ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI4512 suspect: HSP K KOG1601 Transcription GATA-4/5/6 transcription factors
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI4512 1570367 1569195 -391
(391 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YMR136w [K] KOG1601 GATA-4/5/6 transcription factors 98 2e-20
At3g60530 [K] KOG1601 GATA-4/5/6 transcription factors 59 1e-08
At2g45050 [K] KOG1601 GATA-4/5/6 transcription factors 58 3e-08
YCR018c [K] KOG1601 GATA-4/5/6 transcription factors 56 8e-08
YIR013c [K] KOG1601 GATA-4/5/6 transcription factors 54 3e-07
At2g28340 [K] KOG1601 GATA-4/5/6 transcription factors 54 3e-07
At4g32890 [K] KOG1601 GATA-4/5/6 transcription factors 54 4e-07
YLR013w [K] KOG1601 GATA-4/5/6 transcription factors 53 9e-07
At3g51080 [K] KOG1601 GATA-4/5/6 transcription factors 53 9e-07
At3g54810 [K] KOG1601 GATA-4/5/6 transcription factors 51 3e-06
At3g45170 [K] KOG1601 GATA-4/5/6 transcription factors 51 3e-06
ECU02g0260 [K] KOG1601 GATA-4/5/6 transcription factors 51 3e-06
At3g24050 [K] KOG1601 GATA-4/5/6 transcription factors 51 3e-06
At1g08010 [K] KOG1601 GATA-4/5/6 transcription factors 51 3e-06
At5g25830 [K] KOG1601 GATA-4/5/6 transcription factors 50 6e-06
At1g08000 [K] KOG1601 GATA-4/5/6 transcription factors 50 6e-06
At5g66320 [K] KOG1601 GATA-4/5/6 transcription factors 50 7e-06
At4g36240 [K] KOG1601 GATA-4/5/6 transcription factors 49 1e-05
>YMR136w [K] KOG1601 GATA-4/5/6 transcription factors
Length = 560
Score = 97.8 bits (242), Expect = 2e-20
Identities = 41/77 (53%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 298 ESCKHCHETVTPEWRRGPYGNRTLCNACGLFYCKLIRKFNTKDANILMHYRK-MKGPEDR 356
E C HC ET TPEWR+GPYG RTLCNACGLFY K+ +KF +K +N+L+ YR+ + DR
Sbjct: 470 EFCFHCGETETPEWRKGPYGTRTLCNACGLFYRKVTKKFGSKSSNLLLRYRRSIDLANDR 529
Query: 357 RVPESLNVPRSFIESLE 373
R+P+ + +P FI ++
Sbjct: 530 RIPDFITIPNRFIHDMD 546
>At3g60530 [K] KOG1601 GATA-4/5/6 transcription factors
Length = 240
Score = 58.9 bits (141), Expect = 1e-08
Identities = 42/133 (31%), Positives = 55/133 (40%), Gaps = 22/133 (16%)
Query: 221 NVFNVTVRKSEVEIPTAATNTKMEKPVIQVVGHRGSKSDSSIGGTSHTFKVDKVKPRKRN 280
N +TVR E+ + + P V G S+S + V K KP+K
Sbjct: 94 NPLTMTVRP-EISFTGKPRSRRSRAPAPSVAGTWAPMSESEL-----CHSVAKPKPKKVY 147
Query: 281 SVSQQQRMISVAAGDGTESCKHCHETVTPEWRRGPYGNRTLCNACGLFYCKLIRKFNTKD 340
+ SV A DG C HC TP+WR GP G +TLCNACG+ Y K
Sbjct: 148 NAE------SVTA-DGARRCTHCASEKTPQWRTGPLGPKTLCNACGVRY---------KS 191
Query: 341 ANILMHYRKMKGP 353
++ YR P
Sbjct: 192 GRLVPEYRPASSP 204
>At2g45050 [K] KOG1601 GATA-4/5/6 transcription factors
Length = 264
Score = 57.8 bits (138), Expect = 3e-08
Identities = 45/163 (27%), Positives = 57/163 (34%), Gaps = 40/163 (24%)
Query: 198 NQLRNELQKPMTEFQFPMRPRSKNVFNVTVRKSEVEIPTAATNTKMEKPVIQVVGHRGSK 257
N L + TE FP +PRSK +S P A T + M H +K
Sbjct: 96 NPLGGTMTSVKTETSFPGKPRSK--------RSRAPAPFAGTWSPMPLESEHQQLHSAAK 147
Query: 258 SDSSIGGTSHTFKVDKVKPRKRNSVS-------QQQRMISVAAGDGTESCKHCHETVTPE 310
KP+K S Q G G C HC TP+
Sbjct: 148 ----------------FKPKKEQSGGGGGGGGRHQSSSSETTEGGGMRRCTHCASEKTPQ 191
Query: 311 WRRGPYGNRTLCNACGLFYCKLIRKFNTKDANILMHYRKMKGP 353
WR GP G +TLCNACG+ + K ++ YR P
Sbjct: 192 WRTGPLGPKTLCNACGVRF---------KSGRLVPEYRPASSP 225
>YCR018c [K] KOG1601 GATA-4/5/6 transcription factors
Length = 221
Score = 56.2 bits (134), Expect = 8e-08
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 5/125 (4%)
Query: 215 MRPRSKNVFNVTVRKSEVEIPTAATNTKMEKPVIQVVGHRGSKSDSSIGGTSHTFKVDKV 274
++ ++ ++ +T K+ V T+A N++ + G S + GTS + + K
Sbjct: 88 VKNKTSSLNEITPSKNRV---TSACNSERRTTSQEANNLEGYHSCAQ--GTSRSASITKK 142
Query: 275 KPRKRNSVSQQQRMISVAAGDGTESCKHCHETVTPEWRRGPYGNRTLCNACGLFYCKLIR 334
+K S ++++ ++ + C C +T T +WR GP NR LC+ CGL Y K ++
Sbjct: 143 YSKKTTSRPKREKRQTILPNGEIKECSKCKDTWTIQWRSGPDQNRELCSPCGLAYGKRLK 202
Query: 335 KFNTK 339
K N K
Sbjct: 203 KENEK 207
>YIR013c [K] KOG1601 GATA-4/5/6 transcription factors
Length = 121
Score = 54.3 bits (129), Expect = 3e-07
Identities = 30/67 (44%), Positives = 37/67 (54%), Gaps = 2/67 (2%)
Query: 297 TESCKHCHETVTP-EWRRGPYGNRTLCNACGLFYCKLIRKFNTKDANILMHYRKMKGPED 355
T +C C E T +WR GP G LCNACGLF+ KLI +F A M K G +
Sbjct: 50 TRTCGQCGEIKTSLQWREGPNGAACLCNACGLFFRKLILRFGRAAAKRYMEQIKGTGTK- 108
Query: 356 RRVPESL 362
RR+P+ L
Sbjct: 109 RRIPKEL 115
>At2g28340 [K] KOG1601 GATA-4/5/6 transcription factors
Length = 315
Score = 54.3 bits (129), Expect = 3e-07
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 22/88 (25%)
Query: 266 SHTFKVDKVKPRKRNSVSQQQRMISVAAGDGTESCKHCHETVTPEWRRGPYGNRTLCNAC 325
S + ++ +K RK+N + +R+ C HC T TP+WR GP G +TLCNAC
Sbjct: 196 SESSEISALKKRKKN---KSRRL----------KCTHCETTTTPQWREGPNGRKTLCNAC 242
Query: 326 GLFYCKLIRKFNTKDANILMHYRKMKGP 353
G+ + + +++ YR P
Sbjct: 243 GIRF---------RSGRLVLEYRPAASP 261
>At4g32890 [K] KOG1601 GATA-4/5/6 transcription factors
Length = 308
Score = 53.9 bits (128), Expect = 4e-07
Identities = 34/134 (25%), Positives = 52/134 (38%), Gaps = 25/134 (18%)
Query: 225 VTVRKSEVEIPTAATNTKMEKPVIQVVGHRGSKSDSSIGGTSHTFKVDKVKPRKRNSVSQ 284
+ + +S V +P A + + S +DS D+ P+K+ +
Sbjct: 130 IDIDESNVAVPAKARSKRSRSAASTWASRLLSLADS-----------DETNPKKKQRRVK 178
Query: 285 QQRM-----ISVAAGDGTESCKHCHETVTPEWRRGPYGNRTLCNACGLFYCKLIRKFNTK 339
+Q + G C HC TP+WR GP G +TLCNACG+ Y K
Sbjct: 179 EQDFAGDMDVDCGESGGGRRCLHCATEKTPQWRTGPMGPKTLCNACGVRY---------K 229
Query: 340 DANILMHYRKMKGP 353
++ YR P
Sbjct: 230 SGRLVPEYRPASSP 243
>YLR013w [K] KOG1601 GATA-4/5/6 transcription factors
Length = 141
Score = 52.8 bits (125), Expect = 9e-07
Identities = 30/68 (44%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 297 TESCKHCHETVT-PEWRRGPYGNRTLCNACGLFYCKLIRKFNTKDANILMHYRKMKGPE- 354
T C C T P+WR GP G TLCNACGLFY K+ F A ++ ++KG
Sbjct: 69 TRRCPQCAVIKTSPQWREGPDGEVTLCNACGLFYRKIFLVFGKDLAK--RYFNEIKGVSV 126
Query: 355 DRRVPESL 362
R+VP+SL
Sbjct: 127 KRKVPKSL 134
>At3g51080 [K] KOG1601 GATA-4/5/6 transcription factors
Length = 312
Score = 52.8 bits (125), Expect = 9e-07
Identities = 39/138 (28%), Positives = 53/138 (38%), Gaps = 29/138 (21%)
Query: 235 PTAATNTKMEKPVIQVVGHRGSKS--DSSIGGTSHTFKVDK-----------------VK 275
P T K + ++V H GS+S DSS T+ + + K
Sbjct: 140 PAVKTRPKRARTGVRVWSH-GSQSLTDSSSSSTTSSSSSPRPSSPLWLASGQFLDEPMTK 198
Query: 276 PRKRNSVSQQQRMISVAAGDGTESCKHCHETVTPEWRRGPYGNRTLCNACGLFYCKLIRK 335
+K+ V + T C HC TP+WR GP G +TLCNACG+ Y
Sbjct: 199 TQKKKKVWKNAGQTQTQTQTQTRQCGHCGVQKTPQWRAGPLGAKTLCNACGVRY------ 252
Query: 336 FNTKDANILMHYRKMKGP 353
K +L YR P
Sbjct: 253 ---KSGRLLPEYRPACSP 267
>At3g54810 [K] KOG1601 GATA-4/5/6 transcription factors
Length = 322
Score = 51.2 bits (121), Expect = 3e-06
Identities = 23/54 (42%), Positives = 27/54 (49%), Gaps = 9/54 (16%)
Query: 300 CKHCHETVTPEWRRGPYGNRTLCNACGLFYCKLIRKFNTKDANILMHYRKMKGP 353
C HC T TP+WR GP G +TLCNACG+ Y K + YR P
Sbjct: 231 CMHCEVTKTPQWRLGPMGPKTLCNACGVRY---------KSGRLFPEYRPAASP 275
>At3g45170 [K] KOG1601 GATA-4/5/6 transcription factors
Length = 204
Score = 51.2 bits (121), Expect = 3e-06
Identities = 27/78 (34%), Positives = 34/78 (42%), Gaps = 9/78 (11%)
Query: 277 RKRNSVSQQQRMISVAAGDGTESCKHCHETVTPEWRRGPYGNRTLCNACGLFYCKLIRKF 336
+KR S + G +SC HC TP WR GP G TLCNACG+ Y
Sbjct: 94 QKRLSFKSPSDLFDSKFGITDKSCSHCGTRKTPLWREGPRGAGTLCNACGMRY------- 146
Query: 337 NTKDANILMHYRKMKGPE 354
+ +L YR P+
Sbjct: 147 --RTGRLLPEYRPASSPD 162
>ECU02g0260 [K] KOG1601 GATA-4/5/6 transcription factors
Length = 341
Score = 50.8 bits (120), Expect = 3e-06
Identities = 28/72 (38%), Positives = 36/72 (49%), Gaps = 1/72 (1%)
Query: 300 CKHCHETVTPEWRRGPYGNRTLCNACGLFYCKLIRKFNTKDANILMHYRKMKGPEDRRVP 359
C +C T TP WRRG G LCNACGL Y KL + + +KG +R +
Sbjct: 127 CSNCSTTSTPSWRRGDQGKSLLCNACGL-YQKLHGRTRPYTVTAGGRTKALKGGHERIIC 185
Query: 360 ESLNVPRSFIES 371
S N+P +ES
Sbjct: 186 VSCNLPFFTLES 197
>At3g24050 [K] KOG1601 GATA-4/5/6 transcription factors
Length = 274
Score = 50.8 bits (120), Expect = 3e-06
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 11/72 (15%)
Query: 284 QQQRMISVAAGDGT--ESCKHCHETVTPEWRRGPYGNRTLCNACGLFYCKLIRKFNTKDA 341
Q+++ ++VAA C+HC TP+WR GP G +TLCNACG+ Y K
Sbjct: 178 QKKKTMTVAAAALIMGRKCQHCGAEKTPQWRAGPAGPKTLCNACGVRY---------KSG 228
Query: 342 NILMHYRKMKGP 353
++ YR P
Sbjct: 229 RLVPEYRPANSP 240
>At1g08010 [K] KOG1601 GATA-4/5/6 transcription factors
Length = 303
Score = 50.8 bits (120), Expect = 3e-06
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Query: 277 RKRNSVSQQQRMIS----VAAGDG-TESCKHCHETVTPEWRRGPYGNRTLCNACGL 327
+K+ + R +S + DG C HC T TP+WR GP G +TLCNACG+
Sbjct: 194 KKKRKIHLTTRTVSSTLEASNSDGIVRKCTHCETTKTPQWREGPSGPKTLCNACGV 249
>At5g25830 [K] KOG1601 GATA-4/5/6 transcription factors
Length = 331
Score = 50.1 bits (118), Expect = 6e-06
Identities = 26/77 (33%), Positives = 35/77 (44%), Gaps = 14/77 (18%)
Query: 277 RKRNSVSQQQRMISVAAGDGTESCKHCHETVTPEWRRGPYGNRTLCNACGLFYCKLIRKF 336
R++ VS + + G C HC TP+WR GP G +TLCNACG+ Y
Sbjct: 203 RRKKDVSSPE-----SGGAEERRCLHCATDKTPQWRTGPMGPKTLCNACGVRY------- 250
Query: 337 NTKDANILMHYRKMKGP 353
K ++ YR P
Sbjct: 251 --KSGRLVPEYRPAASP 265
>At1g08000 [K] KOG1601 GATA-4/5/6 transcription factors
Length = 308
Score = 50.1 bits (118), Expect = 6e-06
Identities = 21/54 (38%), Positives = 28/54 (50%), Gaps = 9/54 (16%)
Query: 300 CKHCHETVTPEWRRGPYGNRTLCNACGLFYCKLIRKFNTKDANILMHYRKMKGP 353
C HC TP+WR+GP G +TLCNACG+ + K ++ YR P
Sbjct: 220 CTHCETITTPQWRQGPSGPKTLCNACGVRF---------KSGRLVPEYRPASSP 264
>At5g66320 [K] KOG1601 GATA-4/5/6 transcription factors
Length = 339
Score = 49.7 bits (117), Expect = 7e-06
Identities = 23/54 (42%), Positives = 27/54 (49%), Gaps = 9/54 (16%)
Query: 300 CKHCHETVTPEWRRGPYGNRTLCNACGLFYCKLIRKFNTKDANILMHYRKMKGP 353
C HC TP+WR GP G +TLCNACG+ Y K +L YR P
Sbjct: 251 CSHCGVQKTPQWRAGPMGAKTLCNACGVRY---------KSGRLLPEYRPACSP 295
>At4g36240 [K] KOG1601 GATA-4/5/6 transcription factors
Length = 238
Score = 49.3 bits (116), Expect = 1e-05
Identities = 43/142 (30%), Positives = 55/142 (38%), Gaps = 43/142 (30%)
Query: 214 PMRPRSKNV-FNVTVRKSEVEIPTAATNTKMEKPVIQVVGHRG-SKSDSSIGGTSHTFKV 271
P++PRSK N + E P +T K RG K D+S GG
Sbjct: 110 PVKPRSKRRRTNGRIWSMESPSPLLSTAVARRKK-------RGRQKVDASYGG------- 155
Query: 272 DKVKPRKRNSVSQQQRMISVAAGDGTESCKHCHETVTPEWRRGPYGNRTLCNACGLFYCK 331
V QQQ++ C HC TP+WR GP G +TLCNACG+ +
Sbjct: 156 ----------VVQQQQL--------RRCCSHCGVQKTPQWRMGPLGAKTLCNACGVRF-- 195
Query: 332 LIRKFNTKDANILMHYRKMKGP 353
K +L YR P
Sbjct: 196 -------KSGRLLPEYRPACSP 210
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.315 0.129 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,271,525
Number of Sequences: 60738
Number of extensions: 819977
Number of successful extensions: 2758
Number of sequences better than 1.0e-05: 18
Number of HSP's better than 0.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2746
Number of HSP's gapped (non-prelim): 18
length of query: 391
length of database: 30,389,216
effective HSP length: 108
effective length of query: 283
effective length of database: 23,829,512
effective search space: 6743751896
effective search space used: 6743751896
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)