYQNLLKGYGAKNSRSYNIHSEKELLDLFKDEE 534
Query: 536 FNKSDQLKIVELILPSMDVPVLL 558
F K+D +++VE+ +P +D P +L
Sbjct: 535 FGKADVIQLVEVHMPVLDAPRVL 557
>YDR380w [EH] KOG1184 Thiamine pyrophosphate-requiring enzyme
Length = 635
Score = 190 bits (483), Expect = 4e-48
Identities = 154/603 (25%), Positives = 266/603 (43%), Gaps = 73/603 (12%)
Query: 22 NVAPLIPLPEYLFHRLFQLNCRTVFGVANYSTAKLYQ-----AIAASGIQWIQTINQLNT 76
N + IP EY+F RL ++ ++VFGV L + ++ ++G++W+ T N+LN
Sbjct: 20 NRSATIPFGEYIFKRLLSIDTKSVFGVPGDFNLSLLEYLYSPSVESAGLRWVGTCNELNA 79
Query: 77 SFAVDAYGRAIG-VSCYVTSESA-ELGHVNGFFGSFCEYVPILQVVVLEQSHD------- 127
++A D Y R + C +T+ EL +NG GSF E V +L +V + +S D
Sbjct: 80 AYAADGYSRYSNKIGCLITTYGVGELSALNGIAGSFAENVKVLHIVGVAKSIDSRSSNFS 139
Query: 128 ---LERLIGDV----------SIFHDVVDDP---------------SEIDSCVRTLFWGK 159
L L+ + ++HD+V D ++D+ +R ++
Sbjct: 140 DRNLHHLVPQLHDSNFKGPNHKVYHDMVKDRVACSVAYLEDIETACDQVDNVIRDIYKYS 199
Query: 160 RPVYMGLRSKDATKLVPSSSLNGNIADKMGIKNTFFQTDTIKRVIDKIIAEVYASSRPLI 219
+P Y+ + + A V +L + + + +I+KI + +Y+S P I
Sbjct: 200 KPGYIFVPADFADMSVTCDNLVNVPRISQQDCIVYPSENQLSDIINKITSWIYSSKTPAI 259
Query: 220 VVDALIDRYNYNSTIQNFLTETGIPFVTTLMSKGSIDESLPNFVGTFLGTMSQPIVREYM 279
+ D L DRY ++ + + +TGI +T+M K IDES P ++G + G V E+
Sbjct: 260 LGDVLTDRYGVSNFLNKLICKTGIWNFSTVMGKSVIDESNPTYMGQYNGKEGLKQVYEHF 319
Query: 280 NNADCTLILGCMIENFKNSYCRFNYKSKNQILLWN-------DRVKIENNIIPDILLHEL 332
D L G I N + F YK +I+ ++ D + + I +
Sbjct: 320 ELCDLVLHFGVDINEINNGHYTFTYKPNAKIIQFHPNYIRLVDTRQGNEQMFKGINFAPI 379
Query: 333 LPQLIASLDTTKI---VNSRPVTIPNMIPRVEPQ---PVTFLRQEYLWFKMSTWLKQGDV 386
L +L +D +K+ +S N R+E + + Q +L M +L GDV
Sbjct: 380 LKELYKRIDVSKLSLQYDSNVTQYTNETMRLEDPTNGQSSIITQVHLQKTMPKFLNPGDV 439
Query: 387 IISESGTSAIGLLQQKFPDNTRLVSQAIWNSSGYSIGACLGILAAYRDMGTLD------- 439
++ E+G+ + FP + +SQ + S G ++ A LG+ A +D
Sbjct: 440 VVCETGSFQFSVRDFAFPSQLKYISQGFFLSIGMALPAALGVGIAMQDHSNAHINGGNVK 499
Query: 440 ---KHRIILMVGDGSLQFTFQELSTILTHGFKPYIFVINNQGYTVDRTLNREKTHLNATY 496
K R+IL GDG+ Q T QELSTIL + + NN GYT++R + +Y
Sbjct: 500 EDYKPRLILFEGDGAAQMTIQELSTILKCNIPLEVIIWNNNGYTIERAIMGP----TRSY 555
Query: 497 FDIQPWELLKLPSLF--YSQEYFKRRCMSVGELNSLLSD--KEFNKSDQLKIVELILPSM 552
D+ W+ KL F + +Y + +L + K NK ++++E+ L +
Sbjct: 556 NDVMSWKWTKLFEAFGDFDGKYTNSTLIQCPSKLALKLEELKNSNKRSGIELLEVKLGEL 615
Query: 553 DVP 555
D P
Sbjct: 616 DFP 618
>At5g01320 [EH] KOG1184 Thiamine pyrophosphate-requiring enzyme
Length = 603
Score = 138 bits (348), Expect = 2e-32
Identities = 135/561 (24%), Positives = 235/561 (41%), Gaps = 59/561 (10%)
Query: 29 LPEYLFHRLFQLNCRTVFGV-ANYSTAKLYQAIAASGIQWIQTINQLNTSFAVDAYGRAI 87
L +L RL Q VF V +++ L IA + I N+LN +A D Y R+
Sbjct: 43 LGRHLSRRLVQAGVTDVFSVPGDFNLTLLDHLIAEPELNNIGCCNELNAGYAADGYARSR 102
Query: 88 GV-SCYVTSESAELGHVNGFFGSFCEYVPILQVVVLEQSHD------LERLIG------- 133
GV +C VT L +N G++ E +P++ +V S+D L IG
Sbjct: 103 GVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDFGTNRILHHTIGLPDFSQE 162
Query: 134 -----DVSIFHDVV----DDPSEIDSCVRTLFWGKRPVYMGLRSKDATKLVPSSS----- 179
V+ + VV D +ID + T +PVY+ + A P+ +
Sbjct: 163 LRCFQTVTCYQAVVNNLEDAHEQIDKAIATALKESKPVYISISCNLAATPHPTFARDPVP 222
Query: 180 --LNGNIADKMGIKNTFFQTDTIKRVIDKIIAEVYASSRPLIVVDALIDRYNYNSTIQNF 237
L +++ MG++ + ++K + V L V A +
Sbjct: 223 FDLTPRMSNTMGLEAA---VEATLEFLNKAVKPVMVGGPKLRVAKA-------SEAFLEL 272
Query: 238 LTETGIPFVTTLMSKGSIDESLPNFVGTFLGTMSQPIVREYMNNADCTLILGCMIENFKN 297
+G P +KG + E+ P+F+GT+ G +S P E + +AD + G + ++ +
Sbjct: 273 ADASGYPLAVMPSTKGLVPENHPHFIGTYWGAVSTPFCSEIVESADAYIFAGPIFNDYSS 332
Query: 298 SYCRFNYKSKNQILLWNDRVKIENN-IIPDILLHELLPQLIASL--DTTKIVNSRPVTIP 354
K + I++ DRV + N +L+ + +L + + T N + +P
Sbjct: 333 VGYSLLLKKEKAIIVHPDRVVVANGPTFGCVLMSDFFRELAKRVKRNETAYENYERIFVP 392
Query: 355 NMIPRVEPQPVTFLRQEYLWFKMSTWLKQGDVIISESGTSAIGLLQQKFPDNTRLVSQAI 414
P ++ +P LR ++ + L +I+E+G S + K P Q
Sbjct: 393 EGKP-LKCKPGEPLRVNAMFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQ 451
Query: 415 WNSSGYSIGACLGILAAYRDMGTLDKHRIILMVGDGSLQFTFQELSTILTHGFKPYIFVI 474
+ S G+S+GA LG A + R++ +GDGS Q T Q++ST++ +G K IF+I
Sbjct: 452 YGSIGWSVGATLGYAQA------TPEKRVLSFIGDGSFQVTAQDISTMIRNGQKAIIFLI 505
Query: 475 NNQGYTVDRTLNREKTHLNATYFDIQPWELLKLPSLFYSQE--YFKRRCMSVGELNSLLS 532
NN GYT++ ++ + Y I+ W L ++ E + + EL +
Sbjct: 506 NNGGYTIEVEIH------DGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVRYEEELVEAIK 559
Query: 533 DKEFNKSDQLKIVELILPSMD 553
K D L +E+I+ D
Sbjct: 560 TATTEKKDSLCFIEVIVHKDD 580
>At5g54960 [EH] KOG1184 Thiamine pyrophosphate-requiring enzyme
Length = 607
Score = 134 bits (338), Expect = 3e-31
Identities = 121/488 (24%), Positives = 208/488 (41%), Gaps = 51/488 (10%)
Query: 29 LPEYLFHRLFQLNCRTVFGV-ANYSTAKLYQAIAASGIQWIQTINQLNTSFAVDAYGRAI 87
L YL RL ++ VF V +++ L IA ++ I N+LN +A D Y R+
Sbjct: 47 LGRYLARRLVEIGVTDVFSVPGDFNLTLLDHLIAEPNLKLIGCCNELNAGYAADGYARSR 106
Query: 88 GV-SCYVTSESAELGHVNGFFGSFCEYVPILQVVVLEQSHD------LERLIG------- 133
GV +C VT L +N G++ E +P++ +V S+D L IG
Sbjct: 107 GVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFTQE 166
Query: 134 -----DVSIFHDVVDDPSE----IDSCVRTLFWGKRPVYMGLRSKDATKLVPSSS----- 179
V+ F V+++ E ID+ + T +PVY+ + +P+ S
Sbjct: 167 LRCFQAVTCFQAVINNLEEAHELIDTAISTALKESKPVYISISCNLPAIPLPTFSRHPVP 226
Query: 180 --LNGNIADKMGIKNTFFQTDTIKRVIDKIIAEVYASSRPLIVVDALIDRYNYNSTIQNF 237
L +++++G+ + ++K + V + V A
Sbjct: 227 FMLPMKVSNQIGLDAA---VEAAAEFLNKAVKPVLVGGPKMRVAKAA-------DAFVEL 276
Query: 238 LTETGIPFVTTLMSKGSIDESLPNFVGTFLGTMSQPIVREYMNNADCTLILGCMIENFKN 297
+G +KG + E +F+GT+ G +S E + +AD L G + ++ +
Sbjct: 277 ADASGYGLAVMPSAKGQVPEHHKHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSS 336
Query: 298 SYCRFNYKSKNQILLWNDRVKIENN-IIPDILLHELLPQLIASL--DTTKIVNSRPVTIP 354
K + I++ DRV I N +L+ + L +L + + T N + +P
Sbjct: 337 VGYSLLLKKEKAIIVQPDRVTIGNGPAFGCVLMKDFLSELAKRIKHNNTSYENYHRIYVP 396
Query: 355 NMIPRVEPQPVTFLRQEYLWFKMSTWLKQGDVIISESGTSAIGLLQQKFPDNTRLVSQAI 414
P + P LR L+ + L +++E+G S + K P+ Q
Sbjct: 397 EGKP-LRDNPNESLRVNVLFQHIQNMLSSESAVLAETGDSWFNCQKLKLPEGCGYEFQMQ 455
Query: 415 WNSSGYSIGACLGILAAYRDMGTLDKHRIILMVGDGSLQFTFQELSTILTHGFKPYIFVI 474
+ S G+S+GA LG A + R+I +GDGS Q T Q++ST++ G K IF+I
Sbjct: 456 YGSIGWSVGATLGYAQA------MPNRRVIACIGDGSFQVTAQDVSTMIRCGQKTIIFLI 509
Query: 475 NNQGYTVD 482
NN GYT++
Sbjct: 510 NNGGYTIE 517
>At4g33070 [EH] KOG1184 Thiamine pyrophosphate-requiring enzyme
Length = 607
Score = 132 bits (331), Expect = 2e-30
Identities = 136/563 (24%), Positives = 233/563 (41%), Gaps = 63/563 (11%)
Query: 29 LPEYLFHRLFQLNCRTVFGV-ANYSTAKLYQAIAASGIQWIQTINQLNTSFAVDAYGRAI 87
L +L RL Q VF V +++ L +A + I N+LN +A D Y R+
Sbjct: 47 LGRHLARRLVQAGVTDVFSVPGDFNLTLLDHLMAEPDLNLIGCCNELNAGYAADGYARSR 106
Query: 88 GV-SCYVTSESAELGHVNGFFGSFCEYVPILQVVVLEQSHD------LERLIG------- 133
GV +C VT L +N G++ E +P++ +V S+D L IG
Sbjct: 107 GVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQE 166
Query: 134 -----DVSIFHDVV----DDPSEIDSCVRTLFWGKRPVYMGLRSKDATKLVPSS------ 178
V+ + VV D +ID + T +PVY+ + A +P
Sbjct: 167 LRCFQTVTCYQAVVNNLDDAHEQIDKAISTALKESKPVYISVSCNLAA--IPHHTFSRDP 224
Query: 179 ---SLNGNIADKMGIKNTFFQTDTIKRVIDKIIAEVYASSRPLIVVDALIDRYNYNSTIQ 235
SL +++KMG++ + ++K + V L V A
Sbjct: 225 VPFSLAPRLSNKMGLEAA---VEATLEFLNKAVKPVMVGGPKLRVAKAC-------DAFV 274
Query: 236 NFLTETGIPFVTTLMSKGSIDESLPNFVGTFLGTMSQPIVREYMNNADCTLILGCMIENF 295
+G +KG + E P+F+GT+ G +S P E + +AD + G + ++
Sbjct: 275 ELADASGYALAMMPSAKGFVPEHHPHFIGTYWGAVSTPFCSEIVESADAYIFAGPIFNDY 334
Query: 296 KNSYCRFNYKSKNQILLWNDRVKIENN-IIPDILLHELLPQLIASL--DTTKIVNSRPVT 352
+ K + I++ DR+ + N IL+ + +L + + T N +
Sbjct: 335 SSVGYSLLLKKEKAIVVQPDRITVANGPTFGCILMSDFFRELSKRVKRNETAYENYHRIF 394
Query: 353 IPNMIPRVEPQPVTFLRQEYLWFKMSTWLKQGDVIISESGTSAIGLLQQKFPDNTRLVSQ 412
+P P ++ + LR ++ + L +I+E+G S + K P Q
Sbjct: 395 VPEGKP-LKCESREPLRVNTMFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQ 453
Query: 413 AIWNSSGYSIGACLGILAAYRDMGTLDKHRIILMVGDGSLQFTFQELSTILTHGFKPYIF 472
+ S G+S+GA LG A + R++ +GDGS Q T Q++ST+L +G K IF
Sbjct: 454 MQYGSIGWSVGATLGYAQASPEK------RVLAFIGDGSFQVTVQDISTMLRNGQKTIIF 507
Query: 473 VINNQGYTVDRTLNREKTHLNATYFDIQPWELLKLPSLFYSQE--YFKRRCMSVGELNSL 530
+INN GYT++ ++ + Y I+ W L ++ E + + EL
Sbjct: 508 LINNGGYTIEVEIH------DGPYNVIKNWNYTGLVDAIHNGEGNCWTAKVRYEEELVEA 561
Query: 531 LSDKEFNKSDQLKIVELILPSMD 553
++ K D L +E+IL D
Sbjct: 562 ITTATTEKKDCLCFIEVILHKDD 584
>At5g01330 [EH] KOG1184 Thiamine pyrophosphate-requiring enzyme
Length = 592
Score = 131 bits (330), Expect = 2e-30
Identities = 128/554 (23%), Positives = 232/554 (41%), Gaps = 45/554 (8%)
Query: 29 LPEYLFHRLFQLNCRTVFGV-ANYSTAKLYQAIAASGIQWIQTINQLNTSFAVDAYGRAI 87
L +L RL Q +F V +++ + L Q IA + I N+LN +A D Y R+
Sbjct: 32 LGRHLSRRLVQAGVTDIFTVPGDFNLSLLDQLIANPELNNIGCCNELNAGYAADGYARSR 91
Query: 88 GV-SCYVTSESAELGHVNGFFGSFCEYVPILQVVVLEQSHD------LERLIG------- 133
GV +C VT L +N G++ E +P++ +V S+D L IG
Sbjct: 92 GVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDFGTNRILHHTIGLPDFSQE 151
Query: 134 -----DVSIFHDVV----DDPSEIDSCVRTLFWGKRPVYMGLRSKDATKLVPSSSLNGNI 184
V+ + VV D +ID + T +PVY+ + A P+ + +
Sbjct: 152 LRCFQTVTCYQAVVNHLEDAHEQIDKAIATALRESKPVYISISCNLAAIPHPTFA---SY 208
Query: 185 ADKMGIKNTFFQTDTIKRVIDKIIAEVYASSRPLIVVDALIDRYNYNSTIQNFLTETGIP 244
+ D ++ ++ + + + +P++V + +G P
Sbjct: 209 PVPFDLTPRLSNKDCLEAAVEATLEFLNKAVKPVMVGGPKLRVAKARDAFVELADASGYP 268
Query: 245 FVTTLMSKGSIDESLPNFVGTFLGTMSQPIVREYMNNADCTLILGCMIENFKNSYCRFNY 304
+KG + E+ P+F+GT+ G +S E + +AD + G + ++ +
Sbjct: 269 VAVMPSAKGFVPENHPHFIGTYWGAVSTLFCSEIVESADAYIFAGPIFNDYSSVGYSLLL 328
Query: 305 KSKNQILLWNDRVKIENN-IIPDILLHELLPQLIASLDTTKIV--NSRPVTIPNMIPRVE 361
K + I++ D V + N + + E +L + K N + +P P ++
Sbjct: 329 KKEKAIIVHPDSVVVANGPTFGCVRMSEFFRELAKRVKPNKTAYENYHRIFVPEGKP-LK 387
Query: 362 PQPVTFLRQEYLWFKMSTWLKQGDVIISESGTSAIGLLQQKFPDNTRLVSQAIWNSSGYS 421
+P LR ++ + L +I+E+G S + K P Q + S G+S
Sbjct: 388 CKPREPLRINAMFQHIQKMLSNETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWS 447
Query: 422 IGACLGILAAYRDMGTLDKHRIILMVGDGSLQFTFQELSTILTHGFKPYIFVINNQGYTV 481
+GA LG A + R++ +GDGS Q T Q++ST++ +G K IF+INN GYT+
Sbjct: 448 VGATLGYAQA------TPEKRVLSFIGDGSFQVTAQDVSTMIRNGQKTIIFLINNGGYTI 501
Query: 482 DRTLNREKTHLNATYFDIQPWELLKLPSLFYSQE--YFKRRCMSVGELNSLLSDKEFNKS 539
+ ++ + Y I+ W L ++ E + + EL ++ K
Sbjct: 502 EVEIH------DGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVRYEEELVEAINTATLEKK 555
Query: 540 DQLKIVELILPSMD 553
D L +E+I+ D
Sbjct: 556 DSLCFIEVIVHKDD 569
>SPAC1F8.07c [EH] KOG1184 Thiamine pyrophosphate-requiring enzyme
Length = 594
Score = 108 bits (269), Expect = 3e-23
Identities = 114/511 (22%), Positives = 203/511 (39%), Gaps = 69/511 (13%)
Query: 32 YLFHRLFQLNCRTVFGVANYSTAKLYQAIAA-SGIQWIQTINQLNTSFAVDAYGRAIGVS 90
YL RL ++ + F V +L + G+ I N+LN +FA + Y R+ G++
Sbjct: 14 YLAQRLVEIGIKNHFVVPGDYNLRLLDFLEYYPGLSEIGCCNELNCAFAAEGYARSNGIA 73
Query: 91 CYVTSESA-ELGHVNGFFGSFCEYVPILQVVVLEQSHDLE--RLIGDVSIFHD------- 140
C V + S L +G G++ E +P++ V ++DL L+ HD
Sbjct: 74 CAVVTYSVGALTAFDGIGGAYAENLPVILVSGSPNTNDLSSGHLLHHTLGTHDFEYQMEI 133
Query: 141 -------------VVDDPSEIDSCVRTLFWGKRPVYMGLRSKDATKLVP-----SSSLNG 182
D P ID +R +PVY+ + + A + P S+ ++
Sbjct: 134 AKKLTCAAVAIKRAEDAPVMIDHAIRQAILQHKPVYIEIPTNMANQPCPVPGPISAVISP 193
Query: 183 NIADKMGIKNTFFQTDTIKRVIDKIIAEVYASSRPLIVVDALIDRYNYNSTIQNFLTETG 242
I+DK ++ TD +I K +P+++ + S
Sbjct: 194 EISDKESLEKA---TDIAAELISK-------KEKPILLAGPKLRAAGAESAFVKLAEALN 243
Query: 243 IPFVTTLMSKGSIDESLPNFVGTFLGTMSQP-IVREYMNNADCTLILGCMIENFKNSYCR 301
+KG E N+ G + G +S + ++D + G + ++ S
Sbjct: 244 CAAFIMPAAKGFYSEEHKNYAGVYWGEVSSSETTKAVYESSDLVIGAGVLFNDY--STVG 301
Query: 302 FNYKSKNQILLWND--RVKIENNIIPDILLHELLPQLIASLDTTKIVNSRPVTI------ 353
+ ILL +D V I + + + E L L K V+ +P T+
Sbjct: 302 WRAAPNPNILLNSDYTSVSIPGYVFSRVYMAEFLELL------AKKVSKKPATLEAYNKA 355
Query: 354 -PNMIPRVEPQPVTFLRQEYLWFKMSTWLKQGDVIISESGTSAIGLLQQKFPDNTRLVSQ 412
P + +P L + + ++ + + +E+G S LQ K P + +
Sbjct: 356 RPQTVVPKAAEPKAALNRVEVMRQIQGLVDSNTTLYAETGDSWFNGLQMKLPAGAKFEVE 415
Query: 413 AIWNSSGYSIGACLGILAAYRDMGTLDKHRIILMVGDGSLQFTFQELSTILTHGFKPYIF 472
W G+S+ + +G A + R I+MVGDGS Q T QE+S ++ H IF
Sbjct: 416 MQWGHIGWSVPSAMGYAVA------APERRTIVMVGDGSFQLTGQEISQMIRHKLPVLIF 469
Query: 473 VINNQGYTVDRTLNREKTHLNATYFDIQPWE 503
++NN+GYT++ ++ + Y IQ W+
Sbjct: 470 LLNNRGYTIEIQIH------DGPYNRIQNWD 494
>SPAC186.09 [EH] KOG1184 Thiamine pyrophosphate-requiring enzyme
Length = 572
Score = 102 bits (253), Expect = 2e-21
Identities = 106/515 (20%), Positives = 202/515 (38%), Gaps = 54/515 (10%)
Query: 32 YLFHRLFQLNCRTVFGV-ANYSTAKLYQAIAASGIQWIQTINQLNTSFAVDAYGRAIGVS 90
YL RL Q + F V +Y+ L + + ++ + N+LN +FA + Y RA G++
Sbjct: 19 YLAVRLAQAGVKHHFVVPGDYNLGLLDKLQYNNYLEEVNCANELNCAFAAEGYARANGIA 78
Query: 91 -CYVTSESAELGHVNGFFGSFCEYVPILQVVV------LEQSHDLERLIG--DVSIFHDV 141
C VT +G G++ E +P++ + + SH L +G D S +++
Sbjct: 79 ACVVTYSVGAFTAFDGIGGAYAEDLPVILISGSPNTNDIGSSHLLHHTLGTHDFSYQYEM 138
Query: 142 V--------------DDPSEIDSCVRTLFWGKRPVYMGLRSKDATKLVPSSSLNGNIADK 187
+ P ID ++ K+PVY+ + + A++ + I +
Sbjct: 139 AKKITCAAVSIQRPTEAPRLIDYAIKMALLKKKPVYIEVPTNVASQPCAAPGPASLITEP 198
Query: 188 MGIKNTFFQTDTIKRVIDKIIAEVYASSRPLIVVDALIDRYNYNSTIQNFLTETGIPFVT 247
+ Q +D V +P+++ + + S
Sbjct: 199 ETSNQEYLQM-----AVDISAKIVNGKQKPVLLAGPKLRSFKAESAFLELANSLNCSVAV 253
Query: 248 TLMSKGSIDESLPNFVGTFLGTMSQPIVREYMNNADCTLILGCMIENFKNSYCRFNYKSK 307
+K ES PN+ G + G S +N +DC + G ++ ++
Sbjct: 254 MPNAKSFFPESHPNYAGIYWGQASTLGAESIINWSDCIICAGTTFTDYSSNGWTSLPPKA 313
Query: 308 NQILLWNDRVKIENNIIPDILLHELLPQLI-------ASLDTTKIVNSRPVTIPNMIPRV 360
N + + DRV + + +LL + L +L AS+ K + + IP P+
Sbjct: 314 NVLHVDVDRVTVSDAEFGGVLLRDFLHELAKKVKANNASVVEYKRIRPESLEIPMENPKA 373
Query: 361 EPQPVTFLRQEYLWFKMSTWLKQGDVIISESGTSAIGLLQQKFPDNTRLVSQAIWNSSGY 420
+RQ + + Q + ++G S G ++ P+ R + W G+
Sbjct: 374 ALNRKEIIRQ------VQNLVNQETTLFVDTGDSWFGGMRITLPEKARFEIEMQWGHIGW 427
Query: 421 SIGACLGILAAYRDMGTLDKHRIILMVGDGSLQFTFQELSTILTHGFKPYIFVINNQGYT 480
S+ + G K +++ VGDGS Q T QE+S ++ +F+INN+GYT
Sbjct: 428 SVPSAFGYAIG------APKRNVVVFVGDGSFQETVQEVSQMVRLNLPIIMFLINNRGYT 481
Query: 481 VDRTLNREKTHLNATYFDIQPWELLKLPSLFYSQE 515
++ ++ + Y I+ W+ + F + E
Sbjct: 482 IEVEIH------DGPYNRIKNWDYAAIVEAFNAGE 510
>SPAC13A11.06 [EH] KOG1184 Thiamine pyrophosphate-requiring enzyme
Length = 152
Score = 65.9 bits (159), Expect = 2e-10
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 31 EYLFHRLFQLNCRTVFGVA---NYSTAKLYQAIAASGIQWIQTINQLNTSFAVDAYGRAI 87
EYLF RL QL +++ GV N + L + + +W+ N+LN ++A D Y R
Sbjct: 9 EYLFKRLEQLGVKSILGVPGDFNLALLDLIEKVGDEKFRWVGNTNELNGAYAADGYARVN 68
Query: 88 GVSCYVTSES-AELGHVNGFFGSFCEYVPILQVV 120
G+S VT+ EL +NG GS+ E+VP++ +V
Sbjct: 69 GLSAIVTTFGVGELSAINGVAGSYAEHVPVVHIV 102
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.322 0.138 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,395,709
Number of Sequences: 60738
Number of extensions: 1422797
Number of successful extensions: 3183
Number of sequences better than 1.0e-05: 13
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 3113
Number of HSP's gapped (non-prelim): 13
length of query: 578
length of database: 30,389,216
effective HSP length: 112
effective length of query: 466
effective length of database: 23,586,560
effective search space: 10991336960
effective search space used: 10991336960
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)