ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI4535 check: MH R KOG0302 General function prediction only Ribosome Assembly protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI4535 1577197 1578765 523
(523 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YMR131c [R] KOG0302 Ribosome Assembly protein 736 0.0
SPBC1711.07 [R] KOG0302 Ribosome Assembly protein 349 7e-96
At2g19540 [R] KOG0302 Ribosome Assembly protein 267 3e-71
7302218 [R] KOG0302 Ribosome Assembly protein 253 5e-67
Hs13899346 [R] KOG0302 Ribosome Assembly protein 244 2e-64
CE27292 [R] KOG0302 Ribosome Assembly protein 239 7e-63
At5g58230 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 118 2e-26
7299974 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NU... 114 4e-25
Hs5032027 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 112 1e-24
CE16234 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NU... 108 2e-23
Hs4506439 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 106 1e-22
At2g16780 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 106 1e-22
At4g35050 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 102 1e-21
CE11860 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NU... 97 6e-20
ECU07g0750 [B] KOG0264 Nucleosome remodeling factor subunit CAF1... 87 6e-17
SPCC1672.10 [B] KOG0264 Nucleosome remodeling factor subunit CAF... 86 1e-16
Hs22048320 [B] KOG0264 Nucleosome remodeling factor subunit CAF1... 86 1e-16
SPAC29A4.18 [B] KOG0264 Nucleosome remodeling factor subunit CAF... 76 1e-13
At2g19520 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 75 2e-13
YBR195c [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NU... 72 2e-12
At4g29730 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 72 3e-12
YDR128w [S] KOG0309 Conserved WD40 repeat-containing protein 69 2e-11
SPBC8D2.20c [U] KOG0307 Vesicle coat complex COPII subunit SEC31 67 5e-11
Hs17463450 [B] KOG0264 Nucleosome remodeling factor subunit CAF1... 67 7e-11
7295052 [U] KOG0277 Peroxisomal targeting signal type 2 receptor 65 2e-10
CE24997 [S] KOG0290 Conserved WD40 repeat-containing protein AN11 62 2e-09
YEL056w [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NU... 61 4e-09
YDL195w [U] KOG0307 Vesicle coat complex COPII subunit SEC31 61 4e-09
At3g63460 [U] KOG0307 Vesicle coat complex COPII subunit SEC31 61 5e-09
At1g29260 [U] KOG0277 Peroxisomal targeting signal type 2 receptor 60 8e-09
At5g24520 [S] KOG0290 Conserved WD40 repeat-containing protein AN11 60 1e-08
At1g20540 [S] KOG1007 WD repeat protein TSSC1 WD repeat superfamily 59 2e-08
Hs4505731 [U] KOG0277 Peroxisomal targeting signal type 2 receptor 58 3e-08
7297816 [S] KOG0309 Conserved WD40 repeat-containing protein 58 4e-08
SPAC12G12.14c [A] KOG0284 Polyadenylation factor I complex subun... 55 2e-07
Hs5032159 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 55 2e-07
Hs20551282 [B] KOG0264 Nucleosome remodeling factor subunit CAF1... 55 3e-07
ECU08g1110 [T] KOG0279 G protein beta subunit-like protein 55 3e-07
7301821 [S] KOG0269 WD40 repeat-containing protein 55 3e-07
7295646 [S] KOG0290 Conserved WD40 repeat-containing protein AN11 55 3e-07
At1g12910 [S] KOG0290 Conserved WD40 repeat-containing protein AN11 55 3e-07
Hs19923529 [A] KOG0284 Polyadenylation factor I complex subunit ... 54 6e-07
Hs18087841 [R] KOG1188 WD40 repeat protein 54 6e-07
At5g23430 [D] KOG0267 Microtubule severing protein katanin p80 s... 54 6e-07
Hs18599374 [Z] KOG0313 Microtubule binding protein YTM1 (contain... 54 7e-07
Hs13631383 [B] KOG0264 Nucleosome remodeling factor subunit CAF1... 54 7e-07
At3g26640 [S] KOG0290 Conserved WD40 repeat-containing protein AN11 54 7e-07
At1g76260 [S] KOG1007 WD repeat protein TSSC1 WD repeat superfamily 54 7e-07
Hs19913371 [B] KOG0273 Beta-transducin family (WD-40 repeat) pro... 53 1e-06
Hs16445424 [Z] KOG0313 Microtubule binding protein YTM1 (contain... 53 1e-06
At2g41500 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4... 53 1e-06
Hs5031729 [S] KOG0290 Conserved WD40 repeat-containing protein AN11 52 2e-06
Hs15150805 [B] KOG0273 Beta-transducin family (WD-40 repeat) pro... 52 2e-06
At1g11160 [D] KOG0267 Microtubule severing protein katanin p80 s... 52 2e-06
At1g80710 [S] KOG4328 WD40 protein 52 2e-06
At1g61210 [D] KOG0267 Microtubule severing protein katanin p80 s... 52 2e-06
YDR142c [U] KOG0277 Peroxisomal targeting signal type 2 receptor 52 3e-06
7296209 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 51 4e-06
YDR030c [R] KOG4155 FOG: WD40 repeat 51 5e-06
CE18578 [A] KOG0265 U5 snRNP-specific protein-like factor and re... 51 5e-06
Hs4757988 [R] KOG0645 WD40 repeat protein 50 8e-06
ECU05g1010 [R] KOG0302 Ribosome Assembly protein 50 8e-06
CE23620 [R] KOG0266 WD40 repeat-containing protein 50 8e-06
CE09086 [R] KOG0266 WD40 repeat-containing protein 50 8e-06
At2g47990 [S] KOG0310 Conserved WD40 repeat-containing protein 50 8e-06
>YMR131c [R] KOG0302 Ribosome Assembly protein
Length = 511
Score = 736 bits (1900), Expect = 0.0
Identities = 366/524 (69%), Positives = 418/524 (78%), Gaps = 14/524 (2%)
Query: 1 MSKRTASDEGLENVDDRIVHSKTEAGEVPSANAVNANEQDVEMGEFEDPYXXXXXXXXXX 60
MSKR+ + DR+V +KTE+ VP+ A + EQD + E+
Sbjct: 1 MSKRSIE---VNEEQDRVVSAKTESHSVPAIPA--SEEQDAPKNDLEEQLSDEFDSDGEI 55
Query: 61 XXXXXXXXXXXXXXXXXXXXXFLEKKQQQAQELVEKDQN-AEQEQSEQLWLPHLSKPLGP 119
L KKQ++A+ LV+KDQ+ +E+ ++L+LPH+S+PLGP
Sbjct: 56 IEIDGDDEINDEDD--------LRKKQEEAETLVQKDQSEGNKEKIQELYLPHMSRPLGP 107
Query: 120 DEVLEADPTVYEMLHTVNVPWPCMTLDVIPDTLGSGRRNYPQSLLMATATQASKKNQNEL 179
DEVLEADPTVYEMLH VN+PWPC+TLDVIPDTLGS RRNYPQS+L+ TATQ+S+K +NEL
Sbjct: 108 DEVLEADPTVYEMLHNVNMPWPCLTLDVIPDTLGSERRNYPQSILLTTATQSSRKKENEL 167
Query: 180 MVLKMSQLAKTLVKXXXXXXXXXXXXXXXXXPVIENENISLKDTTNRLKVSPFANAAQEV 239
MVL +S LAKTL+K PVIENENI L+DTTNRLKVSPFA + QEV
Sbjct: 168 MVLALSNLAKTLLKDDNEGEDDEEDDEDDVDPVIENENIPLRDTTNRLKVSPFAISNQEV 227
Query: 240 LCSTMSENGEVYIFDLASQVKAFETPGYQIPKQAKRPIHTVRNHGSVEGYANDWSPIIKT 299
L +TMSENG+VYI++LA Q KAF TPGYQIPK AKRPIHTV+NHG+VEGY DWSP+IKT
Sbjct: 228 LTATMSENGDVYIYNLAPQSKAFSTPGYQIPKSAKRPIHTVKNHGNVEGYGLDWSPLIKT 287
Query: 300 GAMLSGDCSGQVFLTQRHTSKWITDKQAFTVANNKSIEDLQWSRTESTVFASCGIDGYIR 359
GA+LSGDCSGQ++ TQRHTS+W+TDKQ FTV+NNKSIED+QWSRTESTVFA+ G DGYIR
Sbjct: 288 GALLSGDCSGQIYFTQRHTSRWVTDKQPFTVSNNKSIEDIQWSRTESTVFATAGCDGYIR 347
Query: 360 IWDTRSKKHKPAISVKASNTDVNVISWSEKIGYLLASGDDDGTWGVWDLRQFTPQNASTA 419
IWDTRSKKHKPAISVKASNTDVNVISWS+KIGYLLASGDD+GTWGVWDLRQFTP NA
Sbjct: 348 IWDTRSKKHKPAISVKASNTDVNVISWSDKIGYLLASGDDNGTWGVWDLRQFTPSNADAV 407
Query: 420 SPVAQYQFHKGAITSISFNPLDESIIAVASEDNTVTLWDLSVEADDEEIKQQAAETKELQ 479
PVAQY FHKGAITSI+FNPLDESI+AV SEDNTVTLWDLSVEADDEEIKQQAAETKELQ
Sbjct: 408 QPVAQYDFHKGAITSIAFNPLDESIVAVGSEDNTVTLWDLSVEADDEEIKQQAAETKELQ 467
Query: 480 QIPPQLLFVHWQKEVKDVKWHKQIPGCLVSTGTDGLNVWKTISV 523
+IPPQLLFVHWQKEVKDVKWHKQIPGCLVSTGTDGLNVWKTISV
Sbjct: 468 EIPPQLLFVHWQKEVKDVKWHKQIPGCLVSTGTDGLNVWKTISV 511
>SPBC1711.07 [R] KOG0302 Ribosome Assembly protein
Length = 480
Score = 349 bits (895), Expect = 7e-96
Identities = 190/497 (38%), Positives = 293/497 (58%), Gaps = 38/497 (7%)
Query: 29 PSANAVNANEQDVEMGEFEDPYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLEKKQQ 88
P A+ D EMGEFED Y ++E +
Sbjct: 18 PGQRGTVADNVDTEMGEFEDAYEDEIESEEE----------------------YIEADGE 55
Query: 89 QAQELVEKDQNAEQEQSEQLWLPHLSKPLGPDEVLEADPTVYEMLHTVNVPWPCMTLDVI 148
+ + E++QN + + S+ WLP + DE L ADP+VYEMLH + V WP ++ D++
Sbjct: 56 KDNGMDEEEQN-DAQPSKIPWLP--GGKINADEKLVADPSVYEMLHNIQVKWPFLSFDIL 112
Query: 149 PDTLGSGRRNYPQSLLMATATQASKKNQNELMVLKMSQLAKTLVKXXXXXXXXXXXXXXX 208
D+LG RR +P + + +QA N NEL V+K+SQL KT
Sbjct: 113 QDSLGEERRAWPHQMYLVGGSQALDSNDNELTVMKLSQLYKT---QHDENDDASDNSDVE 169
Query: 209 XXPVIENENISLKDTTNRLKVSPF-ANAAQEVLCSTMSENGEVYIFDLASQVKAFETPGY 267
P++E+++IS K NR++ + AN+++E L ++ E G+V+I+D+A +++ ++PG
Sbjct: 170 EDPILEHKSISTKGACNRVRSARRPANSSKESLLASFHETGKVHIWDIAPHLRSLDSPGV 229
Query: 268 QIPKQAKRPIHTVRNHGSVEGYANDWSPIIKTGAMLSGDCSGQVFLTQRHTSKWITDKQA 327
+ ++ P++TV H EGYA DWSP ++LSGD + ++FLT+ W TD
Sbjct: 230 MVSRKENSPLYTVNRH-KTEGYALDWSPF--EYSLLSGDNANEIFLTKYSNGGWQTDSSP 286
Query: 328 FTVANNKSIEDLQWSRTESTVFASCGIDGYIRIWDTRSKKHKPAISVKA-SNTDVNVISW 386
F +++ ++EDLQWS +E VF+SC DG RIWD R+K+ A++V A DVNV+SW
Sbjct: 287 F-LSHTAAVEDLQWSPSEKNVFSSCSCDGTFRIWDVRNKQKTSALTVNAHPGVDVNVLSW 345
Query: 387 SEKIGYLLASGDDDGTWGVWDLRQFTPQNASTASPVAQYQFHKGAITSISFNPLDESIIA 446
+ ++ LLA+G D+G W VWDLR ++S A+PVA +++H+ I SI ++P ++S+I
Sbjct: 346 NTRVPNLLATGADNGVWSVWDLRSL-KSSSSVATPVASFKWHRAPIYSIEWHPNEDSVIG 404
Query: 447 VASEDNTVTLWDLSVEADDEEIKQQAAETKELQQIPPQLLFVHW-QKEVKDVKWHKQIPG 505
V DN ++LWDLSVE D+EE +AAE LQ +PPQL+F+H Q+E+K++ WH+QIPG
Sbjct: 405 VVGADNQISLWDLSVELDEEEQDSRAAE--GLQDVPPQLMFIHMGQQEIKEMHWHRQIPG 462
Query: 506 CLVSTGTDGLNVWKTIS 522
+VST G+NV+KTI+
Sbjct: 463 TIVSTAMTGINVFKTIT 479
>At2g19540 [R] KOG0302 Ribosome Assembly protein
Length = 469
Score = 267 bits (683), Expect = 3e-71
Identities = 164/452 (36%), Positives = 236/452 (51%), Gaps = 45/452 (9%)
Query: 98 QNAEQEQSE------QLWLPHLSKPLGPDEVLEADPTVYEMLHTVNVPWPCMTLDVIPDT 151
+ AE SE ++W P + L E L+ DP+ Y LH +V WPC++ D++ D
Sbjct: 15 KKAEASSSEIPSIPTRVWQPGVDT-LEDGEELQCDPSAYNSLHGFHVGWPCLSFDILGDK 73
Query: 152 LGSGRRNYPQSLLMATATQASKKNQNELMVLKMSQLA--------KTLVKXXX------- 196
LG R +P +L M TQA K N + + K++ ++ KT
Sbjct: 74 LGLNRTEFPHTLYMVAGTQAEKAAHNSIGLFKITNVSGKRRDVVPKTFGNGEDEDEDDED 133
Query: 197 -XXXXXXXXXXXXXXPVIENENISLKDTTNRLKVSPFANAAQEVLCSTMSENGEVYIFDL 255
P I+ ++ NR++ P +C + +++G V ++D+
Sbjct: 134 DSDSDDDDGDEASKTPNIQVRRVAHHGCVNRIRAMP----QNSHICVSWADSGHVQVWDM 189
Query: 256 ASQVKAF---ETPGYQ--IPKQAKRPIHTVRNHGSVEGYANDWSPIIKTGAMLSGDCSGQ 310
+S + A ET G P + P+ H EGYA DWSP G +LSGDC
Sbjct: 190 SSHLNALAESETEGKDGTSPVLNQAPLVNFSGHKD-EGYAIDWSPAT-AGRLLSGDCKSM 247
Query: 311 VFLTQRHTSKWITDKQAFTVANNKSIEDLQWSRTESTVFASCGIDGYIRIWDTRSKKHKP 370
+ L + + W D F + S+EDLQWS E VFASC +DG + +WD R K P
Sbjct: 248 IHLWEPASGSWAVDPIPFA-GHTASVEDLQWSPAEENVFASCSVDGSVAVWDIRLGK-SP 305
Query: 371 AISVKASNTDVNVISWSEKIGYLLASGDDDGTWGVWDLRQFTPQNASTASPVAQYQFHKG 430
A+S KA N DVNVISW+ +LASG DDGT+ + DLR +A VA +++HK
Sbjct: 306 ALSFKAHNADVNVISWNRLASCMLASGSDDGTFSIRDLRLIKGGDAV----VAHFEYHKH 361
Query: 431 AITSISFNPLDESIIAVASEDNTVTLWDLSVEADDEEIKQQAAETKEL----QQIPPQLL 486
ITSI ++ + S +AV S DN +T+WDLS+E D+EE + A+TKEL Q +PPQLL
Sbjct: 362 PITSIEWSAHEASTLAVTSGDNQLTIWDLSLEKDEEEEAEFNAQTKELVNTPQDLPPQLL 421
Query: 487 FVH-WQKEVKDVKWHKQIPGCLVSTGTDGLNV 517
FVH QK++K++ WH QIPG ++ST DG N+
Sbjct: 422 FVHQGQKDLKELHWHNQIPGMIISTAGDGFNI 453
>7302218 [R] KOG0302 Ribosome Assembly protein
Length = 422
Score = 253 bits (646), Expect = 5e-67
Identities = 151/418 (36%), Positives = 228/418 (54%), Gaps = 28/418 (6%)
Query: 120 DEVLEADPTVYEMLHTVNVPWPCMTLDVIPDTLGSGRRNYPQSLLMATATQASKKNQNEL 179
DE L D + Y MLH + PC++ DVIPD LGSGR+++P + + TQAS+ + N L
Sbjct: 19 DEELVCDESAYVMLHQASTGAPCLSFDVIPDELGSGRQSFPMTAYIVAGTQASRAHVNNL 78
Query: 180 MVLKMSQLAKTLV------KXXXXXXXXXXXXXXXXXPVIENENISLKDTTNRLKVSPFA 233
+V+KMS L KT + P + + + NR++
Sbjct: 79 IVMKMSNLHKTQDNDGDEDEELEDDQDDVTDREELKKPQMTCALVKHQGCVNRVRARRLG 138
Query: 234 NAAQEVLCSTMSENGEVYIFDLASQVKAFETPGYQIPKQAK----RPIHTVRNHGSVEGY 289
N+ V ++ SE G V I+DL ++A E Q+ KQ + RP+ T H EG+
Sbjct: 139 NS---VYAASWSELGRVNIWDLTQPLQAVENA--QLAKQYEQSEARPVFTFGGHQQ-EGF 192
Query: 290 ANDWSPIIKTGAMLSGDCSGQVFL-TQRHTSKWITDKQAFTVANNKSIEDLQWSRTESTV 348
A DWSP G + +GDC + + T W D++ +++S+EDLQWS E +V
Sbjct: 193 AIDWSPSAD-GVLATGDCRRDIHVWTPVEDGTWKVDQRPLA-GHSQSVEDLQWSPNERSV 250
Query: 349 FASCGIDGYIRIWDTRSKKHKPAISV--KASNTDVNVISWSEKIGYLLASGDDDGTWGVW 406
ASC +D IRIWD R+ K + A +DVNVISW+ ++ ASG DDG +W
Sbjct: 251 LASCSVDKTIRIWDCRASPQKACMLTCEDAHQSDVNVISWNRNEPFI-ASGGDDGYLHIW 309
Query: 407 DLRQFTPQNASTASPVAQYQFHKGAITSISFNPLDESIIAVASEDNTVTLWDLSVEADDE 466
DLRQF + P+A ++ H IT++ ++P + +++A +D+ + LWDL+VE D +
Sbjct: 310 DLRQF-----QSKKPIATFKHHTDHITTVEWSPAEATVLASGGDDDQIALWDLAVEKDID 364
Query: 467 EIKQQAAETKELQQIPPQLLFVH-WQKEVKDVKWHKQIPGCLVSTGTDGLNVWKTISV 523
+ A L ++PPQLLF+H QKE+K++ WH Q+PG L+ST G N+++TISV
Sbjct: 365 QAVDPAQNEDVLNKLPPQLLFIHQGQKEIKELHWHPQLPGVLLSTAHSGFNIFRTISV 422
>Hs13899346 [R] KOG0302 Ribosome Assembly protein
Length = 446
Score = 244 bits (624), Expect = 2e-64
Identities = 158/438 (36%), Positives = 224/438 (51%), Gaps = 27/438 (6%)
Query: 99 NAEQEQSEQLWLPHLSKPLGPDEVLEADPTVYEMLHTVNVPWPCMTLDVIPDTLGSGRRN 158
+ E Q++LP PL E L D Y + H PC++ D++ D LG R
Sbjct: 23 DTSSEGPAQVYLPGRGPPLREGEELVMDEEAYVLYHRAQTGAPCLSFDIVRDHLGDNRTE 82
Query: 159 YPQSLLMATATQASKKNQNELMVLKMSQLAKTLVK----XXXXXXXXXXXXXXXXXPVIE 214
P +L + TQA N LM+L+M L T P +E
Sbjct: 83 LPLTLYLCAGTQAESAQSNRLMMLRMHNLHGTKPPPSEGSDEEEEEEDEEDEEERKPQLE 142
Query: 215 NENISLKDTTNRLKVSPFANAAQEVLCSTMSENGEVYIFDLASQVKAFETP----GYQIP 270
+ NR++VS +E + SE G+V +F L ++ E P +
Sbjct: 143 LAMVPHYGGINRVRVSWL---GEEPVAGVWSEKGQVEVFALRRLLQVVEEPQALAAFLRD 199
Query: 271 KQAK-RPIHTVRNHGSVEGYANDWSPIIKTGAMLSGDCSGQVFL-TQRHTSKWITDKQAF 328
+QA+ +PI + H EG+A DWSP + TG +L+GDC + L T W D++ F
Sbjct: 200 EQAQMKPIFSFAGHMG-EGFALDWSPRV-TGRLLTGDCQKNIHLWTPTDGGSWHVDQRPF 257
Query: 329 TVANNKSIEDLQWSRTESTVFASCGIDGYIRIWDTRSKKHKPAI--SVKASNTDVNVISW 386
V + +S+EDLQWS TE+TVFASC D IRIWD R+ K + + A + DVNVISW
Sbjct: 258 -VGHTRSVEDLQWSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVISW 316
Query: 387 SEKIGYLLASGDDDGTWGVWDLRQFTPQNASTASPVAQYQFHKGAITSISFNPLDESIIA 446
S + +LL SG DDG +WDLRQF + SPVA ++ H +TS+ ++P D + A
Sbjct: 317 SRREPFLL-SGGDDGALKIWDLRQF-----KSGSPVATFKQHVAPVTSVEWHPQDSGVFA 370
Query: 447 VASEDNTVTLWDLSVEADDEEIKQQAAETKELQQIPPQLLFVH-WQKEVKDVKWHKQIPG 505
+ D+ +T WDL+VE D E +A L +P QLLFVH + E+K++ WH Q PG
Sbjct: 371 ASGADHQITQWDLAVERDPEAGDVEA--DPGLADLPQQLLFVHQGETELKELHWHPQCPG 428
Query: 506 CLVSTGTDGLNVWKTISV 523
LVST G +++TISV
Sbjct: 429 LLVSTALSGFTIFRTISV 446
>CE27292 [R] KOG0302 Ribosome Assembly protein
Length = 453
Score = 239 bits (610), Expect = 7e-63
Identities = 140/458 (30%), Positives = 231/458 (49%), Gaps = 39/458 (8%)
Query: 83 LEKKQQQAQELVEKDQNAEQEQSEQLWLPHLSKPLGPDEVLEADPTVYEMLHTVNVPWPC 142
+++ +++ E ++D+ + Q Q ++P LS+PL E L+ DP+ Y++ H+ N WPC
Sbjct: 18 IDESEEEVDETDDEDEEVPENQ-RQAYIPGLSRPLKKGEELDFDPSAYKLFHSFNSDWPC 76
Query: 143 MTLDVIPDTLGSGRRNYPQSLLMATATQASKKNQNELMVLKMSQLAKTLVKXXXXXXXXX 202
++ DV+ D LG R +P + + TQA K NE++V+ + L +
Sbjct: 77 LSFDVVKDGLGENRTQFPAECYIVSGTQADKPRDNEIIVMGLKNLTTMRKEKENKGDDSD 136
Query: 203 XXXXXXXXPVIENE----------NISLKDTTNRLKVSPFANAAQEVLCSTMSENGEVYI 252
E E +I NR++ ++ +C+ S+ G V +
Sbjct: 137 TSEDESEDEDAEEEKKREPKMHAVSIPHYGGINRIRSDRLGDST---VCACWSDQGRVQV 193
Query: 253 FDLASQVKAFETPGYQIPKQAK---RPIHTVRNHGSVEGYANDWSPIIKTGAMLSGDCSG 309
+++ + + + + RP+ T G EGY WS + KTG + +GD
Sbjct: 194 WNITDALNYTHGMSGESKTEVQKIDRPLFTNNGSGK-EGYGLAWSSL-KTGDLATGDIIK 251
Query: 310 QVFLTQ-RHTSKWITDKQAFTVANNKSIEDLQWSRTESTVFASCGIDGYIRIWDTRSKKH 368
+++L Q + +W T + KS+EDL WS TE+ + ASC DG I++WDTRS
Sbjct: 252 KIYLWQMKEGGQWAVGANPLT-GHKKSVEDLAWSPTETGLLASCSADGSIKLWDTRSAPK 310
Query: 369 KPAISV--KASNTDVNVISWSEKIGYLLASGDDDGTWGVWDLRQFTPQNASTASPVAQYQ 426
+ KA +DVNVISW+ L+ SG DDG +W L+ PVA ++
Sbjct: 311 DACVCTVQKAHESDVNVISWNRHEN-LIVSGGDDGELKIWSLK-----TIQFGQPVALFK 364
Query: 427 FHKGAITSISFNPLDESIIAVASEDNTVTLWDLSVEADDEEIKQQAAETKELQQIPPQLL 486
+H ITS+ ++P + + + ED+ T+WD++ EAD + ++ +PPQL+
Sbjct: 365 YHNSPITSVDWHPHETTTFMASGEDDQTTIWDIATEADGQ---------TNIEGVPPQLM 415
Query: 487 FVHW-QKEVKDVKWHKQIPGCLVSTGTDGLNVWKTISV 523
FVH Q EVK+V WH+QIPG ++T DG NV+KTI++
Sbjct: 416 FVHMGQNEVKEVHWHQQIPGLAINTSIDGFNVFKTINI 453
>At5g58230 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 424
Score = 118 bits (295), Expect = 2e-26
Identities = 108/407 (26%), Positives = 181/407 (43%), Gaps = 46/407 (11%)
Query: 127 PTVYEMLHTVNVPWPCMTLDVIPDTLGSGRRNYP-QSLLMATATQASKKNQNELMVLKMS 185
P +Y+++ T + WP +T++ +PD ++Y Q +++ T T S+ N ++L
Sbjct: 29 PFLYDLVITHALEWPSLTVEWLPDREEPSGKDYSVQKMILGTHTSESEPNY---LMLAQV 85
Query: 186 QL----AKTLVKXXXXXXXXXXXXXXXXXPVIENENISLKDTTNRLKVSPFANAAQEVLC 241
QL ++ + V + I+ NR + P +
Sbjct: 86 QLPLDDTESEARQYDDDRSEFGGFGCATGKVQIIQQINHDGEVNRARYMP----QNPFII 141
Query: 242 STMSENGEVYIFDLASQVKAFETPGYQIPKQAKRPIHTVRNHGSVEGYANDWSPIIKTGA 301
+T + N EVY+FD + G A P +R H S EGY WS K G
Sbjct: 142 ATKTVNAEVYVFDYSKHPSKPPLDG------ACNPDLKLRGHSS-EGYGLSWSKF-KQGH 193
Query: 302 MLSGDCSGQVFL-----TQRHTSKWITDKQAFTVANNKSIEDLQWSRTESTVFASCGIDG 356
+LSG Q+ L T ++ S D Q A+ +ED+ W +F S G D
Sbjct: 194 LLSGSDDAQICLWDINATPKNKS---LDAQQIFKAHEGVVEDVAWHLRHEYLFGSVGDDQ 250
Query: 357 YIRIWDTRS-KKHKPAISVKASNTDVNVISWSEKIGYLLASGDDDGTWGVWDLRQFTPQN 415
Y+ IWD RS KP SV A + +VN ++++ +++A+G D T ++DLR+
Sbjct: 251 YLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKL---- 306
Query: 416 ASTASPVAQYQFHKGAITSISFNPLDESIIAVASEDNTVTLWDLSVEADDEEIKQQAAET 475
STA + + HK + + +NP +E+I+A + +WDLS D+E+ + A +
Sbjct: 307 -STA--LHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS-RIDEEQTVEDAEDG 362
Query: 476 KELQQIPPQLLFVH--WQKEVKDVKWHKQIPGCLVSTGTDG-LNVWK 519
PP+LLF+H ++ D W+ + S D L +W+
Sbjct: 363 ------PPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQ 403
>7299974 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 430
Score = 114 bits (285), Expect = 4e-25
Identities = 100/406 (24%), Positives = 175/406 (42%), Gaps = 44/406 (10%)
Query: 127 PTVYEMLHTVNVPWPCMTLDVIPDTLGSGRRNYP-QSLLMATATQASKKNQNELMVLKMS 185
P +Y+++ T + WP +T +PD ++Y L++ T T QN L++ +
Sbjct: 33 PFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTS---DEQNHLLIASV- 88
Query: 186 QLAKTLVKXXXXXXXXXXXXXXXXXPVIENENISLK----DTTNRLKVSPFANAAQEVLC 241
QL + V I +K NR + P NA +
Sbjct: 89 QLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHEGEVNRARYMP-QNAC---VI 144
Query: 242 STMSENGEVYIFDLASQVKAFETPGYQIPKQAKRPIHTVRNHGSVEGYANDWSPIIKTGA 301
+T + + +V +FD P P +P +R H EGY W+P +
Sbjct: 145 ATKTPSSDVLVFDYTKH------PSKPEPSGECQPDLRLRGHQK-EGYGLSWNPNLNGYL 197
Query: 302 MLSGD----CSGQVFLTQRHTSKWITDKQAFTVANNKSIEDLQWSRTESTVFASCGIDGY 357
+ + D C + T + + I K FT + +ED+ W ++F S D
Sbjct: 198 LSASDDHTICLWDINATPKE-HRVIDAKNIFT-GHTAVVEDVAWHLLHESLFGSVADDQK 255
Query: 358 IRIWDTRSKK-HKPAISVKASNTDVNVISWSEKIGYLLASGDDDGTWGVWDLRQFTPQNA 416
+ IWDTR+ KP+ +V A +VN +S++ ++LA+G D T +WDLR +
Sbjct: 256 LMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLH 315
Query: 417 STASPVAQYQFHKGAITSISFNPLDESIIAVASEDNTVTLWDLSVEADDEEIKQQAAETK 476
S ++ HK I + ++P +E+I+A + D + +WDLS +++ T+
Sbjct: 316 S-------FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQ-------STE 361
Query: 477 ELQQIPPQLLFVH--WQKEVKDVKWHKQIPGCLVSTGTDG-LNVWK 519
+ + PP+LLF+H ++ D W+ P + S D + VW+
Sbjct: 362 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQ 407
>Hs5032027 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 425
Score = 112 bits (281), Expect = 1e-24
Identities = 95/406 (23%), Positives = 168/406 (40%), Gaps = 44/406 (10%)
Query: 127 PTVYEMLHTVNVPWPCMTLDVIPD-TLGSGRRNYPQSLLMATATQASKKNQNELMVLKMS 185
P +Y+++ T + WP +T +PD T G+ L++ T T QN L++ +
Sbjct: 29 PFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTS---DEQNHLVIASV- 84
Query: 186 QLAKTLVKXXXXXXXXXXXXXXXXXPVIENENISLK----DTTNRLKVSPFANAAQEVLC 241
QL + V I +K NR + P +
Sbjct: 85 QLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMP----QNPCII 140
Query: 242 STMSENGEVYIFDLASQVKAFETPGYQIPKQAKRPIHTVRNHGSVEGYANDWSPIIKTGA 301
+T + + +V +FD P P P +R H EGY W+P +
Sbjct: 141 ATKTPSSDVLVFDYTKH------PSKPDPSGECNPDLRLRGHQK-EGYGLSWNPNLSGHL 193
Query: 302 MLSGD----CSGQVFLTQRHTSKWITDKQAFTVANNKSIEDLQWSRTESTVFASCGIDGY 357
+ + D C + + + D + + +ED+ W ++F S D
Sbjct: 194 LSASDDHTICLWDISAVPKEGK--VVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQK 251
Query: 358 IRIWDTRSKK-HKPAISVKASNTDVNVISWSEKIGYLLASGDDDGTWGVWDLRQFTPQNA 416
+ IWDTRS KP+ SV A +VN +S++ ++LA+G D T +WDLR +
Sbjct: 252 LMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-- 309
Query: 417 STASPVAQYQFHKGAITSISFNPLDESIIAVASEDNTVTLWDLSVEADDEEIKQQAAETK 476
+ ++ HK I + ++P +E+I+A + D + +WDLS +++ +
Sbjct: 310 -----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQ-------SPE 357
Query: 477 ELQQIPPQLLFVH--WQKEVKDVKWHKQIPGCLVSTGTDG-LNVWK 519
+ + PP+LLF+H ++ D W+ P + S D + VW+
Sbjct: 358 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
>CE16234 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 417
Score = 108 bits (270), Expect = 2e-23
Identities = 97/405 (23%), Positives = 175/405 (42%), Gaps = 47/405 (11%)
Query: 127 PTVYEMLHTVNVPWPCMTLDVIPDTLGSGRRNYPQSLLMATATQASKKNQNELMVLKM-- 184
P +Y+++ T + WP +++ +PD + L++ T T QN L++ K+
Sbjct: 26 PFLYDLVMTHALEWPSLSVQWLPDVAKDNSDHTIHRLILGTHTS---DEQNHLLISKICM 82
Query: 185 -SQLAKTLVKXXXXXXXXXXXXXXXXXPVIENENISLKDTTNRLKVSPFANAAQEVLCST 243
+ A+ V + I+ + NR + P + + +T
Sbjct: 83 PTDDAQFDASRYDTERSEYGGFGAVNGKVEPDIRINHEGEVNRARYMP----QKSNIIAT 138
Query: 244 MSENGEVYIFDLASQVKAFETPGYQIPKQAK-RPIHTVRNHGSVEGYANDWSPIIKTGAM 302
S + +VYIFD +P+ P+ ++ H + EGY W+P K G +
Sbjct: 139 KSPHADVYIFDYLKHSA--------VPRDNTFNPLIRLKGH-TKEGYGLSWNPN-KEGLI 188
Query: 303 LSGD-----CSGQVFLTQRHTSKWITDKQAFTVANNKSIEDLQWSRTESTVFASCGIDGY 357
LS C + Q + + K F + +ED+ W VF S G D
Sbjct: 189 LSASDDQTVCHWDINANQNVAGE-LQAKDVFK-GHESVVEDVAWHVLHDGVFGSVGDDKK 246
Query: 358 IRIWDTRSKKHKPAISVKASNTDVNVISWSEKIGYLLASGDDDGTWGVWDLRQFTPQNAS 417
+ IWD R+ P + A + +VN ++++ ++LA+G D T +WDLR +
Sbjct: 247 LLIWDVRTS--TPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMK--- 301
Query: 418 TASPVAQYQFHKGAITSISFNPLDESIIAVASEDNTVTLWDLSVEADDEEIKQQAAETKE 477
+ ++ H+ I + ++P +E+I+A + D + +WDLS +D Q+AE +
Sbjct: 302 ----LHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGED-----QSAE--D 350
Query: 478 LQQIPPQLLFVH--WQKEVKDVKWHKQIPGCLVSTGTDG-LNVWK 519
+ PP+LLF+H ++ D W+ P + S D L VW+
Sbjct: 351 AEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQ 395
>Hs4506439 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 425
Score = 106 bits (264), Expect = 1e-22
Identities = 96/404 (23%), Positives = 174/404 (42%), Gaps = 40/404 (9%)
Query: 127 PTVYEMLHTVNVPWPCMTLDVIPDTLGSGRRNYPQS-LLMATATQASKKNQNELMVLKM- 184
P +Y+++ T + WP +T+ +P+ ++Y L++ T T QN L+V ++
Sbjct: 28 PFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTS---DEQNHLVVARVH 84
Query: 185 --SQLAKTLVKXXXXXXXXXXXXXXXXXPVIENENISLKDTTNRLKVSPFANAAQEVLCS 242
+ A+ + I+ + NR + P + +
Sbjct: 85 IPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMP----QNPHIIA 140
Query: 243 TMSENGEVYIFDLASQVKAFETPGYQIPKQAKRPIHTVRNHGSVEGYANDWSPIIKTGAM 302
T + + +V +FD P P P +R H EGY W+ + +G +
Sbjct: 141 TKTPSSDVLVFDYTKH------PAKPDPSGECNPDLRLRGHQK-EGYGLSWNSNL-SGHL 192
Query: 303 LSGDCSGQVFLTQRHTSKW---ITDKQAFTVANNKSIEDLQWSRTESTVFASCGIDGYIR 359
LS V L + I D +A ++ +ED+ W ++F S D +
Sbjct: 193 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 252
Query: 360 IWDTRSK-KHKPAISVKASNTDVNVISWSEKIGYLLASGDDDGTWGVWDLRQFTPQNAST 418
IWDTRS KP+ V A +VN +S++ ++LA+G D T +WDLR +
Sbjct: 253 IWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK---- 308
Query: 419 ASPVAQYQFHKGAITSISFNPLDESIIAVASEDNTVTLWDLSVEADDEEIKQQAAETKEL 478
+ ++ HK I + ++P +E+I+A + D + +WDLS + +Q+AE +
Sbjct: 309 ---LHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGE-----EQSAE--DA 358
Query: 479 QQIPPQLLFVH--WQKEVKDVKWHKQIPGCLVSTGTDG-LNVWK 519
+ PP+LLF+H ++ D W+ P + S D + +W+
Sbjct: 359 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 402
>At2g16780 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 415
Score = 106 bits (264), Expect = 1e-22
Identities = 100/403 (24%), Positives = 171/403 (41%), Gaps = 46/403 (11%)
Query: 127 PTVYEMLHTVNVPWPCMTLDVIPDTLGSGRRNY---PQSLLMATATQASKKNQNELMVLK 183
P +Y++L + + WP +T+ +P T + L++ T T S Q+ LMV
Sbjct: 26 PFLYDLLISHPLEWPSLTVHWVPSTPNPYVADSYFGVHKLILGTHTSGSA--QDFLMV-- 81
Query: 184 MSQLAKTLVKXXXXXXXXXXXXXXXXXPVIE-NENISLKDTTNRLKVSPFANAAQEVLCS 242
A + P +E + I + NR + P + L
Sbjct: 82 ----ADVVTPTPNAEPGIGGANQDPFIPKVEIRQRIRVDGEVNRARCMP----QKPTLVG 133
Query: 243 TMSENGEVYIFDLASQVKAFETPGYQIPKQAKRPIHTVRNHGSVEGYANDWSPIIKTGAM 302
+ EV++FD A +T P + H EGY WSP K G +
Sbjct: 134 AKTSGCEVFLFDYAKHAAKSQTSECD-------PDLRLVGHDK-EGYGLSWSPF-KEGYL 184
Query: 303 LSGDCSGQVFLTQRHTSKWITDKQAFTV--ANNKSIEDLQWSRTESTVFASCGIDGYIRI 360
LSG ++ L + A V + +I D+ W +F S G DG + I
Sbjct: 185 LSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGSAGEDGRLVI 244
Query: 361 WDTRSKKHKPAISVKASNTDVNVISWSEKIGYLLASGDDDGTWGVWDLRQFTPQNASTAS 420
WDTR+ + + VK +VN +S++ ++LA+ D T ++DLR+ +
Sbjct: 245 WDTRTNQMQH--QVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLN-------A 295
Query: 421 PVAQYQFHKGAITSISFNPLDESIIAVASEDNTVTLWDLSVEADDE-EIKQQAAETKELQ 479
P+ H+G + + ++P E+++A + ED + +WDL+ +++ EI+ A +
Sbjct: 296 PLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDG---- 351
Query: 480 QIPPQLLFVH--WQKEVKDVKWHKQIPGCLVSTGTD-GLNVWK 519
PP+LLF H + ++ D W+K P + S D L VW+
Sbjct: 352 --PPELLFSHGGHKAKISDFAWNKNEPWVIASVAEDNSLQVWQ 392
>At4g35050 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 424
Score = 102 bits (254), Expect = 1e-21
Identities = 99/403 (24%), Positives = 171/403 (41%), Gaps = 46/403 (11%)
Query: 127 PTVYEMLHTVNVPWPCMTLDVIPDT-LGSGRRNYPQSLLMATATQASKKNQNELMVLKMS 185
P +Y+++ + + WP +TL +P T + + Y + T S Q+ LMV
Sbjct: 27 PFLYDLMISHPLEWPSLTLHWVPSTPIPYSKDPYFAVHKLILGTHTSGGAQDFLMV---- 82
Query: 186 QLAKTLVKXXXXXXXXXXXXXXXXXPVIE-NENISLKDTTNRLKVSPFANAAQEVLCSTM 244
A ++ P +E + I + NR + P + L
Sbjct: 83 --ADVVIPTPDAEPGLGGRDQEPIVPKVEIKQKIRVDGEVNRARCMP----QKPTLVGAK 136
Query: 245 SENGEVYIFDLASQVKAFETPGYQIPKQAKRPIHTVRNHGSVEGYANDWSPIIKTGAMLS 304
+ EV++FD A +T P + H EGY WS K G +LS
Sbjct: 137 TSGSEVFLFDYARLSGKPQTSECD-------PDLRLMGHEQ-EGYGLAWSSF-KEGYLLS 187
Query: 305 GDCSGQVFLTQRHTSKWITDKQAFTV----ANNKSIEDLQWSRTESTVFASCGIDGYIRI 360
G ++ L S TDK + + IED+ W +F S G D + I
Sbjct: 188 GSQDQRICLWD--VSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQLVI 245
Query: 361 WDTRSKKHKPAISVKASNTDVNVISWSEKIGYLLASGDDDGTWGVWDLRQFTPQNASTAS 420
WD R+ + + VK ++N +S++ ++LA+ D T ++DLR+ T +
Sbjct: 246 WDLRTNQMQH--QVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLT-------A 296
Query: 421 PVAQYQFHKGAITSISFNPLDESIIAVASEDNTVTLWDLSVEADDE-EIKQQAAETKELQ 479
P+ H+G + + ++P E+++A + ED + +WD++ D++ EI+ A +
Sbjct: 297 PLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDG---- 352
Query: 480 QIPPQLLFVH--WQKEVKDVKWHKQIPGCLVSTGTD-GLNVWK 519
PP+LLF H + ++ D W+K P + S D L VW+
Sbjct: 353 --PPELLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQ 393
>CE11860 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 412
Score = 97.1 bits (240), Expect = 6e-20
Identities = 92/405 (22%), Positives = 168/405 (40%), Gaps = 42/405 (10%)
Query: 127 PTVYEMLHTVNVPWPCMTLDVIPDTLGSGRRNYPQSL-LMATATQASKKNQNELMVLKMS 185
P +Y+ + T V WP +++ +PD + N S+ M T QN LM+ K +
Sbjct: 22 PYLYDTVVTKEVEWPSLSVQWMPDVTKT--ENSDSSMHRMIHGTHTCGGVQNHLMISKFT 79
Query: 186 QLAKTL----VKXXXXXXXXXXXXXXXXXPVIENENISLKDTTNRLKVSPFANAAQEVLC 241
T K I+ +R + P +
Sbjct: 80 ITTDTPEFDDAKWDSEREEFGGYGEGSAAKWDTEIKINHPGEVHRARYMPH----NPFII 135
Query: 242 STMSENGEVYIFDLASQVKAFETPGYQIPKQAK-RPIHTVRNHGSVEGYANDWSPIIKTG 300
++ + +VYIFD PK K RP ++ H EGY WS + G
Sbjct: 136 ASRGPSDDVYIFDYTKHPSE--------PKDTKFRPQLRLKGHEG-EGYGMSWSNT-REG 185
Query: 301 AMLSGDCSGQVFLTQRHTSKWITDK---QAFTVANNKSIEDLQWSRTESTVFASCGIDGY 357
+L+ G + + ++ I+ + Q+ ++ + ED+ + + VF S G D
Sbjct: 186 HLLTAGDDGMICHWDINANQTISGQIVPQSKFKGHSSNAEDVSFHALHNFVFGSVGDDRK 245
Query: 358 IRIWDTRSKKHKPAISVKASNTDVNVISWSEKIGYLLASGDDDGTWGVWDLRQFTPQNAS 417
+ +WD R K P ++ +VN I+++ Y+LA+G D T +WD+R +
Sbjct: 246 LNLWDLRQSK--PQLTAVGHTAEVNCITFNPFSEYILATGSVDKTVALWDMRNMRKK--- 300
Query: 418 TASPVAQYQFHKGAITSISFNPLDESIIAVASEDNTVTLWDLSVEADDEEIKQQAAETKE 477
+ + H I +SF+P E+++A + D+ V +WD+S D ++++
Sbjct: 301 ----MYTLKHHNDEIFQVSFSPHYETVLASSGSDDRVIVWDISKIQDPSSSSAASSDS-- 354
Query: 478 LQQIPPQLLFVH--WQKEVKDVKWHKQIPGCLVSTGT-DGLNVWK 519
+PP+++F+H +V D W+ P + S+ + L VW+
Sbjct: 355 ---VPPEVIFIHAGHTGKVADFSWNPNRPWTICSSDEFNALQVWE 396
>ECU07g0750 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 384
Score = 87.0 bits (214), Expect = 6e-17
Identities = 90/399 (22%), Positives = 170/399 (42%), Gaps = 48/399 (12%)
Query: 127 PTVYEMLHTVNVPWPCMTLDVIPDTL---GSGRRNYPQSLLMATATQASKKNQNELMVLK 183
P +Y+++ + + WP +++ PD +GR Q LL++T T S++ +
Sbjct: 23 PYLYDLMFSHTLEWPSLSVQWFPDVRRDEEAGRTT--QRLLLSTHTSGSEE--------E 72
Query: 184 MSQLAKTLVKXXXXXXXXXXXXXXXXXPVIENENISLKDTTNRLKVSPFANAAQEVLCST 243
+AK +I + IS+ D NR++ +P +A VL +
Sbjct: 73 YILIAKVEFPDEFDESLNEEVGGDMRLKII--QRISIMDEANRVRYNP---SACNVL-AV 126
Query: 244 MSENGEVYIFDLASQVKAFETPGYQIPKQAKRPIHTVRNHGSVEGYANDWSPIIKTGAML 303
S+ +++++D + + P RP +R H S G+ W+ + G +
Sbjct: 127 RSDLPDIHVYDYTKHLSHEKIP---------RPDMVLRGH-SAGGFGLSWNH-LNPGELA 175
Query: 304 SGDCSGQVFLTQRHTSKWITDKQAFTVANNKSIEDLQWSRTESTVFASCGIDGYIRIWDT 363
G+V + + ++ D +S + + +S G G + +WDT
Sbjct: 176 GCGEGGEVCVFDVSQESSSISPTVVLRRHETAVNDCAFSFFDKKLLSSAGDGGMVVLWDT 235
Query: 364 RSKKHKPAISVKASNTDVNVISWSEKIGYLLASGDDDGTWGVWDLRQFTPQNASTASPVA 423
RS+ AI +A +D+ + +S G ++A+ DG+ VWD R S + P+
Sbjct: 236 RSEDCIHAIE-EAHTSDILSVRFSPLDGNVIATSSCDGSVKVWDRR-------SLSQPLH 287
Query: 424 QYQFHKGAITSISFNPLDESIIAVASEDNTVTLWDLSVEADDEEIKQQAAETKELQQIPP 483
H + S+ ++P ++ ++A S D V +WDL +A E ++ AE PP
Sbjct: 288 ILLGHSKDVVSVEWSPHNDKVLASGSTDRRVIVWDLG-QAGAEVPEEYKAEG------PP 340
Query: 484 QLLFVH--WQKEVKDVKWHKQIPGCLVSTGTDG-LNVWK 519
++ F+H V D+ W+ P + S D L +W+
Sbjct: 341 EMKFLHGGHTSTVCDISWNPAEPFEIASVSEDNILQIWQ 379
>SPCC1672.10 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 430
Score = 86.3 bits (212), Expect = 1e-16
Identities = 88/378 (23%), Positives = 156/378 (40%), Gaps = 52/378 (13%)
Query: 127 PTVYEMLHTVNVPWPCMTLDVIPDTLGSGRRNYP-QSLLMATATQASKKNQNELMVLKMS 185
P +Y+++ T + WP +T+ +PD +Y Q L++ T T + +N ++ +++
Sbjct: 38 PFLYDLVITHALEWPSLTIQWLPDKKTIPGTDYSIQRLILGTHTSGNDQNYLQIASVQLP 97
Query: 186 QLAKTLVKXXXXXXXXXXXXXXXXXPVIENENISLKDTTNRLKVSPFANAAQEVLCSTMS 245
+ + + ++ I NR + P + + +TM
Sbjct: 98 NFDEDTTEFTPSTIRRAQATGSYTIEI--SQKIPHDGDVNRARYMP----QKPEIIATMG 151
Query: 246 ENGEVYIFDLASQVKAFETPGYQIPKQAKRPIHTVRNHGSVEGYANDWSPIIKTGAMLSG 305
E G YIFD T G +P QA HT EG+ W+P + G + +G
Sbjct: 152 EGGNAYIFDTTCHDAL--TTGEALP-QAVLKGHTA------EGFGLCWNPNLP-GNLATG 201
Query: 306 DCSGQVFLTQRHTSKWITDKQAFTVANNKSIE-------------DLQWSRTESTVFASC 352
+ L W Q+FT + K I D+Q+ + AS
Sbjct: 202 AEDQVICL-------WDVQTQSFTSSETKVISPIAKYHRHTDIVNDVQFHPQHEALLASV 254
Query: 353 GIDGYIRIWDTRSKKHKPAISV-KASNTDVNVISWSEKIGYLLASGDDDGTWGVWDLRQF 411
D ++I DTR + A V +A + +N ++ + YLLA+ D T +WDLR
Sbjct: 255 SDDCTLQIHDTRLNPEEEAPKVIQAHSKAINAVAINPFNDYLLATASADKTVALWDLR-- 312
Query: 412 TPQNASTASPVAQYQFHKGAITSISFNPLDESIIAVASEDNTVTLWDLSVEADDEEIKQQ 471
+ + + H+ + + ++P DE I+A +S D V +WDL + +E+ +
Sbjct: 313 -----NPYQRLHTLEGHEDEVYGLEWSPHDEPILASSSTDRRVCIWDLE-KIGEEQTPED 366
Query: 472 AAETKELQQIPPQLLFVH 489
A + P+LLF+H
Sbjct: 367 AEDGS------PELLFMH 378
>Hs22048320 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 345
Score = 85.9 bits (211), Expect = 1e-16
Identities = 75/308 (24%), Positives = 134/308 (43%), Gaps = 33/308 (10%)
Query: 218 ISLKDTTNRLKVSPFANAAQEVLCSTMSENGEVYIFDLASQVKAFETPGYQIPKQAKRPI 277
I+ + NR + P + T + + +V +FD P P P
Sbjct: 36 INHEGEVNRARYMP----QNSCIIKTKTPSSDVLVFDYTKY------PSKPDPSGECNPD 85
Query: 278 HTVRNHGSVEGYANDWSPIIKTGAMLSGDCSGQVFLTQRHT--SKWITDKQAFTVANNKS 335
+ H EGY W+P + +G +LS V L + D + +
Sbjct: 86 LRLCGHQK-EGYGLSWNPNL-SGHLLSASDDHTVCLWDISAIPKEGKVDARTIFTGHTAV 143
Query: 336 IEDLQWSRTESTVFASCGIDGYIRIWDTRSKK-HKPAISVKASNTDVNVISWSEKIGYLL 394
+ED+ W+ ++F D + IWDTRSK KP+ SV A +VN +S++ ++L
Sbjct: 144 VEDVFWNLLHESLFRLVADDQKLMIWDTRSKNTSKPSHSVDAYTAEVNCLSFNPYGEFIL 203
Query: 395 ASGDDDGTWGVWDLRQFTPQNASTASPVAQYQFHKGAITSISFNPLDESIIAVASEDNTV 454
A+G D T +WDLR + V ++ HK I + ++P +E+I+A + D+ +
Sbjct: 204 ATGSADKTVALWDLRNLKLK-------VHSFESHKDEIFQVQWSPHNETILASSGTDHGL 256
Query: 455 TLWDLSVEADDEEIKQQAAETKELQQIPPQLLFVH--WQKEVKDVKWHKQIPGCLVSTGT 512
+WDLS +++ ++ + PP+ LF+H ++ D + P + S
Sbjct: 257 NVWDLSKITEEQ-------SPEDAEDRPPE-LFIHGGHTAKIPDFSLNPSEPWMICSVSE 308
Query: 513 DG-LNVWK 519
+ + VW+
Sbjct: 309 NNIMEVWQ 316
>SPAC29A4.18 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 431
Score = 76.3 bits (186), Expect = 1e-13
Identities = 76/376 (20%), Positives = 152/376 (40%), Gaps = 48/376 (12%)
Query: 127 PTVYEMLHTVNVPWPCMTLDVIPDTLGSGRRNYPQSLLMATATQASKKNQNELMVLKMSQ 186
P +Y+++ T + WPCM+L P+ Y + + K + +++
Sbjct: 38 PFLYDLIITRALEWPCMSLQWYPEQQIFAEHGYTEQKMFLGVRADVGKYLLAVASIQLPY 97
Query: 187 LAKTLVKXXXXXXXXXXXXXXXXXPVIENENISLKDTTN-RLKVSPFANAAQEVLCSTMS 245
L +T+ P E S D ++ R+ +S + + V + +
Sbjct: 98 LNQTV-------------------PPTTMEGASAGDESSLRVNISNLYSHPESVCSAKLM 138
Query: 246 ENGEVYIFDLAS---QVKAFETPGYQIPKQAK----RPIHTVRNHGSVEGYANDWSPIIK 298
+ + + + V F+ ++ A +P + + H + + +
Sbjct: 139 PQDDSCVATVGNYHNDVLVFDKESFESYSSASESPLKPKYRLTKH--TQPCTSVCWNFLS 196
Query: 299 TGAMLSGDCSGQVF---LTQRHTSKWITDKQAFTVANNKSIEDLQWSRTESTVFASCGID 355
G ++SG + L + S + + ++ K + D+++ + AS D
Sbjct: 197 KGTLVSGSQDATLSCWDLNAYNESDSASVLKVHISSHEKQVSDVRFHYKHQDLLASVSYD 256
Query: 356 GYIRIWDTR--SKKHKPAISVKASNTDVNVISWSEKIGYLLASGDDDGTWGVWDLRQFTP 413
Y+ + D R KPA SV A + ++ ++++ ++LA+ D T +WDLR
Sbjct: 257 QYLHVHDIRRPDASTKPARSVHAHSGPIHSVAFNPHNDFILATCSTDKTIALWDLRNLNQ 316
Query: 414 QNASTASPVAQYQFHKGAITSISFNPLDESIIAVASEDNTVTLWDLSVEADDEEIKQQAA 473
+ + + H+ +T ISF+P +E I+A S D +WDLS +D+
Sbjct: 317 R-------LHTLEGHEDIVTKISFSPHEEPILASTSADRRTLVWDLSRIGEDQ------- 362
Query: 474 ETKELQQIPPQLLFVH 489
+E Q PP+LLF+H
Sbjct: 363 PAEEAQDGPPELLFMH 378
>At2g19520 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 507
Score = 75.5 bits (184), Expect = 2e-13
Identities = 47/181 (25%), Positives = 84/181 (45%), Gaps = 13/181 (7%)
Query: 335 SIEDLQWSRTESTVFASCGIDGYIRIWDTRSKKHKPAISVKASNTDVNVISWSEKIGYLL 394
++ED+ +S T + F S G D + +WD R+ + KA + D++ + W+ L+
Sbjct: 294 TVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDWNPHDDNLI 353
Query: 395 ASGDDDGTWGVWDLRQFTPQNASTASPVAQYQFHKGAITSISFNPLDESIIAVASEDNTV 454
+G D T ++D R+ T SP+ +++ HK A+ + ++P S+ ++ED +
Sbjct: 354 LTGSADNTVRLFDRRKLTAN--GVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLL 411
Query: 455 TLWDLSVEADDEEIKQQAAETKELQQIPPQLLFVH--WQKEVKDVKWHKQIPGCLVSTGT 512
+WD D K+ K P L F H + +V D W+ P +VS
Sbjct: 412 NIWDY-----DRVSKKSDRAAKS----PAGLFFQHAGHRDKVVDFHWNASDPWTIVSVSD 462
Query: 513 D 513
D
Sbjct: 463 D 463
>YBR195c [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 422
Score = 72.0 bits (175), Expect = 2e-12
Identities = 87/420 (20%), Positives = 165/420 (38%), Gaps = 68/420 (16%)
Query: 129 VYEMLHTVNVPWPCMTLDVIPDTLGSGRRNYPQSLLMATATQASKKNQNELMVLKMSQLA 188
+Y+ L+T + WP +T PD + + +L+++ T + K + + K+S L
Sbjct: 33 LYDYLNTNSTKWPSLTCQFFPDLDTTSDEH---RILLSSFTSSQKPEDETIYISKISTLG 89
Query: 189 KTLVKXXXXXXXXXXXXXXXXXPVIENEN----ISLKDTTNRLKVSPFANAAQEVLCSTM 244
+++ IS+ + + +++
Sbjct: 90 HIKWSSLNNFDMDEMEFKPENSTRFPSKHLVNDISIFFPNGECNRARYLPQNPDIIAGAS 149
Query: 245 SENGEVYIFDLASQVKAFETPGYQIPKQAK--RPIHT--VRNHGSVEGY-ANDWSP---- 295
S+ G +YIFD G +Q+K P T +HG ++ A D S
Sbjct: 150 SD-GAIYIFDRTKH-------GSTRIRQSKISHPFETKLFGSHGVIQDVEAMDTSSADIN 201
Query: 296 --------IIKTGAMLSGDCSGQVF---LTQRHTSKWITDKQAFTV-ANNKSIEDLQWSR 343
+ + +LS +GQV + Q I D ++ ++ ++ D+ W
Sbjct: 202 EATSLAWNLQQEALLLSSHSNGQVQVWDIKQYSHENPIIDLPLVSINSDGTAVNDVTWMP 261
Query: 344 TESTVFASCGIDGYIRIWDTRSKKHKPAISVKASNTDVNVISWSEKIGYLLASGDDDGTW 403
T ++FA+C + + D R+KK K + + + VN ++ K +LAS D +G
Sbjct: 262 THDSLFAACTEGNAVSLLDLRTKKEKLQSNREKHDGGVNSCRFNYKNSLILASADSNGRL 321
Query: 404 GVWDLRQFTPQNASTASPVAQYQFHKGAITSISFNPLDESIIAVA-SEDNTVTLWDLSVE 462
+WD+R SP+A + H +++++ ++P ++++A A ED V LWD S E
Sbjct: 322 NLWDIRNM------NKSPIATME-HGTSVSTLEWSPNFDTVLATAGQEDGLVKLWDTSCE 374
Query: 463 ADDEEIKQQAAETKELQQIPPQLLFVH--WQKEVKDVKWHKQIPGCLVSTGTD-GLNVWK 519
+ +F H V D+ W P + S D +++WK
Sbjct: 375 ---------------------ETIFTHGGHMLGVNDISWDAHDPWLMCSVANDNSVHIWK 413
>At4g29730 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 496
Score = 71.6 bits (174), Expect = 3e-12
Identities = 52/196 (26%), Positives = 90/196 (45%), Gaps = 23/196 (11%)
Query: 335 SIEDLQWSRTESTVFASCGIDGYIRIWDTRSKKHKPAISV-KASNTDVNVISWSEKIGYL 393
++ED+ + + + F S G D + +WD R+ PA+ V KA + D++ + W+ L
Sbjct: 283 TVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGT-SPAMKVEKAHDADLHCVDWNPHDNNL 341
Query: 394 LASGDDDGTWGVWDLRQFTPQNASTASPVAQYQFHKGAITSISFNPLDESIIAVASEDNT 453
+ +G D T V+D R T + SPV +++ H+ A+ + ++P S+ ++ED
Sbjct: 342 ILTGSADNTVRVFDRRNLT--SNGVGSPVYKFEGHRAAVLCVQWSPDKSSVFGSSAEDGL 399
Query: 454 VTLWDLSVEADDEEIKQQAAETKELQQIPPQLLFVH--WQKEVKDVKWHKQIPGCLVST- 510
+ +WD D K+ TK P L F H + +V D W P +VS
Sbjct: 400 LNIWDC-----DRVGKKSERATK----TPDGLFFQHAGHRDKVVDFHWSLLNPWTIVSVS 450
Query: 511 -------GTDGLNVWK 519
G L +W+
Sbjct: 451 DNCESIGGGGTLQIWR 466
>YDR128w [S] KOG0309 Conserved WD40 repeat-containing protein
Length = 1148
Score = 68.9 bits (167), Expect = 2e-11
Identities = 39/129 (30%), Positives = 66/129 (50%), Gaps = 9/129 (6%)
Query: 332 NNKSIEDLQWSRTESTVFASCGIDGYIRIWDTRSKKHKPAISVKASNTDVNVISWSEKIG 391
++++I D+ ++ V A+C +D Y+ WD RS H+P S + + + + W+ K
Sbjct: 113 HSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSP-HRPFYSTSSWRSAASQVKWNYKDP 171
Query: 392 YLLASGDDDGTWGVWDLRQFTPQNASTASPVAQYQFHKGAITSISFNPLDESIIAVASED 451
+LAS + + VWDLR+ ++P+ + H ++ SI FN S I +S D
Sbjct: 172 NVLASSHGNDIF-VWDLRK-------GSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSND 223
Query: 452 NTVTLWDLS 460
TV WD S
Sbjct: 224 GTVKFWDYS 232
>SPBC8D2.20c [U] KOG0307 Vesicle coat complex COPII subunit SEC31
Length = 1224
Score = 67.4 bits (163), Expect = 5e-11
Identities = 49/200 (24%), Positives = 92/200 (45%), Gaps = 26/200 (13%)
Query: 323 TDKQAFTVANNKS-----IEDLQWSRTESTVFASCGIDGYIRIWDTRSKKHKPAISVKAS 377
+D+ + ++A KS + L ++R + + AS G + +WD + + A+ +
Sbjct: 102 SDEASASIATYKSENGSILGPLDFNRLQPNLLASGDNKGDVWVWDIKHPQQPFALPKQNR 161
Query: 378 NTDVNVISWSEKIGYLLASGDDDGTWGVWDLRQFTPQNASTASPVAQYQFHKGAITSISF 437
+++V+V+SW+ K+ ++LASG+ VWD++ + A GA+ SI++
Sbjct: 162 SSEVHVVSWNNKVSHILASGNATEYTTVWDVKLKRQVLNLSYLGAAGVSAATGAVNSIAW 221
Query: 438 NPLDESIIAVASEDN---TVTLWDLSVEADDEEIKQQAAETKELQQIPPQLLFVHWQKEV 494
+P + + +A A +DN + WDL Q PQ + QK
Sbjct: 222 HPNNATRLATAIDDNRNPIILTWDLR------------------QPTVPQNILTGHQKAA 263
Query: 495 KDVKWHKQIPGCLVSTGTDG 514
+ W + P L+S+G DG
Sbjct: 264 LSLSWCPEDPTFLLSSGKDG 283
>Hs17463450 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 396
Score = 67.0 bits (162), Expect = 7e-11
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 23/218 (10%)
Query: 309 GQVFLTQRHTSKWITDKQAFTVANNKSIEDLQWSRTESTVFASCGIDGYIRIWDTRSKK- 367
G L+QR + D + + +ED+ W ++F S D + IWDT S
Sbjct: 173 GTAVLSQRREK--VVDVKIIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTCSNSA 230
Query: 368 HKPAISVKASNTDVNVI---SWSEKIGYLLASGDDDGTWGVWDLRQFTPQNASTASPVAQ 424
KP+ SV A +V + + ++LA+G D T + DLR + +
Sbjct: 231 SKPSHSVDAHTAEVTLTLLPLFQSLYEFILATGSADKTVALRDLRNLKLK-------LHS 283
Query: 425 YQFHKGAITSISFNPLDESIIAVASEDNTVTLWDLSVEADDEEIKQQAAETKELQQIPPQ 484
++ K I + ++P +E+I+A + ++ + +WDLS + KQ + K+ PP+
Sbjct: 284 FELLKDKIFQVQWSPHNETILASSGTNHRLNVWDLSKIGE----KQSPEDKKDR---PPE 336
Query: 485 LLFVH--WQKEVKDVKWHKQIPGCLVSTGTDG-LNVWK 519
LLF+H ++ D + P + S D + VW+
Sbjct: 337 LLFIHGGHTAKIPDFSGNPNEPWVICSVPEDNIMQVWQ 374
>7295052 [U] KOG0277 Peroxisomal targeting signal type 2 receptor
Length = 339
Score = 65.5 bits (158), Expect = 2e-10
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 16/203 (7%)
Query: 274 KRPIHTVRNHGSVEGYANDWSPIIKTGAMLSG--DCSGQVFLTQRHTSKWITDKQAFTVA 331
K+P+ ++ H + E Y+ DW +LSG DC+ +++ R S IT V
Sbjct: 113 KQPLICLQEHKN-EVYSLDWGEKWNYHTLLSGSWDCTLKLWDCNRQNS--ITT----FVG 165
Query: 332 NNKSIEDLQWSRTESTVFASCGIDGYIRIWDTRSKKHKPAISVKASNTDVNVISWSEKIG 391
+N I ++S + +FAS DG++ +W++ KP +S++A ++ WS
Sbjct: 166 HNDLIYGAKFSPLIANLFASVSTDGHLNLWNSLDFAGKPLMSIEAHASEALCCDWSHFDR 225
Query: 392 YLLASGDDDGTWGVWDLRQFTPQNASTASPVAQYQFHKGAITSISFNPLDESIIAVASED 451
+L +G DG WDLR+ + V + + A+ ++ +P +++A A+ D
Sbjct: 226 NVLVTGGSDGLIRGWDLRKM-------RTHVFELYSGEFAVRRLACSPHSAAVLASANYD 278
Query: 452 NTVTLWDLSVEADDEEIKQQAAE 474
T +W+L +E+ + E
Sbjct: 279 FTTRIWNLERGESAQEVNARHTE 301
>CE24997 [S] KOG0290 Conserved WD40 repeat-containing protein AN11
Length = 478
Score = 62.4 bits (150), Expect = 2e-09
Identities = 47/198 (23%), Positives = 82/198 (40%), Gaps = 23/198 (11%)
Query: 308 SGQVFLTQRHTSKWITDKQAFTVANNKSIEDLQWSRTESTVFASCGIDGYIRIWDTRSKK 367
+GQ T R T+ + +A++K + D+ +SR + +FAS G DG +R++D R +
Sbjct: 287 TGQAIGTTRPTAAIDGTVRTQLIAHDKEVFDISFSRGSAQIFASVGADGSLRLFDLRRLE 346
Query: 368 HKPAISVKASNTDVNVISWSEK-IGYLLASGDDDGTWGVWDLRQFTPQNASTASPVAQYQ 426
H + + ++W+ Y+ G D + DLR +PVA+ +
Sbjct: 347 HSTIMYEDPQRQPLLRLAWNRNDHNYIATFGQDSKEVLILDLR-------LPCTPVARLR 399
Query: 427 FHKGAITSISFNPLDESIIAVASEDNTVTLWDLSVEADDEEIKQQAAETKELQQIPPQLL 486
H+ I +S+ P S I A +D +WD+ + + I +L
Sbjct: 400 NHEATINGLSWAPHSGSHICTAGDDYQALIWDVH---------------EMPKPINDPIL 444
Query: 487 FVHWQKEVKDVKWHKQIP 504
Q EV + W P
Sbjct: 445 AYRAQAEVNQIHWSSSFP 462
>YEL056w [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 401
Score = 61.2 bits (147), Expect = 4e-09
Identities = 85/420 (20%), Positives = 162/420 (38%), Gaps = 59/420 (14%)
Query: 115 KPLGPDEVLEA----DPTVYEMLHTVNVPWPCMTLDVIPDTLGSGRRNY-PQSLLMATAT 169
KPL DE + P +Y+ + + WP +T+ +P + + Q L++ T T
Sbjct: 6 KPLSVDEEYDLWKSNVPLMYDFVSETRLTWPSLTVQWLPTPVQELDGGFIKQELIIGTHT 65
Query: 170 QASKKNQNELMVLKMSQLAKTLVKXXXXXXXXXXXXXXXXXPVIENENISLK----DTTN 225
++N + + L K ++ N I+ K +
Sbjct: 66 SGEEENYLKFAEIN---LPKEILSNEDPQEEAGEEYQSSLPAPRSNIRITAKYEHEEEIT 122
Query: 226 RLKVSPFANAAQEVLCSTMSENGEVYIFDLASQVKAFETPGYQIPKQAKRPIHTVRNHGS 285
R + P + +T++ G V+++ + +++ T++ H
Sbjct: 123 RARYMP----QDPNIVATINGQGTVFLYSRSEGLQS-----------------TLKFHKD 161
Query: 286 VEGYANDWSPIIKTGAMLSGDCSGQVFLTQRHTSKWITDK-QAFTVANNKSIEDLQWSRT 344
GYA +S ++K G +LSG V L + + T + + ++ I D +W
Sbjct: 162 -NGYALSFSTLVK-GRLLSGSDDHTVALWEVGSGGDPTKPVRTWNDLHSDIINDNKWHNF 219
Query: 345 ESTVFASCGIDGYIRIWDTRSKKHKPAISVKASNTDVNVISWSEKIGYLLASGDDDGTWG 404
+F + D ++I D R+ + I N +++S LLA+ D
Sbjct: 220 NKDLFGTVSEDSLLKINDVRA--NNTTIDTVKCPQPFNTLAFSHHSSNLLAAAGMDSYVY 277
Query: 405 VWDLRQFTPQNASTASPVAQYQFHKGAITSISFNPLDESIIAVASEDNTVTLWDLSVEAD 464
++DLR P+ H+ A+ ++ F+ + ++ + DN + +WDL
Sbjct: 278 LYDLRNMK-------EPLHHMSGHEDAVNNLEFSTHVDGVVVSSGSDNRLMMWDL----- 325
Query: 465 DEEIKQQAAE--TKELQQIPPQLLFVH--WQKEVKDVKWHKQIPGCLVSTGTDG-LNVWK 519
KQ AE + + P+L+ VH + V D + QIP + S + L VWK
Sbjct: 326 ----KQIGAEQTPDDAEDGVPELIMVHAGHRSSVNDFDLNPQIPWLVASAEEENILQVWK 381
Score = 57.4 bits (137), Expect = 5e-08
Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 7/138 (5%)
Query: 329 TVANNKSIEDLQWSRTESTVFASCGIDGYIRIWDTRSKKHKPAISVKASNTDVNVISWSE 388
TV + L +S S + A+ G+D Y+ ++D R+ K +P + VN + +S
Sbjct: 247 TVKCPQPFNTLAFSHHSSNLLAAAGMDSYVYLYDLRNMK-EPLHHMSGHEDAVNNLEFST 305
Query: 389 KIGYLLASGDDDGTWGVWDLRQF----TPQNASTASP--VAQYQFHKGAITSISFNPLDE 442
+ ++ S D +WDL+Q TP +A P + + H+ ++ NP
Sbjct: 306 HVDGVVVSSGSDNRLMMWDLKQIGAEQTPDDAEDGVPELIMVHAGHRSSVNDFDLNPQIP 365
Query: 443 SIIAVASEDNTVTLWDLS 460
++A A E+N + +W S
Sbjct: 366 WLVASAEEENILQVWKCS 383
>YDL195w [U] KOG0307 Vesicle coat complex COPII subunit SEC31
Length = 1273
Score = 61.2 bits (147), Expect = 4e-09
Identities = 44/169 (26%), Positives = 82/169 (48%), Gaps = 18/169 (10%)
Query: 302 MLSGDCSGQVFLTQRHT-----SKWITDKQAFTVANNKSIEDLQWSRTESTVFASCGIDG 356
+ SG +G++F+ + S + ++++ + L W+++ + VFAS G
Sbjct: 124 LASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSN 183
Query: 357 YIRIWDTRSKKHKPAISVKASNTDV----NVISWSEKIGYLLAS---GDDDGTWGVWDLR 409
+ IWD ++KK +S + N+ + +V+ W K +A+ D+D + +WDLR
Sbjct: 184 FASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLR 243
Query: 410 QFTPQNASTASPVAQYQFHKGAITSISFNPLDESIIAVASEDNTVTLWD 458
NA+T Q H+ I S+ + DE ++ + DNTV LW+
Sbjct: 244 -----NANTPLQTLN-QGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWN 286
Score = 50.1 bits (118), Expect = 8e-06
Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 18/205 (8%)
Query: 298 KTGAMLSGDCSGQV---FLTQRHTSKWI-----TDKQAFTVANNKSIEDLQWSRTESTVF 349
K ++SG SG V F T W ++K ++ + DL WS +
Sbjct: 19 KIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNK-II 77
Query: 350 ASCGIDGYIRIWDTRSKKHKPAISVKASN--TDVNVISWSEKIGYLLASGDDDGTWGVWD 407
A +G + ++ T + + SN + V + ++ K +LASG ++G +WD
Sbjct: 78 AGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWD 137
Query: 408 LRQFT--PQNASTASPVAQYQFHKGAITSISFNPLDESIIAVASEDNTVTLWDLSVEADD 465
+ + T P N + +P Q + S+++N + A A N ++WDL +A
Sbjct: 138 MNKCTESPSNYTPLTP-GQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDL--KAKK 194
Query: 466 EEIKQQAAETKELQQIPPQLLFVHW 490
E I + T I QL V W
Sbjct: 195 EVI--HLSYTSPNSGIKQQLSVVEW 217
>At3g63460 [U] KOG0307 Vesicle coat complex COPII subunit SEC31
Length = 1097
Score = 60.8 bits (146), Expect = 5e-09
Identities = 47/188 (25%), Positives = 80/188 (42%), Gaps = 32/188 (17%)
Query: 331 ANNKSIEDLQWSRTESTVFASCGIDGYIRIWDTRSKKHKPAISVKAS-NTDVNVISWSEK 389
A I + W+R + AS +G IWD R K KP I+ S +V+ W+
Sbjct: 170 ATQGEISFISWNRKVQQILASTSYNGTTVIWDLR--KQKPIINFADSVRRRCSVLQWNPN 227
Query: 390 IG-YLLASGDDDG--TWGVWDLRQFTPQNASTASPVAQYQFHKGAITSISFNPLDESIIA 446
+ ++ + DDD T +WD+R SPV ++ H+ + ++ + P D S +
Sbjct: 228 VTTQIMVASDDDSSPTLKLWDMRNIM-------SPVREFTGHQRGVIAMEWCPSDSSYLL 280
Query: 447 VASEDNTVTLWDLSVEADDEEIKQQAAETKELQQIPPQLLFVHWQKEVKDVKWHKQIPGC 506
++DN WD + E + + A +W DV W+ +IPG
Sbjct: 281 TCAKDNRTICWDTNTA---EIVAELPAGN-------------NWN---FDVHWYPKIPGV 321
Query: 507 LVSTGTDG 514
+ ++ DG
Sbjct: 322 ISASSFDG 329
>At1g29260 [U] KOG0277 Peroxisomal targeting signal type 2 receptor
Length = 317
Score = 60.1 bits (144), Expect = 8e-09
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 9/122 (7%)
Query: 341 WSRTESTVFASCGIDGYIRIWDTRSKKHKPAISVKASNTDVNVISWSEKIGYLLASGDDD 400
W+ VFAS D +RIWD R + + A + ++ W++ +LA+ D
Sbjct: 157 WNPKHGDVFASASGDCTLRIWDVREPGS--TMIIPAHDFEILSCDWNKYDDCILATSSVD 214
Query: 401 GTWGVWDLRQFTPQNASTASPVAQYQFHKGAITSISFNPLDESIIAVASEDNTVTLWDLS 460
T VWD+R + P+A H A+ + F+P S+IA S D +V LWD
Sbjct: 215 KTVKVWDVRSYRV-------PLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWDYM 267
Query: 461 VE 462
VE
Sbjct: 268 VE 269
>At5g24520 [S] KOG0290 Conserved WD40 repeat-containing protein AN11
Length = 341
Score = 59.7 bits (143), Expect = 1e-08
Identities = 46/182 (25%), Positives = 82/182 (44%), Gaps = 18/182 (9%)
Query: 305 GDCSGQVFLTQRHTSKWITDKQAFTVANNKSIEDLQWSRTESTVFASCGIDGYIRIWDTR 364
G CS T K + + Q +A++K + D+ W E+ VFAS DG +RI+D R
Sbjct: 149 GTCSIDTTCTIWDIEKSVVETQL--IAHDKEVHDIAWG--EARVFASVSADGSVRIFDLR 204
Query: 365 SKKHKPAI-SVKASNTDVNVISWSEK-IGYLLASGDDDGTWGVWDLRQFTPQNASTASPV 422
K+H I +T + ++W+++ + Y+ D + D+R S PV
Sbjct: 205 DKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIR-------SPTMPV 257
Query: 423 AQYQFHKGAITSISFNPLDESIIAVASEDNTVTLWDLSVEA-----DDEEIKQQAAETKE 477
A+ + H+ ++ +I++ P I +D +W+L A D + +E +
Sbjct: 258 AELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGPNGIDPMSVYSAGSEINQ 317
Query: 478 LQ 479
LQ
Sbjct: 318 LQ 319
>At1g20540 [S] KOG1007 WD repeat protein TSSC1 WD repeat superfamily
Length = 379
Score = 58.5 bits (140), Expect = 2e-08
Identities = 66/321 (20%), Positives = 131/321 (40%), Gaps = 43/321 (13%)
Query: 218 ISLKDTTNRLKVSPFANAAQEVLCSTMSENGEVYIFDLAS-------------QVKAFET 264
+SLK+ N + + ++ E++C + + I+DLAS ++F
Sbjct: 64 LSLKEE-NEVHLLRLSSGGSELICEGLFSHPNE-IWDLASCPFDQRIFSTVFSTGESFGA 121
Query: 265 PGYQIPKQAKRPIHTVRNHGSVEGYANDWSPIIKTGAML---SGDCSGQVFLTQRHTSKW 321
+QIP+ ++ N +E A+ + + K +L SG C + + +++ W
Sbjct: 122 AIWQIPE-----LYGQLNSPQLERVASLDAHVGKINCVLWWPSGRCDKLISIDEQNIFLW 176
Query: 322 ITD---KQAFTVANNK-----SIEDLQWSRTESTVFASCGIDGYIRIWDTRSKKHKPAIS 373
D K A ++ + S+ W + A+ G + ++ WD R+ K +I
Sbjct: 177 SLDCSKKSAEVLSKDSAGMLHSLSGGAWDPHDVNAVAATG-ESSVQFWDLRTMKKVNSIE 235
Query: 374 VKASNTDVNVISWSEKIGYLLASGDDDGTWGVWDLRQFTPQNASTASPVAQYQFHKGAIT 433
+ V + ++ K ++L + +D+ VWDLR+ PV + H
Sbjct: 236 ----HAHVRGVDYNPKREHILVTAEDESGIHVWDLRK-------AKVPVQELPGHTHWTW 284
Query: 434 SISFNPLDESIIAVASEDNTVTLWDLSVEADDEEIKQQAAETKELQQIPPQLLFVHWQKE 493
++ NP + +I A D+ V LW S + D++ + E+ + P + ++
Sbjct: 285 AVRCNPEYDGLILSAGTDSVVNLWYASATSSDDKTSESPVESTRQRVNPLLNSYTDYEDS 344
Query: 494 VKDVKWHKQIPGCLVSTGTDG 514
V + W + P S DG
Sbjct: 345 VYGLAWSSREPWVFASLSYDG 365
>Hs4505731 [U] KOG0277 Peroxisomal targeting signal type 2 receptor
Length = 323
Score = 58.2 bits (139), Expect = 3e-08
Identities = 58/228 (25%), Positives = 91/228 (39%), Gaps = 18/228 (7%)
Query: 272 QAKRPIHTVRNHGSVEGYANDWSPIIKTGAMLSGDCSGQVFLTQRHTSKWITDKQAFTVA 331
+A P+ + H E Y+ DWS ++SG V L K + +
Sbjct: 99 KAAGPLQVYKEHAQ-EVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFRG---- 153
Query: 332 NNKSIEDLQWSRTESTVFASCGIDGYIRIWDTRSKKHKPAISVKASNTDVNVISWSEKIG 391
+ I WS FAS D +RIWD ++ + I + A ++ W +
Sbjct: 154 HESIIYSTIWSPHIPGCFASASGDQTLRIWDVKAAGVR--IVIPAHQAEILSCDWCKYNE 211
Query: 392 YLLASGDDDGTWGVWDLRQFTPQNASTASPVAQYQFHKGAITSISFNPLDESIIAVASED 451
LL +G D + WDLR + PV + H AI + F+P S++A S D
Sbjct: 212 NLLVTGAVDCSLRGWDLR-------NVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYD 264
Query: 452 NTVTLWDLS-VEADDEEIKQQAAETKELQ---QIPPQLLFVHWQKEVK 495
TV W+ S ++ E ++ T L Q P Q+ W + +K
Sbjct: 265 FTVRFWNFSKPDSLLETVEHHTEFTCGLDFSLQSPTQVADCSWDETIK 312
Score = 56.2 bits (134), Expect = 1e-07
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 10/128 (7%)
Query: 333 NKSIEDLQWSRTESTVFASCGIDGYIRIWDTRSKKHKPAISVKASNTDVNVISWSEKIG- 391
N + D+ WS V +C DG +++WDT +K P K +V + WS+ G
Sbjct: 67 NDGLFDVTWSENNEHVLITCSGDGSLQLWDT-AKAAGPLQVYKEHAQEVYSVDWSQTRGE 125
Query: 392 YLLASGDDDGTWGVWDLRQFTPQNASTASPVAQYQFHKGAITSISFNPLDESIIAVASED 451
L+ SG D T +WD + + ++ H+ I S ++P A AS D
Sbjct: 126 QLVVSGSWDQTVKLWD--------PTVGKSLCTFRGHESIIYSTIWSPHIPGCFASASGD 177
Query: 452 NTVTLWDL 459
T+ +WD+
Sbjct: 178 QTLRIWDV 185
>7297816 [S] KOG0309 Conserved WD40 repeat-containing protein
Length = 1004
Score = 57.8 bits (138), Expect = 4e-08
Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 10/129 (7%)
Query: 332 NNKSIEDLQWSRTESTVFASCGIDGYIRIWDTRSKKHKPAISVKA-SNTDVNVISWSEKI 390
+ +++ D+ W + + SC ID + IWD R + KPA+S+ A + + ++
Sbjct: 128 HTRTVTDIDWHGKDPNLLVSCSIDTFSHIWDLREPR-KPALSLNAVCMSGATQVGFNRVS 186
Query: 391 GYLLASGDDDGTWGVWDLRQFTPQNASTASPVAQYQFHKGAITSISFNPLDESIIAVASE 450
G LLA+ DG +WD+R+ + P H + I+++ E+ +A AS+
Sbjct: 187 GNLLAAA-HDGDLRIWDIRK-------GSCPTHYITAHLNRVHGINWSHKRETCLATASQ 238
Query: 451 DNTVTLWDL 459
D TV +D+
Sbjct: 239 DGTVKYFDV 247
>SPAC12G12.14c [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 509
Score = 55.5 bits (132), Expect = 2e-07
Identities = 50/214 (23%), Positives = 82/214 (37%), Gaps = 37/214 (17%)
Query: 302 MLSGDCSGQVFLTQRHTSKWITDKQAFTVANNKSIEDLQWSRTESTVFASCGIDGYIRIW 361
++SGD G V + + + A+ + D+ +S +S F + DG +++W
Sbjct: 138 LISGDGGGMVKYFEPNLNN-----VKIVQAHEMEVRDVAFSPNDSK-FVTASDDGSLKVW 191
Query: 362 DTRSKKHKPAISVKASNTDVNVISWSEKIGYLLASGDDDGTWGVWDLRQFTPQNASTASP 421
+ + + + DV + W G LLASG D WD R T +
Sbjct: 192 NFHMSTEE--LKLTGHGWDVKTVDWHPSKG-LLASGSKDNLVKFWDPR--------TGTC 240
Query: 422 VAQYQFHKGAITSISFNP-LDESIIAVASEDNTVTLWDLSVEADDEEIKQQAAETKELQQ 480
+A HK I SF + +A S D+T ++DL D ++
Sbjct: 241 IATLHGHKNTIMQASFQKNFGSNYLATVSRDSTCRVFDLRAMKDVRVLRGH--------- 291
Query: 481 IPPQLLFVHWQKEVKDVKWHKQIPGCLVSTGTDG 514
+K+V V WH P L + G+DG
Sbjct: 292 ----------EKDVNCVTWHPLYPNLLTTGGSDG 315
>Hs5032159 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 577
Score = 55.5 bits (132), Expect = 2e-07
Identities = 53/196 (27%), Positives = 78/196 (39%), Gaps = 29/196 (14%)
Query: 284 GSVEGYANDWS--------------PII------KTGAMLSGDCSGQVFLTQRHTSKWIT 323
GS +G+A W+ PI K +LS + HT +
Sbjct: 306 GSYDGFARIWTEDGNLASTLGQHKGPIFALKWNRKGNYILSAGVDKTTIIWDAHTGE--- 362
Query: 324 DKQAFTVANNKSIEDLQWSRTESTVFASCGIDGYIRIWDTRSKKHKPAISVKASNTDVNV 383
KQ F + ++ D+ W +T FASC D I + R +P + + +VN
Sbjct: 363 AKQQFPFHSAPAL-DVDWQN--NTTFASCSTDMCIHV--CRLGCDRPVKTFQGHTNEVNA 417
Query: 384 ISWSEKIGYLLASGDDDGTWGVWDLRQFTPQNASTASPVAQYQFHKGAITSISFNPLDES 443
I W G LLAS DD T +W ++Q + A Y + NP
Sbjct: 418 IKWDPS-GMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNI 476
Query: 444 IIAVASEDNTVTLWDL 459
++A AS D+TV LWD+
Sbjct: 477 MLASASFDSTVRLWDI 492
Score = 52.8 bits (125), Expect = 1e-06
Identities = 55/243 (22%), Positives = 102/243 (41%), Gaps = 51/243 (20%)
Query: 280 VRNHGSVEGYANDWSPIIKTGAMLSGDCSGQVFLTQRHTSKWITD--------KQAFTVA 331
+R H S E + W+P+ A SGD + +++ +++ T + V
Sbjct: 228 LRGHES-EVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 286
Query: 332 NNKSIEDLQWSRTESTVFASCGIDGYIRIWDTRSKKHKPAISVKASNTDVNVISWSEKIG 391
+NK + L W+ T T+ A+ DG+ RIW ++ A ++ + + W+ K
Sbjct: 287 SNKDVTSLDWN-TNGTLLATGSYDGFARIW---TEDGNLASTLGQHKGPIFALKWNRKGN 342
Query: 392 YLLASGDDDGTWGVWD-----LRQFTP-----------QNASTAS--------------- 420
Y+L++G D T +WD +Q P QN +T +
Sbjct: 343 YILSAGVDKTTI-IWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGC 401
Query: 421 --PVAQYQFHKGAITSISFNPLDESIIAVASEDNTVTLWDLSVEADDEEIKQQAAETKEL 478
PV +Q H + +I ++P ++A S+D T+ +W + E +++ A KE+
Sbjct: 402 DRPVKTFQGHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSMKQEVCIHDLQ---AHNKEI 457
Query: 479 QQI 481
I
Sbjct: 458 YTI 460
>Hs20551282 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 356
Score = 55.1 bits (131), Expect = 3e-07
Identities = 39/135 (28%), Positives = 67/135 (48%), Gaps = 17/135 (12%)
Query: 388 EKIGYLLASGDDDGTWGVWDLRQFTPQNASTASPVAQYQFHKGAITSISFNPLDESIIAV 447
EK ++LA+G D T + DLR + S ++ HK I ++P +E+I+A
Sbjct: 214 EKCEFILATGSADKTVALRDLRNLKLKLHS-------FELHKDKIFQFQWSPHNETILAS 266
Query: 448 ASEDNTVTLWDLSVEADDEEIKQQAAETKELQQIPPQLLFVH--WQKEVKDVKWHKQIPG 505
+ ++ + +WDLS + +Q+ E KE PP+LLF+H ++ D W+ P
Sbjct: 267 SGTNHRLNVWDLSKIGE-----KQSPEDKE--DGPPELLFIHGGHTAKIPDFSWNPNEPW 319
Query: 506 CLVSTGTDG-LNVWK 519
+ S D + VW+
Sbjct: 320 VICSVPEDNIMQVWQ 334
Score = 52.4 bits (124), Expect = 2e-06
Identities = 74/365 (20%), Positives = 131/365 (35%), Gaps = 60/365 (16%)
Query: 127 PTVYEMLHTVNVPWPCMTLDVIPDTLGSGRRNYP-QSLLMATATQASKKNQNELMVLKMS 185
P +Y+++ T V WP +T +PD + +++ L++ T T QN L++ +
Sbjct: 29 PFLYDLVLTHAVEWPSLTAQWLPDVIRPEGKDFSIHQLVLGTYTL---DEQNHLVITSV- 84
Query: 186 QLAKTLVKXXXXXXXXXXXXXXXXXPVIENENISLK----DTTNRLKVSPFANAAQEVLC 241
QL + V I +K N+++ P +
Sbjct: 85 QLPNDDTQFDASHYNTEKGEFGGFYSVRGKIEIEIKINHEGEVNKVRYMP----QNSCII 140
Query: 242 STMSENGEVYIFDLASQVKAFETPGYQIPKQAKRPIHTVRNHGSVEGYANDWSPIIKTGA 301
ST + + +V +FD P Q P P +R H EGY W+P + G
Sbjct: 141 STKTPSSDVLVFDYTKH------PSKQDPSGECDPDLCLRGHQK-EGYGLSWNPNL-CGH 192
Query: 302 MLSGD------CSGQVFLTQRHTSKWITDKQAFTVANNKSIEDLQWSRTESTVFASCGID 355
+LS C V +R ++I A+ D
Sbjct: 193 LLSAQMTTPAACGTSVLFQRREKCEFI--------------------------LATGSAD 226
Query: 356 GYIRIWDTRSKKHKPAISVKASNTDVNVISWSEKIGYLLASGDDDGTWGVWDLRQF---- 411
+ + D R+ K K S + + WS +LAS + VWDL +
Sbjct: 227 KTVALRDLRNLKLK-LHSFELHKDKIFQFQWSPHNETILASSGTNHRLNVWDLSKIGEKQ 285
Query: 412 TPQNASTASPVAQYQF--HKGAITSISFNPLDESIIAVASEDNTVTLWDLSVEADDEEIK 469
+P++ P + H I S+NP + +I EDN + +W ++ ++E
Sbjct: 286 SPEDKEDGPPELLFIHGGHTAKIPDFSWNPNEPWVICSVPEDNIMQVWQMAENIYNDEYP 345
Query: 470 QQAAE 474
+ + +
Sbjct: 346 EGSVD 350
>ECU08g1110 [T] KOG0279 G protein beta subunit-like protein
Length = 334
Score = 55.1 bits (131), Expect = 3e-07
Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 9/131 (6%)
Query: 332 NNKSIEDLQWSRTESTVFASCGIDGYIRIWDTRSKKHKPAISVKASNTDVNVISWSEKIG 391
++K I L S+ + + + G DG RIWDT SKK +I ++ DV +S +
Sbjct: 66 HSKRINGLDVSK-DGNMMVTVGSDGIGRIWDTESKK---SILLEGHGRDVLCVSINSN-D 120
Query: 392 YLLASGDDDGTWGVWDLRQFTPQNASTASPVAQYQFHKGAITSISFNPLDESIIAVASED 451
+ +G D T +++ T + H+G I ++F+P +ESI+A S D
Sbjct: 121 TKIVTGSVDRTMNLYN----TKGDLVLKMGRDMEMMHRGWINCVTFHPTEESILASGSAD 176
Query: 452 NTVTLWDLSVE 462
TV +WDL +
Sbjct: 177 GTVKIWDLDTQ 187
>7301821 [S] KOG0269 WD40 repeat-containing protein
Length = 776
Score = 55.1 bits (131), Expect = 3e-07
Identities = 30/126 (23%), Positives = 58/126 (45%), Gaps = 9/126 (7%)
Query: 335 SIEDLQWSRTESTVFASCGIDGYIRIWD-TRSKKHKPAISVKASNTDVNVISWSEKIGYL 393
S D+ WS +S + A+ +G + +WD ++ + K + + +++ +
Sbjct: 67 SANDVAWSTLDSNLLATAATNGVVSVWDLSKFGRQKQLLVYNEHERTAHTVTFHSSEPNI 126
Query: 394 LASGDDDGTWGVWDLRQFTPQNASTASPVAQYQFHKGAITSISFNPLDESIIAVASEDNT 453
L SG DGT +D+R N Y + ++ + F+P ++I + SE+ T
Sbjct: 127 LISGSQDGTIKCFDIRSDKSINT--------YFCNSESVRDVKFSPHTQNIFSAVSENGT 178
Query: 454 VTLWDL 459
V LWD+
Sbjct: 179 VQLWDM 184
>7295646 [S] KOG0290 Conserved WD40 repeat-containing protein AN11
Length = 321
Score = 55.1 bits (131), Expect = 3e-07
Identities = 40/157 (25%), Positives = 74/157 (46%), Gaps = 12/157 (7%)
Query: 330 VANNKSIEDLQWSRTES--TVFASCGIDGYIRIWDTRSKKHKPAISVKASNTDVNVISWS 387
+A++K + D+ +SR +FAS G DG +R++D R +H I ++T + ++W+
Sbjct: 149 IAHDKEVYDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPAHTALLRLAWN 208
Query: 388 EK-IGYLLASGDDDGTWGVWDLRQFTPQNASTASPVAQYQFHKGAITSISFNPLDESIIA 446
++ YL D + D+R +PVA+ H+ + I++ P I
Sbjct: 209 KQDPNYLATVAMDSCEVIILDVR-------VPCTPVARLSNHRACVNGIAWAPHSSCHIC 261
Query: 447 VASEDNTVTLWDLS--VEADDEEIKQQAAETKELQQI 481
A +D+ +WD+ A ++ I A E+ QI
Sbjct: 262 TAGDDHQALIWDIQQMPRAIEDPILAYTAAEGEVNQI 298
>At1g12910 [S] KOG0290 Conserved WD40 repeat-containing protein AN11
Length = 346
Score = 54.7 bits (130), Expect = 3e-07
Identities = 38/145 (26%), Positives = 70/145 (48%), Gaps = 14/145 (9%)
Query: 321 WITDKQAFT---VANNKSIEDLQWSRTESTVFASCGIDGYIRIWDTRSKKHKPAISVKAS 377
W +++A +A++K + D+ W VFAS DG +R++D R K+H I +
Sbjct: 163 WDIEREAVDTQLIAHDKEVFDIAWGGVG--VFASVSADGSVRVFDLRDKEHSTIIYESSE 220
Query: 378 -NTDVNVISWSEKIG-YLLASGDDDGTWGVWDLRQFTPQNASTASPVAQYQFHKGAITSI 435
+T + + W+++ Y+ D V D+R A PV + Q H+ ++ +I
Sbjct: 221 PDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIR-------FPALPVVELQRHQASVNAI 273
Query: 436 SFNPLDESIIAVASEDNTVTLWDLS 460
++ P I A +D+ +WD+S
Sbjct: 274 AWAPHSSCHICTAGDDSQALIWDIS 298
>Hs19923529 [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 1336
Score = 53.9 bits (128), Expect = 6e-07
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 33/186 (17%)
Query: 331 ANNKSIEDLQWSRTESTVFASCGIDGYIRIWDTRSKKHKPAISVKASNTDVNVISWSEKI 390
A+ ++I + +S T++ FA+C DG +RIWD + H+ I ++ DV + W
Sbjct: 200 AHKEAIREASFSPTDNK-FATCSDDGTVRIWDF-LRCHEERI-LRGHGADVKCVDWHPTK 256
Query: 391 GYLLASGDDDGTWGV--WDLRQFTPQNASTASPVAQYQFHKGAITSISFNPLDESIIAVA 448
G L+ SG D + WD T +A HK + + N L+ + + A
Sbjct: 257 G-LVVSGSKDSQQPIKFWD--------PKTGQSLATLHAHKNTVMEVKLN-LNGNWLLTA 306
Query: 449 SEDNTVTLWDLSVEADDEEIKQQAAETKELQQIPPQLLFVHWQKEVKDVKWHKQIPGCLV 508
S D+ L+D+ +K+ ELQ +F +KE V WH G
Sbjct: 307 SRDHLCKLFDI------RNLKE------ELQ------VFRGHKKEATAVAWHPVHEGLFA 348
Query: 509 STGTDG 514
S G+DG
Sbjct: 349 SGGSDG 354
>Hs18087841 [R] KOG1188 WD40 repeat protein
Length = 387
Score = 53.9 bits (128), Expect = 6e-07
Identities = 32/157 (20%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 322 ITDKQAFTVANNKS-----IEDLQWSRTESTVFASCGIDGYIRIWDTRSKKHKPAISVKA 376
I DK+ V S + ++++ + +V+++C DG ++ WD R + KP K
Sbjct: 54 IYDKERLNVLREFSGYPGLLNGVRFANSCDSVYSAC-TDGTVKCWDARVAREKPVQLFKG 112
Query: 377 SNTDVNVISWSEKIGYLLASG----DDDGTWGVWDLRQFTPQNASTASPVAQY-QFHKGA 431
+++ + +++ +G DDD WD R + ++T + Y + H
Sbjct: 113 YPSNIFISFDINCNDHIICAGTEKVDDDALLVFWDARMNSQNLSTTKDSLGAYSETHSDD 172
Query: 432 ITSISFNPLDESIIAVASEDNTVTLWDLSVEADDEEI 468
+T + F+P + +++ S D V ++D++++ +++ +
Sbjct: 173 VTQVRFHPSNPNMVVSGSSDGLVNVFDINIDNEEDAL 209
>At5g23430 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 922
Score = 53.9 bits (128), Expect = 6e-07
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 12/111 (10%)
Query: 349 FASCGIDGYIRIWDTRSKKHKPAISVKASNTDVNVISWSEKIGYLLASGDDDGTWGVWDL 408
FAS +D ++IWD R K + K VNV+ ++ G + SG +D VWDL
Sbjct: 116 FASGSLDTNLKIWDIRKKGC--IHTYKGHTRGVNVLRFTPD-GRWVVSGGEDNIVKVWDL 172
Query: 409 RQFTPQNASTASPVAQYQFHKGAITSISFNPLDESIIAVASEDNTVTLWDL 459
+ + +++ H+G I S+ F+P E ++A S D TV WDL
Sbjct: 173 --------TAGKLLTEFKSHEGQIQSLDFHP-HEFLLATGSADRTVKFWDL 214
>Hs18599374 [Z] KOG0313 Microtubule binding protein YTM1 (contains WD40
repeats)
Length = 423
Score = 53.5 bits (127), Expect = 7e-07
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 30/211 (14%)
Query: 267 YQIPKQAKRPIHTVRNH-GSVEGYAND----------WSPIIKTGAMLSGDCSGQVF-LT 314
+ + + + +H R H GSV+ A D W ++K + + D ++ T
Sbjct: 172 WNVERNKVKALHCCRGHAGSVDSIAVDGSGTKFCSGSWDKMLKIWSTVPTDEEDEMEEST 231
Query: 315 QRHTSKWITDKQAFT-------VANNKSIEDLQWSRTESTVFASCGIDGYIRIWDTRSKK 367
R K T++ T + +++ + WS E AS D IR+WD S
Sbjct: 232 NRPRKKQKTEQLGLTRTPIVTLSGHMEAVSSVLWSDAEEICSASW--DHTIRVWDVESGS 289
Query: 368 HKPAISVKASNTDVNVISWSEKIGYLLASGDDDGTWGVWDLRQFTPQNASTASPVAQYQF 427
K ++ N N IS+S + LASG D +WD P+ +
Sbjct: 290 LKSTLT---GNKVFNCISYSP-LCKRLASGSTDRHIRLWD-----PRTKDGSLVSLSLTS 340
Query: 428 HKGAITSISFNPLDESIIAVASEDNTVTLWD 458
H G +TS+ ++P E + S DN V LWD
Sbjct: 341 HTGWVTSVKWSPTHEQQLISGSLDNIVKLWD 371
>Hs13631383 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 262
Score = 53.5 bits (127), Expect = 7e-07
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 12/162 (7%)
Query: 240 LCSTMSENGEVYIFDLASQVKAFETPGYQIPKQAKRPIHTVRNHGSVEGYANDWSPIIKT 299
+ +T + + +V +FD P P P +R H EGY W+ + +
Sbjct: 104 IIATKTPSSDVLVFDYTKH------PAKPDPSGECNPDLRLRGHQK-EGYGLSWNSNL-S 155
Query: 300 GAMLSGDCSGQVFLTQRHTSKW---ITDKQAFTVANNKSIEDLQWSRTESTVFASCGIDG 356
G +LS V L + I D +A ++ +ED+ W ++F S D
Sbjct: 156 GHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQ 215
Query: 357 YIRIWDTRSK-KHKPAISVKASNTDVNVISWSEKIGYLLASG 397
+ IWDTRS KP+ V A +VN +S++ ++LA+G
Sbjct: 216 KLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 257
>At3g26640 [S] KOG0290 Conserved WD40 repeat-containing protein AN11
Length = 346
Score = 53.5 bits (127), Expect = 7e-07
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 11/133 (8%)
Query: 330 VANNKSIEDLQWSRTESTVFASCGIDGYIRIWDTRSKKHKPAISVKAS-NTDVNVISWSE 388
+A++K + D+ W VFAS DG +R++D R K+H I +T + +SW++
Sbjct: 175 IAHDKEVYDIAWGGVG--VFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNK 232
Query: 389 KIG-YLLASGDDDGTWGVWDLRQFTPQNASTASPVAQYQFHKGAITSISFNPLDESIIAV 447
+ Y+ V D+R A PV + Q H+ ++ +I++ P S I
Sbjct: 233 QDPRYMATVIMGSAKIVVLDIR-------FPALPVVELQRHQASVNAIAWAPHSSSHICS 285
Query: 448 ASEDNTVTLWDLS 460
A +D+ +WD+S
Sbjct: 286 AGDDSQALIWDIS 298
>At1g76260 [S] KOG1007 WD repeat protein TSSC1 WD repeat superfamily
Length = 350
Score = 53.5 bits (127), Expect = 7e-07
Identities = 51/230 (22%), Positives = 90/230 (38%), Gaps = 15/230 (6%)
Query: 293 WSPIIKTGAMLSGDCSGQVFLTQRHTSKWITDKQAFTVANNKSIEDLQWSRTESTVFASC 352
W P + ++S D VF + + K + S+ W+ + A+
Sbjct: 128 WCPSGNSDKLISMDEQNLVFWSLDSSKKSAEVLSKESAGMRHSLSGGAWNPHDVNSVAAT 187
Query: 353 GIDGYIRIWDTRSKKHKPAISVKASNTDVNVISWSEKIGYLLASGDDDGTWGVWDLRQFT 412
+ I+ WD R+ K +I V + ++ K ++L S DD+ +WDLR+
Sbjct: 188 S-ESSIQFWDLRTMKKNNSIE----RAHVRNVDYNLKREHILVSADDESGIHLWDLRK-- 240
Query: 413 PQNASTASPVAQYQFHKGAITSISFNPLDESIIAVASEDNTVTLWDLSVEADDEEIKQQA 472
T PV + H ++ NP E +I D+ V LW S A E ++
Sbjct: 241 -----TKFPVQELPGHTHWTWAVRCNPEYEELILSVGTDSAVNLWFAS--ASSEHKTSES 293
Query: 473 AETKELQQIPPQL-LFVHWQKEVKDVKWHKQIPGCLVSTGTDGLNVWKTI 521
Q++ P L + ++ V + W + P S DG V +++
Sbjct: 294 PVEASRQRVNPLLNSYTDYEDSVYGLAWSSREPWIFASLSYDGRVVIESV 343
>Hs19913371 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 514
Score = 53.1 bits (126), Expect = 1e-06
Identities = 52/243 (21%), Positives = 102/243 (41%), Gaps = 51/243 (20%)
Query: 280 VRNHGSVEGYANDWSPIIKTGAMLSGDCSGQVFLTQRHTSKWITD--------KQAFTVA 331
+R H S E + W+P+ A SGD + +++ +++ T + V
Sbjct: 165 LRGHES-EVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVP 223
Query: 332 NNKSIEDLQWSRTESTVFASCGIDGYIRIWDTRSKKHKPAISVKASNTDVNVISWSEKIG 391
+NK + L W+ +E T+ A+ DG+ RIW +K A ++ + + W++K
Sbjct: 224 SNKDVTSLDWN-SEGTLLATGSYDGFARIW---TKDGNLASTLGQHKGPIFALKWNKKGN 279
Query: 392 YLLASGDDDGTWGVWD-----LRQFTPQNASTA--------------------------- 419
++L++G D T +WD +Q P +++ A
Sbjct: 280 FILSAGVDKTTI-IWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQ 338
Query: 420 -SPVAQYQFHKGAITSISFNPLDESIIAVASEDNTVTLWDLSVEADDEEIKQQAAETKEL 478
P+ +Q H + +I ++P +++A S+D T+ +W + D + A KE+
Sbjct: 339 DRPIKTFQGHTNEVNAIKWDPTG-NLLASCSDDMTLKIWSMK---QDNCVHDLQAHNKEI 394
Query: 479 QQI 481
I
Sbjct: 395 YTI 397
Score = 51.6 bits (122), Expect = 3e-06
Identities = 54/204 (26%), Positives = 83/204 (40%), Gaps = 45/204 (22%)
Query: 284 GSVEGYANDWS--------------PII------KTGAMLSGDCSGQVFLTQRHTSKWIT 323
GS +G+A W+ PI K +LS + HT +
Sbjct: 243 GSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGE--- 299
Query: 324 DKQAFTVANNKSIEDLQWSRTESTVFASCGIDGYIRIWDTRSKKHKPAISVKASNTDVNV 383
KQ F + ++ D+ W + FASC D I + + + +P + + +VN
Sbjct: 300 AKQQFPFHSAPAL-DVDWQ--SNNTFASCSTDMCIHV--CKLGQDRPIKTFQGHTNEVNA 354
Query: 384 ISWSEKIGYLLASGDDDGTWGVWDLRQFTPQNASTASPVAQYQFHKGAITSISF------ 437
I W + G LLAS DD T +W ++Q + V Q H I +I +
Sbjct: 355 IKW-DPTGNLLASCSDDMTLKIWSMKQ--------DNCVHDLQAHNKEIYTIKWSPTGPG 405
Query: 438 --NPLDESIIAVASEDNTVTLWDL 459
NP ++A AS D+TV LWD+
Sbjct: 406 TNNPNANLMLASASFDSTVRLWDV 429
>Hs16445424 [Z] KOG0313 Microtubule binding protein YTM1 (contains WD40
repeats)
Length = 423
Score = 52.8 bits (125), Expect = 1e-06
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 30/211 (14%)
Query: 267 YQIPKQAKRPIHTVRNH-GSVEGYAND----------WSPIIKTGAMLSGDCSGQVF-LT 314
+ + + + +H R H GSV+ A D W ++K + + D ++ T
Sbjct: 172 WNVERNKVKALHCCRGHAGSVDSIAVDGSGTKFCSGSWDKMLKIWSTVPTDEEDEMEEST 231
Query: 315 QRHTSKWITDKQAFT-------VANNKSIEDLQWSRTESTVFASCGIDGYIRIWDTRSKK 367
R K T++ T + +++ + WS E AS D IR+WD S
Sbjct: 232 NRPRKKQKTEQLGLTRTPIVTLSGHMEAVSSVLWSDAEEICSASW--DHTIRVWDVGSGS 289
Query: 368 HKPAISVKASNTDVNVISWSEKIGYLLASGDDDGTWGVWDLRQFTPQNASTASPVAQYQF 427
K ++ N N IS+S + LASG D +WD P+ +
Sbjct: 290 LKSTLT---GNKVFNCISYSP-LCKRLASGSTDRHIRLWD-----PRTKDGSLVSLSLTS 340
Query: 428 HKGAITSISFNPLDESIIAVASEDNTVTLWD 458
H G +TS+ ++P E + S DN V LWD
Sbjct: 341 HTGWVTSVKWSPTHEQQLISGSLDNIVKLWD 371
>At2g41500 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 554
Score = 52.8 bits (125), Expect = 1e-06
Identities = 46/169 (27%), Positives = 63/169 (37%), Gaps = 55/169 (32%)
Query: 345 ESTVFASCGIDGYIRIWDTRSKKH--------KPAISVKASNTDVNVISWSEKIGYLLAS 396
+ + ASCG+D R+WD R+ + KP SV S GY LAS
Sbjct: 392 DGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPN-----------GYHLAS 440
Query: 397 GDDDGTWGVWDLRQ-----FTPQNASTASPV------------AQYQF------------ 427
G +D +WDLR P +A+ S V A Y
Sbjct: 441 GGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSL 500
Query: 428 ------HKGAITSISFNPLDESIIAVASEDNTVTLWDLSVEADDEEIKQ 470
H+ + S+ D S IA S D T+ LW S D++E K+
Sbjct: 501 VKSLAGHESKVASLDITA-DSSCIATVSHDRTIKLWTSSGNDDEDEEKE 548
>Hs5031729 [S] KOG0290 Conserved WD40 repeat-containing protein AN11
Length = 342
Score = 52.4 bits (124), Expect = 2e-06
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 17/159 (10%)
Query: 304 SGDCSGQVFLTQRHTSKWITDKQAFTVANNKSIEDLQWSRTES--TVFASCGIDGYIRIW 361
+G G+V L H + +A++K + D+ +SR +FAS G DG +R++
Sbjct: 152 TGQVLGRVNLVSGHVKTQL-------IAHDKEVYDIAFSRAGGGRDMFASVGADGSVRMF 204
Query: 362 DTRSKKHKPAISVKASNTDVNVISWSEKIGYLLASGDDDGTWGV-WDLRQFTPQNASTAS 420
D R +H I + + + W+++ LA+ DG V D+R +
Sbjct: 205 DLRHLEHSTIIYEDPQHHPLLRLCWNKQDPNYLATMAMDGMEVVILDVRV-------PCT 257
Query: 421 PVAQYQFHKGAITSISFNPLDESIIAVASEDNTVTLWDL 459
PVA+ H+ + I++ P I A++D+ +WD+
Sbjct: 258 PVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDI 296
>Hs15150805 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 522
Score = 52.4 bits (124), Expect = 2e-06
Identities = 52/196 (26%), Positives = 76/196 (38%), Gaps = 29/196 (14%)
Query: 284 GSVEGYANDWS--------------PII------KTGAMLSGDCSGQVFLTQRHTSKWIT 323
GS +G+A W+ PI K +LS + HT +
Sbjct: 253 GSYDGFARIWTENGNLASTLGQHKGPIFALKWNKKGNYVLSAGVDKTTIIWDAHTGE--- 309
Query: 324 DKQAFTVANNKSIEDLQWSRTESTVFASCGIDGYIRIWDTRSKKHKPAISVKASNTDVNV 383
KQ F + ++ D+ W + FASC D I + R P + + +VN
Sbjct: 310 AKQQFPFHSAPAL-DVDWQN--NMTFASCSTDMCIHV--CRLGCDHPVKTFQGHTNEVNA 364
Query: 384 ISWSEKIGYLLASGDDDGTWGVWDLRQFTPQNASTASPVAQYQFHKGAITSISFNPLDES 443
I W G LLAS DD T +W ++Q + A Y + NP
Sbjct: 365 IKWDPS-GMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSSI 423
Query: 444 IIAVASEDNTVTLWDL 459
++A AS D+TV LWD+
Sbjct: 424 MLASASFDSTVRLWDV 439
>At1g11160 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 974
Score = 52.4 bits (124), Expect = 2e-06
Identities = 48/160 (30%), Positives = 74/160 (46%), Gaps = 21/160 (13%)
Query: 302 MLSGDCSGQVFLTQRHTSKWITDKQAFTV--ANNKSIEDLQWSRTESTVFASCGIDGYIR 359
+L+G SG + L SK + +AFT +N ++E + AS D +R
Sbjct: 22 VLAGASSGVIKLWDLEESKMV---RAFTGHRSNCSAVEFHPFGE----FLASGSSDTNLR 74
Query: 360 IWDTRSKKHKPAISVKASNTDVNVISWSEKIGYLLASGDDDGTWGVWDLRQFTPQNASTA 419
+WDTR K + K ++ I +S G + SG D VWDL +
Sbjct: 75 VWDTRKKGCIQ--TYKGHTRGISTIEFSPD-GRWVVSGGLDNVVKVWDL--------TAG 123
Query: 420 SPVAQYQFHKGAITSISFNPLDESIIAVASEDNTVTLWDL 459
+ +++ H+G I S+ F+PL E ++A S D TV WDL
Sbjct: 124 KLLHEFKCHEGPIRSLDFHPL-EFLLATGSADRTVKFWDL 162
>At1g80710 [S] KOG4328 WD40 protein
Length = 516
Score = 52.0 bits (123), Expect = 2e-06
Identities = 36/111 (32%), Positives = 48/111 (42%), Gaps = 15/111 (13%)
Query: 351 SCGIDGYIRIWDTRSKKHKPAISVKASNTDVNVISWSEKIG--YLLASGDDDGTWGVWDL 408
S DG IR+ D S TD + S S++ L G D G + VWDL
Sbjct: 281 SSSYDGLIRLMDVEKSVFDLVYS-----TDEAIFSLSQRPNDEQSLYFGQDYGVFNVWDL 335
Query: 409 RQFTPQNASTASPVAQYQFHKGAITSISFNPLDESIIAVASEDNTVTLWDL 459
R V ++ H+ I SI FNP + ++A +S D T LWDL
Sbjct: 336 R--------AGKSVFHWELHERRINSIDFNPQNPHVMATSSTDGTACLWDL 378
>At1g61210 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 282
Score = 52.0 bits (123), Expect = 2e-06
Identities = 41/162 (25%), Positives = 62/162 (37%), Gaps = 39/162 (24%)
Query: 332 NNKSIEDLQWSRTESTVFASCGIDGYIRIWDTRSKKHKPAISVKASNTDVNVISWSEKIG 391
+ +++ + + E V A G I++WD K A + SN G
Sbjct: 87 HTSAVDSVAFDSAEVLVLAGAS-SGVIKLWDVEEAKMVRAFTGHRSNCSAVEF---HPFG 142
Query: 392 YLLASGDDDGTWGVWDLRQ------------------FTPQNASTASP------------ 421
LASG D +WD+R+ FTP S
Sbjct: 143 EFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLT 202
Query: 422 ----VAQYQFHKGAITSISFNPLDESIIAVASEDNTVTLWDL 459
+ +++FH+G I S+ F+PL E ++A S D TV WDL
Sbjct: 203 AGKLLHEFKFHEGPIRSLDFHPL-EFLLATGSADRTVKFWDL 243
>YDR142c [U] KOG0277 Peroxisomal targeting signal type 2 receptor
Length = 375
Score = 51.6 bits (122), Expect = 3e-06
Identities = 60/257 (23%), Positives = 100/257 (38%), Gaps = 32/257 (12%)
Query: 285 SVEGYANDWSPIIKTGAMLSGDCSGQVFLTQRHTSKWITDKQAFT--VANNKSIEDLQWS 342
S +G WSP+ K M ++ + I K++FT N + Q+S
Sbjct: 124 SWDGSIKIWSPLRKQSLMTLTPRPLEITKMVDPLNAIILKKKSFTGISKNRNCVYQAQFS 183
Query: 343 RTESTVFASCGIDGYIRIWDTR--SKKHKPAISVKASNTDVNVISWSEKIGYLLASGDDD 400
+ + SC + Y ++D R S K++ V S + +++ Y++A+G D
Sbjct: 184 PHDQNLVLSCSGNSYASLFDIRLPSGKNQNNFLVH-SGLEALTCDFNKYRPYVVATGGVD 242
Query: 401 GTWGVWDLRQFTPQNASTASPVAQYQFHKG------------AITSISFNPLDESIIAVA 448
+WD+R ++T Q H AI ++++P +I+ A
Sbjct: 243 NAIRIWDIRMLNKNESATIKRTVPGQLHNSSCINEIPNAHGLAIRKVTWSPHHSNILMSA 302
Query: 449 SEDNTVTLW-DLSVEADDEEIKQQAAETKE-----LQQIPPQLLFVHWQKEVKDVKWHKQ 502
S D T +W DLS + E K + + + Q + W W K
Sbjct: 303 SYDMTCRIWRDLSNDGAKETYKTNSTDATKGSIFNFTQHSEFVFGADWS------LWGK- 355
Query: 503 IPGCLVSTGTDG-LNVW 518
PG + ST DG L VW
Sbjct: 356 -PGYVASTAWDGNLFVW 371
>7296209 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 700
Score = 51.2 bits (121), Expect = 4e-06
Identities = 54/221 (24%), Positives = 93/221 (41%), Gaps = 29/221 (13%)
Query: 268 QIPKQAKRPIHTVRNHGSVEGYANDWSPIIKTGAMLSGDCSGQVF-LTQRHTS------K 320
+IP+ R +R H S E + W+P A SGD + +++ ++ +T+ +
Sbjct: 342 EIPESKAR---VLRGHES-EVFICAWNPSRDLLASGSGDSTARIWDMSDANTNSNQLVLR 397
Query: 321 WITDKQAFTVANNKSIEDLQWSRTESTVFASCGIDGYIRIWDTRSKKHKPAISVKASNTD 380
K V +NK + L W+ + ++ A+ DGY RIW T + A ++
Sbjct: 398 HCIQKGGAEVPSNKDVTSLDWN-CDGSLLATGSYDGYARIWKTDGRL---ASTLGQHKGP 453
Query: 381 VNVISWSEKIGYLLASGDDDGTWGVWDLRQFTPQNASTASPVAQYQFHKGAITSISFNPL 440
+ + W++ Y+L++G D T +WD AST Q+ FH + +
Sbjct: 454 IFALKWNKCGNYILSAGVDKTTI-IWD--------ASTGQCTQQFAFHSAPALDVDWQ-- 502
Query: 441 DESIIAVASEDNTVTLWDLSVEADDEEIKQQAAETKELQQI 481
A S D + + L V +E IK T E+ I
Sbjct: 503 TNQAFASCSTDQRIHVCRLGV---NEPIKTFKGHTNEVNAI 540
Score = 51.2 bits (121), Expect = 4e-06
Identities = 38/122 (31%), Positives = 55/122 (44%), Gaps = 5/122 (4%)
Query: 338 DLQWSRTESTVFASCGIDGYIRIWDTRSKKHKPAISVKASNTDVNVISWSEKIGYLLASG 397
D+ W ++ FASC D I + R ++P + K +VN I W + G LLAS
Sbjct: 498 DVDWQTNQA--FASCSTDQRIHV--CRLGVNEPIKTFKGHTNEVNAIKWCPQ-GQLLASC 552
Query: 398 DDDGTWGVWDLRQFTPQNASTASPVAQYQFHKGAITSISFNPLDESIIAVASEDNTVTLW 457
DD T +W + + + A Y + NP I+A AS D+TV LW
Sbjct: 553 SDDMTLKIWSMNRDRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLW 612
Query: 458 DL 459
D+
Sbjct: 613 DV 614
>YDR030c [R] KOG4155 FOG: WD40 repeat
Length = 506
Score = 50.8 bits (120), Expect = 5e-06
Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 20/210 (9%)
Query: 323 TDKQAFTVANNKSIEDLQWSRTESTVFASCGIDGYIRIWDTRSKKHKPAISV--KASNTD 380
TD +A + I L+W + ++ +F + D ++IWDT + I++ K + D
Sbjct: 185 TDSEASISHHKYGITTLKWYKADNGMFFTGSNDKTVKIWDTNRFEAVQDINLGYKINQID 244
Query: 381 VNVISWSEKIGYLLASGDDDGTWGVWDLRQFTPQNASTASPVAQYQFHKGAITSISFNPL 440
NV+ S LL +D + DLR T + TA + + I FNP+
Sbjct: 245 NNVVDDSS----LLVVASEDYYPRLIDLR--TMNSGVTALGMGNQTRMQSEILCCKFNPV 298
Query: 441 DESIIAVASEDNTVTLWDLSVEAD-DEEIKQQAAETKEL----QQIPPQLLFVHWQKEV- 494
E IIA + V LWDL + E+K+ K + + F Q +
Sbjct: 299 REQIIACGDMEGGVKLWDLRMRNRLYSELKRNKNRFKTINNDDNDDQSDVYFSSNQSKAH 358
Query: 495 ----KDVKWHKQIPGCLVSTGTDG-LNVWK 519
D+ W+ + L S G DG LNVW+
Sbjct: 359 LRCCSDIVWNSE-GSELCSVGMDGKLNVWR 387
>CE18578 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 331
Score = 50.8 bits (120), Expect = 5e-06
Identities = 37/125 (29%), Positives = 63/125 (49%), Gaps = 13/125 (10%)
Query: 335 SIEDLQWSRTESTVFASCGIDGYIRIWDTRSKKHKPAISVKASNTDVNVISWSEKIGYLL 394
++ DL+++ T+S+ SCG D +R+WD + A + VN + S + L+
Sbjct: 83 AVMDLKFT-TDSSSLVSCGTDKSVRVWDMET--GTCARRFRTHTDFVNAVHPSRRGVTLV 139
Query: 395 ASGDDDGTWGVWDLRQFTPQNASTASPVAQYQFHKGAITSISFNPLDESIIAVASEDNTV 454
AS DDGT V D+R T PV Y ++ T+++FN + +I+ DN +
Sbjct: 140 ASASDDGTCRVHDMR--------TKEPVKTYT-NRYQQTAVTFNDSSDQVIS-GGIDNVL 189
Query: 455 TLWDL 459
+WD+
Sbjct: 190 KVWDM 194
>Hs4757988 [R] KOG0645 WD40 repeat protein
Length = 339
Score = 50.1 bits (118), Expect = 8e-06
Identities = 39/145 (26%), Positives = 67/145 (45%), Gaps = 12/145 (8%)
Query: 339 LQWSRTESTVFASCGIDGYIRIWDTRSKKH--KPAISVKASNTDVNVISWSEKIGYLLAS 396
L W+ T+ ASCG D IRIW T K +S T V ++WS G LAS
Sbjct: 22 LAWNPA-GTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRT-VRKVAWS-PCGNYLAS 78
Query: 397 GDDDGTWGVWDLRQFTPQNASTASPVAQYQFHKGAITSISFNPLDESIIAVASEDNTVTL 456
D T +W +N V + H+ + S+++ P +++A S D +V +
Sbjct: 79 ASFDATTCIW------KKNQDDFECVTTLEGHENEVKSVAWAP-SGNLLATCSRDKSVWV 131
Query: 457 WDLSVEADDEEIKQQAAETKELQQI 481
W++ E + E + + T++++ +
Sbjct: 132 WEVDEEDEYECVSVLNSHTQDVKHV 156
>ECU05g1010 [R] KOG0302 Ribosome Assembly protein
Length = 338
Score = 50.1 bits (118), Expect = 8e-06
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 41/220 (18%)
Query: 308 SGQVFLTQR---HTSKWITDKQAFTVANNKSIEDLQWSRTESTVFA-SCGIDGYIRIWDT 363
SG VF T+ T+ W ++ + + S+E L + +F+ SC D I I D
Sbjct: 152 SGCVFGTRSGEVSTNDWKFNEVSTMSVHEDSVEGL--CHHDGMIFSGSC--DHSIGITDI 207
Query: 364 RSKKHKPAISVKASNTDVNVISWSEKIGYLLASGDDDGTWGVWDLRQFTPQNASTASPVA 423
RS + K +D+N + ++ Y LA GDD+GT + D+R + +
Sbjct: 208 RSGS---TVFRKRFGSDINAVDFNGD--YTLAFGDDEGTIRLMDIRNHS---------IE 253
Query: 424 QYQFHKGAITSISFNPLDESIIAVASEDNTVTLWDLSVEADDEEIKQQAAETKELQQIPP 483
+ HK I+ + + +S I + D V +WD+S++ ++
Sbjct: 254 EVTRHKTPISCLRWR---DSDILASGSDEQVCIWDMSLDPSED---------------LG 295
Query: 484 QLLFVH-WQKEVKDVKWHKQIPGCLVSTGTDGLNVWKTIS 522
LLFVH QK KDV + + +V+T DGL V+ IS
Sbjct: 296 YLLFVHQGQKFYKDVAFCRGNNDYVVTTSIDGLCVFYPIS 335
>CE23620 [R] KOG0266 WD40 repeat-containing protein
Length = 530
Score = 50.1 bits (118), Expect = 8e-06
Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 21/180 (11%)
Query: 293 WSPIIKTGAMLSGDCS-----------GQVFLTQRHTSKWIT-DKQAFTVANNKSIEDLQ 340
WS I+ T L+GD G++ T+R W D ++ ++ ++
Sbjct: 176 WS-ILDTAISLNGDLIAYGTWKDAVFVGKLDFTERQNITWFPIDLNGEPGRDHCAVFCVK 234
Query: 341 WSRTESTVFASCGIDGY-IRIWDTRSKKHKPAISVKASNTDVNVISWSEKIGYLLASGDD 399
+S + + CG Y I ++D ++ I V A DVN + +++ L+ S D
Sbjct: 235 FSDSSEQIV--CGTSQYSIHVFDVEQRRRIRTI-VNAHEDDVNSVCFADLGSNLIYSAGD 291
Query: 400 DGTWGVWDLRQFTPQNASTASPVAQYQFHKGAITSISFNPLDESIIAVASEDNTVTLWDL 459
DG VWD R ++ PV + H+ +T + + DE + S+D T+ +WDL
Sbjct: 292 DGLVKVWDKRAWSD---GDVEPVGVFAGHRDGVTHVD-SRQDERYLLSNSKDQTIKVWDL 347
>CE09086 [R] KOG0266 WD40 repeat-containing protein
Length = 571
Score = 50.1 bits (118), Expect = 8e-06
Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 21/180 (11%)
Query: 293 WSPIIKTGAMLSGDCS-----------GQVFLTQRHTSKWIT-DKQAFTVANNKSIEDLQ 340
WS I+ T L+GD G++ T+R W D ++ ++ ++
Sbjct: 217 WS-ILDTAISLNGDLIAYGTWKDAVFVGKLDFTERQNITWFPIDLNGEPGRDHCAVFCVK 275
Query: 341 WSRTESTVFASCGIDGY-IRIWDTRSKKHKPAISVKASNTDVNVISWSEKIGYLLASGDD 399
+S + + CG Y I ++D ++ I V A DVN + +++ L+ S D
Sbjct: 276 FSDSSEQIV--CGTSQYSIHVFDVEQRRRIRTI-VNAHEDDVNSVCFADLGSNLIYSAGD 332
Query: 400 DGTWGVWDLRQFTPQNASTASPVAQYQFHKGAITSISFNPLDESIIAVASEDNTVTLWDL 459
DG VWD R ++ PV + H+ +T + + DE + S+D T+ +WDL
Sbjct: 333 DGLVKVWDKRAWSD---GDVEPVGVFAGHRDGVTHVD-SRQDERYLLSNSKDQTIKVWDL 388
>At2g47990 [S] KOG0310 Conserved WD40 repeat-containing protein
Length = 530
Score = 50.1 bits (118), Expect = 8e-06
Identities = 27/123 (21%), Positives = 60/123 (47%), Gaps = 10/123 (8%)
Query: 343 RTESTVFASCGIDGYIRIWDTRSKKHKPAISVKASNTDVNVISWSEKIGYLLASGDDDGT 402
R++ +FA+C + G ++++D K+ ++++ + + + + L SG DDG
Sbjct: 102 RSDGALFAACDLSGVVQVFDI--KERMALRTLRSHSAPARFVKYPVQDKLHLVSGGDDGV 159
Query: 403 WGVWDLRQFTPQNASTASPVAQYQFHKGAITSISFNPLDESIIAVASEDNTVTLWDLSVE 462
WD+ + A+ ++ HK + +P+++S++ S D+TV +WD V
Sbjct: 160 VKYWDV--------AGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWDARVH 211
Query: 463 ADD 465
+
Sbjct: 212 TSN 214
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.312 0.128 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,945,404
Number of Sequences: 60738
Number of extensions: 1153639
Number of successful extensions: 5973
Number of sequences better than 1.0e-05: 65
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 5553
Number of HSP's gapped (non-prelim): 206
length of query: 523
length of database: 30,389,216
effective HSP length: 111
effective length of query: 412
effective length of database: 23,647,298
effective search space: 9742686776
effective search space used: 9742686776
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)