ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI4508 good L KOG1361 Replication, recombination and repair Predicted hydrolase involved in interstrand cross-link repair
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI4508 1567507 1569045 513
(513 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YMR137c [L] KOG1361 Predicted hydrolase involved in interstrand ... 236 8e-62
SPAC22A12.01c [L] KOG1361 Predicted hydrolase involved in inters... 212 1e-54
At3g26680 [L] KOG1361 Predicted hydrolase involved in interstran... 184 4e-46
At2g45700_2 [L] KOG1361 Predicted hydrolase involved in interstr... 163 5e-40
At1g66730_1 [L] KOG1361 Predicted hydrolase involved in interstr... 137 5e-32
7296732 [L] KOG1361 Predicted hydrolase involved in interstrand ... 136 7e-32
Hs15298761 [L] KOG1361 Predicted hydrolase involved in interstra... 107 6e-23
Hs12383082 [L] KOG1361 Predicted hydrolase involved in interstra... 93 1e-18
At1g27410 [L] KOG1361 Predicted hydrolase involved in interstran... 93 1e-18
CE10128_2 [L] KOG1361 Predicted hydrolase involved in interstran... 69 1e-11
>YMR137c [L] KOG1361 Predicted hydrolase involved in interstrand cross-link
repair
Length = 661
Score = 236 bits (601), Expect = 8e-62
Identities = 166/462 (35%), Positives = 244/462 (51%), Gaps = 61/462 (13%)
Query: 106 KSEPAVVDKTSRKKS-MAWFKKLSFSD-ITVVVDSFNCDKEPNIDLYFLSHFHADHYGGL 163
K + A K +R K + FK + F++ +VVD FN I YFLSHFH+DHY GL
Sbjct: 198 KRDIATSKKPTRVKLVLPSFKIIKFNNGHEIVVDGFNYKASETISQYFLSHFHSDHYIGL 257
Query: 164 KKSWSHGT------TIYTSVYTANLVKWKFKVNQCKLIGLSLNEWHSVSNEVRVILLDAN 217
KKSW++ T+Y S TA LV KFK+ ++ L +N+ +++ + V+ LDAN
Sbjct: 258 KKSWNNPDENPIKKTLYCSKITAILVNLKFKIPMDEIQILPMNKRFWITDTISVVTLDAN 317
Query: 218 HCPGSVIFLFHDLRRNSF------VLHTGDFRANERIITEVNSLLQ---GNSLSLIYLDT 268
HCPG++I LF + NS+ +LHTGDFR+N ++I + L ++ +YLDT
Sbjct: 318 HCPGAIIMLFQEFLANSYDKPIRQILHTGDFRSNAKMIETIQKWLAETANETIDQVYLDT 377
Query: 269 TYLNPFFKFPALPKVCEVTADFASLLAENGLN-TFLNRSDSQRSISQYLG----LSQTKP 323
TY+ + FP+ VCE ADF L ++G N TF DSQR++ + +
Sbjct: 378 TYMTMGYNFPSQHSVCETVADFTLRLIKHGKNKTF---GDSQRNLFHFQRKKTLTTHRYR 434
Query: 324 ILFVVLSYSIGKEHLAISIAKKLKTQLYV-PHT-KYQLVKQYIS-------WFPEGLLTT 374
+LF+V +Y+IGKE LAI I + LKT+L+V P++ K+ ++ + + E LLT+
Sbjct: 435 VLFLVGTYTIGKEKLAIKICEFLKTKLFVMPNSVKFSMMLTVLQNNENQNDMWDESLLTS 494
Query: 375 DHKSSNVHLVAMHT-----DLDKYLSQLSNM-------FDSIVVFRPTGWT--FSNQYDK 420
+ S+VHLV + ++ YL L + + +V F PTGW+ F +Y K
Sbjct: 495 NLHESSVHLVPIRVLKSQETIEAYLKSLKELETDYVKDIEDVVGFIPTGWSHNFGLKYQK 554
Query: 421 SYTLWDEFERKNWVKDTLS---------GETPFAIDYFTKQKRSQGKIYHFNVPYSEHSS 471
DE E + L E F I +Q + K FNVPYSEHSS
Sbjct: 555 KNDD-DENEMSGNTEYCLELMKNDRDNDDENGFEISSILRQYKKYNKFQVFNVPYSEHSS 613
Query: 472 FKDLCLFSTKLKWDKIIPTVNLS---QYREMARWFEIWKSYK 510
F DL F KLK ++IPTVNL+ + R M WF+ W++ +
Sbjct: 614 FNDLVKFGCKLKCSEVIPTVNLNNLWKVRYMTNWFQCWENVR 655
>SPAC22A12.01c [L] KOG1361 Predicted hydrolase involved in interstrand cross-link
repair
Length = 527
Score = 212 bits (539), Expect = 1e-54
Identities = 144/401 (35%), Positives = 213/401 (52%), Gaps = 50/401 (12%)
Query: 119 KSMAWFKKLSFSDITVVVDSFNCDKEPNIDLYFLSHFHADHYGGLKKSWSHGTTIYTSVY 178
+S+ F KL +I VD+F ++ YFLSHFH+DHYGGL W HG IY S
Sbjct: 147 RSVVPFYKLMPYNIPFAVDAFAYGAIDGVEAYFLSHFHSDHYGGLTPKWKHG-PIYCSEV 205
Query: 179 TANLVKWKFKVNQCKLIGLSLNEWHSVSNEVRVILLDANHCPGSVIFLFHDLRRNSF--V 236
T NL+ V++ + L LN+ +++ + V +LDANHCPGS +F+F L+ N V
Sbjct: 206 TGNLLINVMHVDEQYVKRLKLNQPYNIMG-ITVYVLDANHCPGSAMFVFETLQSNQTRRV 264
Query: 237 LHTGDFRANERIITEVNSLLQGNSLSLIYLDTTYLNPFFKFPALPKVCEVTADFASLLAE 296
LH GDFRA++ + ++ +L+ ++ +YLDTTYLNP + FP V + AD A + +
Sbjct: 265 LHCGDFRASKDHV--MHPVLREKTIHKVYLDTTYLNPKYTFPPQADVVQACADKAISIKK 322
Query: 297 NGLNTFLNRSDSQRSISQYLGLSQTKPILFVVLSYSIGKEHLAISIAKKLKTQLYVPHTK 356
+ +DS+ +L VV +YSIGKE +A++IAK L +++YV K
Sbjct: 323 S--------TDSR--------------LLVVVSTYSIGKEKVAVAIAKSLSSRIYVVPRK 360
Query: 357 YQLVKQYISWFPEGLLTTDHKSSNVHLVAM----HTDLDKYLSQLSNMFDSIVVFRPTGW 412
++KQ + LLT D ++VH+V M L YL Q ++ FD I+ ++ TGW
Sbjct: 361 MHIIKQLENQDLIDLLTDDPTQASVHMVTMMGIHPNSLLDYLEQYNSSFDKIIGYKVTGW 420
Query: 413 TF---SNQYDKSYTLWDEFERKNWVKDTLSGETPFAIDYFTKQKR-SQGKIYHFNVPYSE 468
TF N+ S +L D++ P ++Y + R S K+ F PYSE
Sbjct: 421 TFQPLENRAQLSSSL-----------DSIISRPPKFVEYDLRAIRGSTDKVAAFVAPYSE 469
Query: 469 HSSFKDLCLFSTKLKWDKIIPTVNLSQYR---EMARWFEIW 506
HSSF DL +F + IIPTVN+ R +M W + W
Sbjct: 470 HSSFYDLTMFCLSMNIGHIIPTVNVGSQRSREKMNVWLDRW 510
>At3g26680 [L] KOG1361 Predicted hydrolase involved in interstrand cross-link
repair
Length = 484
Score = 184 bits (466), Expect = 4e-46
Identities = 129/378 (34%), Positives = 197/378 (51%), Gaps = 68/378 (17%)
Query: 123 WFKKLSFSDITVVVDSFNCDKEPNIDLYFLSHFHADHYGGLKKSWSHGTTIYTSVYTANL 182
++KKL + TV D+F YFL+HFHADHY GL K+WSHG IY S T+ L
Sbjct: 147 FYKKLPGTPFTV--DAFRYGCVQGCSAYFLTHFHADHYIGLTKAWSHG-PIYCSSLTSRL 203
Query: 183 VKWKFKVNQCKLIGLSLNEWHSVSNEVRVILLDANHCPGSVIFLFHDLRRNSFVLHTGDF 242
++ VN + L L+ +++ N ++V L++ANHCPG+ + F L + LHTGDF
Sbjct: 204 LRLSLSVNPSSIHPLELDVEYTI-NGIKVTLIEANHCPGAALIHFR-LLDGTCYLHTGDF 261
Query: 243 RANERIITEVNSLLQGNSLSLIYLDTTYLNPFFKFPA----LPKVCEVTADFASLLAENG 298
RA++++ + + LL + ++YLDTTY NP +KFP+ L V +T DF
Sbjct: 262 RASKQM--QTHPLLFNQRVHVLYLDTTYCNPRYKFPSKEDVLSYVVRITKDF-------- 311
Query: 299 LNTFLNRSDSQRSISQYLGLSQTKPILFVVLSYSIGKEHLAISIAKKLKTQLYVPHTKYQ 358
L + L VV SYSIGKE + ++IAK L +++ ++ +
Sbjct: 312 -------------------LRKQPKTLIVVGSYSIGKECVYLAIAKALGVKIFANASRRR 352
Query: 359 LVKQYISWFPEGLLTTDHKSSNVHLVAMHT----DLDKYLSQLSNMFDSIVVFRPTGWTF 414
+++ + L+TD K++ +H++ M + LD++L + +++ FRPTGWT+
Sbjct: 353 ILQSFGWDDISKNLSTDGKATCLHVLPMSSLKVERLDEHLKIYREQYGAVLAFRPTGWTY 412
Query: 415 SNQYDKSYTLWDEFERKNWVKDTLSGETPFAIDYFTKQKRSQGKIYHFNVPYSEHSSFKD 474
S + E + +K T S+GKI + VPYSEHSSF +
Sbjct: 413 SEKIG---------EHLDLIKPT-----------------SRGKITIYGVPYSEHSSFTE 446
Query: 475 LCLFSTKLKWDKIIPTVN 492
L F L+ DKIIPTVN
Sbjct: 447 LREFVQFLRPDKIIPTVN 464
>At2g45700_2 [L] KOG1361 Predicted hydrolase involved in interstrand cross-link
repair
Length = 404
Score = 163 bits (413), Expect = 5e-40
Identities = 118/354 (33%), Positives = 169/354 (47%), Gaps = 75/354 (21%)
Query: 150 YFLSHFHADHYGGLKKSWSHGTTIYTSVYTANLVKWKFKVNQCKLIGLSLNEWHSVSNEV 209
+FL+HFH DHY GL KS+SHG IY S+ TA LV K + +L L L + ++S +
Sbjct: 99 WFLTHFHLDHYQGLTKSFSHGK-IYCSLVTAKLVNMKIGIPWERLQVLDLGQKVNISG-I 156
Query: 210 RVILLDANHCPGSVIFLFHDLRRNSFVLHTGDFRANERIITEVNSLLQGNSLSLIYLDTT 269
V DANHCPGS++ LF + VLHTGDFR +E E+++ L G+ +S + LDTT
Sbjct: 157 DVTCFDANHCPGSIMILFEPANGKA-VLHTGDFRYSE----EMSNWLIGSHISSLILDTT 211
Query: 270 YLNPFFKFPALPKVCEVTADFASLLAENGLNTFLNRSDSQRSISQYLGLSQTKPILFVVL 329
Y NP + FP V + + A N LF++
Sbjct: 212 YCNPQYDFPKQEAVIQFVVEAIQAEAFN------------------------PKTLFLIG 247
Query: 330 SYSIGKEHLAISIAKKLKTQLYVPHTKYQLV------KQYISWFPEGLLTTDHKSSNVHL 383
SY+IGKE L + +A+ L+ ++Y+ K +L+ K I WF T + S++H+
Sbjct: 248 SYTIGKERLFLEVARVLREKIYINPAKLKLLECLGFSKDDIQWF-----TVKEEESHIHV 302
Query: 384 VAMHT-----DLDKYLSQLSNMFDSIVVFRPTGWTFSNQYDKSYTLWDEFERKNWVKDTL 438
V + T L ++ +N + IV F PTGWT KS
Sbjct: 303 VPLWTLASFKRLKHVANRYTNRYSLIVAFSPTGWTSGKTKKKS----------------- 345
Query: 439 SGETPFAIDYFTKQKRSQGKIYHFNVPYSEHSSFKDLCLFSTKLKWDKIIPTVN 492
++ QG I + VPYSEHSSF +L F K+ + IIP+VN
Sbjct: 346 -----------PGRRLQQGTIIRYEVPYSEHSSFTELKEFVQKVSPEVIIPSVN 388
>At1g66730_1 [L] KOG1361 Predicted hydrolase involved in interstrand cross-link
repair
Length = 733
Score = 137 bits (344), Expect = 5e-32
Identities = 109/374 (29%), Positives = 169/374 (45%), Gaps = 75/374 (20%)
Query: 135 VVDSFNCDKEPNIDLYFLSHFHADHYGGLKKSWSHGTTIYTSVYTANLVKWKFKVNQCKL 194
+VD F + + +FLSHFH+DHY GL SWS G IY S TA LV +V +
Sbjct: 66 IVDLFRLPHQSSSVAFFLSHFHSDHYSGLSSSWSKGI-IYCSHKTARLVAEILQVPSQFV 124
Query: 195 IGLSLNEWHSVSNEVRVILLDANHCPGSVIFLFH-DLRRNSF--VLHTGDFRANERIITE 251
L +N+ + V+L++ANHCPG+V FLF L + F +HTGDFR + +
Sbjct: 125 FALPMNQMVKIDGS-EVVLIEANHCPGAVQFLFKVKLESSGFEKYVHTGDFRFCDEM--R 181
Query: 252 VNSLLQGN-SLSLIYLDTTYLNPFFKFPALPKVCEVTADFASLLAENGLNTFLNRSDSQR 310
+ L G ++LDTTY NP F FP+ + +S
Sbjct: 182 FDPFLNGFVGCDGVFLDTTYCNPKFVFPS-------------------------QEESVG 216
Query: 311 SISQYLGLSQTKPILFVVLSYSIGKEHLAISIAKKLKTQLYVPHTKYQLVKQYISWFPEG 370
+ + + +LF+V +Y +GKE + + IA++ K ++ V K ++ + EG
Sbjct: 217 YVVSVIDKISEEKVLFLVATYVVGKEKILVEIARRCKRKIVVDARKMSMLS-VLGCGEEG 275
Query: 371 LLTTDHKSSNVHLVAMHTDLDKYLSQLSNM-----------FDSIVVFRPTGWTFSNQYD 419
+ T D S+VH+V + + + N +D +V F PTGWT+ + +
Sbjct: 276 MFTEDENESDVHVVGWNVLGETWPYFRPNFVKMNEIMVEKGYDKVVGFVPTGWTYEVKRN 335
Query: 420 KSYTLWDEFERKNWVKDTLSGETPFAIDYFTKQKRSQGKIYHFNVPYSEHSSFKDLCLFS 479
K FA+ R + + VPYSEHS++ +L F
Sbjct: 336 K-----------------------FAV-------RFKDSMEIHLVPYSEHSNYDELREFI 365
Query: 480 TKLKWDKIIPTVNL 493
LK ++IPTV +
Sbjct: 366 KFLKPKRVIPTVGV 379
>7296732 [L] KOG1361 Predicted hydrolase involved in interstrand cross-link
repair
Length = 763
Score = 136 bits (343), Expect = 7e-32
Identities = 110/385 (28%), Positives = 183/385 (46%), Gaps = 74/385 (19%)
Query: 136 VDSFNCDKEPNIDLYFLSHFHADHYGGLKKSWSHGTTIYTSVYTANLVKWKFKVNQCKLI 195
VD F + + YFL+HFHADHY GL K + H +Y S +A LV+ K+++ +
Sbjct: 277 VDGFQFGEIEGVTHYFLTHFHADHYIGLTKKFCH--PLYVSPISARLVRTFIKLDETHIH 334
Query: 196 GLSLNEWHSVSNEVRVILLDANHCPGSVIFLFHDLRRNSFVLHTGDFRANERIITEVNSL 255
+ +++ V V+V L+ANHCPG+++F F L +LHTGDFRA+ + +
Sbjct: 335 EIDVDQTLDVDG-VQVTALEANHCPGALMFFF-KLSSGECILHTGDFRASAD-MESLPIF 391
Query: 256 LQGNSLSLIYLDTTYLNPFFKFPALPKVCEVTADFASLLAENGLNTFLNRSDSQRSISQY 315
+++ L+YLDTTY+N + F + + D + FL ++ ++R
Sbjct: 392 WNHSNIDLLYLDTTYMNKNYDFCHQSESVDRAVDL--------VRAFLEKNAAKR----- 438
Query: 316 LGLSQTKPILFVVLSYSIGKEHLAISIAKKLKTQLYVPHTKYQLVKQYISWFP-EGLLTT 374
IL V SY IGKE + +++AK+ +++ + V+ ++W + +LT
Sbjct: 439 --------ILIVCGSYVIGKEKIWLALAKEFTMRVWTESNRSTAVR-CLNWPDLDSVLTE 489
Query: 375 DHKSSNVHLVAM----HTDLDKYLSQLSNMFDSIVVFRPTGWTFSNQYDKSYTLWDEFER 430
D +N+H++AM + L Y ++ + +D ++ RP+GW
Sbjct: 490 DRSGANLHVIAMGKISYPSLVDYFTEFEDQYDMLLGIRPSGW-----------------E 532
Query: 431 KNWVKDTLSGETPFAIDYFTKQKRSQGK-IYHFNVPYSEHSSFKDLCLFSTKLKWDKIIP 489
KN K S GK I + YSEHSS+K+L F LK ++I
Sbjct: 533 KN-------------------SKPSYGKRISTIGIEYSEHSSYKELERFVRFLKPKRVIS 573
Query: 490 TVNLSQYREMARWFEI---WKSYKG 511
TV + R++ E+ W Y+G
Sbjct: 574 TVPVG--RDLYVTGEVPIRWYKYEG 596
>Hs15298761 [L] KOG1361 Predicted hydrolase involved in interstrand cross-link
repair
Length = 866
Score = 107 bits (266), Expect = 6e-23
Identities = 64/154 (41%), Positives = 92/154 (59%), Gaps = 9/154 (5%)
Query: 116 SRKKSMAWFKKLSFSDITVVVDSFNCDKEPNIDLYFLSHFHADHYGGLKKSWSHGTTIYT 175
SRKK+ ++KK+ + TV D+F YFL+HFH+DHY GL K ++ +Y
Sbjct: 696 SRKKTCPFYKKIPGTGFTV--DAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFTF--PVYC 751
Query: 176 SVYTANLVKWKFKVNQCKLIGLSLNEWHSVSNEVRVILLDANHCPGSVIFLFHDLRRNSF 235
S T NL+K K V + + L L+ + N V+V+LLDANHCPG+V+ LF+ L +
Sbjct: 752 SEITGNLLKNKLHVQEQYIHPLPLDT-ECIVNGVKVVLLDANHCPGAVMILFY-LPNGTV 809
Query: 236 VLHTGDFRANERIITEVNSLLQGNSLSLIYLDTT 269
+LHTGDFRA+ + SLL + ++YLDTT
Sbjct: 810 ILHTGDFRADPSM---ERSLLADQKVHMLYLDTT 840
>Hs12383082 [L] KOG1361 Predicted hydrolase involved in interstrand cross-link
repair
Length = 532
Score = 92.8 bits (229), Expect = 1e-18
Identities = 92/365 (25%), Positives = 148/365 (40%), Gaps = 82/365 (22%)
Query: 134 VVVDSFNCDKEPNIDLYFLSHFHADHYGGLKKSWSHGTTIYTSVYTANLVKWKFKVNQCK 193
+ VD ++ + L+FLSH H+DH GL +W+ +Y S TA+L+ +V++
Sbjct: 11 IAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWAR--PLYCSPITAHLLHRHLQVSKQW 68
Query: 194 LIGLSLNEWHSV------SNEVRVILLDANHCPGSVIFLFHDLRRNSFVLHTGDFRANER 247
+ L + E H + + V LLDANHCPGSV+FLF +L+TGDFR
Sbjct: 69 IQALEVGESHVLPLDEIGQETMTVTLLDANHCPGSVMFLFEGY--FGTILYTGDFRYTPS 126
Query: 248 IITEVNSLLQGNSLSLIYLDTTYLNPFFKFPALPKVCEVTADFASLLAENGLNTFLNRSD 307
++ E +L G + +YLD T NP LP E L+ R
Sbjct: 127 MLKE-PALTLGKQIHTLYLDNTNCNPAL---VLPSRQEAAHQIVQLI----------RKH 172
Query: 308 SQRSISQYLGLSQTKPILFVVLSYSIGKEHLAISIAKKLKTQLYVPHTKYQLVKQYISWF 367
Q +I +GL YS+GKE L +A + +T + + + +LV Q +
Sbjct: 173 PQHNIK--IGL------------YSLGKESLLEQLALEFQTWVVLSPRRLELV-QLLGL- 216
Query: 368 PEGLLTTDHKSSNVHLVAMHTDLDKYLSQLSNMFDSIVVFRPTGWTFSNQYDKSYTLWDE 427
+ T + K+ +H V H ++ N + PT + + +
Sbjct: 217 -ADVFTVEEKAGRIHAVD-HMEICHSNMLRWNQTHPTIAILPTSRKIHSSHPDIHV---- 270
Query: 428 FERKNWVKDTLSGETPFAIDYFTKQKRSQGKIYHFNVPYSEHSSFKDLCLFSTKLKWDKI 487
+PYS+HSS+ +L F LK ++
Sbjct: 271 ------------------------------------IPYSDHSSYSELRAFVAALKPCQV 294
Query: 488 IPTVN 492
+P V+
Sbjct: 295 VPIVS 299
>At1g27410 [L] KOG1361 Predicted hydrolase involved in interstrand cross-link
repair
Length = 422
Score = 92.8 bits (229), Expect = 1e-18
Identities = 90/350 (25%), Positives = 160/350 (45%), Gaps = 56/350 (16%)
Query: 150 YFLSHFHADHYGGLKKSWSHGTTIYTSVYTANLVKWKFKVNQCKLIG-LSLNEWHSVS-- 206
YFL+H H+DH GL WS G +Y S TA+L +F L+ + L W S+S
Sbjct: 18 YFLTHIHSDHTRGLSGGWSQG-PLYCSRTTASLFPSRFPGFDLSLLRVVPLFSWTSLSLR 76
Query: 207 -----NEVRVIL--LDANHCPGSVIFLFHDLRRNSF--VLHTGDFR----ANERIITEVN 253
+ VR+ L +DA+HCPGS++FLF R F L+TGDFR A++ T +
Sbjct: 77 SPSSGSTVRLHLMAIDAHHCPGSIMFLF----RGDFGCFLYTGDFRWDSDASDEARTTLV 132
Query: 254 SLLQGNSLSLIYLDTTYLNPFFKFPALPKVCEVTADFASLLAENGLNTFLNRSDSQRSIS 313
+ + + ++YLD TY NP + FP+ ++ AD + + +
Sbjct: 133 AAIDEFPVDILYLDNTYCNPIYSFPSRLVAVQLVADIIASHPSHDI-------------- 178
Query: 314 QYLGLSQTKPILFVVLSYSIGKEHLAISIAKKLKTQLYVPHTKYQLVKQYISWFPEGLLT 373
++ S+GKE L + +++ L +++V +L ++ F + + T
Sbjct: 179 -------------IIAVDSLGKEDLLVHVSRILNIKIWV--WPERLRTMHLLGF-QDIFT 222
Query: 374 TDHKSSNVHLVAMHTDLDKYLSQLSNMFDSIVVFRPTGWTFSNQYDKSYTLWDEFERKNW 433
TD + V V ++ + L L+ M +I + P+G + + K D+ ++
Sbjct: 223 TDTSLTRVRAVPRYSFSIQTLEGLNTMCPTIGIM-PSGLPWVKRPFKG----DDKLSGSF 277
Query: 434 VKDTLSGETPFAIDYFTKQKRSQGKIYHFNVPYSEHSSFKDLCLFSTKLK 483
+ ++ ET A + Y ++V YS+HS ++++ F +K
Sbjct: 278 LTASMKNETVSAKKELEAAAVHKFHDYMYSVHYSDHSCYEEIGEFIKLVK 327
>CE10128_2 [L] KOG1361 Predicted hydrolase involved in interstrand cross-link
repair
Length = 354
Score = 69.3 bits (168), Expect = 1e-11
Identities = 51/145 (35%), Positives = 74/145 (50%), Gaps = 22/145 (15%)
Query: 151 FLSHFHADHYGGLKKSWSHGTTIYTSVYTANLVK--WKFKVNQCKLIGLSLNEWHSVSNE 208
FL+H H+DHY GL K W+ ++Y S TA L+ + + GL +V ++
Sbjct: 49 FLTHAHSDHYRGLDKKWTR--SVYCSPETAKLLPHIMGYTADSPPPAGLINPLEENVPHK 106
Query: 209 ---VRVILLDANHCPGSVIFLFHDLR----RNSFVLHTGDFRANERIITEVNSLLQGNSL 261
+V L++ANHCPG+V+F+F + VL TGDFRA++ + SL GN L
Sbjct: 107 FDSFQVTLVNANHCPGAVMFVFEGSKIEEIAGGAVLCTGDFRADKMFL---ESLKPGNQL 163
Query: 262 --------SLIYLDTTYLNPFFKFP 278
+IYLD TY + FP
Sbjct: 164 HWMTEIKFGIIYLDNTYFSLDMPFP 188
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.133 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,319,311
Number of Sequences: 60738
Number of extensions: 1286699
Number of successful extensions: 3130
Number of sequences better than 1.0e-05: 10
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 3075
Number of HSP's gapped (non-prelim): 15
length of query: 513
length of database: 30,389,216
effective HSP length: 111
effective length of query: 402
effective length of database: 23,647,298
effective search space: 9506213796
effective search space used: 9506213796
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)